niman

LOCUS MF166576 1748 bp cRNA linear VRL 01-FEB-2018 DEFINITION Influenza A virus (A/turkey/Israel/184/2017(H5N8)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION MF166576 VERSION MF166576.1 KEYWORDS . SOURCE Influenza A virus (A/turkey/Israel/184/2017(H5N8)) ORGANISM Influenza A virus (A/turkey/Israel/184/2017(H5N8)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1748) AUTHORS Shkoda,I., Lapin,K., Simanov,L. and Lublin,A. TITLE Highly pathogenic avian influenza A virus H5N8 isolated in Israel JOURNAL Unpublished REFERENCE 2 (bases 1 to 1748) AUTHORS Shkoda,I., Lapin,K., Simanov,L. and Lublin,A. TITLE Direct Submission JOURNAL Submitted (28-MAY-2017) Division of Avian Diseases, Kimron Veterinari Institute, P.O.Box 12, Bet Dagan 50250, Israel COMMENT ##Assembly-Data-START## Assembly Method :: SeqMan v. DNASTAR Lasergene 8 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1748 /organism="Influenza A virus (A/turkey/Israel/184/2017(H5N8))" /mol_type="viral cRNA" /strain="A/turkey/Israel/184/2017" /serotype="H5N8" /host="tyrkey" /db_xref="taxon:2005440" /segment="4" /country="Israel" /collection_date="05-Feb-2017" /note="passage details: E1" gene 1..1704 /gene="HA" CDS 1..1704 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ASA45892.1" /translation="MEKIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPA NDLCYPGSLNDYEELKHLLSRINHFEKILIIPKSSWPNHETSLGVSAACPYQGTPSFF RNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYISVGT STLNQRLVPKIATRSQVNGQRGRMDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKG DSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLR NSPLREKRRKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYS EEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRIC I" sig_peptide 1..48 /gene="HA" mat_peptide 49..1035 /gene="HA" /product="HA1" mat_peptide 1036..1701 /gene="HA" /product="HA2" ORIGIN 1 atggagaaaa tagtgcttct tcttgcaata gttagccttg ttaaaagtga tcagatttgc 61 attggttacc atgcaaacaa ttcgacagag caagttgaca cgataatgga aaagaacgtc 121 actgttacac atgcccaaga catactggaa aaaacacaca acgggaagct ctgcgatcta 181 aatggggtga agcctctgat tttaaaggat tgtagtgtag ctggatggct cctcggaaac 241 ccaatgtgcg acgaattcat cagagtgccg gaatggtctt acatagtgga gagggctaat 301 ccagctaatg acctctgtta cccagggagc ctcaatgact atgaagaact gaaacacctg 361 ttgagcagaa taaatcattt tgagaagatt ctgatcatcc ccaagagttc ttggcccaat 421 catgaaacat cattaggggt gagcgcagct tgtccatacc agggaacgcc ctcctttttc 481 agaaatgtgg tatggcttat caaaaagaac gatgcatacc caacaataaa gataagctac 541 aataatacca atcgggaaga tctcttgata ctgtggggga ttcatcattc caacaatgca 601 gaagagcaga caaatctcta taaaaaccca accacctata tttcagttgg aacatcaaca 661 ttaaaccaga gattggtacc aaaaatagct actagatccc aagtaaacgg gcaacgtgga 721 agaatggact tcttctggac aattttaaaa ccgaatgatg caatccattt cgagagtaat 781 ggaaatttca ttgctccaga atatgcatac aaaattgtca agaaggggga ctcaacaatt 841 atgaaaagtg gagtggaata tggccactgc aacaccaaat gtcaaacccc agtaggagcg 901 ataaactcta gtatgccatt ccacaatata catcctctca ccatcgggga atgccccaaa 961 tacgtgaagt caaacaagtt ggtccttgcg actgggctca gaaatagtcc tctaagagaa 1021 aagagaagaa aaagagggct gtttggggct atagcaggtt ttatagaggg aggatggcag 1081 ggaatggttg atggttggta tgggtaccac catagcaatg agcaggggag tgggtacgct 1141 gcagacaaag aatccaccca aaaggcaata gatggagtta ccaataaggt caactcgatc 1201 attgacaaaa tgaacactca atttgaggca gttggaaggg agtttaataa cttagaaagg 1261 aggatagaga atttgaacaa gaaaatggaa gacggattcc tagatgtctg gacctataat 1321 gctgaacttc tagttctcat ggaaaacgag aggactctag atttccatga ctcaaatgtc 1381 aagaaccttt atgacaaagt cagactgcag cttagggata atgcaaagga gctgggtaac 1441 ggttgtttcg aattctatca caaatgtgat aatgaatgta tggaaagtgt gagaaatggg 1501 acgtatgact accctcagta ttcagaagaa gcaagattaa aaagagaaga aataagcgga 1561 gtgaaattag aatcaatagg aacttaccaa atactgtcaa tttattcaac agtggcgagt 1621 tccctagcac tggcaatcat ggtggctggt ctatctttat ggatgtgctc caatgggtcg 1681 ttacagtgca gaatttgcat ttaaatttgt gagctcagat tgtagttaaa aacacccttg 1741 tttctact

edit Name Isolate ID Subtype Passage PB2 PB1 PA HA NP NA MP NS HE P3 Collection date edit Name Isolate ID Subtype Passage PB2 PB1 PA HA NP NA MP NS HE P3 Collection date A/turkey/Israel/184/2017 EPI_ISL_298649 H5N8 passage details: E1 --- --- --- 1748 --- --- --- --- --- --- 2017-02-05 A/peregrine falcon/Israel/1086/2016 EPI_ISL_298653 H5N8 passage details: E1 --- --- --- 1748 --- --- --- --- --- --- 2016-12-25 A/great egret/Israel/1084/2016 EPI_ISL_298651 H5N8 passage details: E1 --- --- --- 1721 --- --- --- --- --- --- 2016-12-25 A/great egret/Israel/1088/2016 EPI_ISL_298648 H5N8 passage details: E1 --- --- --- 1748 --- --- --- --- --- --- 2016-12-25 A/turkey/Israel/1076/2016 EPI_ISL_298650 H5N8 passage details: E1 --- --- --- 1748 --- --- --- --- --- --- 2016-12-24 A/chicken/Israel/1048/2016 EPI_ISL_298642 H5N8 passage details: E1 --- --- --- 1748 --- --- --- --- --- --- 2016-12-20 A/turkey/Israel/1045/2016 EPI_ISL_298640 H5N8 passage details: E1 --- --- --- 1748 --- --- --- --- --- --- 2016-12-20 A/cormorant/Israel/1035/2016 EPI_ISL_298647 H5N8 passage details: E1 --- --- --- 1748 --- --- --- --- --- --- 2016-12-19 A/grey goose/Israel/986/2016 EPI_ISL_298652 H5N8 passage details: E1 --- --- --- 1629 --- --- --- --- --- --- 2016-12-12 A/chicken/Israel/881/2016 EPI_ISL_298641 H5N8 passage details: E1 --- --- --- 1717 --- --- --- --- --- --- 2016-12-07

Kimron Veterinary Institute in Israel has release 10 H5 wild bird and poultry sequences collected between December 2016 and February 2017 which are largely most closely to isolates from China and South Korea.

CHP notified of human case of avian influenza A (H7N4) in Mainland ****************************************************** The Centre for Health Protection (CHP) of the Department of Health (DH) today (February 14) received notification from the National Health and Family Planning Commission (NHFPC) that a human case of avian influenza A (H7N4) was confirmed from February 10 to 14, and reminded the public to maintain strict personal, food and environmental hygiene both locally and during travel. According to the NHFPC, this is the first case of human infection with avian influenza A (H7N4) in the world. The case involved a 68-year-old female patient living in Liyang in Changzhou of Jiangsu Province who developed symptoms on December 25, 2017. She was admitted to hospital for medical treatment on January 1 and was discharged on January 22. She had contact with live poultry before the onset of symptoms. All her close contacts did not have any symptoms during the medical surveillance period. According to a report from the Chinese Center for Disease Control and Prevention, upon analysis, the genes of the virus were determined to be of avian origin. "All novel influenza A infections, including H7N4, are notifiable infectious diseases in Hong Kong," the spokesman for the CHP said. "Based on the seasonal pattern, the activity of avian influenza viruses is expected to be higher in winter. Travellers to the Mainland or other affected areas must avoid visiting wet markets, live poultry markets or farms. They should be alert to the presence of backyard poultry when visiting relatives and friends. They should also avoid purchasing live or freshly slaughtered poultry, and avoid touching poultry/birds or their droppings. They should strictly observe personal and hand hygiene when visiting any place with live poultry," the spokesman reminded. Travellers returning from affected areas should consult a doctor promptly if symptoms develop, and inform the doctor of their travel history for prompt diagnosis and treatment of potential diseases. It is essential to tell the doctor if they have seen any live poultry during travel, which may imply possible exposure to contaminated environments. This will enable the doctor to assess the possibility of avian influenza and arrange necessary investigations and appropriate treatment in a timely manner. While local surveillance, prevention and control measures are in place, the CHP will remain vigilant and work closely with the World Health Organization and relevant health authorities to monitor the latest developments. The CHP's Port Health Office conducts health surveillance measures at all boundary control points. Thermal imaging systems are in place for body temperature checks on inbound travellers. Suspected cases will be immediately referred to public hospitals for follow-up. The display of posters and broadcasting of health messages in departure and arrival halls as health education for travellers is under way. The travel industry and other stakeholders are regularly updated on the latest information. The public should maintain strict personal, hand, food and environmental hygiene and take heed of the advice below if handling poultry: Avoid touching poultry, birds, animals or their droppings; When buying live chickens, do not touch them and their droppings. Do not blow at their bottoms. Wash eggs with detergent if soiled with faecal matter and cook and consume the eggs immediately. Always wash hands thoroughly with soap and water after handling chickens and eggs; Eggs should be cooked well until the white and yolk become firm. Do not eat raw eggs or dip cooked food into any sauce with raw eggs. Poultry should be cooked thoroughly. If there is pinkish juice running from the cooked poultry or the middle part of its bone is still red, the poultry should be cooked again until fully done; Wash hands frequently, especially before touching the mouth, nose or eyes, before handling food or eating, and after going to the toilet, touching public installations or equipment such as escalator handrails, elevator control panels or door knobs, or when hands are dirtied by respiratory secretions after coughing or sneezing; and Wear a mask if fever or respiratory symptoms develop, when going to a hospital or clinic, or while taking care of patients with fever or respiratory symptoms. The public may visit the CHP's pages for more information: the avian influenza page, the weekly Avian Influenza Report, global statistics and affected areas of avian influenza, the Facebook Page and the YouTube Channel. Ends/Wednesday, February 14, 2018 Issued at HKT 18:43 NNNN http://www.info.gov.hk/gia/general/201802/14/P2018021400759.htm

First human H7N4 case (68F) confirmed in Changzhou Jiangsu

http://www.renseradio.com/listenlive.htm

Tonight 11 PM EST Dr. Henry L. Niman, PhDFlu Report

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170211 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI1170204 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI1170195 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI1170184 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI1158112 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI890313 A/barnacle goose/Netherlands/1/2010 (A/H6N8) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI890533 A/turnstone/Netherlands/1/2010 (A/H3N8) segment 8 (NS) 1476.6 0.000000e+00 826/839 (98%) EPI889373 A/greater white-fronted goose/Netherlands/11/2009 (A/H6N1) segment 8 (NS) 1476.6 0.000000e+00 826/839 (98%) EPI889253 A/greater white-fronted goose/Netherlands/5/2010 (A/H5N3) segment 8 (NS) 1476.6 0.000000e+00 826/839 (98%) EPI514602 A/mallard/Sweden/50108/2006 (A/H4N6) segment 8 (NS) 1476.6 0.000000e+00 826/839 (98%) EPI372498 A/mallard/Ukraine/05842-NAMRU3/2006 (A/H3N8) segment 8 (NS) 1476.6 0.000000e+00 826/839 (98%) EPI1013985 A/mallard duck/Netherlands/38/2008 (A/H5N3) segment 8 (NS) 1471.1 0.000000e+00 825/839 (98%) EPI890430 A/barnacle goose/Netherlands/1/2011 (A/H6N8) segment 8 (NS) 1471.1 0.000000e+00 824/838 (98%) EPI513751 A/mallard/Sweden/79978/2008 (A/H4N6) segment 8 (NS) 1471.1 0.000000e+00 825/839 (98%) EPI1014774 A/mallard duck/Netherlands/34/2010 (A/H3N2) segment 8 (NS) 1465.5 0.000000e+00 824/839 (98%) EPI890796 A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 8 (NS) 1465.5 0.000000e+00 824/839 (98%) EPI890644 A/mallard duck/Netherlands/26/2011 (A/H11N9) segment 8 (NS) 1465.5 0.000000e+00 824/839 (98%) EPI514948 A/mallard/Sweden/52405/2006 (A/H0) segment 8 (NS) 1465.5 0.000000e+00 824/839 (98%) EPI367577 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 8 (NS) 1465.5 0.000000e+00 824/839 (98%) EPI1014569 A/mallard duck/Netherlands/16/2014 (A/H2N9) segment 8 (NS) 1460.0 0.000000e+00 823/839 (98%) EPI1011300 A/white-fronted goose/Netherlands/3/2010 (A/H5N2) segment 8 (NS) 1460.0 0.000000e+00 823/839 (98%) EPI1011021 A/mallard duck/Netherlands/14/2014 (A/H2N9) segment 8 (NS) 1460.0 0.000000e+00 823/839 (98%) EPI890402 A/greater white-fronted goose/Netherlands/2/2010 (A/H5N2) segment 8 (NS) 1460.0 0.000000e+00 823/839 (98%) EPI890365 A/Eurasian teal/Netherlands/1/2011 (A/H3N8) segment 8 (NS) 1460.0 0.000000e+00 823/839 (98%) EPI890209 A/mallard duck/Netherlands/24/2013 (A/H4N6) segment 8 (NS) 1460.0 0.000000e+00 822/838 (98%) EPI889779 A/mallard duck/Netherlands/15/2011 (A/H6N8) segment 8 (NS) 1460.0 0.000000e+00 823/839 (98%) EPI1014533 A/mallard duck/Netherlands/18/2014 (A/H1N1) segment 8 (NS) 1456.3 0.000000e+00 821/837 (98%) EPI1133534 A/black-necked crane/Zhaotong/ZT-12/2013 (A/H1N2) segment 8 (NS) 1454.4 0.000000e+00 822/839 (97%) EPI1013926 A/mallard duck/Netherlands/9/2014 (A/H6N2) segment 8 (NS) 1454.4 0.000000e+00 822/839 (97%) EPI1013491 A/white-fronted goose/Netherlands/5/2011 (A/H6N8) segment 8 (NS) 1454.4 0.000000e+00 822/839 (97%) EPI890612 A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 8 (NS) 1454.4 0.000000e+00 822/839 (97%) EPI475943 A/great black-backed gull/Iceland/1110/2011 (A/H5N2) segment 8 (NS) 1454.4 0.000000e+00 822/839 (97%) EPI890141 A/mallard duck/Netherlands/20/2011 (A/H6N8) segment 8 (NS) 1448.9 0.000000e+00 821/839 (97%) EPI845240 A/mallard/Sweden/141546/2013 (A/H3N6) segment 8 (NS) 1448.9 0.000000e+00 821/839 (97%) EPI309095 A/spur-winged goose/Nigeria/210/2008 (A/H5N2) segment 8 (NS) 1448.9 0.000000e+00 821/839 (97%) EPI284361 A/mallard/Czech Republic/15902-17K/2009 (A/H6N2) segment 8 (NS) 1448.9 0.000000e+00 821/839 (97%) EPI925974 A/pintail/Chany/198/2016 (A/H3N8) segment 8 (NS) 1443.4 0.000000e+00 820/839 (97%) EPI890903 A/mallard duck/Netherlands/3/2015 (A/H7N7) segment 8 (NS) 1443.4 0.000000e+00 820/839 (97%) EPI890133 A/mallard duck/Netherlands/2/2015 (A/H7N7) segment 8 (NS) 1443.4 0.000000e+00 820/839 (97%) EPI889772 A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 8 (NS) 1443.4 0.000000e+00 820/839 (97%) EPI525965 A/eurasian wigeon/Mongolia/340V/2009 (A/H4N6) segment 8 (NS) 1443.4 0.000000e+00 821/840 (97%) EPI387548 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 8 (NS) 1443.4 0.000000e+00 820/839 (97%) EPI306425 A/shoveler/Koymor/118/2009 (A/H3) segment 8 (NS) 1443.4 0.000000e+00 821/840 (97%) EPI925966 A/mallard/Chany/185/2016 (A/H3N8) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI925958 A/teal/Chany/135/2016 (A/H3N8) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI718530 A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI624440 A/chicken/Italy/473/1999 (A/H7N1) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI623942 A/chicken/England/26352/2015 (A/H7N7) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI618642 A/mallard/Sweden/366/2002 (A/H11N9) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI617999 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 8 (NS) 1437.8 0.000000e+00 820/840 (97%) EPI499903 A/turkey/Italy/472/1999 (A/H7N1) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI485622 A/mallard/Sweden/16/2002 (A/H12N9) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI464812 A/turkey/Italy/472/1999 (A/H7N1) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI309096 A/spur-winged goose/Nigeria/226/2008 (A/H5N2) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI309094 A/spur-winged goose/Nigeria/2/2008 (A/H5N2) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI238668 A/turkey/Italy/977/1999 (A/H7N1) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI89829 A/turkey/Italy/3620/1999 (A/H7N1) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI69224 A/turkey/Italy/1265/99 (A/H7N1) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI68189 A/turkey/Italy/977/99 (A/H7N1) segment 8 (NS) 1437.8 0.000000e+00 819/839 (97%) EPI505522 A/chicken/Italy/1081/1999 (A/H7N1) segment 8 (NS) 1434.1 0.000000e+00 818/839 (97%) EPI619108 A/mallard/Sweden/99377/2009 (A/H8N4) segment 8 (NS) 1432.3 0.000000e+00 819/840 (97%) EPI619006 A/mallard/Sweden/770/2002 (A/H10N6) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI618993 A/mallard/Sweden/768/2002 (A/H10N6) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI618977 A/mallard/Sweden/766/2002 (A/H0) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI618491 A/mallard/Sweden/101589/2009 (A/H11N9) segment 8 (NS) 1432.3 0.000000e+00 819/840 (97%) EPI505571 A/turkey/Italy/1555/1999 (A/H7N1) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI505542 A/turkey/Italy/1085/1999 (A/H7N1) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI505529 A/turkey/Italy/1083/1999 (A/H7N1) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI485680 A/mallard/Sweden/21/2002 (A/H5N2) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI485625 A/Eurasian wigeon/Netherlands/4/2000 (A/H6N2) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI485537 A/mallard/Sweden/43/2002 (A/H10N5) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI433416 A/mallard/Czech Republic/15962-4T/2010 (A/H6N9) segment 8 (NS) 1432.3 0.000000e+00 819/840 (97%) EPI433409 A/mallard/Czech Republic/15902-25K/2009 (A/H11N9) segment 8 (NS) 1432.3 0.000000e+00 819/840 (97%) EPI433390 A/mallard/Czech Republic/15902-18K/2009 (A/H6N9) segment 8 (NS) 1432.3 0.000000e+00 819/840 (97%) EPI367601 A/mallard/Czech Republic/15962-1T/2010 (A/H6N9) segment 8 (NS) 1432.3 0.000000e+00 819/840 (97%) EPI327348 A/turkey/Italy/1067/1999 (A/H7N1) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI314712 A/mallard/Czech Republic/15902-18K/2009 (A/H11N9) segment 8 (NS) 1432.3 0.000000e+00 819/840 (97%) EPI251709 A/mallard/Sweden/41/2002 (A/H10N6) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI238411 A/chicken/Italy/1067/1999 (A/H7N1) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI236182 A/mallard/Sweden/21/2002 (A/H5N2) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI89841 A/turkey/Italy/4169/99 (A/H7N1) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI63324 A/chicken/Italy/1082/1999 (A/H7N1) segment 8 (NS) 1432.3 0.000000e+00 818/839 (97%) EPI505579 A/turkey/Italy/2716/1999 (A/H7N1) segment 8 (NS) 1428.6 0.000000e+00 817/839 (97%) EPI619115 A/mallard/Sweden/101165/2009 (A/H8N4) segment 8 (NS) 1426.7 0.000000e+00 818/840 (97%) EPI514670 A/mallard/Sweden/7582/2003 (A/H4N6) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI438359 A/chicken/Italy/1279/1999 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI372514 A/garganey/Ukraine/05839-NAMRU3/2006 (A/H14N6) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI364119 A/duck/Fujian/3264/2007 (A/H6N6) segment 8 (NS) 1426.7 0.000000e+00 818/840 (97%) EPI327341 A/chicken/Italy/1391/1999 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI238621 A/turkey/Italy/2732/1999 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI238300 A/turkey/Italy/2379/2000 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI235568 A/Anas angustirostris/Astrakhan/3088/2002 (A/H4N8) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI69205 A/turkey/Italy/2732/1999 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI69186 A/turkey/Italy/2715/99 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI69148 A/turkey/Italy/3489/99 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI68512 A/turkey/Italy/3488/1999 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI68493 A/turkey/Italy/3185/99 (A/H7N1) segment 8 (NS) 1426.7 0.000000e+00 817/839 (97%) EPI505543 A/turkey/Italy/1086/1999 (A/H7N1) segment 8 (NS) 1423.0 0.000000e+00 816/839 (97%) EPI225341 A/pelican/Zambia/01/2006 (A/H3N6) segment 8 (NS) 1423.0 0.000000e+00 815/837 (97%) EPI1010900 A/mallard duck/Netherlands/46/2006 (A/H1N1) segment 8 (NS) 1421.2 0.000000e+00 816/839 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170210 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1170203 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1170194 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1158109 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1170183 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI909468 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI617869 A/mallard/Republic of Georgia/4/2012 (A/H1N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI889966 A/mallard duck/Netherlands/7/2014 (A/H6N2) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI704357 A/duck/Mongolia/200/2015 (A/H3N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI1013473 A/mallard duck/Netherlands/11/2014 (A/H6N2) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI493029 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI438282 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI965388 A/duck/Bangladesh/25767/2015 (A/H6N1) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI618038 A/domestic duck/Republic of Georgia/2/2010 (A/H10N7) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI618025 A/domestic duck/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI446508 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 5 (NP) 2551.3 0.000000e+00 1458/1497 (97%) EPI683033 A/wild bird/Wuhan/WHHN58/2014 (A/H1N1) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI683032 A/wild bird/Wuhan/WHHN16/2014 (A/H1N1) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI1011333 A/mallard duck/Georgia/3/2012 (A/H7N3) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI1006621 A/Anseriformes/Anhui/S107/2014 (A/H1N1) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI969336 A/wild bird/Korea/SK14/2014 (A/H1N1) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI961479 A/environment/Kamchatka/18/2016 (A/H5N5) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI601644 A/duck/Jiangxi/5581/2013 (A/H0) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI601635 A/duck/Jiangxi/5576/2013 (A/H0) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI470398 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI703486 A/duck/Anhui/FA258/2013 (A/H1N3) segment 5 (NP) 2542.1 0.000000e+00 1456/1496 (97%) EPI1153578 A/duck/Mongolia/17/2011 (A/H4N3) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI1055385 A/duck/Wuxi/JYJN203/2014 (A/H11N2) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI1055377 A/chicken/Wuxi/JYJN132/2014 (A/H11N2) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI1055369 A/duck/Wuxi/JYJN126/2014 (A/H11N2) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI942171 A/duck/Ganzhou/GZ5/2015 (A/H4N6) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI704373 A/duck/Mongolia/211/2015 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI704365 A/duck/Mongolia/208/2015 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI704316 A/duck/Mongolia/167/2015 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI693707 A/duck/Mongolia/83/2015 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI693699 A/duck/Mongolia/20/2015 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI687188 A/chicken/Scotland/532/2016 (A/H5N1) segment 5 (NP) 2538.4 0.000000e+00 1458/1499 (97%) EPI601705 A/duck/Jiangxi/285/2013 (A/H0) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI591918 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI461630 A/duck/Hunan/S1256/2012 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI985015 A/mallard/Netherlands/15/2015 (A/H7N7) segment 5 (NP) 2536.6 0.000000e+00 1439/1472 (97%) EPI1175904 A/duck/Mongolia/62/2013 (A/H3N1) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI1175832 A/duck/Mongolia/487/2011 (A/H3N8) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI1153533 A/duck/Mongolia/103/2011 (A/H3N8) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI1134045 A/duck/Mongolia/30/2011 (A/H3N8) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI1117262 A/M_Swan/NL-Groningen/16015826-001/2016 (A/H5N5) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI1001771 A/grey heron/Germany-SN/R572/2017 (A/H5N5) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI990771 A/greylag goose/Germany-NIAR11353-L02142/2016 (A/H5N5) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI954803 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI954616 A/gadwall/Italy/17VIR133-2/2017 (A/H5N5) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI889141 A/wild bird/Jiangxi/P419/2016 (A/H6N8) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI884242 A/shoveler/Chany/82K/2014 (A/H3N8) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI683042 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI617996 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI601836 A/duck/Jiangxi/17142/2013 (A/H0) segment 5 (NP) 2532.9 0.000000e+00 1456/1498 (97%) EPI591924 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI591912 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI703477 A/duck/Yunan/V286/2012 (A/H1N2) segment 5 (NP) 2531.0 0.000000e+00 1454/1496 (97%) EPI407865 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 5 (NP) 2529.2 0.000000e+00 1454/1497 (97%) EPI1159834 A/Duck/Dongting/D76-1/2016 (A/H5N7) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI1061138 A/duck/Zhejiang/D6/2013 (A/H1N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI1061137 A/duck/Zhejiang/D5/2013 (A/H1N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI963334 A/duck/Bangladesh/24035/2014 (A/H10N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI962067 A/Mute_swan/Hungary/5879/2017 (A/H5N5) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI926005 A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI925997 A/mallard/Chany/355/2016 (A/H1N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI925989 A/gadwall/Chany/315/2016 (A/H1N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI925981 A/mallard/Chany/313/2016 (A/H1N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI895347 A/Anser fabalis/China/Anhui/L256/2014 (A/H6N1) segment 5 (NP) 2527.3 0.000000e+00 1455/1498 (97%) EPI895299 A/Anser fabalis/China/Anhui/L9/2014 (A/H6N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI888671 A/swan/Germany-SN/R10645/2016 (A/H5N5) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI841764 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI704447 A/duck/Mongolia/996/2015 (A/H3N8) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI692489 A/duck/Hubei/S2213/2012 (A/H4N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI683035 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI617968 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI599810 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 5 (NP) 2527.3 0.000000e+00 1455/1498 (97%) EPI596424 A/duck/Vietnam/LBM439/2013 (A/H6N6) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI583947 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI916521 A/mute swan/Croatia/42/2017 (A/H5N5) segment 5 (NP) 2525.5 0.000000e+00 1453/1496 (97%) EPI965425 A/black-tailed godwit/Bangladesh/24734/2015 (A/H7N5) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI895307 A/Anser fabalis/China/Anhui/L63/2014 (A/H6N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI683037 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI683036 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI617758 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI600185 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI600179 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI600173 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI600167 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI600159 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI315101 A/mallard/PT/27972-B139/2007 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI986363 A/chicken/Croatia/104/2017 (A/H5N5) segment 5 (NP) 2520.0 0.000000e+00 1452/1496 (97%) EPI703476 A/duck/Fujian/JF47/2014 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1452/1496 (97%) EPI1098988 A/duck/Bangladesh/31227/2016 (A/H6N2) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI1006606 A/Anseriformes/Anhui/S3/2014 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI895275 A/Anser fabalis/China/Anhui/S65/2014 (A/H6N2) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI895251 A/Anser fabalis/China/Anhui/S20/2014 (A/H6N2) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI617770 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI602410 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI602350 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170207 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1170198 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1170190 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1170179 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1158107 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1010494 A/green-winged teal/Egypt/871/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI1010488 A/green-winged teal/Egypt/877/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI1006724 A/common teal/Korea/W550/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI1006723 A/common teal/Korea/W549/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI1006722 A/common teal/Korea/W548/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI858843 A/painted stork/India/10CA03/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI1006721 A/common teal/Korea/W547/2016 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI952638 A/chicken/Korea/H903/2017 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI1006725 A/common teal/Korea/W555/2017 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI926612 A/domestic duck/Siberia/103/2016 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI925952 A/gadwall/Chany/97/2016 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI952769 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI926604 A/domestic duck/Siberia/50K/2016 (A/H5N8) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI1159808 A/Anser cygnoides/Hubei/FW44/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1034973 A/grey heron/W779/2017 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI954563 A/turkey/Italy/17VIR538-1/2017 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3735.0 0.000000e+00 2108/2151 (98%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI1153560 A/duck/Mongolia/17/2011 (A/H4N3) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI1036186 A/duck/Moscow/4652/2011 (A/H4N6) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI962865 A/aquatic bird/Korea/CN2/2009 (A/H5N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI262643 A/aquatic bird/Korea/w79/2005 (A/H5N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI118321 A/duck/Jiang Xi/1850/2005 (A/H5N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI1133603 A/shelduck/Yasnopolyanske/4-08-02/2011 (A/H1N1) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI268977 A/mallard/Jiangxi/4408/2005 (A/H6N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI262644 A/aquatic bird/Korea/w81/2005 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI1011028 A/mallard duck/Georgia/3/2012 (A/H7N3) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI1010637 A/Bewick swan/Netherlands/1/2014 (A/H12N1) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI717886 A/environment/Hubei-Jinzhou/02/2010 (A/H6N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI118337 A/duck/Jiang Xi/3345/2005 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI1176421 A/duck/Mongolia/675/2010 (A/H1N1) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI1168866 A/mallard/Askania-Nova/39-15-02/2011 (A/H7N7) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI1133589 A/mallard/Nizhnegorsk/3-06-10/2010 (A/H7N7) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI387412 A/ruddy shelduck/Mongolia/1-26/2007 (A/H3N8) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI363534 A/duck/Guizhou/2773/2006 (A/H6N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI326817 A/environment/Korea/CSM05/2004 (A/H3N1) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI296253 A/wild duck/Korea/CW09/2005 (A/H1N1) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI268979 A/duck/Hunan/3748/2004 (A/H6N8) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI268960 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI1175851 A/duck/Mongolia/50/2010 (A/H10N8) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI1175823 A/duck/Mongolia/46/2010 (A/H10N8) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI1010821 A/mallard duck/Netherlands/2/2013 (A/H3N6) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI890596 A/greater white-fronted goose/Netherlands/1/2012 (A/H1N1) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI837836 A/environment/Korea/W267/2007 (A/H7N4) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI599172 