niman Posted October 10, 2023 Report Posted October 10, 2023 (edited) USA/NC-CDC-LC1063242/2023 North Carolina 9/29/23 collection Spike ins16MPLF, V483del NSP2 F319L NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 Edited October 10, 2023 by niman
niman Posted October 10, 2023 Author Report Posted October 10, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=35.8031771321393%2C-79.77147941601712&z=9
niman Posted October 11, 2023 Author Report Posted October 11, 2023 isolate SARS-CoV-2/Human/USA/NC-CDC-LC1063242/2023 collected by Laboratory Corporation of America collection date 2023-09-29 isolation source Nasal Swabs geographic location USA: North Carolina host Homo sapiens host disease COVID-19 host sex female host age 72 collection device Nasal Swabs collection method Nasal Swabs purpose of sequencing baseline surveillance (random sampling) host_race Unknown diagnostic_gene_name_1 N1 gene diagnostic_pcr_protocol_1 Labcorp LDT diagnostic_pcr_Ct_value_1 21.428 diagnostic_gene_name_2 N2 gene diagnostic_pcr_protocol_2 Labcorp LDT diagnostic_pcr_Ct_value_2 19.123 diagnostic_gene_name_3 RP gene diagnostic_pcr_protocol_3 Labcorp LDT diagnostic_pcr_Ct_value_3 34.179 lineage/clade name BA.2.86 Submission CDC-OAMD; 2023-10-10 Accession: SAMN37737804 ID: 37737804 https://www.ncbi.nlm.nih.gov/biosample/37737804
niman Posted October 11, 2023 Author Report Posted October 11, 2023 USA/NC-CDC-LC1063242/2023 North Carolina 9/29/23 collection 72F Spike ins16MPLF, V483del NSP2 F319L T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1
niman Posted October 11, 2023 Author Report Posted October 11, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=35.859050002097455%2C-79.47243308593748&z=10
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