niman Posted March 5, 2020 Report Share Posted March 5, 2020 (edited) Two more sequences from King Co were released tonight at GISAID. One, BetaCoV/USA/WA-S2/2020, was released by the Seattle Flu study, and the other, BetaCoV/USA/WA6-UW3/2020, was release by the University of Washington. Like the sequence released earlier, BetaCoV/USA/WA4-UW2/2020, they match the two Snohomish sequences (from 35M and 17M) via the two polymorphism that define the lineage (C8782T and T28144C) and the rare polymorphism (C18060T). However, all three of the sequences released today also have two unique polymorphisms (C17747T and A17858G) indicating they are all from patients linked to the long term care facility (LTCF) in Kirkland, Washington and their infections were due to a single introduction Edited March 6, 2020 by niman Link to comment Share on other sites More sharing options...
niman Posted March 5, 2020 Author Report Share Posted March 5, 2020 (edited) Virus detail Virus name: BetaCoV/USA/WA-S2/2020 Accession ID: EPI_ISL_413456 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-02-20 Location: North America / USA / Washington / King County Host: Human Institute information Edited March 6, 2020 by niman Link to comment Share on other sites More sharing options...
niman Posted March 5, 2020 Author Report Share Posted March 5, 2020 (edited) Virus detail Virus name: BetaCoV/USA/WA6-UW3/2020 Accession ID: EPI_ISL_413457 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-02-29 Location: North America / USA / Washington Host: Human Institute information Edited March 6, 2020 by niman Link to comment Share on other sites More sharing options...
niman Posted March 5, 2020 Author Report Share Posted March 5, 2020 (edited) Virus detail Virus name: BetaCoV/USA/WA4-UW2/2020 Accession ID: EPI_ISL_413455 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-02-28 Location: North America / USA / Washington Host: Human Institute information Edited March 6, 2020 by niman Link to comment Share on other sites More sharing options...
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