A/migratory duck/Jiangxi/21248/2009 (A/H10N8) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI387502 A/canvasback/Mongolia/2-69/2007 (A/H10) segment 3 (PA) 3674.1 0.000000e+00 2095/2148 (97%) EPI345928 A/whistling swan/Shimane/580/2002 (A/H5N3) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI307313 A/aquatic bird/Korea/MA81/2007 (A/H5N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI307311 A/mallard duck/Korea/6L/2007 (A/H7N6) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI262663 A/aquatic bird/Korea/w222/2007 (A/H5N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI258967 A/aquatic bird/Korea/w164/2007 (A/H5N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI258966 A/aquatic bird/Korea/w163/2007 (A/H5N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI131894 A/sharp-tailed sandpiper/Australia/10/2004 (A/H11N9) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI69246 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI1175916 A/duck/Mongolia/637/2010 (A/H4N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI1133976 A/duck/Mongolia/244/2010 (A/H4N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI1014324 A/mallard duck/Netherlands/2/2014 (A/H10N7) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI891127 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI889396 A/mallard duck/Netherlands/1/2014 (A/H10N7) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI774513 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI749127 A/environment/Chongqing/02412/2012 (A/H5N1) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI687186 A/chicken/Scotland/532/2016 (A/H5N1) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI540395 A/duck/Bangladesh/1293/2008 (A/H6N1) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI335409 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI268962 A/duck/Guangxi/1455/2004 (A/H6N5) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI540323 A/duck/Bangladesh/1575/2009 (A/H3N8) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI540315 A/duck/Bangladesh/1576/2009 (A/H3N8) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI540307 A/duck/Bangladesh/1574/2009 (A/H3N8) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI363890 A/duck/Guangxi/1330/2007 (A/H6N8) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI363882 A/duck/Guangxi/890/2007 (A/H6N8) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI307308 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI268961 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI262667 A/aquatic bird/Korea/w234/2007 (A/H5N2) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI262666 A/aquatic bird/Korea/w231/2007 (A/H5N2) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170212 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI1170205 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI1170196 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI1170186 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI1158106 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI884245 A/shoveler/Chany/82K/2014 (A/H3N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI940659 A/duck/India/11CL01/2014 (A/H6N2) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1057754 A/duck/Kagoshima/KU57/2014 (A/H11N9) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI1057746 A/crane/Kagoshima/KU-T40/2015 (A/H11N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI837770 A/mallard/Poland/141/2015 (A/H5N1) segment 2 (PB1) 4023.1 0.000000e+00 2230/2257 (98%) EPI704370 A/duck/Mongolia/211/2015 (A/H3N8) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI704362 A/duck/Mongolia/208/2015 (A/H3N8) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI704313 A/duck/Mongolia/167/2015 (A/H3N8) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI693704 A/duck/Mongolia/83/2015 (A/H3N8) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI693696 A/duck/Mongolia/20/2015 (A/H3N8) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI990792 A/greylag goose/Germany-NI/AR1395-L02144/2017 (A/H5N8) segment 2 (PB1) 4017.6 0.000000e+00 2242/2275 (98%) EPI964915 A/chicken/Czech Republic/206-17_2/2017 (A/H5N8) segment 2 (PB1) 4012.0 0.000000e+00 2241/2275 (98%) EPI954537 A/Goose/Hungary/65817/2016 (A/H5N8) segment 2 (PB1) 4012.0 0.000000e+00 2241/2275 (98%) EPI887466 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 2 (PB1) 4012.0 0.000000e+00 2241/2275 (98%) EPI959417 A/domestic goose/Poland/33/2016 (A/H5N8) segment 2 (PB1) 4006.5 0.000000e+00 2240/2275 (98%) EPI922439 A/domestic duck/Germany-BB/R681ff/2017 (A/H5N8) segment 2 (PB1) 4006.5 0.000000e+00 2238/2272 (98%) EPI540405 A/waterfowl/Bangladesh/12301/2013 (A/H6N7) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI1133591 A/mallard/Nizhnegorsk/3-06-10/2010 (A/H7N7) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI1013376 A/white-fronted goose/Netherlands/3/2010 (A/H5N2) segment 2 (PB1) 4001.0 0.000000e+00 2239/2275 (98%) EPI990800 A/greylag goose/Germany-NI/AR703-L02138/2017 (A/H5N8) segment 2 (PB1) 4001.0 0.000000e+00 2239/2275 (98%) EPI974522 A/mute swan/Germany-TH/R1126/2017 (A/H5N8) segment 2 (PB1) 4001.0 0.000000e+00 2239/2275 (98%) EPI891301 A/greater white-fronted goose/Netherlands/2/2010 (A/H5N2) segment 2 (PB1) 4001.0 0.000000e+00 2239/2275 (98%) EPI874778 A/turkey/Germany-NI/R10523/2016 (A/H5N8) segment 2 (PB1) 4001.0 0.000000e+00 2239/2275 (98%) EPI464920 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 2 (PB1) 4001.0 0.000000e+00 2235/2269 (98%) EPI973788 A/grey heron/Germany-TH/R1125/2017 (A/H5N8) segment 2 (PB1) 3995.4 0.000000e+00 2238/2275 (98%) EPI959529 A/Mute swan/Hungary/6092/2017 (A/H5N8) segment 2 (PB1) 3995.4 0.000000e+00 2238/2275 (98%) EPI1169138 A/chicken/Rostov-on-Don/1321/2017 (A/H5N8) segment 2 (PB1) 3989.9 0.000000e+00 2237/2275 (98%) EPI965389 A/duck/Bangladesh/24692/2015 (A/H7N1) segment 2 (PB1) 3986.2 0.000000e+00 2235/2274 (98%) EPI837536 A/graylag goose/Poland/74/2010 (A/H5N2) segment 2 (PB1) 3986.2 0.000000e+00 2236/2275 (98%) EPI963326 A/duck/Bangladesh/24035/2014 (A/H10N1) segment 2 (PB1) 3984.3 0.000000e+00 2235/2274 (98%) EPI514974 A/mallard/Sweden/80261/2008 (A/H4N9) segment 2 (PB1) 3984.3 0.000000e+00 2235/2274 (98%) EPI560057 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 2 (PB1) 3980.7 0.000000e+00 2233/2272 (98%) EPI965525 A/duck/Bangladesh/26980/2015 (A/H7N9) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI965357 A/duck/Bangladesh/27042/2015 (A/H7N9) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI965337 A/duck/Bangladesh/26992/2015 (A/H7N9) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI965174 A/duck/Bangladesh/24706/2015 (A/H7N1) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI1168867 A/mallard/Askania-Nova/39-15-02/2011 (A/H7N7) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI1133597 A/mallard/Novomyhalivka/10-23-12/2010 (A/H7N7) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI617954 A/Mediterranean gull/Republic of Georgia/1/2011 (A/H9N3) segment 2 (PB1) 3956.6 0.000000e+00 2230/2274 (98%) EPI1133604 A/shelduck/Yasnopolyanske/4-08-02/2011 (A/H1N1) segment 2 (PB1) 3951.1 0.000000e+00 2229/2274 (98%) EPI1013392 A/tufted duck/Georgia/1/2012 (A/H2N3) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI891424 A/mallard duck/Netherlands/26/2010 (A/H4N6) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI618043 A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI617820 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI1013908 A/mallard duck/Georgia/3/2012 (A/H7N3) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI617793 A/yellow-legged gull/Republic of Georgia/1/2012 (A/H0) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI372361 A/shoveler/Egypt/14879-NAMRU3/2006 (A/H7N1) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI965363 A/duck/Bangladesh/25767/2015 (A/H6N1) segment 2 (PB1) 3923.4 0.000000e+00 2224/2274 (97%) EPI891371 A/mallard duck/Netherlands/6/2013 (A/H3N8) segment 2 (PB1) 3923.4 0.000000e+00 2224/2274 (97%) EPI618617 A/mallard/Sweden/133546/2011 (A/H10N4) segment 2 (PB1) 3923.4 0.000000e+00 2224/2274 (97%) EPI891426 A/mallard duck/Netherlands/26/2011 (A/H11N9) segment 2 (PB1) 3917.9 0.000000e+00 2224/2275 (97%) EPI617988 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 2 (PB1) 3916.0 0.000000e+00 2222/2273 (97%) EPI617899 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 2 (PB1) 3912.3 0.000000e+00 2222/2274 (97%) EPI965329 A/duck/Bangladesh/26920/2015 (A/H3N6) segment 2 (PB1) 3906.8 0.000000e+00 2221/2274 (97%) EPI464928 A/chicken/Italy/11VIR-7548/2011 (A/H5N2) segment 2 (PB1) 3906.8 0.000000e+00 2222/2275 (97%) EPI965346 A/duck/Bangladesh/25891/2015 (A/H4N6) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI617760 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI182047 A/common eider/Netherlands/1/2006 (A/H3N8) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI965342 A/duck/Bangladesh/26974/2015 (A/H3N6) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI965318 A/duck/Bangladesh/26948/2015 (A/H3N6) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI1010545 A/mallard duck/Sweden/139937/2012 (A/H15N5) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI891438 A/mallard duck/Netherlands/3/2015 (A/H7N7) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI891297 A/mallard duck/Netherlands/2/2015 (A/H7N7) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI1014581 A/mallard duck/Sweden/139647/2012 (A/H15N5) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI1014518 A/mallard duck/Sweden/139703/2012 (A/H15N5) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI1013669 A/mallard duck/Sweden/139752/2012 (A/H15N5) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI1013590 A/mallard duck/Sweden/139899/2012 (A/H15N5) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI1013575 A/mallard duck/Sweden/139579/2012 (A/H15N5) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI1013817 A/mallard duck/Netherlands/21/2014 (A/H4N6) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%) EPI623944 A/chicken/England/26352/2015 (A/H7N7) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%) EPI1011090 A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI1010959 A/mallard duck/Netherlands/24/2014 (A/H7N3) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI891412 A/mallard duck/Netherlands/30/2010 (A/H3N8) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI629347 A/chicken/NL-Barneveld/15004745-006-010/2015 (A/H7N7) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI629339 A/Chicken/NL-Barneveld/15004745-001-005/2015 (A/H7N7) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI874784 A/swan/Germany-SN/R10645/2016 (A/H5N5) segment 2 (PB1) 3864.3 0.000000e+00 2213/2274 (97%) EPI1117259 A/M_Swan/NL-Groningen/16015826-001/2016 (A/H5N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI1014240 A/mallard duck/Netherlands/8/2014 (A/H7N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI994065 A/grey heron/Germany-SN/R572/2017 (A/H5N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI990776 A/greylag goose/Germany-NIAR11353-L02142/2016 (A/H5N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI961474 A/environment/Kamchatka/18/2016 (A/H5N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI954801 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI954621 A/gadwall/Italy/17VIR133-2/2017 (A/H5N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI464944 A/chicken/Italy/12VIR-7785-67/2012 (A/H5N2) segment 2 (PB1) 3856.9 0.000000e+00 2213/2275 (97%) EPI464936 A/turkey/Italy/12VIR-6607-5/2012 (A/H5N2) segment 2 (PB1) 3856.9 0.000000e+00 2213/2275 (97%) EPI837762 A/mallard/Poland/10/2014 (A/H5N3) segment 2 (PB1) 3853.2 0.000000e+00 2199/2255 (97%) EPI962072 A/Mute_swan/Hungary/5879/2017 (A/H5N5) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI873617 A/mute swan/Croatia/102/2016 (A/H5N5) segment 2 (PB1) 3851.4 0.000000e+00 2209/2271 (97%) EPI839726 A/chicken/France/150169a/2015 (A/H5N1) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI464952 A/turkey/Italy/12VIR-8036-2/2012 (A/H5N2) segment 2 (PB1) 3851.4 0.000000e+00 2212/2275 (97%) EPI916519 A/mute swan/Croatia/42/2017 (A/H5N5) segment 2 (PB1) 3849.5 0.000000e+00 2210/2273 (97%) EPI942215 A/duck/Hubei/ZYSYG3/2015 (A/H6N2) segment 2 (PB1) 3845.8 0.000000e+00 2212/2276 (97%) EPI891408 A/mallard duck/Netherlands/67/2008 (A/H10N7) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI959441 A/mute swan/Poland/64/2017 (A/H5N5) segment 2 (PB1) 3842.2 0.000000e+00 2209/2274 (97%) EPI986360 A/chicken/Croatia/104/2017 (A/H5N5) segment 2 (PB1) 3840.3 0.000000e+00 2207/2271 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170213 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI1170206 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI1170197 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI1170187 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI1158105 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI617974 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI617882 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI1036183 A/duck/Moscow/4652/2011 (A/H4N6) segment 1 (PB2) 3991.7 0.000000e+00 2240/2280 (98%) EPI823778 A/environment/Kamchatka/24/2016 (A/H13N8) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI823762 A/environment/Kamchatka/23/2016 (A/H13N8) segment 1 (PB2) 3980.7 0.000000e+00 2238/2280 (98%) EPI341793 A/mallard/France/090360/2009 (A/H9N2) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI961485 A/environment/Kamchatka/117/2016 (A/H13N8) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI890883 A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI1014087 A/mallard duck/Georgia/11/2011 (A/H1N1) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI889820 A/mallard duck/Netherlands/15/2011 (A/H6N8) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI889410 A/Eurasian teal/Netherlands/1/2011 (A/H3N8) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI889594 A/mallard duck/Netherlands/20/2011 (A/H6N8) segment 1 (PB2) 3923.4 0.000000e+00 2228/2280 (97%) EPI1133605 A/shelduck/Yasnopolyanske/4-08-02/2011 (A/H1N1) segment 1 (PB2) 3912.3 0.000000e+00 2226/2280 (97%) EPI809271 A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 1 (PB2) 3912.3 0.000000e+00 2227/2281 (97%) EPI618045 A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 1 (PB2) 3912.3 0.000000e+00 2226/2280 (97%) EPI1010712 A/white-fronted goose/Netherlands/5/2011 (A/H6N8) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI890266 A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI1013538 A/mallard duck/Netherlands/18/2012 (A/H4N2) segment 1 (PB2) 3890.2 0.000000e+00 2223/2281 (97%) EPI1011210 A/mallard duck/Netherlands/16/2012 (A/H3N2) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI174667 A/chicken/Hubei/2856/2007 (A/H5N1) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI174665 A/duck/Hunan/1964/2007 (A/H5N1) segment 1 (PB2) 3890.2 0.000000e+00 2223/2281 (97%) EPI174670 A/chicken/Hunan/3157/2006 (A/H5N1) segment 1 (PB2) 3884.6 0.000000e+00 2221/2280 (97%) EPI174657 A/duck/Hunan/689/2006 (A/H5N1) segment 1 (PB2) 3884.6 0.000000e+00 2221/2280 (97%) EPI891105 A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI677988 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI560338 A/Italy/3/2013 (A/H7N7) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI221999 A/environment/Hunan/1-8/2007 (A/H5N1) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI174669 A/chicken/Hubei/3002/2007 (A/H5N1) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI174668 A/duck/Hubei/2911/2007 (A/H5N1) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI678028 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 1 (PB2) 3875.4 0.000000e+00 2219/2280 (97%) EPI678004 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 1 (PB2) 3875.4 0.000000e+00 2219/2280 (97%) EPI677996 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2) 3875.4 0.000000e+00 2219/2280 (97%) EPI889776 A/mallard duck/Netherlands/32/2011 (A/H5N2) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI816828 A/turkey/Poland/14/2013 (A/H9N2) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI809383 A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI678076 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI678060 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI678052 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI678036 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI222147 A/lesser kestrel/Heilongjiang/194/2007 (A/H5N1) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI678012 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 1 (PB2) 3871.7 0.000000e+00 2218/2280 (97%) EPI678092 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 1 (PB2) 3869.9 0.000000e+00 2218/2280 (97%) EPI678068 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 1 (PB2) 3869.9 0.000000e+00 2218/2280 (97%) EPI678084 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI678044 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI678020 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI1013811 A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI262682 A/aquatic bird/Korea/w120/2006 (A/H5N2) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI262680 A/aquatic bird/Korea/w113/2006 (A/H5N2) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI173585 A/swine/Korea/C12/2008 (A/H5N2) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI773762 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI174662 A/duck/Henan/1652/2006 (A/H5N1) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI174660 A/duck/Henan/1647/2006 (A/H5N1) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI262681 A/aquatic bird/Korea/w114/2006 (A/H5N2) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI816836 A/turkey/Poland/08/2014 (A/H9N2) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774511 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI262683 A/aquatic bird/Korea/w121/2006 (A/H5N2) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI816844 A/turkey/Poland/09/2014 (A/H9N2) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI1133958 A/duck/Mongolia/27/2011 (A/H3N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI167950 A/long-tailed shrike/Hong Kong/2762/2007 (A/H5N1) segment 1 (PB2) 3836.6 0.000000e+00 2197/2257 (97%) EPI718523 A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 1 (PB2) 3834.8 0.000000e+00 2213/2281 (97%) EPI222581 A/scaly-breasted munia/Hong Kong/45/2007 (A/H5N1) segment 1 (PB2) 3834.8 0.000000e+00 2202/2265 (97%) EPI1086370 A/Chicken/Egypt/374V/2016 (A/H9N2) segment 1 (PB2) 3823.7 0.000000e+00 2211/2281 (96%) EPI1013684 A/mallard duck/Netherlands/40/2011 (A/H7N1) segment 1 (PB2) 3823.7 0.000000e+00 2211/2281 (96%) EPI1013496 A/mallard duck/Netherlands/48/2011 (A/H7N1) segment 1 (PB2) 3823.7 0.000000e+00 2211/2281 (96%) EPI889596 A/mallard duck/Netherlands/8/2012 (A/H1N1) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI220527 A/environment/Hunan/6-69/2008 (A/H5N1) segment 1 (PB2) 3823.7 0.000000e+00 2211/2281 (96%) EPI1011215 A/mallard duck/Netherlands/45/2011 (A/H8N1) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI890747 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI890191 A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI889269 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI889248 A/mallard duck/Netherlands/43/2011 (A/H7N1) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI687184 A/chicken/Scotland/532/2016 (A/H5N1) segment 1 (PB2) 3807.1 0.000000e+00 2200/2270 (96%) EPI1087898 A/ Quail /Egypt/1253V/2016 (A/H9N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI839725 A/chicken/France/150169a/2015 (A/H5N1) segment 1 (PB2) 3796.0 0.000000e+00 2205/2280 (96%) EPI1168802 A/chicken/Egypt/ABD5/2015 (A/H9N2) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI1168801 A/chicken/Egypt/ABD4/2015 (A/H9N2) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI1168800 A/chicken/Egypt/ABD3/2015 (A/H9N2) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI839733 A/duck/France/150233/2015 (A/H5N2) segment 1 (PB2) 3784.9 0.000000e+00 2203/2280 (96%) EPI1168798 A/chicken/Egypt/ABD1/2015 (A/H9N2) segment 1 (PB2) 3779.4 0.000000e+00 2203/2281 (96%) EPI167855 A/crested goshawk/Hong Kong/458/2007 (A/H5N1) segment 1 (PB2) 3779.4 0.000000e+00 2166/2226 (97%) EPI1014358 A/mallard duck/Netherlands/18/2014 (A/H1N1) segment 1 (PB2) 3768.3 0.000000e+00 2201/2281 (96%) EPI1006524 A/duck/Guangxi/015D2/2009 (A/H3N2) segment 1 (PB2) 3762.7 0.000000e+00 2199/2280 (96%) EPI1168799 A/chicken/Egypt/ABD2/2015 (A/H9N2) segment 1 (PB2) 3757.2 0.000000e+00 2200/2282 (96%) EPI619190 A/mallard/Sweden/2990/2003 (A/H8N4) segment 1 (PB2) 3757.2 0.000000e+00 2198/2280 (96%) EPI619284 A/mallard/Sweden/2834/2003 (A/H8N4) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI401812 A/green-winged teal/Xianghai/430/2011 (A/H5N2) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI251798 A/mallard/Sweden/8/2003 (A/H8N4) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI484292 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2) 3748.0 0.000000e+00 2152/2214 (97%) EPI839741 A/duck/France/150236/2015 (A/H5N9) segment 1 (PB2) 3746.1 0.000000e+00 2197/2281 (96%) EPI316548 A/spot-billed duck/Korea/KNU SYG06/2006 (A/H5N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI514918 A/mallard/Sweden/274/2002 (A/H4N2) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI99874 A/duck/Denmark/65047/04 (A/H5N2) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI940605 A/guinea fowl/France/150207n/2015 (A/H5N9) segment 1 (PB2) 3735.0 0.000000e+00 2196/2282 (96%) EPI534805 A/duck/Zhejiang/D18/2013 (A/H3N3) segment 1 (PB2) 3735.0 0.000000e+00 2194/2280 (96%

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170214 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI1170200 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI1170192 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI1170181 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI1158111 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI1010490 A/green-winged teal/Egypt/871/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI1006710 A/common teal/Korea/W555/2017 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI1006709 A/common teal/Korea/W550/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI1006708 A/common teal/Korea/W549/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI1006707 A/common teal/Korea/W548/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI1006706 A/common teal/Korea/W547/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI952800 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI926616 A/domestic duck/Siberia/103/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI926608 A/domestic duck/Siberia/50K/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI925951 A/gadwall/Chany/97/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI1010493 A/green-winged teal/Egypt/877/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI954562 A/turkey/Italy/17VIR538-1/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI952642 A/chicken/Korea/H903/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI1034977 A/grey heron/W779/2017 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI1159812 A/Anser cygnoides/Hubei/FW44/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI962069 A/Mute_swan/Hungary/5879/2017 (A/H5N5) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI954804 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI954618 A/gadwall/Italy/17VIR133-2/2017 (A/H5N5) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI931201 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 7 (MP) 1762.8 0.000000e+00 972/981 (99%) EPI1117264 A/M_Swan/NL-Groningen/16015826-001/2016 (A/H5N5) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI961482 A/environment/Kamchatka/18/2016 (A/H5N5) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI899695 A/turkey/Germany-SH/R425/2017 (A/H5N5) segment 7 (MP) 1759.1 0.000000e+00 970/979 (99%) EPI990773 A/greylag goose/Germany-NIAR11353-L02142/2016 (A/H5N5) segment 7 (MP) 1757.3 0.000000e+00 971/981 (98%) EPI916522 A/mute swan/Croatia/42/2017 (A/H5N5) segment 7 (MP) 1757.3 0.000000e+00 969/978 (99%) EPI873622 A/mute swan/Croatia/102/2016 (A/H5N5) segment 7 (MP) 1757.3 0.000000e+00 969/978 (99%) EPI895487 A/barnacle goose/Germany-SH/R11505/2016 (A/H5N5) segment 7 (MP) 1755.4 0.000000e+00 969/979 (98%) EPI1002886 A/black swan/Germany-BW/R1364/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI954840 A/Mallard/Hungary/5821/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI986365 A/chicken/Croatia/104/2017 (A/H5N5) segment 7 (MP) 1751.7 0.000000e+00 968/978 (98%) EPI995483 A/cormorant/Germany-SH/R896/2017 (A/H5N5) segment 7 (MP) 1749.9 0.000000e+00 968/979 (98%) EPI1159828 A/Cygnus atratus/Hubei/HF-1/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI1032553 A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032527 A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032519 A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032511 A/Goose/Hungary/59763/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032503 A/Goose/Hungary/17985/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032495 A/Goose/Hungary/17580/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032487 A/Goose/Hungary/17051/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032479 A/Goose/Hungary/15729/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1019529 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI962050 A/Duck/Hungary/55764/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI962039 A/Duck/Hungary/54738/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI961503 A/turkey/Italy/17VIR1574-1/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI961452 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI959534 A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI959427 A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI956123 A/Goose/Hungary/59712/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954832 A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954730 A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954722 A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954714 A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954682 A/Mute swan/Hungary/1955/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954650 A/Duck/Hungary/984/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954634 A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI954594 A/turkey/Italy/17VIR1338-3/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI953518 A/mallard/Hungary/57857/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI909463 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI909455 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI866980 A/duck/Hungary/60441/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI860521 A/goose/Hungary/55128/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI860516 A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI859202 A/mute_swan/Hungary/51049/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1085345 A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 969/981 (98%) EPI969267 A/chicken/Czech Republic/2644-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 969/981 (98%) EPI931199 A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 969/981 (98%) EPI931112 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 969/981 (98%) EPI930844 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 969/981 (98%) EPI930839 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 969/981 (98%) EPI1126346 A/mallard/Czech Republic/136-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 968/981 (98%) EPI1117256 A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1087641 A/chicken/Czech Republic/988-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 968/981 (98%) EPI1032471 A/Goose/Hungary/17261/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019841 A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019833 A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019801 A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019793 A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019785 A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019777 A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019745 A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019729 A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019721 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019705 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019673 A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019657 A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI1019641 A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170209 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 6 (NA) 2501.5 0.000000e+00 1354/1354 (100%) EPI1170201 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 6 (NA) 2501.5 0.000000e+00 1354/1354 (100%) EPI1170193 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 6 (NA) 2501.5 0.000000e+00 1354/1354 (100%) EPI1170182 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 6 (NA) 2501.5 0.000000e+00 1354/1354 (100%) EPI1158110 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 6 (NA) 2501.5 0.000000e+00 1354/1354 (100%) EPI890019 A/greater white-fronted goose/Netherlands/3/2011 (A/H6N2) segment 6 (NA) 2100.8 0.000000e+00 1169/1185 (98%) EPI889275 A/gadwall duck/Netherlands/1/2011 (A/H6N2) segment 6 (NA) 2089.7 0.000000e+00 1167/1185 (98%) EPI617878 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 6 (NA) 2087.8 0.000000e+00 1166/1184 (98%) EPI895332 A/Anser fabalis/China/Anhui/L180/2014 (A/H6N2) segment 6 (NA) 2062.0 0.000000e+00 1162/1185 (98%) EPI895260 A/Anser fabalis/China/Anhui/S39/2014 (A/H6N2) segment 6 (NA) 2062.0 0.000000e+00 1162/1185 (98%) EPI334401 A/Teal/Norway/10_1037/2010 (A/H3N2) segment 6 (NA) 2062.0 0.000000e+00 1148/1164 (98%) EPI691796 A/duck/Sichuan/183/2013 (A/H9N2) segment 6 (NA) 2060.1 0.000000e+00 1151/1169 (98%) EPI222089 A/garganey/Altai/1213/2007 (A/H5N2) segment 6 (NA) 2060.1 0.000000e+00 1151/1169 (98%) EPI222049 A/gadwall/Altai/1202/2007 (A/H5N2) segment 6 (NA) 2060.1 0.000000e+00 1151/1169 (98%) EPI1010901 A/mallard duck/Netherlands/9/2014 (A/H6N2) segment 6 (NA) 2056.4 0.000000e+00 1161/1185 (97%) EPI895276 A/Anser fabalis/China/Anhui/S65/2014 (A/H6N2) segment 6 (NA) 2056.4 0.000000e+00 1161/1185 (97%) EPI704309 A/duck/Mongolia/154/2015 (A/H0N2) segment 6 (NA) 2056.4 0.000000e+00 1161/1185 (97%) EPI704301 A/duck/Mongolia/141/2015 (A/H0N2) segment 6 (NA) 2056.4 0.000000e+00 1161/1185 (97%) EPI693716 A/duck/Mongolia/66/2015 (A/H10N2) segment 6 (NA) 2056.4 0.000000e+00 1161/1185 (97%) EPI182381 A/mallard/Xuyi/10/2005 (A/H5N2) segment 6 (NA) 2056.4 0.000000e+00 1161/1185 (97%) EPI377586 A/mallard/Sweden/58451/2006 (A/H2N2) segment 6 (NA) 2054.6 0.000000e+00 1161/1185 (97%) EPI377578 A/mallard/Sweden/58112/2006 (A/H2N2) segment 6 (NA) 2049.1 0.000000e+00 1160/1185 (97%) EPI1006614 A/Anseriformes/Anhui/S61/2014 (A/H1N2) segment 6 (NA) 2047.2 0.000000e+00 1154/1177 (98%) EPI891121 A/mallard duck/Netherlands/7/2014 (A/H6N2) segment 6 (NA) 2045.4 0.000000e+00 1159/1185 (97%) EPI718560 A/Anas platyrhynchos/Belgium/24311pcs5/2012 (A/H9N2) segment 6 (NA) 2045.4 0.000000e+00 1159/1185 (97%) EPI182378 A/spotbill duck/Xuyi/18/2005 (A/H5N2) segment 6 (NA) 2045.4 0.000000e+00 1159/1185 (97%) EPI940663 A/duck/India/11CL01/2014 (A/H6N2) segment 6 (NA) 2043.5 0.000000e+00 1150/1172 (98%) EPI1013937 A/mallard duck/Netherlands/11/2014 (A/H6N2) segment 6 (NA) 2039.8 0.000000e+00 1158/1185 (97%) EPI942124 A/duck/Hubei/ZYSYG15/2015 (A/H6N2) segment 6 (NA) 2039.8 0.000000e+00 1158/1185 (97%) EPI942123 A/duck/Hubei/ZYSYG14/2015 (A/H6N2) segment 6 (NA) 2039.8 0.000000e+00 1158/1185 (97%) EPI942122 A/duck/Hubei/ZYSYG1/2015 (A/H6N2) segment 6 (NA) 2039.8 0.000000e+00 1158/1185 (97%) EPI118050 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 6 (NA) 2039.8 0.000000e+00 1144/1164 (98%) EPI906566 A/Environment/Jiangxi/08488/2015 (A/H12N2) segment 6 (NA) 2038.0 0.000000e+00 1147/1169 (98%) EPI895252 A/Anser fabalis/China/Anhui/S20/2014 (A/H6N2) segment 6 (NA) 2038.0 0.000000e+00 1147/1169 (98%) EPI334396 A/Mallard/Norway/10_1368/2010 (A/H6N2) segment 6 (NA) 2038.0 0.000000e+00 1132/1147 (98%) EPI181963 A/mallard/Netherlands/2/2005 (A/H4N2) segment 6 (NA) 2036.1 0.000000e+00 1154/1180 (97%) EPI890441 A/greater white-fronted goose/Netherlands/6/2010 (A/H6N2) segment 6 (NA) 2034.3 0.000000e+00 1155/1182 (97%) EPI118064 A/duck/Jiang Xi/3345/2005 (A/H5N2) segment 6 (NA) 2034.3 0.000000e+00 1143/1164 (98%) EPI618503 A/mallard/Sweden/4932/2004 (A/H9N2) segment 6 (NA) 2032.4 0.000000e+00 1157/1185 (97%) EPI363577 A/duck/Yunnan/3136/2006 (A/H6N2) segment 6 (NA) 2032.4 0.000000e+00 1146/1169 (98%) EPI619172 A/mallard/Sweden/60041/2007 (A/H8N2) segment 6 (NA) 2030.6 0.000000e+00 1153/1180 (97%) EPI619098 A/mallard/Sweden/68537/2007 (A/H0) segment 6 (NA) 2030.6 0.000000e+00 1153/1180 (97%) EPI890042 A/greater white-fronted goose/Netherlands/5/2008 (A/H5N2) segment 6 (NA) 2026.9 0.000000e+00 1156/1185 (97%) EPI618077 A/mallard/Sweden/60065/2007 (A/H0) segment 6 (NA) 2026.9 0.000000e+00 1157/1186 (97%) EPI514009 A/mallard/Sweden/68551/2007 (A/H4N2) segment 6 (NA) 2026.9 0.000000e+00 1157/1186 (97%) EPI514000 A/mallard/Sweden/68940/2007 (A/H4N2) segment 6 (NA) 2026.9 0.000000e+00 1157/1186 (97%) EPI513964 A/mallard/Sweden/68677/2007 (A/H0) segment 6 (NA) 2026.9 0.000000e+00 1157/1186 (97%) EPI513926 A/mallard/Sweden/69580/2007 (A/H0) segment 6 (NA) 2026.9 0.000000e+00 1157/1186 (97%) EPI377602 A/mallard/Sweden/68597/2007 (A/H2N2) segment 6 (NA) 2026.9 0.000000e+00 1157/1186 (97%) EPI377594 A/mallard/Sweden/68735/2007 (A/H2N2) segment 6 (NA) 2026.9 0.000000e+00 1157/1186 (97%) EPI182379 A/spotbill duck/Xuyi/6/2005 (A/H11N2) segment 6 (NA) 2026.9 0.000000e+00 1145/1169 (97%) EPI417484 A/duck/Guangxi/GXd-2/2010 (A/H6N2) segment 6 (NA) 2025.0 0.000000e+00 1154/1183 (97%) EPI890135 A/greater white-fronted goose/Netherlands/1/2006 (A/H6N2) segment 6 (NA) 2023.2 0.000000e+00 1155/1185 (97%) EPI576632 A/Taiwan/DV413/2006 (A/H5N2) segment 6 (NA) 2023.2 0.000000e+00 1155/1185 (97%) EPI514047 A/mallard/Sweden/68504/2007 (A/H4N2) segment 6 (NA) 2023.2 0.000000e+00 1155/1185 (97%) EPI181648 A/duck/Tsukuba/9/2005 (A/H5N2) segment 6 (NA) 2023.2 0.000000e+00 1143/1167 (97%) EPI890264 A/greater white-fronted goose/Netherlands/6/2008 (A/H5N2) segment 6 (NA) 2021.4 0.000000e+00 1155/1185 (97%) EPI839738 A/duck/France/150233/2015 (A/H5N2) segment 6 (NA) 2021.4 0.000000e+00 1144/1169 (97%) EPI600780 A/migratory duck/Jiangxi/10857/2005 (A/H10N2) segment 6 (NA) 2021.4 0.000000e+00 1144/1169 (97%) EPI586236 A/muskrat/Russia/63/2014 (A/H2N2) segment 6 (NA) 2021.4 0.000000e+00 1155/1185 (97%) EPI1006905 A/chicken/Korea/C54/2009 (A/H9N2) segment 6 (NA) 2019.5 0.000000e+00 1153/1183 (97%) EPI1006512 A/chicken/Guangxi/015C10/2009 (A/H3N2) segment 6 (NA) 2019.5 0.000000e+00 1153/1183 (97%) EPI576639 A/Taiwan/DV518/2006 (A/H5N2) segment 6 (NA) 2017.7 0.000000e+00 1154/1185 (97%) EPI574273 A/mule duck/Bulgaria/175/2009 (A/H0) segment 6 (NA) 2017.7 0.000000e+00 1144/1170 (97%) EPI574265 A/mule duck/Bulgaria/174/2009 (A/H6N2) segment 6 (NA) 2017.7 0.000000e+00 1144/1170 (97%) EPI225321 A/northern pintail/Akita/714/2006 (A/H5N2) segment 6 (NA) 2017.7 0.000000e+00 1154/1185 (97%) EPI618548 A/mallard/Sweden/58705/2006 (A/H5N2) segment 6 (NA) 2015.8 0.000000e+00 1154/1185 (97%) EPI600911 A/migratory duck/Jiangxi/10861/2005 (A/H10N2) segment 6 (NA) 2015.8 0.000000e+00 1143/1169 (97%) EPI514178 A/mallard/Sweden/58463/2006 (A/H0) segment 6 (NA) 2015.8 0.000000e+00 1154/1185 (97%) EPI268167 A/duck/Guangxi/141/2005 (A/H6N2) segment 6 (NA) 2015.8 0.000000e+00 1143/1169 (97%) EPI1098967 A/duck/Bangladesh/31019/2016 (A/H3N2) segment 6 (NA) 2012.1 0.000000e+00 1153/1185 (97%) EPI574226 A/mule duck/Bulgaria/173/2009 (A/H6N2) segment 6 (NA) 2012.1 0.000000e+00 1143/1170 (97%) EPI463328 A/mallard/Sweden/99853/2009 (A/H11N2) segment 6 (NA) 2012.1 0.000000e+00 1154/1186 (97%) EPI438283 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 6 (NA) 2012.1 0.000000e+00 1153/1185 (97%) EPI284652 A/duck/Hunan/8-19/2009 (A/H4N2) segment 6 (NA) 2012.1 0.000000e+00 1153/1185 (97%) EPI889991 A/mallard duck/Netherlands/3/2008 (A/H6N2) segment 6 (NA) 2010.3 0.000000e+00 1153/1185 (97%) EPI514228 A/mallard/Sweden/52593/2006 (A/H0) segment 6 (NA) 2010.3 0.000000e+00 1153/1185 (97%) EPI514154 A/mallard/Sweden/58359/2006 (A/H0) segment 6 (NA) 2010.3 0.000000e+00 1153/1185 (97%) EPI377625 A/mallard/Netherlands/14/2007 (A/H2N2) segment 6 (NA) 2010.3 0.000000e+00 1153/1185 (97%) EPI363521 A/duck/Guizhou/1084/2006 (A/H6N2) segment 6 (NA) 2010.3 0.000000e+00 1142/1169 (97%) EPI268188 A/mallard/Jiangxi/8264/2004 (A/H6N2) segment 6 (NA) 2010.3 0.000000e+00 1142/1169 (97%) EPI262551 A/aquatic bird/Korea/w96/2005 (A/H5N2) segment 6 (NA) 2010.3 0.000000e+00 1143/1170 (97%) EPI181947 A/mallard/Netherlands/14/2007 (A/H2N2) segment 6 (NA) 2010.3 0.000000e+00 1153/1185 (97%) EPI1006881 A/chicken/Korea/C41/2009 (A/H9N2) segment 6 (NA) 2008.4 0.000000e+00 1150/1183 (97%) EPI816849 A/turkey/Poland/09/2014 (A/H9N2) segment 6 (NA) 2008.4 0.000000e+00 1266/1355 (93%) EPI585518 A/turkey/England/13538/2013 (A/H9N2) segment 6 (NA) 2008.4 0.000000e+00 1267/1355 (93%) EPI585515 A/turkey/England/13437/2013 (A/H9N2) segment 6 (NA) 2008.4 0.000000e+00 1267/1355 (93%) EPI463340 A/mallard/Sweden/99889/2009 (A/H11N2) segment 6 (NA) 2008.4 0.000000e+00 1150/1181 (97%) EPI463327 A/mallard/Sweden/99852/2009 (A/H11N2) segment 6 (NA) 2008.4 0.000000e+00 1150/1181 (97%) EPI463323 A/mallard/Sweden/99846/2009 (A/H11N2) segment 6 (NA) 2008.4 0.000000e+00 1150/1181 (97%) EPI463312 A/mallard/Sweden/99820/2009 (A/H11N2) segment 6 (NA) 2008.4 0.000000e+00 1150/1181 (97%) EPI457889 A/chicken/Guangxi/GXc-1/2011 (A/H1N2) segment 6 (NA) 2008.4 0.000000e+00 1151/1183 (97%) EPI397607 A/wild goose/Germany-BB/R2329/2008 (A/H6N2) segment 6 (NA) 2008.4 0.000000e+00 1149/1180 (97%) EPI1006897 A/chicken/Korea/C51/2009 (A/H9N2) segment 6 (NA) 2006.6 0.000000e+00 1150/1182 (97%) EPI463349 A/mallard/Sweden/99985/2009 (A/H6N2) segment 6 (NA) 2006.6 0.000000e+00 1153/1186 (97%) EPI463348 A/mallard/Sweden/99983/2009 (A/H6N2) segment 6 (NA) 2006.6 0.000000e+00 1153/1186 (97%) EPI463347 A/mallard/Sweden/99966/2009 (A/H6N2) segment 6 (NA) 2006.6 0.000000e+00 1153/1186 (97%) EPI463346 A/mallard/Sweden/99961/2009 (A/H6N2) segment 6 (NA) 2006.6 0.000000e+00 1153/1186 (97%) EPI463345 A/mallard/Sweden/99957/2009 (A/H6N2) segment 6 (NA) 2006.6 0.000000e+00 1153/1186 (97%) EPI463344 A/mallard/Sweden/99939/2009 (A/H11N2) segment 6 (NA) 2006.6 0.000000e+00 1153/1186 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1170208 A/chicken/Kostroma/1721/2017 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI1170199 A/chicken/Kostroma/1720/2017 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI1170191 A/chicken/Kostroma/1719/2017 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI1170180 A/chicken/Kostroma/1717/2017 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI1158108 A/chicken/Kostroma/1718/2017 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI1010500 A/green-winged teal/Egypt/877/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI1010489 A/green-winged teal/Egypt/871/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI926613 A/domestic duck/Siberia/103/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI926605 A/domestic duck/Siberia/50K/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI925956 A/gadwall/Chany/97/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI1006681 A/common teal/Korea/W549/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI1006680 A/common teal/Korea/W547/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI990794 A/greylag goose/Germany-NI/AR1395-L02144/2017 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI969347 A/turkey/Germany-BB/R377ff/2017 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI952639 A/chicken/Korea/H903/2017 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI909452 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI1034974 A/grey heron/W779/2017 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI1006705 A/common teal/Korea/W555/2017 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI1006704 A/common teal/Korea/W550/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI1006703 A/common teal/Korea/W548/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI990802 A/greylag goose/Germany-NI/AR703-L02138/2017 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI954567 A/turkey/Italy/17VIR538-1/2017 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI952782 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI916604 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI907346 A/domestic duck/Germany-BB/R681ff/2017 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1686/1702 (99%) EPI1176527 A/turkey/Israel/1076/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI1021106 A/mute swan/Czech Republic/1296-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI931207 A/turkey/Germany-BB/R234ff/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI1176530 A/peregrine falcon/Israel/1086/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI1169147 A/chicken/Rostov-on-Don/1321/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI1159809 A/Anser cygnoides/Hubei/FW44/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI954877 A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI954861 A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI954559 A/swan/Italy/17VIR537-2/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI860519 A/goose/Hungary/55128/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI978865 A/mute swan/Germany-TH/R1126/2017 (A/H5N8) segment 4 (HA) 3046.2 0.000000e+00 1685/1704 (98%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI1169201 A/chicken/Rostov-on-Don/1598/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1159825 A/Cygnus atratus/Hubei/HF-1/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1159817 A/Cygnus atratus/Hubei/2Z2-O/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1032549 A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1032532 A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1032524 A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1032508 A/Goose/Hungary/17985/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1032492 A/Goose/Hungary/17051/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1032484 A/Goose/Hungary/15729/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1032476 A/Goose/Hungary/17261/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1021135 A/quail/Czech Republic/2063-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1021132 A/goose/Czech Republic/1954-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1019638 A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1019582 A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1019550 A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1019518 A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI1019510 A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI964917 A/chicken/Czech Republic/206-17_2/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI962046 A/Duck/Hungary/54738/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI961525 A/chicken/Italy/17VIR1751-3/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%)

Isolate detail Isolate name: A/chicken/Kostroma/1721/2017 Isolate ID: EPI_ISL_297466 Passage details/history: original Type: A / H5N2 Lineage: Sample information Collection date: 2017-12-22 Host Gallus gallus domesticus Additional host information: Domestic status: Domestic Is vaccinated: Location: Russian Federation / Kostroma Oblast Additional location information: Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: State Research Center of Virology and Biotechnology (VECTOR) Sample ID given by the submitting laboratory: Authors: Ivan,Susloparov; Natalya,Goncharova; Natalya,Kolosova; Vasiliy,Marchenko; Alexander,Ryzhikov Address: State Research Center of Virology and Biotechnology (VECTOR) Emerging Zoonotic Diseases and Influenza Vector Street Build 12 630559 Koltsovo Russian Federation Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/chicken/Kostroma/1721/2017 2329 EPI1170213 PB1 A/chicken/Kostroma/1721/2017 2329 EPI1170212 PA A/chicken/Kostroma/1721/2017 2221 EPI1170207 HA A/chicken/Kostroma/1721/2017 1776 EPI1170208 NP A/chicken/Kostroma/1721/2017 1565 EPI1170210 NA A/chicken/Kostroma/1721/2017 1394 EPI1170209 MP A/chicken/Kostroma/1721/2017 1027 EPI1170214 NS A/chicken/Kostroma/1721/2017 890 EPI1170211 Submitter information Submitter: Susloparov, Ivan Submission Date: 2018-02-09 Last modifier: Susloparov, Ivan Last modified: 2018-02-11 Address: State Research Center of Virology and Biotechnology (VECTOR) Emerging Zoonotic Diseases and Influenza Vector Street Build 12 630559 Koltsovo Russian Federation

eleased files edit Name Isolate ID Subtype Passage PB2 PB1 PA HA NP NA MP NS HE P3 Collection date edit Name Isolate ID Subtype Passage PB2 PB1 PA HA NP NA MP NS HE P3 Collection date A/chicken/Kostroma/1721/2017 EPI_ISL_297466 H5N2 original 2329 2329 2221 1776 1565 1394 1027 890 --- --- 2017-12-22 A/chicken/Kostroma/1720/2017 EPI_ISL_297465 H5N2 original 2329 2329 2221 1776 1565 1394 1027 890 --- --- 2017-12-22 A/chicken/Kostroma/1719/2017 EPI_ISL_297464 H5N2 original 2329 2329 2221 1776 1565 1394 1027 890 --- --- 2017-12-22 A/chicken/Kostroma/1717/2017 EPI_ISL_297463 H5N2 original 2329 2329 2221 1776 1565 1394 1027 890 --- --- 2017-12-22

Vector Labs has confirmed that the HPAI H5N2 in Kostromskaya Russia is Clade 2.3.4.4 with H5, MP, and PA matching prior clade 2.3.4.4 isolates.

Descriptions Align Segment-ID Name Score E-Value Identity EPI1131100 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 8 (NS) 1559.7 0.000000e+00 844/844 (100%) EPI1123231 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 8 (NS) 1559.7 0.000000e+00 844/844 (100%) EPI1119874 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 8 (NS) 1559.7 0.000000e+00 844/844 (100%) EPI1119866 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 8 (NS) 1559.7 0.000000e+00 844/844 (100%) EPI1144346 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 8 (NS) 1554.2 0.000000e+00 843/844 (99%) EPI1123255 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 8 (NS) 1554.2 0.000000e+00 843/844 (99%) EPI1123239 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 8 (NS) 1554.2 0.000000e+00 843/844 (99%) EPI1144338 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 842/844 (99%) EPI1144354 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 8 (NS) 1544.9 0.000000e+00 841/844 (99%) EPI1139718 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 841/844 (99%) EPI1131092 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 8 (NS) 1530.1 0.000000e+00 838/843 (99%) EPI866979 A/duck/Hungary/60441/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 828/844 (98%) EPI1081973 A/goose/Italy/17VIR6358-3/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1081921 A/swan/Italy/17VIR7064-1/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032556 A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032542 A/Goose/Hungary/64909/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032534 A/Goose/Hungary/63743/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032526 A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032518 A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032510 A/Goose/Hungary/59763/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032502 A/Goose/Hungary/17985/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032494 A/Goose/Hungary/17580/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032486 A/Goose/Hungary/17051/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1032470 A/Goose/Hungary/17261/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI962038 A/Duck/Hungary/54738/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI959557 A/Rook/Hungary/4975/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI959533 A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI956131 A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI954863 A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI954831 A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI954815 A/GuineaFowl/Hungary/596/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI954729 A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI954721 A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI954673 A/Greylag_goose/Hungary/1941/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI954633 A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI866975 A/chicken/Hungary/59048/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI860533 A/duck/Hungary/55191/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI860520 A/goose/Hungary/55128/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI860517 A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 827/844 (97%) EPI1126358 A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1093385 A/mute swan/Czech Republic/1058-17/2017 (H5N8) (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1085346 A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1081898 A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1081886 