niman Posted February 20, 2017 Report Share Posted February 20, 2017 WHO Chinese National Influenza Center has released a full H7N9 environment sample, A/Environment/Guangdong/C16283222/2016, collected on November 7, 2016 with polybasic cleavage site KRKRTAR. Sequences are wild type/avian for H7 226, PB2 627 N9 292. Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Isolate name: A/Environment/Guangdong/C16283222/2016 Isolate ID: EPI_ISL_249310 Passage details/history: E1 Type: A / H7N9 Lineage: Sample information Collection date: 2016-11-07 Host Environment Additional host information: Location: China Additional location information: Guangdong Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: WHO Chinese National Influenza Center Sample ID given by the submitting laboratory: Authors: Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Environment/Guangdong/C16283222/2016-PB2 2280 EPI919612 PB1 A/Environment/Guangdong/C16283222/2016-PB1 2274 EPI919613 PA A/Environment/Guangdong/C16283222/2016-PA 2151 EPI919611 HA A/Environment/Guangdong/C16283222/2016-HA 1695 EPI919615 NP A/Environment/Guangdong/C16283222/2016-NP 1497 EPI919608 NA A/Environment/Guangdong/C16283222/2016-NA 1398 EPI919614 MP A/Environment/Guangdong/C16283222/2016-MP 982 EPI919610 NS A/Environment/Guangdong/C16283222/2016-NS 838 EPI919609 Submitter information Submitter: Yang, Lei Submission Date: 2017-02-20 Last modifier: Yang, Lei Last modified: 2017-02-20 Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919615 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 4 (HA) 3131.2 0.000000e+00 1695/1695 (100%) EPI919623 A/Environment/Guangdong/C16283277/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3125.7 0.000000e+00 1694/1695 (99%) EPI919625 A/Environment/Guangdong/C16283219/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3120.1 0.000000e+00 1693/1695 (99%) EPI919627 A/Environment/Guangdong/C162811110/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3114.6 0.000000e+00 1692/1695 (99%) EPI919599 A/Guangdong/17SF006/2017 (A/H7N9) segment 4 (HA) 3092.4 0.000000e+00 1688/1695 (99%) EPI918736 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 4 (HA) 3092.4 0.000000e+00 1688/1695 (99%) EPI919621 A/Environment/Guangdong/KGZ4048/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3070.3 0.000000e+00 1684/1695 (99%) EPI919619 A/Environment/Guangdong/KGZ4068/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3070.3 0.000000e+00 1684/1695 (99%) EPI919617 A/Environment/Guangdong/KGZ4075/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3070.3 0.000000e+00 1684/1695 (99%) EPI919607 A/Guangdong/17SF003/2016 (A/H7N9) segment 4 (HA) 3070.3 0.000000e+00 1684/1695 (99%) EPI917065 A/Taiwan/1/2017 (A/H7N9) segment 4 (HA) 3053.6 0.000000e+00 1681/1695 (99%) EPI507710 A/turkey/Italy/4828/1999 (A/H7N1) segment 4 (HA) 2350.1 0.000000e+00 1562/1703 (91%) EPI68427 A/turkey/Italy/4708/1999 (A/H7N1) segment 4 (HA) 2350.1 0.000000e+00 1562/1703 (91%) EPI63296 A/quail/Italy/396/2000 (A/H7N1) segment 4 (HA) 2346.4 0.000000e+00 1562/1704 (91%) EPI507734 A/turkey/Italy/4756/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI507718 A/turkey/Italy/4827/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI507702 A/turkey/Italy/4618/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI505580 A/chicken/Italy/4845/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107393 A/ostrich/Italy/984/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107376 A/ostrich/Italy/984/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107357 A/chicken/Italy/5093/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107338 A/chicken/Italy/5093/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI69101 A/turkey/Italy/4617/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI69063 A/chicken/Italy/4789/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI68218 A/turkey/Italy/1084/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI68199 A/chicken/Italy/2335/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI63258 A/chicken/Italy/4746/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI60747 A/duck/Italy/551/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI60386 A/turkey/Italy/4580/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI58714 A/ostrich/Italy/1038/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12992 A/Turkey/Italy/335/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12990 A/Turkey/Italy/13468/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12984 A/Turkey/Italy/13467/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12982 A/Chicken/Italy/13307/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12980 A/chicken/Italy/13474/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12884 A/turkey/Italy/12598/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI505858 A/guinea fowl/Italy/1766/2000 (A/H7N1) segment 4 (HA) 2340.8 0.000000e+00 1561/1704 (91%) EPI651420 A/chicken/Italy/445 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI505601 A/turkey/Italy/5005/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI505582 A/chicken/Italy/4911/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI505581 A/turkey/Italy/4906/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI353345 A/chicken/Italy/445/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI242904 A/chicken/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI242903 A/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI69044 A/quail/Italy/4992/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI13148 A/chicken/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI505640 A/turkey/Italy/140/2000 (A/H7N1) segment 4 (HA) 2337.1 0.000000e+00 1560/1704 (91%) EPI505851 A/chicken/Italy/1730/2000 (A/H7N1) segment 4 (HA) 2335.3 0.000000e+00 1560/1704 (91%) EPI505603 A/chicken/Italy/5074/1999 (A/H7N1) segment 4 (HA) 2335.3 0.000000e+00 1557/1699 (91%) EPI507726 A/turkey/Italy/4749/1999 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI505811 A/chicken/Italy/1651/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1559/1703 (91%) EPI505781 A/chicken/Italy/933/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1558/1702 (91%) EPI505703 A/chicken/Italy/797/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI238415 A/Turkey/Italy/13489/99 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI63277 A/guinea fowl/Italy/155/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1561/1705 (91%) EPI43057 A/chicken/Italy/1285/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1559/1703 (91%) EPI505875 A/quail/Italy/1764/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1559/1704 (91%) EPI505809 A/goose/Italy/1310/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1559/1704 (91%) EPI60690 A/turkey/Italy/2984/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1561/1706 (91%) EPI505779 A/guineafowl/Italy/918/2000 (A/H7N1) segment 4 (HA) 2327.9 0.000000e+00 1560/1705 (91%) EPI68522 A/pekin duck/Italy/1848/2000 (A/H7N1) segment 4 (HA) 2327.9 0.000000e+00 1559/1704 (91%) EPI12988 A/Chicken/Italy/267/00 (A/H7N1) segment 4 (HA) 2327.9 0.000000e+00 1559/1704 (91%) EPI505861 A/guinea fowl/Italy/1847/2000 (A/H7N1) segment 4 (HA) 2324.2 0.000000e+00 1558/1704 (91%) EPI505702 A/turkey/Italy/720/2000 (A/H7N1) segment 4 (HA) 2324.2 0.000000e+00 1555/1699 (91%) EPI107319 A/ostrich/Italy/2332/00 (A/H7N1) segment 4 (HA) 2324.2 0.000000e+00 1558/1704 (91%) EPI107300 A/ostrich/Italy/2332/00 (A/H7N1) segment 4 (HA) 2324.2 0.000000e+00 1558/1704 (91%) EPI319892 A/Netherlands/086/03 (A/H7N7) segment 4 (HA) 2322.4 0.000000e+00 1554/1698 (91%) EPI294949 A/chicken/Netherlands/03008344/03(H7N7) (A/H7N7) segment 4 (HA) 2322.4 0.000000e+00 1556/1701 (91%) EPI290279 A/chicken/Netherlands/03005432/03(H7N7) (A/H7N7) segment 4 (HA) 2322.4 0.000000e+00 1556/1701 (91%) EPI237858 A/chicken/Netherlands/03009938/03 (A/H7N7) segment 4 (HA) 2322.4 0.000000e+00 1556/1701 (91%) EPI237816 A/chicken/Netherlands/03010351/03 (A/H7N7) segment 4 (HA) 2322.4 0.000000e+00 1556/1701 (91%) EPI505605 A/chicken/Italy/5086/1999 (A/H7N1) segment 4 (HA) 2320.5 0.000000e+00 1556/1701 (91%) EPI505604 A/chicken/Italy/5079/1999 (A/H7N1) segment 4 (HA) 2320.5 0.000000e+00 1553/1697 (91%) EPI294973 A/chicken/Netherlands/03008200/03(H7N7) (A/H7N7) segment 4 (HA) 2320.5 0.000000e+00 1555/1700 (91%) EPI294958 A/chicken/Netherlands/03008374/03(H7N7) (A/H7N7) segment 4 (HA) 2320.5 0.000000e+00 1555/1700 (91%) EPI237855 A/chicken/Netherlands/03009127/03 (A/H7N7) segment 4 (HA) 2320.5 0.000000e+00 1555/1700 (91%) EPI505693 A/chicken/Italy/501/2000 (A/H7N1) segment 4 (HA) 2318.7 0.000000e+00 1551/1695 (91%) EPI304486 A/chicken/belgium/06601/2003 (A/H7N7) segment 4 (HA) 2318.7 0.000000e+00 1554/1699 (91%) EPI319946 A/Netherlands/295/03 (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1553/1698 (91%) EPI304477 A/chicken/belgium/06383/2003 (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI304468 A/chicken/belgium/06175/2003 (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI295048 A/chicken/Netherlands/03013833/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI295045 A/chicken/Netherlands/03012010/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI295042 A/chicken/Netherlands/03012012/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI295024 A/chicken/Netherlands/03008331/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI294976 A/chicken/Netherlands/03009080/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI294952 