Northeast Iowa SARS CoV2 Sequences Are The Italian Lineage

[niman]

Kabara Cancer Research Institute in La Crosse WI has recently released (at GISAID) 27 SARS CoV2 sequences (collection dates 3/25-4/26) from regional counties in WI, MN, IA. All were the Italian lineage (Clade G). 15 sequences were from patients in northeast Iowa (Allamakee and Winneshiek Cos)

Edited May 6, 2020 by niman

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01854/2020
Accession ID:	EPI_ISL_435402
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-26
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01591/2020
Accession ID:	EPI_ISL_435399
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-23
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01551/2020
Accession ID:	EPI_ISL_435398
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-22
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01535/2020
Accession ID:	EPI_ISL_435397
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-21
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01534/2020
Accession ID:	EPI_ISL_435396
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-22
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01316/2020
Accession ID:	EPI_ISL_429848
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-06
Location:	North America / USA / Iowa / Winneshiek County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01159/2020
Accession ID:	EPI_ISL_429847
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-16
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01158/2020
Accession ID:	EPI_ISL_429846
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-16
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-01047/2020
Accession ID:	EPI_ISL_429845
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-14
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-00857/2020
Accession ID:	EPI_ISL_429844
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-09
Location:	North America / USA / Iowa
Host:	Human
Additional location information:	Allamakee County

[niman]

Virus name:	hCoV-19/USA/WI-GMF-00928/2020
Accession ID:	EPI_ISL_426161
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-06
Location:	North America / USA / Iowa
Host:	Human
Additional location information:	Allamakee County

[niman]

Virus name:	hCoV-19/USA/WI-GMF-00921/2020
Accession ID:	EPI_ISL_426160
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-03
Location:	North America / USA / Iowa / Allamakee County
Host:	Human

[niman]

Virus name:	hCoV-19/USA/WI-GMF-00744/2020
Accession ID:	EPI_ISL_422462
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-04-03
Location:	North America / USA / Iowa / Winneshiek County
Host:	Human