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Pandemic Potentials Blog

Sequences (COVID)

  1. First JN.1 Sequence from Bron France

    Started by niman,

    France/ARA-HCL023173585601/2023 Bron 11/5/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L

    • 1 reply
    • 84 views
    niman

  2. First JN.1 Sequence from Lyon France

    Started by niman,

    France/ARA-HCL023173182001/2023 Lyon 11/3/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L

    • 1 reply
    • 97 views
    niman

  3. First JN.1 Sequence from Drome France

    Started by niman,

    France/ARA-HCL023172273902/2023 Drome 10/30/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L

    • 1 reply
    • 98 views
    niman

  4. Third JN.1 Sequence from Pierre Benite France

    Started by niman,

    France/ARA-HCL023172136501/2023 Pierre Benite 11/2/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 111 views
    niman

  5. Second JN.1 Sequence from Chiba Japan

    Started by niman,

    Japan/PG-581555/2023 Chiba 10/26/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1 G17562T (NSP13)

    • 1 reply
    • 205 views
    niman

  6. Sixth JN.1 Sequence from Lombardy Italy

    Started by niman,

    Italy/LOM_Unimi-3855-23/2023 Lombardy 11/6/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L

    • 1 reply
    • 146 views
    niman

  7. Fifth JN.1 Sequence from San Antonio Texas USA

    Started by niman,

    USA/TX-UHS-UTHSA9642-P0/2023 San Antonio University Hospital 11/4/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP1 T170I

    • 1 reply
    • 99 views
    niman

  8. Fourth JN.1 Sequence from San Antonio Texas USA

    Started by niman,

    USA/TX-UHS-UTHSA9608-P0/2023 San Antonio University Hospital 10/30/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP1 T170I

    • 1 reply
    • 153 views
    niman

  9. Eighth JN.1 Sequence from Dublin Ireland

    Started by niman,

    Ireland/D-SVUH-FAX57411-017/2023 Dublin 11/12/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 160 views
    niman

  10. Seventh JN.1 Sequence from Dublin Ireland

    Started by niman,

    Ireland/D-SVUH-FAX57411-007/2023 Dublin 11/11/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 104 views
    niman

  11. Sixth JN.1 Sequence from Dublin Ireland

    Started by niman,

    Ireland/D-SVUH-FAX57411-001/2023 Dublin 11/14/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 118 views
    niman

  12. Sixth JN.1 Sequence from Castilla y Leon Spain

    Started by niman,

    Spain/CL-44913/2023 Castilla y Leon 10/31/23 collection NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L

    • 1 reply
    • 105 views
    niman

  13. Fifth JN.1 Sequence from Castilla y Leon Spain

    Started by niman,

    Spain/CL-44902/2023 Castilla y Leon 10/31/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L C9142T (NSP4)

    • 1 reply
    • 111 views
    niman

  14. Fourth JN.1 Sequence from Castilla y Leon Spain

    Started by niman,

    Spain/CL-44758/2023 Castilla y Leon 10/24/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 105 views
    niman

  15. Third JN.1 Sequence from Castilla y Leon Spain

    Started by niman,

    Spain/CL-44643/2023 Castilla y Leon 10/24/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 109 views
    niman

  16. Second JN.1 Sequence from Freiburg Germany

    Started by niman,

    Germany/BW-FR4800/2023 Freiburg 10/27/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 110 views
    niman

  17. First JN.1 Sequence from Freiburg Germany

    Started by niman,

    Germany/BW-FR4786/2023 Freiburg 10/23/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 100 views
    niman

  18. Fifty First JN.1 Sequence from England

    Started by niman,

    England/CLIMB-CM7Y811D/2023 England 11/7/23 collection Spike V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L C9142T (NSP4)

    • 1 reply
    • 97 views
    niman

  19. First JN1. Sequence from Qatar

    Started by niman,

    Qatar/NIC-25-VI-0108705/2023 Qatar 11/2/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L C9142T (NSP4)

    • 1 reply
    • 109 views
    niman

  20. Second JN.1 Sequence from Puerto Rico

    Started by niman,

    Puerto Rico/PR-CVL-020350/2023 Puerto Rico 10/30/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L C9142T (NSP4)

    • 1 reply
    • 91 views
    niman

  21. Second JN.1 Sequence from Esbjerg Denmark

    Started by niman,

    Denmark/DCGC-662985/2023 Esbjerg 10/30/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 112 views
    niman

  22. First JN.1 Sequence from Esbjerg Denmark

    Started by niman,

    Denmark/DCGC-662969/2023 Esbjerg 10/30/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 70 views
    niman

  23. First JN.1 Sequence from Osaka Japan

    Started by niman,

    Japan/PG-581841/2023 Osaka 10/24/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 133 views
    niman

  24. Eighth JN.1 Sequence from Karolinska University Hospital Solna Sweden

    Started by niman,

    Sweden/AB-01_SE100_23CS503067/2023 Solna Karolinska University Hospital 11/3/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 113 views
    niman

  25. Seventh JN.1 Sequence from Karolinska University Hospital Solna Sweden

    Started by niman,

    Sweden/AB-01_SE100_23CS503019/2023 Solna Karolinska University Hospital 11/4/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP1 T170I T18453C (NSP14)

    • 1 reply
    • 99 views
    niman

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