A/chicken/Netherlands/03008381/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI294910 A/chicken/Netherlands/03002974/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290444 A/chicken/Netherlands/03012785/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290438 A/chicken/Netherlands/03012011/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290435 A/chicken/Netherlands/03011061/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290432 A/turkey/Netherlands/03010737/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290426 A/turkey/Netherlands/03010495/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290381 A/chicken/Netherlands/03009831/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290285 A/chicken/Netherlands/03003441/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290273 A/chicken/Netherlands/03008059/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290228 A/chicken/Netherlands/03003325/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290225 A/chicken/Netherlands/03003403/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI290189 A/chicken/Netherlands/03002994/03(H7N7) (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) EPI237887 A/turkey/Netherlands/03010821/03 (A/H7N7) segment 4 (HA) 2316.8 0.000000e+00 1555/1701 (91%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919614 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI919626 A/Environment/Guangdong/C162811110/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%) EPI919624 A/Environment/Guangdong/C16283219/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%) EPI919622 A/Environment/Guangdong/C16283277/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%) EPI919598 A/Guangdong/17SF006/2017 (A/H7N9) segment 6 (NA) 2555.0 0.000000e+00 1393/1398 (99%) EPI918738 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 6 (NA) 2549.5 0.000000e+00 1392/1398 (99%) EPI919620 A/Environment/Guangdong/KGZ4048/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%) EPI919616 A/Environment/Guangdong/KGZ4075/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%) EPI919606 A/Guangdong/17SF003/2016 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%) EPI919618 A/Environment/Guangdong/KGZ4068/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2523.6 0.000000e+00 1387/1398 (99%) EPI627232 A/Fujian/23/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627384 A/Guangdong/02497/2014 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627216 A/Fujian/25/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627024 A/Guangdong/15SF027/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627000 A/Guangdong/15SF080/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI769577 A/Fujian/16/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628807 A/Fujian/27/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628695 A/Guangdong/15SF055/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627312 A/Fujian/8/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627296 A/Fujian/19/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627264 A/Guangdong/15SF021/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627104 A/Fujian/17/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627048 A/Guangdong/15SF081/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI580389 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI580381 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI566130 A/Fujian/09273/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI769569 A/Fujian/10/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628687 A/Guangdong/15SF054/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628655 A/Environment/Hunan/20986/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628631 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628583 A/Environment/Anhui/33248/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627256 A/Fujian/7/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627224 A/Fujian/24/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627120 A/Guangdong/15SF030/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627112 A/Guangdong/15SF043/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627096 A/Jiangsu/19758/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627040 A/Fujian/6/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627008 A/Jiangsu/19757/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI566083 A/Guizhou/03240/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI683029 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628743 A/Anhui/33224/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628663 A/Anhui/33227/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628639 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628623 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628591 A/Environment/Anhui/33240/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628575 A/Environment/Anhui/33250/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627472 A/Fujian/1/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627456 A/Fujian/3/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627304 A/Fujian/11/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627168 A/Zhejiang/4/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627088 A/Hunan/19763/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627080 A/Hunan/19762/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI692616 A/Huai'an/002/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI628823 A/Zhejiang/10/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI628775 A/Zhejiang/7/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627464 A/Fujian/2/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627288 A/Fujian/20/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627192 A/Guangdong/15SF020/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI729461 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI692626 A/chicken/Huai'an/003/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI683028 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI683027 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI628751 A/Anhui/33225/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI628727 A/Anhui/33228/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI628607 A/Environment/Anhui/39280/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593638 A/chicken/Jiangxi/19463/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593625 A/chicken/Jiangxi/19426/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593383 A/chicken/Jiangxi/18008/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592610 A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592594 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592579 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592570 A/chicken/Jiangxi/13540/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592534 A/chicken/Jiangxi/13526/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592526 A/chicken/Jiangxi/13525/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592517 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592510 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592486 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592462 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592283 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592246 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI521919 A/Taiwan/2/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627480 A/Fujian/17/2014 (A/H7N9) segment 6 (NA) 2479.3 0.000000e+00 1380/1399 (98%) EPI729453 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI707902 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI656473 A/GD-92/2015/H7N9/2015-02-26 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1364/1375 (99%) EPI628567 A/Anhui/40095/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI627919 A/Xinjiang/73030/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI627911 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI627440 A/Anhui/01887/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI627240 A/Fujian/21/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI627160 A/Zhejiang/3/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI593583 A/chicken/Jiangxi/18524/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI593543 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI593453 A/chicken/Jiangxi/18470/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI593400 A/chicken/Jiangxi/18035/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI593132 A/chicken/Jiangxi/14502/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI592276 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI707983 A/chicken/Shanghai/S3086/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1379/1399 (98%) EPI707982 A/chicken/Shanghai/S3085/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1379/1399 (98%) EPI707981 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1379/1399 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919610 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI682977 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI681159 A/chicken/Zhejiang/727192/2014 (A/H9N2) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI919594 A/Guangdong/17SF006/2017 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI918739 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI682978 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI628747 A/Anhui/33225/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627260 