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1045979 A/unknown/Tatarstan/94/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1045621 A/chicken/Tatarstan/88/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1045599 A/chicken/Shchyolkovo/47/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1032478 A/Goose/Hungary/15729/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1019616 A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1019600 A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1019576 A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1019544 A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1019512 A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1019504 A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1019432 A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1007679 A/peacock/Belgium/1017/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI962059 A/Turkey/Hungary/53136/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI962048 A/Duck/Hungary/55764/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI961471 A/chicken/Sergiyev Posad/39/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI961463 A/chicken/Sergiyev Posad/38/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI961453 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI956122 A/Goose/Hungary/59712/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI954839 A/Mallard/Hungary/5821/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI954823 A/Chicken/Hungary/1751/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI954745 A/Chicken/Hungary/2496/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI954713 A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI954705 A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI953757 A/mallard/Hungary/57857/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI942947 A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI859211 A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 826/844 (97%) EPI1007671 A/chicken/Belgium/807/2017 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 825/844 (97%) EPI1081891 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1045971 A/unknown/Tatarstan/86/2017 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019848 A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019824 A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019816 A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019808 A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019760 A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019728 A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019720 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019712 A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019704 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019696 A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019632 A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019624 A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019584 A/Eur_Wig/NL-Reeuwijk/16015903-003/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019528 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%) EPI1019488 A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 825/844 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1119871 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1119863 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1144343 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1144335 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1131097 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1123238 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1144351 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI1139715 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI1123254 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI1123230 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI1131089 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI961450 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI909453 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1117254 A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1044548 A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019791 A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019783 A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019775 A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019767 A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019759 A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019751 A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019743 A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019695 A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019687 A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019679 A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019663 A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019655 A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019647 A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019479 A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019407 A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019383 A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019367 A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI909461 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019839 A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019831 A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019799 A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019735 A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019719 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019703 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019623 A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019615 A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019607 A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019599 A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019559 A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019543 A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019527 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019511 A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019503 A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019487 A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019471 A/Dk/NL-Kamperveen/16016104-001-005/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019375 A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI954870 A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI954854 A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI954776 A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI942936 A/turkey/England/003778/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909421 A/chicken/Voronezh/20/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909413 A/chicken/Voronezh/19/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909405 A/chicken/Voronezh/18/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909397 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909389 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909381 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI906264 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI860394 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI861394 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP) 2706.5 0.000000e+00 1486/1497 (99%) EPI1040234 A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019863 A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1487/1498 (99%) EPI1019855 A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1487/1498 (99%) EPI1019847 A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019727 A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019711 A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019671 A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019639 A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019631 A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019575 A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019567 A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019463 A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019455 A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019447 A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019439 A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019431 A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019423 A/Ch/NL-Rhenen/16016141-006/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019399 A/Ch/NL-Boven Leeuwen/16016151-006-010/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019391 A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI1019359 A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI990779 A/mute swan/Germany-NI/AR1529-L02145/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI990763 A/eurasian wigeon/Germany-NI/AR249-L02143/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI988592 A/turkey/Germany-NI/R9807/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI959332 A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI954752 A/Peregrine_falcon/Hungary/4882/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI954600 A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI954576 A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI954568 A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI942944 A/chicken/Wales/000023/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI909437 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI909365 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI906263 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI888670 A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI860402 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI859656 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1123257 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1123241 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1119869 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1144349 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI1123233 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI1119861 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI1144341 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI1144333 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI1139713 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI1131095 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI1019770 A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI1019722 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI1019706 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI1019650 A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI1019562 A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI1019442 A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI1019378 A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI1019746 A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI1019690 A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI1019666 A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI1019658 A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI1044547 A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019802 A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019794 A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019738 A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI965226 A/black-tailed godwit/Bangladesh/24734/2015 (A/H7N5) segment 3 (PA) 3744.3 0.000000e+00 2110/2152 (98%) EPI926008 A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI926000 A/mallard/Chany/355/2016 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI925992 A/gadwall/Chany/315/2016 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI925984 A/mallard/Chany/313/2016 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI965379 A/duck/Bangladesh/24697/2015 (A/H15N9) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI965278 A/duck/Bangladesh/24704/2015 (A/H15N9) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI965237 A/duck/Bangladesh/25891/2015 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI963325 A/duck/Bangladesh/24035/2014 (A/H10N1) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3718.4 0.000000e+00 2107/2153 (97%) EPI965322 A/duck/Bangladesh/26918/2015 (A/H3N6) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI884265 A/mallard/Chany/126K-2/2014 (A/H8N4) segment 3 (PA) 3696.3 0.000000e+00 2102/2152 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3685.2 0.000000e+00 2102/2154 (97%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3685.2 0.000000e+00 2102/2154 (97%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3685.2 0.000000e+00 2102/2154 (97%) EPI1006647 A/Anseriformes/Anhui/L25/2014 (A/H1N1) segment 3 (PA) 3679.6 0.000000e+00 2100/2153 (97%) EPI965541 A/duck/Bangladesh/27042/2015 (A/H7N9) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI965406 A/duck/Bangladesh/26980/2015 (A/H7N9) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI925976 A/pintail/Chany/198/2016 (A/H3N8) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI925960 A/teal/Chany/135/2016 (A/H3N8) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3679.6 0.000000e+00 2101/2154 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3679.6 0.000000e+00 2101/2154 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3679.6 0.000000e+00 2101/2154 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3677.8 0.000000e+00 2081/2126 (97%) EPI969334 A/wild bird/Korea/SK14/2014 (A/H1N1) segment 3 (PA) 3674.1 0.000000e+00 2099/2153 (97%) EPI965516 A/duck/Bangladesh/26992/2015 (A/H7N9) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI942184 A/duck/Hubei/ZYSYG15/2015 (A/H6N2) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI942183 A/duck/Hubei/ZYSYG14/2015 (A/H6N2) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI942182 A/duck/Hubei/ZYSYG1/2015 (A/H6N2) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI925968 A/mallard/Chany/185/2016 (A/H3N8) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3674.1 0.000000e+00 2100/2154 (97%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3674.1 0.000000e+00 2100/2154 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3674.1 0.000000e+00 2099/2153 (97%) EPI1006604 A/Anseriformes/Anhui/S3/2014 (A/H1N1) segment 3 (PA) 3668.6 0.000000e+00 2098/2153 (97%) EPI895321 A/Anser fabalis/China/Anhui/L144/2014 (A/H6N1) segment 3 (PA) 3668.6 0.000000e+00 2098/2153 (97%) EPI895305 A/Anser fabalis/China/Anhui/L63/2014 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2098/2153 (97%) EPI895297 A/Anser fabalis/China/Anhui/L9/2014 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2098/2153 (97%) EPI895281 A/Anser fabalis/China/Anhui/S104/2014 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2099/2154 (97%) EPI895265 A/Anser fabalis/China/Anhui/S45/2014 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2099/2154 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI1006661 A/Anseriformes/Anhui/L259/2014 (A/H1N1) segment 3 (PA) 3663.0 0.000000e+00 2098/2154 (97%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3663.0 0.000000e+00 2098/2154 (97%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3663.0 0.000000e+00 2078/2125 (97%) EPI1014810 A/mallard duck/Netherlands/20/2012 (A/H1N1) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI1006618 A/Anseriformes/Anhui/S107/2014 (A/H1N1) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI890476 A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI890244 A/mallard duck/Netherlands/37/2011 (A/H1N1) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI889662 A/mallard duck/Netherlands/7/2012 (A/H1N1) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI1006654 A/Anseriformes/Anhui/L167/2014 (A/H1N1) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI895289 A/Anser fabalis/China/Anhui/S148/2014 (A/H6N2) segment 3 (PA) 3651.9 0.000000e+00 2096/2154 (97%) EPI890932 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 3 (PA) 3651.9 0.000000e+00 2095/2153 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI1014040 A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%) EPI884260 A/mallard/Chany/126K/2014 (A/H5N3) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1119868 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI1123259 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 2 (PB1) 4194.9 0.000000e+00 2273/2274 (99%) EPI1119860 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 2 (PB1) 4194.9 0.000000e+00 2273/2274 (99%) EPI1123235 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 2 (PB1) 4189.3 0.000000e+00 2272/2274 (99%) EPI1144332 