niman

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=-34.031259979688%2C18.63042084916994&z=11

South Africa/NICD-CRDM10926/2023 Western Cape 9/21/23 collection

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=-25.5864211797099%2C30.420333101953148&z=13

South Africa/NICD-R10575/2023 Mpumalanga 9/6/23 collection

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=-25.24827790331657%2C27.27850755502929&z=10

South Africa/NICD-R10638/2023 North West 9/18/23 collection

collection date 2023-09-29 geographic location United Kingdom host common name not provided host health state not provided host Homo sapiens host sex not provided host subject id not provided isolate not provided sample capture status active surveillance in response to outbreak sample name COG-UK/CLIMB-CM7YKRNU ENA-CHECKLIST ERC000033 INSDC center name Respiratory Virus Unit, Microbiology Services Colindale, Public Health England Submitter Id COG-UK/CLIMB-CM7YKRNU broker name COVID-19 Genomics UK Consortium collecting institution Respiratory Virus Unit, Microbiology Services Colindale, Public Health England collector name not provided definition for seropositive sample not provided geographic location (region and locality) England receipt date 2023-10-04 scientific_name Severe acute respiratory syndrome coronavirus 2 serotype (required for a seropositive sample) not provided virus identifier not provided BioProject PRJEB37886 COVID-19 Genomics UK (COG-UK) consortium Retrieve all samples from this project Submission EBI; 2023-10-12 Accession: SAMEA114489792 ID: 37784144 Nucleotide https://www.ncbi.nlm.nih.gov/biosample/SAMEA114489792

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=59.847835725732864%2C17.608857802874816&z=14

Sweden/C-03_SE600_000200633357N2/2023 Uppsala 10/12/23 collection Spike ins16MPLF, V483del NSP3 K1155R NSP2 Y441C JN.2

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=59.84552777601317%2C17.666614074035646&z=14

Sweden/C-03_SE600_000200632675N2/2023 Uppsala Spike ins16MPLF, V483del NSP3 K1155R NSP2 Y441C BN.2

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=59.8365153983207%2C17.645714296482492&z=14

Sweden/C-03_SE600_000200632671N2/2023 Uppsala 10/11/23 collection Spike ins16MPLF, V483del NSP3 K1155R NSP2 Y441C JN.2

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=34.15053066465266%2C-117.80262499362557&z=10

USA/CA-HLX-STM-SFYSWD8NM/2023 Southern California 10/3/23 collection Spike ins16MPLF, V483del NSP3 K1155R NSP2 F319L T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=55.93067104702628%2C-4.2491348838464305&z=14

Scotland/CLIMB-CM7YJ9TT/2023 10/5/23 collection https://ukcovid.xyz/ba_2_86_daily.php

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=55.90382375523053%2C-4.23773562097969&z=13

Scotland/CLIMB-CM7YJTDR/2023 Scotland 10/5/23 collection https://ukcovid.xyz/ba_2_86_daily.php

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=55.87254810174203%2C-4.260333900448001&z=14

Scotland/CLIMB-CM7YMJDG/2023 Scotland 10/4/23 collection https://ukcovid.xyz/ba_2_86_daily.php

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=55.869402627773376%2C-4.288180762874882&z=14

Scotland/CLIMB-CM7YKRNH/2023 Scotland 10/1/23 collection https://ukcovid.xyz/ba_2_86_daily.php

map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=55.86506819192961%2C-4.3328127208826945&z=14

Scotland/CLIMB-CM7Y8PWR/2023 Scotland 9/30/23 collection https://ukcovid.xyz/ba_2_86_daily.php