A/Guangdong/15SF021/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627212 A/Fujian/25/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627132 A/Zhejiang/1/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627108 A/Guangdong/15SF043/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627044 A/Guangdong/15SF081/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627012 A/Jiangsu/18828/2014 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593614 A/chicken/Jiangxi/18527/2014 (A/H0) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593576 A/chicken/Jiangxi/18523/2014 (A/H0) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593551 A/chicken/Jiangxi/18515/2014 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593513 A/chicken/Jiangxi/18491/2014 (A/H0) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593479 A/chicken/Jiangxi/18483/2014 (A/H0) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593472 A/chicken/Jiangxi/18482/2014 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593430 A/chicken/Jiangxi/18466/2014 (A/H0) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI593408 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI566071 A/Jiangsu/06306/2014 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI895154 A/chicken/Ganzhou/GZ50/2015 (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI888055 A/Anhui/60935/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI888047 A/Anhui/60934/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI888039 A/Anhui/60933/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI888031 A/Anhui/60931/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI888015 A/Anhui/60929/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI888007 A/Anhui/60928/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI887959 A/Jiangsu/60450/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI887703 A/Zhejiang/7/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI846042 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI838162 A/chicken/Jiangsu/SIC42/2015 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI838159 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI833717 A/Fujian/3/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI769578 A/Fujian/16/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI769570 A/Fujian/10/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI764796 A/chicken/Beijing/0331/2013 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI740733 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI729782 A/chicken/Shanghai/15/2015 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI729462 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI729454 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI682985 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI681155 A/chicken/Zhejiang/3C34/2014 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI680963 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI680962 A/chicken/Zhejiang/C71921/2013 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI628811 A/Zhejiang/11/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI628555 A/Anhui/40094/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627308 A/Fujian/8/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627292 A/Fujian/19/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627252 A/Fujian/7/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627148 A/Zhejiang/34/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627140 A/Zhejiang/35/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593441 A/chicken/Jiangxi/18468/2014 (A/H0) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI583126 A/chicken/Shaoxing/5186/2013 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI566126 A/Fujian/09273/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI531804 A/Taiwan/2/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI529239 A/wild chicken/Shanghai/C1/2014 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI919602 A/Guangdong/17SF003/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI917068 A/Taiwan/1/2017 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI888023 A/Anhui/60932/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI887983 A/Anhui/60927/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI887887 A/Jiangsu/60461/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI887879 A/Jiangsu/60462/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI887863 A/Jiangsu/60465/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI887799 A/Zhejiang/6/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI846034 A/chicken/Anhui/AH120/2015 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI838148 A/chicken/Shandong/SIC24/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI769642 A/Fujian/22/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI769586 A/Fujian/18/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI682986 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI682983 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI682982 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI681154 A/chicken/Zhejiang/3C28/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI680978 A/chicken/Zhejiang/C58/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI680959 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI680948 A/pigeon/Zhejiang/P5/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI680947 A/pigeon/Zhejiang/P4/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI639590 A/chicken/Hangzhou/174/2013 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628787 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628779 A/Shandong-Taian/01/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628675 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628667 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628603 A/Environment/Anhui/39280/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628563 A/Anhui/40095/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628547 A/Environment/Hunan/39719/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628363 A/Zhejiang/3/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628211 A/Fujian/7/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628171 A/Fujian/11/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628163 A/Fujian/12/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627915 A/Xinjiang/73030/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627827 A/Xinjiang/75802/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627436 A/Anhui/01887/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627356 A/Fujian/5/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627220 A/Fujian/24/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627156 A/Zhejiang/3/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627100 A/Fujian/17/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI621117 A/chicken/Quzhou/2/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI602002 A/black chicken/Jiangxi/10139/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI601992 A/black chicken/Jiangxi/10136/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919612 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI833710 A/Fujian/3/2016 (A/H7N9) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI740735 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 1 (PB2) 4128.4 0.000000e+00 2265/2280 (99%) EPI888041 A/Anhui/60933/2016 (A/H7N9) segment 1 (PB2) 4102.5 0.000000e+00 2260/2280 (99%) EPI888049 A/Anhui/60934/2016 (A/H7N9) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI887985 A/Anhui/60927/2016 (A/H7N9) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI837991 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI887801 A/Zhejiang/6/2016 (A/H7N9) segment 1 (PB2) 4093.3 0.000000e+00 2258/2280 (99%) EPI888057 A/Anhui/60935/2016 (A/H7N9) segment 1 (PB2) 4087.8 0.000000e+00 2257/2280 (98%) EPI888017 A/Anhui/60929/2016 (A/H7N9) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI888009 A/Anhui/60928/2016 (A/H7N9) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI681055 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI888073 A/Anhui/60926/2016 (A/H7N9) segment 1 (PB2) 4082.2 0.000000e+00 2256/2280 (98%) EPI888033 A/Anhui/60931/2016 (A/H7N9) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI888001 A/Anhui/60925/2016 (A/H7N9) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI654471 A/GD-MZ_79/H9N2/2015-02-10 (A/H9N2) segment 1 (PB2) 4078.5 0.000000e+00 2254/2277 (98%) EPI888025 A/Anhui/60932/2016 (A/H7N9) segment 1 (PB2) 4076.7 0.000000e+00 2255/2280 (98%) EPI729799 A/chicken/Shanghai/06/2015 (A/H9N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%) EPI861132 A/Environment/Jiangxi/24429/2014 (A/H9N6) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI681056 A/chicken/Zhejiang/925159/2014 (A/H9N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI681054 A/chicken/Zhejiang/925122/2014 (A/H9N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI681044 A/chicken/Zhejiang/3C28/2014 (A/H9N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI681043 A/chicken/Zhejiang/3C14/2014 (A/H9N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI602186 A/chicken/Jiangxi/14512/2014 (A/H10N6) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI592582 A/chicken/Jiangxi/13544/2014 (A/H7N9) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI593126 A/chicken/Jiangxi/14502/2014 (A/H0) segment 1 (PB2) 4054.5 0.000000e+00 2251/2280 (98%) EPI683203 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%) EPI683202 