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI1131094 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI1123243 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI1144340 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI1144348 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 2 (PB1) 4174.5 0.000000e+00 2270/2275 (99%) EPI1139712 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI1131086 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI909458 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI909450 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI961447 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI1117251 A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019844 A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019836 A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019788 A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019780 A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019724 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019716 A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019708 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019692 A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019684 A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019652 A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019628 A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019596 A/Eur_Wig/NL-Terschelling/16015692-010/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019532 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019460 A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019396 A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019388 A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019380 A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019372 A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1019364 A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI956130 A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI954581 A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI922322 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI860495 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI860390 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI967462 A/domestic duck/Germany-MV/R9764/2016 (A/H5N8) segment 2 (PB1) 4063.7 0.000000e+00 2249/2274 (98%) EPI1044546 A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019876 A/Teal/NL-Ferwert/16015273-013/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019868 A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019860 A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019852 A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019828 A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019820 A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019812 A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019804 A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019796 A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019772 A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019756 A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019668 A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019660 A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019612 A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019572 A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019564 A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019540 A/Eur_Wig/NL-Ferwert/16015273-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019500 A/Eur_Wig/NL-Akkrum/16015817-003/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019484 A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019468 A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019452 A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019420 A/Ch/NL-Hiaure/16016112-001-005/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019412 A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI969252 A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI959329 A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI954781 A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI909362 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI885204 A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI881281 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI881276 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI860398 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI859659 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019764 A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019748 A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019700 A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019556 A/Eur_Wig/NL-Greonterp/16015653-001/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019524 A/Eur_Wig/NL-Drieborg (Dollard)/16015513-001/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI962063 A/Turkey/Hungary/53136/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI954811 A/Greylag_goose/Hungary/320/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI954661 A/Goose/Hungary/1030/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI931205 A/chicken/Germany-MV/R10048/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI909426 A/turkey/Rostov/11/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI859205 A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4052.7 0.000000e+00 2247/2274 (98%) EPI1122891 A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1122875 A/chicken/Greece/39_2017/2017 (A/H5N6) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1032482 A/Goose/Hungary/15729/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019740 A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019732 A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019644 A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019548 A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019516 A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019444 A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1007673 A/peacock/Belgium/1017/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1007665 A/chicken/Belgium/807/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI954875 A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI954867 A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1123242 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI1119867 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI1119859 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI1144331 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI1139711 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI1131093 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI1123258 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI1123234 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI1144347 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI1144339 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%) EPI889820 A/mallard duck/Netherlands/15/2011 (A/H6N8) segment 1 (PB2) 3923.4 0.000000e+00 2228/2280 (97%) EPI889410 A/Eurasian teal/Netherlands/1/2011 (A/H3N8) segment 1 (PB2) 3923.4 0.000000e+00 2228/2280 (97%) EPI889594 A/mallard duck/Netherlands/20/2011 (A/H6N8) segment 1 (PB2) 3912.3 0.000000e+00 2226/2280 (97%) EPI890266 A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI1010712 A/white-fronted goose/Netherlands/5/2011 (A/H6N8) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI1014087 A/mallard duck/Georgia/11/2011 (A/H1N1) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI1013538 A/mallard duck/Netherlands/18/2012 (A/H4N2) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI1011210 A/mallard duck/Netherlands/16/2012 (A/H3N2) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI618045 A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI889776 A/mallard duck/Netherlands/32/2011 (A/H5N2) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI677988 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI560338 A/Italy/3/2013 (A/H7N7) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI678028 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 1 (PB2) 3864.3 0.000000e+00 2217/2280 (97%) EPI678004 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 1 (PB2) 3864.3 0.000000e+00 2217/2280 (97%) EPI677996 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2) 3864.3 0.000000e+00 2217/2280 (97%) EPI678076 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI678060 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI678052 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI678036 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI678012 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 1 (PB2) 3860.6 0.000000e+00 2216/2280 (97%) EPI678068 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI891105 A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI816828 A/turkey/Poland/14/2013 (A/H9N2) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI678084 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI678044 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI678020 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI678092 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 1 (PB2) 3855.1 0.000000e+00 2215/2280 (97%) EPI1013811 A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI341793 A/mallard/France/090360/2009 (A/H9N2) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI773762 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774511 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 1 (PB2) 3829.2 0.000000e+00 2211/2280 (96%) EPI617974 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 1 (PB2) 3829.2 0.000000e+00 2212/2281 (96%) EPI718523 A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI890191 A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI816836 A/turkey/Poland/08/2014 (A/H9N2) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI816844 A/turkey/Poland/09/2014 (A/H9N2) segment 1 (PB2) 3814.5 0.000000e+00 2208/2280 (96%) EPI617882 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 1 (PB2) 3812.6 0.000000e+00 2208/2280 (96%) EPI1036183 A/duck/Moscow/4652/2011 (A/H4N6) segment 1 (PB2) 3808.9 0.000000e+00 2207/2280 (96%) EPI687184 A/chicken/Scotland/532/2016 (A/H5N1) segment 1 (PB2) 3801.5 0.000000e+00 2199/2270 (96%) EPI1133958 A/duck/Mongolia/27/2011 (A/H3N8) segment 1 (PB2) 3796.0 0.000000e+00 2205/2280 (96%) EPI839725 A/chicken/France/150169a/2015 (A/H5N1) segment 1 (PB2) 3779.4 0.000000e+00 2203/2281 (96%) EPI890883 A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 1 (PB2) 3773.8 0.000000e+00 2201/2280 (96%) EPI1014358 A/mallard duck/Netherlands/18/2014 (A/H1N1) segment 1 (PB2) 3768.3 0.000000e+00 2200/2280 (96%) EPI174657 A/duck/Hunan/689/2006 (A/H5N1) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI221999 A/environment/Hunan/1-8/2007 (A/H5N1) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI174670 A/chicken/Hunan/3157/2006 (A/H5N1) segment 1 (PB2) 3740.6 0.000000e+00 2196/2281 (96%) EPI484292 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2) 3736.9 0.000000e+00 2150/2214 (97%) EPI174669 A/chicken/Hubei/3002/2007 (A/H5N1) segment 1 (PB2) 3735.0 0.000000e+00 2194/2280 (96%) EPI174668 A/duck/Hubei/2911/2007 (A/H5N1) segment 1 (PB2) 3735.0 0.000000e+00 2194/2280 (96%) EPI174667 A/chicken/Hubei/2856/2007 (A/H5N1) segment 1 (PB2) 3735.0 0.000000e+00 2194/2280 (96%) EPI174665 A/duck/Hunan/1964/2007 (A/H5N1) segment 1 (PB2) 3735.0 0.000000e+00 2194/2280 (96%) EPI222147 A/lesser kestrel/Heilongjiang/194/2007 (A/H5N1) segment 1 (PB2) 3729.5 0.000000e+00 2193/2280 (96%) EPI839733 A/duck/France/150233/2015 (A/H5N2) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI823778 A/environment/Kamchatka/24/2016 (A/H13N8) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI823762 A/environment/Kamchatka/23/2016 (A/H13N8) segment 1 (PB2) 3720.3 0.000000e+00 2191/2280 (96%) EPI839741 A/duck/France/150236/2015 (A/H5N9) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI262682 A/aquatic bird/Korea/w120/2006 (A/H5N2) segment 1 (PB2) 3718.4 0.000000e+00 2192/2281 (96%) EPI262680 A/aquatic bird/Korea/w113/2006 (A/H5N2) segment 1 (PB2) 3718.4 0.000000e+00 2192/2281 (96%) EPI173585 A/swine/Korea/C12/2008 (A/H5N2) segment 1 (PB2) 3718.4 0.000000e+00 2192/2281 (96%) EPI1013684 A/mallard duck/Netherlands/40/2011 (A/H7N1) segment 1 (PB2) 3712.9 0.000000e+00 2191/2281 (96%) EPI1013496 A/mallard duck/Netherlands/48/2011 (A/H7N1) segment 1 (PB2) 3712.9 0.000000e+00 2191/2281 (96%) EPI889596 A/mallard duck/Netherlands/8/2012 (A/H1N1) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI809271 A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 1 (PB2) 3712.9 0.000000e+00 2191/2281 (96%) EPI262683 A/aquatic bird/Korea/w121/2006 (A/H5N2) segment 1 (PB2) 3712.9 0.000000e+00 2191/2281 (96%) EPI1011215 A/mallard duck/Netherlands/45/2011 (A/H8N1) segment 1 (PB2) 3707.3 0.000000e+00 2190/2281 (96%) EPI940605 A/guinea fowl/France/150207n/2015 (A/H5N9) segment 1 (PB2) 3707.3 0.000000e+00 2190/2281 (96%) EPI890747 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 1 (PB2) 3707.3 0.000000e+00 2190/2281 (96%) EPI889269 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 1 (PB2) 3707.3 0.000000e+00 2190/2281 (96%) EPI889248 A/mallard duck/Netherlands/43/2011 (A/H7N1) segment 1 (PB2) 3707.3 0.000000e+00 2190/2281 (96%) EPI262681 A/aquatic bird/Korea/w114/2006 (A/H5N2) segment 1 (PB2) 3707.3 0.000000e+00 2190/2281 (96%) EPI174662 A/duck/Henan/1652/2006 (A/H5N1) segment 1 (PB2) 3701.8 0.000000e+00 2188/2280 (95%) EPI174660 A/duck/Henan/1647/2006 (A/H5N1) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI961485 A/environment/Kamchatka/117/2016 (A/H13N8) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI167950 A/long-tailed shrike/Hong Kong/2762/2007 (A/H5N1) segment 1 (PB2) 3692.6 0.000000e+00 2171/2257 (96%) EPI222581 A/scaly-breasted munia/Hong Kong/45/2007 (A/H5N1) segment 1 (PB2) 3690.7 0.000000e+00 2176/2265 (96%) EPI220527 A/environment/Hunan/6-69/2008 (A/H5N1) segment 1 (PB2) 3690.7 0.000000e+00 2186/2280 (95%) EPI809383 A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 1 (PB2) 3674.1 0.000000e+00 2185/2282 (95%) EPI1087898 A/ Quail /Egypt/1253V/2016 (A/H9N2) segment 1 (PB2) 3640.9 0.000000e+00 2177/2280 (95%) EPI1086370 A/Chicken/Egypt/374V/2016 (A/H9N2) segment 1 (PB2) 3640.9 0.000000e+00 2179/2282 (95%) EPI1006524 A/duck/Guangxi/015D2/2009 (A/H3N2) segment 1 (PB2) 3640.9 0.000000e+00 2177/2280 (95%) EPI167855 A/crested goshawk/Hong Kong/458/2007 (A/H5N1) segment 1 (PB2) 3635.3 0.000000e+00 2140/2226 (96%) EPI316548 A/spot-billed duck/Korea/KNU SYG06/2006 (A/H5N3) segment 1 (PB2) 3585.5 0.000000e+00 2167/2280 (95%) EPI401812 A/green-winged teal/Xianghai/430/2011 (A/H5N2) segment 1 (PB2) 3579.9 0.000000e+00 2166/2280 (95%) EPI534805 A/duck/Zhejiang/D18/2013 (A/H3N3) segment 1 (PB2) 3574.4 0.000000e+00 2165/2280 (94%) EPI534804 A/duck/Zhejiang/D17/2013 (A/H3N3) segment 1 (PB2) 3574.4 0.000000e+00 2165/2280 (94%) EPI534803 A/duck/Zhejiang/D16/2013 (A/H3N3) segment 1 (PB2) 3574.4 0.000000e+00 2165/2280 (94%) EPI534800 A/duck/Zhejiang/D13/2013 (A/H3N2) segment 1 (PB2) 3574.4 0.000000e+00 2165/2280 (94%) EPI534799 A/duck/Zhejiang/D11/2013 (A/H3N2) segment 1 (PB2) 3574.4 0.000000e+00 2165/2280 (94%) EPI469171 A/wild duck/Guangdong/520/2001 (A/H1N9) segment 1 (PB2) 3574.4 0.000000e+00 2165/2280 (94%) EPI99874 A/duck/Denmark/65047/04 (A/H5N2) segment 1 (PB2) 3574.4 0.000000e+00 2165/2280 (94%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1119873 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI1144353 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1144345 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1144337 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1139717 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1123256 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1123240 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1123232 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1119865 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI1131091 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI1032553 A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1032527 A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1032519 A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1032511 A/Goose/Hungary/59763/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1032503 A/Goose/Hungary/17985/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1032495 A/Goose/Hungary/17580/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1032487 