niman

https://covid19tracker.health.ny.gov/views/NYS-COVID19-Tracker/NYSDOHCOVID-19Tracker-Map?%3Aembed=yes&%3Atoolbar=no&%3Atabs=n

Germany/BY-ChVir21652/2020 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=48.363180470620506%2C9.836948498742078&z=7

Germany/BY-ChVir21648/2020 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=48.363180470620506%2C9.836948498742078&z=7

Charité Universitätsmedizin Berlin released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequence, (Germany/BY-ChVir21648/2020, Germany/BY-ChVir21652/2020), from Bavaria Germany collected Dec 22-23.

USA/FL-BPHL-2270/2020 12/29 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=26.297029183427092%2C-80.65311514248621&z=9

Florida Bureau of Public Health Laboratories has released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequence, USA/FL-BPHL-2270/2020. collected between Dec 29

Jan 11 501.v3/Brazil export to Japan K417T vs K417N in 501.v2 New CDC Seqs 25 CA, 21 FL, 4 MN, 1 GA, 1 PA https://recombinomics.co/thedrnimanshow/2021/011121_501v3_CDCseqs.mp3

USA/MN-CDC-STM-UNK58/2020 USA/MN-CDC-STM-153/2020 12/31 23F Minnesota https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.96330883379467%2C-93.43071822336209&z=8

USA/MN-CDC-STM-UNK57/2020 USA/MN-MDH-2252/2020 12/18 https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.96330883379467%2C-93.43071822336209&z=8

USA/MN-CDC-STM-UNK56/2020 USA/MN-MDH-2253/2020 12/26 https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.96330883379467%2C-93.43071822336209&z=8

USA/MN-CDC-STM-UNK55/2020 USA/MN-MDH-2254/2020 12/28 https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.96330883379467%2C-93.43071822336209&z=8

USA/MN-CDC-STM-UNK54/2020 USA/MN-MDH-2255/2020 12/26 https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.96330883379467%2C-93.43071822336209&z=8

Sequences from the four cases below have not been released. They will be assigned UNK numbers and updated when sequences are released USA/MN-CDC-STM-UNK54/2020 USA/MN-CDC-STM-UNK55/2020 USA/MN-CDC-STM-UNK56/2020 USA/MN-CDC-STM-UNK57/2020 USA/MN-CDC-STM-UNK58/2020. USA/MN-MDH-2255/2020 12/26 USA/MN-MDH-2254/2020 12/28 USA/MN-MDH-2253/2020 12/26 USA/MN-MDH-2252/2020 12/18 USA/MN-CDC-STM-153/2020 12/31 23F Minnesota The Minnesota Department of Health (MDH) today announced the new variant strain of the SARS-CoV-2 virus first detected in the United Kingdom was identified by genomic sequencing in positive specimens from five residents of four different counties in the Twin Cities metro area. Four of the cases were identified through the MDH Public Health Laboratory, and one was identified through the Centers for Disease Control and Prevention (CDC). The results were confirmed on Saturday, Jan. 9. The cases range in age from 15 to 37 years and their illness onsets range from Dec. 16 to Dec. 31. None have been hospitalized, to MDH’s knowledge. Two cases reported international travel, one did not travel, and the others have unknown travel history. https://www.health.state.mn.us/news/pressrel/2021/covid010921.html

Italy/APU-IZSPB_406PT/2020 12/24 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.989466248048124%2C16.97947699161205&z=11

Istituto Zooprofilattico Sperimentale della Puglia e della Basilicata has released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequences, (Italy/APU-IZSPB_406PT/2020), from Lecce, Italy collected Jan 24.

Italy/APU-IZSPB_409PT/2020 12/23 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.326424432599616%2C18.070062366015627&z=11

Italy/APU-IZSPB_408PT/2020 12/23 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.326424432599616%2C18.070062366015627&z=11

Italy/APU-IZSPB_405PT/2020 12/23 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.326424432599616%2C18.070062366015627&z=11

Istituto Zooprofilattico Sperimentale della Puglia e della Basilicata has released (at GISAID) 4 UK Variant B.1.1.7 SARS CoV2 sequences, (Italy/APU-IZSPB_405PT/2020, Italy/APU-IZSPB_408PT/2020, Italy/APU-IZSPB_409PT/2020), from Lecce, Italy collected Jan 22-23.

Greece/CP0800976/2020/2020 12/30 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=37.97931085334196%2C23.596064512890614&z=10

Greece/CP0794227/2020/2020 12/30 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=37.97931085334196%2C23.596064512890614&z=10

Greece/CP0794239/2020/2020 12/30 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=37.97931085334196%2C23.596064512890614&z=10

Greece/CP0800981/2020 12/30 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=37.97931085334196%2C23.596064512890614&z=10

BRFAA has released (at GISAID) four UK Variant B.1.1.7 SARS CoV2 sequences, (Greece/CP0800981/2020, Greece/CP0800976/2020, Greece/CP0794227/2020, Greece/CP0794239/2020), from Athens Greece collected Dec 30.

Belgium/rega-an376/2020 matched UK variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and K68 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=50.855317456624334%2C4.496689767783328&z=10