A/duck/Wenzhou/YJYF24/2015 (A/H7N9) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%) EPI593517 A/chicken/Jiangxi/18500/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI593444 A/chicken/Jiangxi/18470/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI917062 A/Taiwan/1/2017 (A/H7N9) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI837976 A/chicken/Zhejiang/SIC30/2014 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI683199 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 1 (PB2) 4028.7 0.000000e+00 2244/2280 (98%) EPI683198 A/duck/Wenzhou/RAQL10/2015 (A/H7N9) segment 1 (PB2) 4028.7 0.000000e+00 2244/2280 (98%) EPI683194 A/chicken/Wuhan/JXQL01/2015 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI576620 A/environment/Shanghai/PD-JZ-01/2014 (A/H7N9) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI683197 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI837970 A/chicken/Zhejiang/SIC32/2014 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI681047 A/chicken/Zhejiang/77082/2014 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2247/2281 (98%) EPI627126 A/Zhejiang/36/2014 (A/H7N9) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599563 A/chicken/Jiangxi/29075/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI596741 A/chicken/Jiangxi/30801/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI658492 A/chicken/Jiangxi/12.05 NCNP006/2014(H5N6) (A/H5N6) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI657599 A/chicken/Jiangxi/12.05 NCDZT009/2014(H5N6) (A/H5N6) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI657551 A/chicken/Jiangxi/12.05 NCDZT0020/2014(H5N6) (A/H5N6) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI601947 A/chicken/Jiangxi/1208/2014 (A/H0) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI683191 A/chicken/Wenzhou/YHQL04/2014 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2245/2281 (98%) EPI657591 A/chicken/Jiangxi/12.05 NCDZT007/2014(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI657567 A/chicken/Jiangxi/12.05 NCDZT0031/2014(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI657543 A/chicken/Jiangxi/12.05 NCDZT0012/2014(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI681042 A/chicken/Zhejiang/3C9/2014 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI657207 A/environment/JiangXi/02.10 NCNP0019/2015(H5N6) (A/H5N6) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI654374 A/Environment/GD-MZ_499/H9N2/2014-6 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2242/2277 (98%) EPI627198 A/Guangdong/15SF017/2015 (A/H7N9) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI602287 A/duck/Jiangxi/36501/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI602280 A/duck/Jiangxi/36489/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI601497 A/chicken/Jiangxi/36278/2013 (A/H0) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI599674 A/chicken/Jiangxi/1202/2014 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI599584 A/chicken/Jiangxi/29117/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI530521 A/Environment/Jiangxi/20934/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI661524 A/chicken/Jiangxi/01.14 NCJD125-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI657583 A/chicken/Jiangxi/12.05 NCDZT0040/2014(H5N6) (A/H5N6) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI627246 A/Fujian/14/2015 (A/H7N9) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI657887 A/chicken/Jiangxi/04.01 NCDZT0203-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI656303 A/GD-17/2015/H7N9/2015-01-11 (A/H7N9) segment 1 (PB2) 4006.5 0.000000e+00 2241/2277 (98%) EPI654441 A/Environment/GD-PY_33/H9N2/2014-9 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2241/2277 (98%) EPI654379 A/Environment/GD-MZ_509/H9N2/2014-6 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2241/2277 (98%) EPI654238 A/Environment/GD-PY_776/H9N2/2014-10 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2241/2277 (98%) EPI654211 A/Environment/GD-PY_716/H9N2/2014-1 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2241/2277 (98%) EPI626982 A/Jiangsu/22184/2015 (A/H7N9) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI602361 A/duck/Jiangxi/36487/2013 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI601841 A/chicken/Jiangxi/31860/2013 (A/H0) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI664498 A/chicken/Jiangxi/04.01 NCDZT0048-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI658260 A/environment/Jiangxi/05.07 NCJD0052C/2015(H5N6) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI658156 A/Pigeon/Jiangxi/04.01 NCDZT0353-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI658148 A/Pigeon/Jiangxi/04.01 NCDZT0352-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI657903 A/chicken/Jiangxi/04.01 NCDZT0206-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI657879 A/chicken/Jiangxi/04.01 NCDZT0192-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI657559 A/chicken/Jiangxi/12.05 NCDZT0021/2014(H5N6) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI656903 A/environment/Jiangxi/02.10 NCDZT009/2015(H5N6) (A/H5N6) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601487 A/chicken/Jiangxi/36274/2013 (A/H0) segment 1 (PB2) 4002.8 0.000000e+00 2242/2280 (98%) EPI895219 A/chicken/Taishun/TS12/2016 (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI657839 A/chicken/Jiangxi/04.01 NCJD0146-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI657319 A/chicken/Jiangxi/04.01 NCDZT0040-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI657183 A/environment/Jiangxi/02.10 NCDZT0018/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI656895 A/Pigeon/Jiangxi/02.10 NCDZT0017-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI654418 A/Air/GD-PY_19/H9N2/2014-8 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2240/2277 (98%) EPI628733 A/Anhui/33223/2015 (A/H7N9) segment 1 (PB2) 4001.0 0.000000e+00 2243/2281 (98%) EPI628661 A/Anhui/33227/2015 (A/H7N9) segment 1 (PB2) 4001.0 0.000000e+00 2243/2281 (98%) EPI583803 A/chicken/Shaoxing/5498/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2243/2281 (98%) EPI661548 A/chicken/Jiangxi/02.05 YGYXG035-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI661084 A/chicken/Jiangxi/01.14 NCJD181-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI660860 A/environment/Jiangxi/01.14 NCJD005/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI658220 A/chicken/Jiangxi/04.01 NCDZT0042-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI657951 A/chicken/Jiangxi/04.01 NCDZT0292-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI657943 A/chicken/Jiangxi/04.01 NCDZT0291-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI657927 A/chicken/Jiangxi/04.01 NCDZT0279-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI657823 A/chicken/Jiangxi/04.01 NCJD0010-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI657191 A/environment/Jiangxi/02.10 NCDZT018/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI656887 A/environment/Jiangxi/02.10 NCDZT023/2015(H5N6) (A/H5N6) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919613 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI627047 A/Guangdong/15SF081/2015 (A/H7N9) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI656456 A/GD-81/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4084.1 0.000000e+00 2251/2271 (99%) EPI628630 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI627383 A/Guangdong/02497/2014 (A/H7N9) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI627239 A/Fujian/21/2015 (A/H7N9) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI627119 A/Guangdong/15SF030/2015 (A/H7N9) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI627215 A/Fujian/25/2015 (A/H7N9) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI656352 A/GD-30/2015/H7N9/2015-01-22 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2250/2271 (99%) EPI627471 A/Fujian/1/2015 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI627231 A/Fujian/23/2015 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI627023 A/Guangdong/15SF027/2015 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI626999 A/Guangdong/15SF080/2015 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI627455 A/Fujian/3/2015 (A/H7N9) segment 2 (PB1) 4076.7 0.000000e+00 2251/2274 (98%) EPI628694 A/Guangdong/15SF055/2015 (A/H7N9) segment 2 (PB1) 4074.8 0.000000e+00 2251/2274 (98%) EPI656336 A/GD-27/2015/H7N9/2015-01-21 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2249/2271 (99%) EPI628622 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI627191 A/Guangdong/15SF020/2015 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI846037 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI656472 A/GD-92/2015/H7N9/2015-02-26 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2246/2268 (99%) EPI656432 A/GD-72/2015/H7N9/2015-02-07 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2248/2271 (98%) EPI656312 A/GD-20/2015/H7N9/2015-01-15 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2248/2271 (98%) EPI628638 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI656464 A/GD-76/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2245/2268 (98%) EPI628734 A/Anhui/33223/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI628726 A/Anhui/33228/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI628718 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI628686 A/Guangdong/15SF054/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2248/2274 (98%) EPI628662 