A/Goose/Hungary/17051/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1032479 A/Goose/Hungary/15729/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI962050 A/Duck/Hungary/55764/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI962039 A/Duck/Hungary/54738/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI961503 A/turkey/Italy/17VIR1574-1/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI959534 A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI959427 A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI956123 A/Goose/Hungary/59712/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954832 A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954730 A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954722 A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954714 A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954682 A/Mute swan/Hungary/1955/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954650 A/Duck/Hungary/984/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954634 A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI954594 A/turkey/Italy/17VIR1338-3/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI953518 A/mallard/Hungary/57857/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI866980 A/duck/Hungary/60441/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI860521 A/goose/Hungary/55128/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI860516 A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI859202 A/mute_swan/Hungary/51049/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI1085345 A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 971/982 (98%) EPI969267 A/chicken/Czech Republic/2644-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 971/982 (98%) EPI931199 A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 971/982 (98%) EPI931112 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 971/982 (98%) EPI930844 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 971/982 (98%) EPI930839 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 971/982 (98%) EPI1126346 A/mallard/Czech Republic/136-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1116593 A/mute swan/Czech Republic/54-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1087641 A/chicken/Czech Republic/988-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI1032471 A/Goose/Hungary/17261/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI1002886 A/black swan/Germany-BW/R1364/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI975870 A/white stork/Germany-TH/R1149/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI975869 A/tawny owl/Germany-SN/R1186/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 969/980 (98%) EPI962060 A/Turkey/Hungary/53136/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI961520 A/chicken/Italy/17VIR1751-3/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI961512 A/chicken/Italy/17VIR1684-2/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI959558 A/Rook/Hungary/4975/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI959526 A/Mute swan/Hungary/6092/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI959518 A/Cormorant/Hungary/6102/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI959421 A/domestic goose/Poland/33/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954864 A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954840 A/Mallard/Hungary/5821/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954824 A/Chicken/Hungary/1751/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954746 A/Chicken/Hungary/2496/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954738 A/Mute swan/Hungary/3542/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954706 A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954698 A/Mute swan/Hungary/2193/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954658 A/Goose/Hungary/1030/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954626 A/Mute swan/Hungary/119/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954586 A/turkey/Italy/17VIR973-2/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI954534 A/Goose/Hungary/65817/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI859210 A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI1127018 A/mallard/Czech Republic/1226-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1126383 A/mallard/Czech Republic/1219-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1126370 A/mute swan/Czech Republic/987-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1126361 A/mute swan/Czech Republic/1156-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1126360 A/mute swan/Czech Republic/1155-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1126357 A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1126351 A/mute swan/Czech Republic/967-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1126349 A/mute swan/Czech Republic/572-17_3/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1117249 A/mute swan/Czech Republic/964-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI1081897 A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI987885 A/chicken/Republic of Macedonia/AR1167-L02131/2017 (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI969264 A/chicken/Czech Republic/2643-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI969261 A/mute swan/Czech Republic/1813-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI961530 A/goose/Czech Republic/821-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI961487 A/mute swan/Czech Republic/581-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI961481 A/mute swan/Czech Republic/499-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI931196 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI930842 A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI919638 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI917482 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI916524 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI916387 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 970/982 (98%) EPI888279 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 969/982 (98%) EPI1032543 A/Goose/Hungary/64909/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI1032535 A/Goose/Hungary/63743/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI1019529 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI961452 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI954816 A/GuineaFowl/Hungary/596/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI954690 A/Turkey/Hungary/2030/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI954674 A/Greylag_goose/Hungary/1941/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI1119872 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 6 (NA) 2603.0 0.000000e+00 1409/1409 (100%) EPI1119864 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 6 (NA) 2603.0 0.000000e+00 1409/1409 (100%) EPI1144352 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 6 (NA) 2597.5 0.000000e+00 1408/1409 (99%) EPI1123260 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 6 (NA) 2597.5 0.000000e+00 1408/1409 (99%) EPI1123244 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 6 (NA) 2592.0 0.000000e+00 1407/1409 (99%) EPI1123236 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 6 (NA) 2592.0 0.000000e+00 1407/1409 (99%) EPI1144344 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 6 (NA) 2586.4 0.000000e+00 1406/1409 (99%) EPI1144336 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 6 (NA) 2586.4 0.000000e+00 1406/1409 (99%) EPI1139716 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 6 (NA) 2569.8 0.000000e+00 1403/1409 (99%) EPI1131098 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA) 2566.1 0.000000e+00 1389/1389 (100%) EPI1131090 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA) 2556.9 0.000000e+00 1396/1402 (99%) EPI1129918 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA) 2473.8 0.000000e+00 1339/1339 (100%) EPI1122895 A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 6 (NA) 2447.9 0.000000e+00 1381/1409 (98%) EPI1122887 A/chicken/Greece/39_2017a/2017 (A/H5N6) segment 6 (NA) 2444.2 0.000000e+00 1380/1409 (97%) EPI1122879 A/chicken/Greece/39_2017/2017 (A/H5N6) segment 6 (NA) 2444.2 0.000000e+00 1380/1409 (97%) EPI1129917 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA) 2414.7 0.000000e+00 1317/1322 (99%) EPI1119073 A/spoonbill/Taiwan/DB645/2017 (A/H5N6) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI1127540 A/mute swan/Shimane/3211A001/2017 (A/H5N6) segment 6 (NA) 2398.1 0.000000e+00 1372/1409 (97%) EPI1011098 A/barnacle goose/Netherlands/2/2014 (A/H3N6) segment 6 (NA) 2387.0 0.000000e+00 1372/1411 (97%) EPI1036189 A/duck/Moscow/4652/2011 (A/H4N6) segment 6 (NA) 2305.7 0.000000e+00 1357/1411 (96%) EPI890326 A/mallard duck/Netherlands/19/2012 (A/H4N6) segment 6 (NA) 2287.3 0.000000e+00 1354/1411 (95%) EPI1036196 A/duck/Moscow/4781/2012 (A/H4N6) segment 6 (NA) 2281.7 0.000000e+00 1353/1411 (95%) EPI1145199 A/teal/Croatia/86-25/2012 (A/H4N6) segment 6 (NA) 2276.2 0.000000e+00 1352/1411 (95%) EPI891032 A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 6 (NA) 2226.3 0.000000e+00 1344/1412 (95%) EPI1133993 A/duck/Mongolia/262/2011 (A/H4N6) segment 6 (NA) 2220.8 0.000000e+00 1344/1413 (95%) EPI823917 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 6 (NA) 2220.8 0.000000e+00 1344/1413 (95%) EPI823909 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 6 (NA) 2220.8 0.000000e+00 1344/1413 (95%) EPI823901 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 6 (NA) 2220.8 0.000000e+00 1344/1413 (95%) EPI823790 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 6 (NA) 2220.8 0.000000e+00 1344/1413 (95%) EPI470232 A/duck/Yunnan/87/2007 (A/H7N6) segment 6 (NA) 2220.8 0.000000e+00 1343/1412 (95%) EPI692466 A/duck/Henan/S1091/2010 (A/H4N6) segment 6 (NA) 2215.3 0.000000e+00 1342/1412 (95%) EPI533781 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 6 (NA) 2215.3 0.000000e+00 1342/1412 (95%) EPI533775 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 6 (NA) 2215.3 0.000000e+00 1342/1412 (95%) EPI485322 A/eurasian wigeon/Mongolia/340V/2009 (A/H4N6) segment 6 (NA) 2215.3 0.000000e+00 1342/1412 (95%) EPI692506 A/duck/Hunan/S1012/2009 (A/H4N6) segment 6 (NA) 2204.2 0.000000e+00 1340/1412 (94%) EPI1014700 A/mallard duck/Netherlands/7/2006 (A/H10N6) segment 6 (NA) 2198.6 0.000000e+00 1339/1412 (94%) EPI692346 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 6 (NA) 2198.6 0.000000e+00 1339/1412 (94%) EPI692338 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 6 (NA) 2198.6 0.000000e+00 1339/1412 (94%) EPI414148 A/duck/Jiangsu/4/2010 (A/H3N6) segment 6 (NA) 2198.6 0.000000e+00 1339/1412 (94%) EPI407862 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 6 (NA) 2194.9 0.000000e+00 1338/1412 (94%) EPI372354 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 6 (NA) 2194.9 0.000000e+00 1339/1412 (94%) EPI1013418 A/mallard duck/Netherlands/8/2006 (A/H10N6) segment 6 (NA) 2193.1 0.000000e+00 1338/1412 (94%) EPI395392 A/chicken/India/WB-NIV101006/2009 (A/H4N6) segment 6 (NA) 2193.1 0.000000e+00 1338/1412 (94%) EPI296530 A/mallard/Netherlands/4/2006 (A/H10N6) segment 6 (NA) 2193.1 0.000000e+00 1338/1412 (94%) EPI890683 A/mallard duck/Netherlands/6/2006 (A/H4N6) segment 6 (NA) 2187.6 0.000000e+00 1337/1412 (94%) EPI243479 A/duck/Vietnam/OIE-2454/2009 (A/H4N6) segment 6 (NA) 2187.6 0.000000e+00 1338/1413 (94%) EPI401303 A/duck/Korea/DY104/2007 (A/H4N6) segment 6 (NA) 2182.0 0.000000e+00 1336/1412 (94%) EPI168523 A/common pochard/Aktau/1455/2006 (A/H4N6) segment 6 (NA) 2176.5 0.000000e+00 1336/1413 (94%) EPI168522 A/coot/Aktau/1454/2006 (A/H4N6) segment 6 (NA) 2170.9 0.000000e+00 1336/1414 (94%) EPI513237 A/mallard/Sweden/104925/2009 (A/H4N6) segment 6 (NA) 2165.4 0.000000e+00 1334/1413 (94%) EPI704432 A/duck/Mongolia/769/2015 (A/H4N6) segment 6 (NA) 2159.9 0.000000e+00 1335/1415 (94%) EPI540366 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 6 (NA) 2159.9 0.000000e+00 1333/1413 (94%) EPI513749 A/mallard/Sweden/79978/2008 (A/H4N6) segment 6 (NA) 2154.3 0.000000e+00 1331/1412 (94%) EPI395393 A/chicken/India/WB-NIV101018/2009 (A/H4N6) segment 6 (NA) 2148.8 0.000000e+00 1331/1413 (94%) EPI513568 A/mallard/Sweden/80348/2008 (A/H0) segment 6 (NA) 2143.2 0.000000e+00 1330/1413 (94%) EPI485357 A/ruddy shelduck/Mongolia/592/2010 (A/H8N6) segment 6 (NA) 2143.2 0.000000e+00 1330/1413 (94%) EPI284397 A/mallard/Czech Republic/12652/2007 (A/H4N6) segment 6 (NA) 2143.2 0.000000e+00 1327/1409 (94%) EPI704293 A/duck/Mongolia/127/2015 (A/H4N6) segment 6 (NA) 2137.7 0.000000e+00 1331/1415 (94%) EPI704269 A/duck/Mongolia/101/2015 (A/H4N6) segment 6 (NA) 2137.7 0.000000e+00 1331/1415 (94%) EPI540374 A/duck/Bangladesh/1283/2008 (A/H4N6) segment 6 (NA) 2137.7 0.000000e+00 1330/1414 (94%) EPI1013677 A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 6 (NA) 2132.2 0.000000e+00 1328/1413 (93%) EPI1011235 A/mallard duck/Netherlands/22/2011 (A/H4N6) segment 6 (NA) 2132.2 0.000000e+00 1328/1413 (93%) EPI889824 A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 6 (NA) 2132.2 0.000000e+00 1328/1413 (93%) EPI540358 A/duck/Bangladesh/1766/2010 (A/H4N6) segment 6 (NA) 2132.2 0.000000e+00 1327/1412 (93%) EPI513170 A/mallard/Sweden/105012/2009 (A/H4N6) segment 6 (NA) 2132.2 0.000000e+00 1328/1413 (93%) EPI965451 A/duck/Bangladesh/26974/2015 (A/H3N6) segment 6 (NA) 2126.6 0.000000e+00 1330/1416 (93%) EPI618783 A/mallard/Sweden/93475/2009 (A/H10N6) segment 6 (NA) 2126.6 0.000000e+00 1328/1414 (93%) EPI513546 A/mallard/Sweden/101010/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513461 A/mallard/Sweden/101632/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513454 A/mallard/Sweden/101603/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513433 A/mallard/Sweden/101564/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513431 A/mallard/Sweden/101785/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513415 A/mallard/Sweden/101733/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513408 A/mallard/Sweden/101663/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513394 A/mallard/Sweden/101654/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513358 A/mallard/Sweden/101831/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513341 A/mallard/Sweden/104681/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513230 A/mallard/Sweden/104839/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI513163 A/mallard/Sweden/105011/2009 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI470233 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 6 (NA) 2126.6 0.000000e+00 1326/1412 (93%) EPI461617 A/duck/Hunan/S11893/2012 (A/H4N6) segment 6 (NA) 2126.6 0.000000e+00 1327/1413 (93%) EPI965498 A/duck/Bangladesh/26920/2015 (A/H3N6) segment 6 (NA) 2121.1 0.000000e+00 1329/1416 (93%) EPI965369 A/duck/Bangladesh/26948/2015 (A/H3N6) segment 6 (NA) 2121.1 0.000000e+00 1329/1416 (93%) EPI965295 A/duck/Bangladesh/26918/2015 (A/H3N6) segment 6 (NA) 2121.1 0.000000e+00 1329/1416 (93%) EPI692554 A/duck/Jiangxi/S2443/2012 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI540382 A/duck/Bangladesh/1784/2010 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1325/1412 (93%) EPI540350 A/duck/Bangladesh/1783/2010 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1325/1412 (93%) EPI514901 A/mallard/Sweden/105093/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513514 A/mallard/Sweden/101524/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1327/1414 (93%) EPI513507 A/mallard/Sweden/101504/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513493 A/mallard/Sweden/101329/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513475 A/mallard/Sweden/101642/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513468 A/mallard/Sweden/101640/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1327/1414 (93%) EPI513424 A/mallard/Sweden/101782/2009 (A/H0) segment 6 (NA) 2121.1 0.000000e+00 1327/1414 (93%) EPI513386 A/mallard/Sweden/102029/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513379 A/mallard/Sweden/102024/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513334 A/mallard/Sweden/102157/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513327 A/mallard/Sweden/102124/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1327/1414 (93%) EPI513320 A/mallard/Sweden/102114/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%) EPI513306 A/mallard/Sweden/102045/2009 (A/H4N6) segment 6 (NA) 2121.1 0.000000e+00 1326/1413 (93%)