A/Anhui/33227/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI628606 A/Environment/Anhui/39280/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI838018 A/chicken/Zhejiang/SIC30/2014 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI683148 A/chicken/Wenzhou/YHQL04/2014 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI838012 A/chicken/Zhejiang/SIC32/2014 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI627071 A/Guangdong/15SF050/2015 (A/H7N9) segment 2 (PB1) 4047.1 0.000000e+00 2246/2274 (98%) EPI683160 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI628702 A/Environment/Hunan/07626/2015 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI656488 A/GD-124/2015/H7N9/2015-02-26 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2241/2268 (98%) EPI656480 A/GD-91/2015/H7N9/2015-02-26 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2244/2271 (98%) EPI627199 A/Guangdong/15SF017/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI626983 A/Jiangsu/22184/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI583739 A/chicken/Yantai/2468/2013 (A/H9N2) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI656392 A/GD-50/2015/H7N9/2015-01-27 (A/H7N9) segment 2 (PB1) 4037.9 0.000000e+00 2242/2270 (98%) EPI656304 A/GD-17/2015/H7N9/2015-01-11 (A/H7N9) segment 2 (PB1) 4034.2 0.000000e+00 2242/2271 (98%) EPI628766 A/Zhejiang/8/2015 (A/H7N9) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI583783 A/chicken/Yantai/2469/2013 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI658093 A/environment/Jiangxi/05.07 NCJD0027D/2015(H5N6) (A/H5N6) segment 2 (PB1) 4030.5 0.000000e+00 2234/2260 (98%) EPI683158 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI628790 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI628782 A/Shandong-Taian/01/2015 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI628678 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI628670 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI594396 A/chicken/Yantai/2529/2013 (A/H0) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI585983 A/Shanghai/ION/2013 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI656424 A/GD-69/2015/H7N9/2015-02-04 (A/H7N9) segment 2 (PB1) 4025.0 0.000000e+00 2235/2268 (98%) EPI654496 A/Environment/GD-GZ_202/H9N2/2015-3 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2238/2268 (98%) EPI599780 A/chicken/Jiangxi/34682/2013 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI594380 A/chicken/Yantai/2303/2013 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI594373 A/chicken/Yantai/2243/2013 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI447822 A/Shanghai/06-A/2013 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI447793 A/Shanghai/12/2013 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI447769 A/Shanghai/17/2013 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI838004 A/chicken/Shandong/SIC21/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI683150 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI654478 A/Environment/GD-YF_87/H9N2/2015-2 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2237/2268 (98%) EPI576593 A/chicken/Guangdong/SD1/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI576592 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI576591 A/chicken/Guangdong/G2/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI568751 A/goose/Jiangsu/1027/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI545787 A/chicken/Suzhou/040201H/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI542310 A/Shanghai/MH01/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI509077 A/Beijing/02/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI508925 A/tree sparrow/Shanghai/01/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI504720 A/Shanghai/5190T/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI498096 A/Xuzhou/1/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI497916 A/Nanjing/7/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI497908 A/Suzhou/5/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI497871 A/Wuxi/4/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI469192 A/chicken/Rizhao/515/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI467303 A/Wuxi/1/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI460773 A/Nanjing/5/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457883 A/chicken/Guangdong/SD641/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457875 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457851 A/chicken/Jiangsu/SC537/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457779 A/chicken/Shanghai/S1410/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457747 A/chicken/Zhejiang/SD033/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457675 A/environment/Shanghai/S1436/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457659 A/environment/Shanghai/S1438/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457643 A/homing pigeon/Jiangsu/SD184/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457627 A/pigeon/Shanghai/S1423/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447960 A/Shanghai/3/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447950 A/Shanghai/4/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447876 A/Jiangsu/02/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447777 A/Shanghai/14/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447762 A/Shanghai/8/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447636 A/Anhui/03/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI440691 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI683154 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 2 (PB1) 4012.0 0.000000e+00 2241/2275 (98%) EPI681066 A/chicken/Zhejiang/727198/2014 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) EPI680703 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) EPI680699 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919611 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI833713 A/Fujian/3/2016 (A/H7N9) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI888008 A/Anhui/60928/2016 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2139/2152 (99%) EPI887984 A/Anhui/60927/2016 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI888072 A/Anhui/60926/2016 (A/H7N9) segment 3 (PA) 3899.4 0.000000e+00 2137/2150 (99%) EPI888056 A/Anhui/60935/2016 (A/H7N9) segment 3 (PA) 3899.4 0.000000e+00 2137/2150 (99%) EPI888048 A/Anhui/60934/2016 (A/H7N9) segment 3 (PA) 3899.4 0.000000e+00 2137/2150 (99%) EPI888040 A/Anhui/60933/2016 (A/H7N9) segment 3 (PA) 3899.4 0.000000e+00 2137/2150 (99%) EPI888016 A/Anhui/60929/2016 (A/H7N9) segment 3 (PA) 3899.4 0.000000e+00 2138/2151 (99%) EPI888000 A/Anhui/60925/2016 (A/H7N9) segment 3 (PA) 3899.4 0.000000e+00 2137/2150 (99%) EPI888032 A/Anhui/60931/2016 (A/H7N9) segment 3 (PA) 3893.9 0.000000e+00 2136/2150 (99%) EPI888024 A/Anhui/60932/2016 (A/H7N9) segment 3 (PA) 3892.0 0.000000e+00 2136/2151 (99%) EPI628812 A/Zhejiang/11/2015 (A/H7N9) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI683246 A/duck/Wenzhou/YJYF24/2015 (A/H7N9) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI681093 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI887864 A/Jiangsu/60465/2016 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI887880 A/Jiangsu/60462/2016 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI838060 A/chicken/Zhejiang/SIC30/2014 (A/H9N2) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI628828 A/Zhejiang/9/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI681088 A/chicken/Zhejiang/727198/2014 (A/H9N2) segment 3 (PA) 3858.8 0.000000e+00 2130/2151 (99%) EPI917064 A/Taiwan/1/2017 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI887888 A/Jiangsu/60461/2016 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI627173 A/Zhejiang/5/2015 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI838054 A/chicken/Zhejiang/SIC32/2014 (A/H9N2) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI628796 A/Fujian/28/2015 (A/H7N9) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI680771 A/chicken/Zhejiang/3C19/2013 (A/H9N2) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI627197 A/Guangdong/15SF017/2015 (A/H7N9) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI681254 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 3 (PA) 3834.8 0.000000e+00 2127/2152 (98%) EPI680749 A/chicken/Zhejiang/C71916/2013 (A/H9N2) segment 3 (PA) 3834.8 0.000000e+00 2126/2151 (98%) EPI680747 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 3 (PA) 3829.2 0.000000e+00 2125/2151 (98%) EPI628764 A/Zhejiang/8/2015 (A/H7N9) segment 3 (PA) 3823.7 0.000000e+00 2124/2151 (98%) EPI457849 A/chicken/Jiangsu/SC537/2013 (A/H7N9) segment 3 (PA) 3823.7 0.000000e+00 2124/2151 (98%) EPI467320 A/Wuxi/1/2013 (A/H7N9) segment 3 (PA) 3821.8 0.000000e+00 2123/2150 (98%) EPI447874 A/Jiangsu/02/2013 (A/H7N9) segment 3 (PA) 3821.8 0.000000e+00 2123/2150 (98%) EPI692637 A/chicken/Henan/F246/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI692635 A/chicken/Henan/117/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI692633 A/chicken/Henan/114/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI680758 A/chicken/Zhejiang/C38/2013 (A/H9N2) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI680733 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI663521 A/duck/Sunan/040802/2013 (A/H0) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI635547 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI635546 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI635545 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI628788 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI628676 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI628668 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI628604 A/Environment/Anhui/39280/2015 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI628564 A/Anhui/40095/2015 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI628180 A/Hunan/09193/2014 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI596649 A/Shanghai/02/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI576875 A/chicken/Jiangxi/12544/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI576873 A/chicken/Jiangxi/12492/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI576562 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI545207 A/duck/Sunan/040802G/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI542255 A/Shanghai/MH01/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI532269 A/chicken/Zhejiang/C483/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI532268 A/chicken/Zhejiang/C481/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI509114 A/Fujian/05/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI509065 A/Hunan/0070/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI497934 A/Nanjing/6/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI497890 A/Wuxi/4/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI497844 A/environment/Suzhou/8/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI490975 A/Environment/Guangdong/C13281030/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI468345 A/environment/Hangzhou/109-2/2013(H5N1) (A/H5N1) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI457873 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI457721 A/environment/Fujian/SC337/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI457713 A/environment/Henan/SC232/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI457689 A/environment/Shandong/SD039/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI457681 A/environment/Shandong/SD049/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI457633 A/pigeon/Shanghai/S1421/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI457617 A/wild pigeon/Jiangsu/SD001/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI448945 A/Shanghai/02/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI447959 A/Shanghai/3/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI447949 A/Shanghai/4/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI447888 A/chicken/Anhui-Chuzhou/01/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI447712 A/Fujian/01/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI447670 A/Jiangsu/07/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI447635 A/Anhui/03/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI443674 A/environment/Hangzhou/109-1/2013(H7N9) (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI443634 A/Hangzhou/169/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI443571 A/environment/Hangzhou/34-1/2013(H7N9) (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI440681 A/Chicken/Shanghai/S1053/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI439498 A/Shanghai/2/2013 (A/H7N9) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI473792 A/environment/Hangzhou/34-2/2013(H9N2) (A/H9N2) segment 3 (PA) 3814.5 0.000000e+00 2121/2149 (98%) EPI447656 A/Jiangsu/09/2013 (A/H7N9) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI692638 A/chicken/Henan/115/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI692636 A/chicken/Henan/99/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI692634 A/chicken/Henan/93/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI691860 A/chicken/Henan/107/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI683243 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI680772 A/chicken/Zhejiang/3C22/2013 (A/H9N2) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI663518 A/duck/Wuxi/0405006/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635681 A/Anhui/1-YK_RG136/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635678 A/Anhui/1-YK_RG140/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635677 A/Anhui/1-YK_RG139/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635676 A/Anhui/1-YK_RG138/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635675 A/Anhui/1-YK_RG137/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635673 A/Anhui/1-YK_RG135/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635672 A/Anhui/1-YK_RG126/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI635669 A/Anhui/1-YK_RG131/2013 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919608 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI919600 A/Guangdong/17SF003/2016 (A/H7N9) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI654467 A/GD-MZ_79/H9N2/2015-02-10 (A/H9N2) segment 5 (NP) 2710.2 0.000000e+00 1485/1494 (99%) EPI681129 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI628825 A/Zhejiang/9/2015 (A/H7N9) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI628793 A/Fujian/28/2015 (A/H7N9) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI627170 A/Zhejiang/5/2015 (A/H7N9) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI681125 A/chicken/Zhejiang/925018/2014 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680855 A/chicken/Zhejiang/C71916/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680854 A/chicken/Zhejiang/C71914/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680852 A/chicken/Zhejiang/C7195/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680839 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI628809 A/Zhejiang/11/2015 (A/H7N9) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI681127 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680862 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680858 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680857 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680853 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI509116 A/Fujian/05/2013 (A/H7N9) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI683071 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI680851 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI680850 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI680848 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638105 A/Anhui/1-YK_RG202/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638098 A/Anhui/1-YK_RG201/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638091 A/Anhui/1-YK_RG200/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638084 A/Anhui/1-YK_RG199/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638077 A/Anhui/1-YK_RG198/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638070 A/Anhui/1-YK_RG197/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638063 A/Anhui/1-YK_RG196/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638056 A/Anhui/1-YK_RG195/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638049 A/Anhui/1-YK_RG194/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638042 A/Anhui/1-YK_RG193/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638035 A/Anhui/1-YK_RG192/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638028 A/Anhui/1-YK_RG191/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638021 A/Anhui/1-YK_RG190/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638014 A/Anhui/1-YK_RG189/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638007 A/Anhui/1-YK_RG188/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638000 A/Anhui/1-YK_RG187/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637993 A/Anhui/1-YK_RG186/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637986 A/Anhui/1-YK_RG185/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637979 A/Anhui/1-YK_RG184/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637972 A/Anhui/1-YK_RG183/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637965 A/Anhui/1-YK_RG182/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637958 A/Anhui/1-YK_RG181/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637951 A/Anhui/1-YK_RG180/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637944 A/Anhui/1-YK_RG179/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637937 A/Anhui/1-YK_RG178/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637930 A/Anhui/1-YK_RG177/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637923 A/Anhui/1-YK_RG176/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637916 A/Anhui/1-YK_RG174/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637909 A/Anhui/1-YK_RG173/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637902 A/Anhui/1-YK_RG172/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637895 A/Anhui/1-YK_RG171/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637888 A/Anhui/1-YK_RG170/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637881 A/Anhui/1-YK_RG169/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637874 A/Anhui/1-YK_RG168/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637867 A/Anhui/1-YK_RG167/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637860 A/Anhui/1-YK_RG166/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637832 A/Anhui/1-YK_RG162/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637825 A/Anhui/1-YK_RG161/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637818 A/Anhui/1-YK_RG160/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637811 A/Anhui/1-YK_RG159/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637804 A/Anhui/1-YK_RG158/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637797 A/Anhui/1-YK_RG157/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637776 A/Anhui/1-YK_RG154/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637769 A/Anhui/1-YK_RG153/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637762 A/Anhui/1-YK_RG152/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637755 A/Anhui/1-YK_RG151/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637748 A/Anhui/1-YK_RG150/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637741 A/Anhui/1-YK_RG149/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637734 A/Anhui/1-YK_RG148/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637727 A/Anhui/1-YK_RG147/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637720 A/Anhui/1-YK_RG146/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637713 A/Anhui/1-YK_RG145/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637706 A/Anhui/1-YK_RG144/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637699 A/Anhui/1-YK_RG143/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637692 A/Anhui/1-YK_RG142/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637685 A/Anhui/1-YK_RG141/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637484 A/Anhui/1-YK_RG113/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637477 A/Anhui/1-YK_RG112/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637470 A/Anhui/1-YK_RG111/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637463 A/Anhui/1-YK_RG110/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637456 A/Anhui/1-YK_RG109/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637449 A/Anhui/1-YK_RG108/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637421 A/Anhui/1-YK_RG104/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637414 A/Anhui/1-YK_RG103/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637407 A/Anhui/1-YK_RG102/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637400 A/Anhui/1-YK_RG101/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637393 A/Anhui/1-YK_RG100/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637386 A/Anhui/1-YK_RG99/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637379 A/Anhui/1-YK_RG98/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637372 A/Anhui/1-YK_RG97/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637365 A/Anhui/1-YK_RG96/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637358 A/Anhui/1-YK_RG95/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637350 A/Anhui/1-YK_RG94/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637343 A/Anhui/1-YK_RG93/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637336 A/Anhui/1-YK_RG92/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637329 A/Anhui/1-YK_RG91/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637322 A/Anhui/1-YK_RG90/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919608 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI919600 A/Guangdong/17SF003/2016 (A/H7N9) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI654467 A/GD-MZ_79/H9N2/2015-02-10 (A/H9N2) segment 5 (NP) 2710.2 0.000000e+00 1485/1494 (99%) EPI681129 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI628825 A/Zhejiang/9/2015 (A/H7N9) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI628793 A/Fujian/28/2015 (A/H7N9) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI627170 A/Zhejiang/5/2015 (A/H7N9) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI681125 A/chicken/Zhejiang/925018/2014 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680855 A/chicken/Zhejiang/C71916/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680854 A/chicken/Zhejiang/C71914/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680852 A/chicken/Zhejiang/C7195/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI680839 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI628809 A/Zhejiang/11/2015 (A/H7N9) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI681127 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680862 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680858 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680857 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI680853 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI509116 A/Fujian/05/2013 (A/H7N9) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI683071 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI680851 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI680850 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI680848 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638105 A/Anhui/1-YK_RG202/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638098 A/Anhui/1-YK_RG201/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638091 A/Anhui/1-YK_RG200/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638084 A/Anhui/1-YK_RG199/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638077 A/Anhui/1-YK_RG198/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638070 A/Anhui/1-YK_RG197/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638063 A/Anhui/1-YK_RG196/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638056 A/Anhui/1-YK_RG195/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638049 A/Anhui/1-YK_RG194/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638042 A/Anhui/1-YK_RG193/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638035 A/Anhui/1-YK_RG192/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638028 A/Anhui/1-YK_RG191/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638021 A/Anhui/1-YK_RG190/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638014 A/Anhui/1-YK_RG189/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638007 A/Anhui/1-YK_RG188/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI638000 A/Anhui/1-YK_RG187/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637993 A/Anhui/1-YK_RG186/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637986 A/Anhui/1-YK_RG185/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637979 A/Anhui/1-YK_RG184/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637972 A/Anhui/1-YK_RG183/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637965 A/Anhui/1-YK_RG182/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637958 A/Anhui/1-YK_RG181/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637951 A/Anhui/1-YK_RG180/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637944 A/Anhui/1-YK_RG179/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637937 A/Anhui/1-YK_RG178/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637930 A/Anhui/1-YK_RG177/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637923 A/Anhui/1-YK_RG176/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637916 A/Anhui/1-YK_RG174/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637909 A/Anhui/1-YK_RG173/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637902 A/Anhui/1-YK_RG172/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637895 A/Anhui/1-YK_RG171/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637888 A/Anhui/1-YK_RG170/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637881 A/Anhui/1-YK_RG169/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637874 A/Anhui/1-YK_RG168/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637867 A/Anhui/1-YK_RG167/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637860 A/Anhui/1-YK_RG166/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637832 A/Anhui/1-YK_RG162/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637825 A/Anhui/1-YK_RG161/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637818 A/Anhui/1-YK_RG160/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637811 A/Anhui/1-YK_RG159/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637804 A/Anhui/1-YK_RG158/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637797 A/Anhui/1-YK_RG157/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637776 A/Anhui/1-YK_RG154/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637769 A/Anhui/1-YK_RG153/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637762 A/Anhui/1-YK_RG152/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637755 A/Anhui/1-YK_RG151/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637748 A/Anhui/1-YK_RG150/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637741 A/Anhui/1-YK_RG149/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637734 A/Anhui/1-YK_RG148/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637727 A/Anhui/1-YK_RG147/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637720 A/Anhui/1-YK_RG146/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637713 A/Anhui/1-YK_RG145/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637706 A/Anhui/1-YK_RG144/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637699 A/Anhui/1-YK_RG143/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637692 A/Anhui/1-YK_RG142/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637685 A/Anhui/1-YK_RG141/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637484 A/Anhui/1-YK_RG113/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637477 A/Anhui/1-YK_RG112/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637470 A/Anhui/1-YK_RG111/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637463 A/Anhui/1-YK_RG110/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637456 A/Anhui/1-YK_RG109/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637449 A/Anhui/1-YK_RG108/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637421 A/Anhui/1-YK_RG104/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637414 A/Anhui/1-YK_RG103/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637407 A/Anhui/1-YK_RG102/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637400 A/Anhui/1-YK_RG101/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637393 A/Anhui/1-YK_RG100/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637386 A/Anhui/1-YK_RG99/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637379 A/Anhui/1-YK_RG98/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637372 A/Anhui/1-YK_RG97/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637365 A/Anhui/1-YK_RG96/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637358 A/Anhui/1-YK_RG95/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637350 A/Anhui/1-YK_RG94/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637343 A/Anhui/1-YK_RG93/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637336 A/Anhui/1-YK_RG92/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637329 A/Anhui/1-YK_RG91/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI637322 A/Anhui/1-YK_RG90/2013 (A/H7N9) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919609 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI888054 A/Anhui/60935/2016 (A/H7N9) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI888046 A/Anhui/60934/2016 (A/H7N9) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI888038 A/Anhui/60933/2016 (A/H7N9) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI888014 A/Anhui/60929/2016 (A/H7N9) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI888006 A/Anhui/60928/2016 (A/H7N9) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI887982 A/Anhui/60927/2016 (A/H7N9) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI888030 A/Anhui/60931/2016 (A/H7N9) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI838201 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI833718 A/Fujian/3/2016 (A/H7N9) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI740732 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI681183 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI681178 A/chicken/Zhejiang/727198/2014 (A/H9N2) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI838243 A/Hunan/44557/2015 (A/H9N2) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI681175 A/chicken/Zhejiang/77082/2014 (A/H9N2) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI680520 A/Hunan/44558/2015 (A/H9N2) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI628826 A/Zhejiang/9/2015 (A/H7N9) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI628794 A/Fujian/28/2015 (A/H7N9) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI888070 A/Anhui/60926/2016 (A/H7N9) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI888022 A/Anhui/60932/2016 (A/H7N9) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI887998 A/Anhui/60925/2016 (A/H7N9) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI874332 A/Hong Kong/VB17002884/2017 (A/H7N9) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI681035 A/chicken/Zhejiang/3C7/2013 (A/H9N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI627171 A/Zhejiang/5/2015 (A/H7N9) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI764645 A/chicken/Shaoxing/5195/2013 (A/H0) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI764626 A/chicken/Shaoxing/5201/2013 (A/H7N9) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI683116 A/duck/Wenzhou/YJYF24/2015 (A/H7N9) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI681026 A/chicken/Zhejiang/C47/2013 (A/H9N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI681025 A/chicken/Zhejiang/C46/2013 (A/H9N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI681024 A/chicken/Zhejiang/C45/2013 (A/H9N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI681023 A/chicken/Zhejiang/C38/2013 (A/H9N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI681022 A/chicken/Zhejiang/C31/2013 (A/H9N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI681019 A/chicken/Zhejiang/C3/2013 (A/H9N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI654468 A/GD-MZ_79/H9N2/2015-02-10 (A/H9N2) segment 8 (NS) 1520.9 0.000000e+00 832/836 (99%) EPI596679 A/chicken/Wenzhou/2619/2013 (A/H0) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI583406 A/chicken/Shenzhen/967/2013 (A/H0) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI576627 A/environment/Shanghai/PD-JZ-01/2014 (A/H7N9) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI869667 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI764650 A/chicken/Shaoxing/5453/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI683105 A/chicken/Wenzhou/YHQL04/2014 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI681181 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI681179 A/chicken/Zhejiang/925018/2014 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI681040 A/chicken/Zhejiang/4C105/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI681028 A/chicken/Zhejiang/C52/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI680997 A/quail/Zhejiang/2A5/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI627123 A/Zhejiang/36/2014 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI594364 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI838173 A/chicken/Shandong/SIC21/2014 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 832/839 (99%) EPI764649 A/chicken/Jiaxing/4640/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI764642 A/chicken/Rizhao/3052/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI764619 A/chicken/Jiaxing/4490/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI764537 A/chicken/Huzhou/4034/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI691661 A/chicken/Henan/141/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI691660 A/chicken/Henan/117/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI691659 A/chicken/Henan/114/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI681036 A/chicken/Zhejiang/3C19/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI681021 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI681017 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI681003 A/pigeon/Zhejiang/2P5/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI681002 A/pigeon/Zhejiang/2P4/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI663522 A/pigeon/Wuxi/0405007/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI663499 A/duck/Sunan/040802/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI663498 A/duck/Wuxi/04030204/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636948 A/Anhui/1-YK_RG39/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636941 A/Anhui/1-YK_RG38/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636934 A/Anhui/1-YK_RG37/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636918 A/Anhui/1-YK_RG35/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636911 A/Anhui/1-YK_RG34/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636881 A/Anhui/1-YK_RG30/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636874 A/Anhui/1-YK_RG29/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636867 A/Anhui/1-YK_RG28/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636860 A/Anhui/1-YK_RG27/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636853 A/Anhui/1-YK_RG26/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636844 A/Anhui/1-YK_RG25/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636837 A/Anhui/1-YK_RG24/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636830 A/Anhui/1-YK_RG23/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636823 A/Anhui/1-YK_RG22/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636816 A/Anhui/1-YK_RG21/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636809 A/Anhui/1-YK_RG20/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636798 A/Anhui/1-YK_RG19/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636791 A/Anhui/1-YK_RG18/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636784 A/Anhui/1-YK_RG17/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636777 A/Anhui/1-YK_RG16/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636770 A/Anhui/1-YK_RG15/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636763 A/Anhui/1-YK_RG14/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636756 A/Anhui/1-YK_RG13/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636749 A/Anhui/1-YK_RG12/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636742 A/Anhui/1-YK_RG10/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636734 A/Anhui/1-YK_RG09/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636726 A/Anhui/1-YK_RG08/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636719 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636712 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636705 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636698 A/Anhui/1-YK_RG04/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636691 A/Anhui/1-YK_RG03/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636684 A/Anhui/1-YK_RG02/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI636677 A/Anhui/1-YK_RG01/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI627603 A/Environment/Guangdong-Guangzhou/XN01070/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI620203 A/Anhui/1-BALF_RG6/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI620196 A/Anhui/1-JCVI1_RG3/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) Link to comment Share on other sites More sharing options...
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