niman

Align Segment-ID Name Score E-Value Identity EPI576169 A/Guangzhou/39715/2014 (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI656646 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI661659 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI656598 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI599279 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI599256 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI598628 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI775296 A/duck/Guangzhou/021/2014 (A/H5N6) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI656654 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI656622 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI598627 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI659163 A/environment/Yunnan/03.15 DQWGH008-Z/2015(H5N6) (A/H5N6) segment 3 (PA) 3886.5 0.000000e+00 2122/2131 (99%) EPI656718 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI656638 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI656630 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI599260 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI599255 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI530053 A/duck/Jiangxi/95/2014 (A/H5N6) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI775288 A/duck/Guangzhou/018/2014 (A/H5N6) segment 3 (PA) 3879.1 0.000000e+00 2135/2152 (99%) EPI656958 A/duck/Hunan/02.26 YYGK286-P/2014(H5N6) (A/H5N6) segment 3 (PA) 3879.1 0.000000e+00 2135/2152 (99%) EPI644692 A/swine/Guangdong/1/2014 (A/H5N6) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI599258 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI598629 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI568439 A/goose/Shantou/1806/2014 (A/H5N6) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI687497 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI659091 A/chicken/Yunnan/03.15 DQJT0054-Z-P/2015(H5N6) (A/H5N6) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI598626 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI568438 A/goose/Shantou/1791/2014 (A/H5N6) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI568437 A/goose/Shantou/1763/2014 (A/H5N6) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI599253 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 3 (PA) 3869.9 0.000000e+00 2132/2151 (99%) EPI687538 A/Goose/ Guangdong /SSLBY/2015（H5N6） (A/H5N6) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI683228 A/duck/Wuhan/WHYF03/2015 (A/H5N6) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI683227 A/duck/Wuhan/WHYF02/2015 (A/H5N6) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI662011 A/duck/Guangdong/04.16 SZLGDBL013/2015(H5N6) (A/H5N6) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI599259 A/duck/Dongguan/3069/2013 (A/H5N6) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI599257 A/duck/Dongguan/2685/2013 (A/H5N6) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI687522 A/Chicken/Guangdong/FG594/2015（H5N6） (A/H5N6) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI681266 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI644693 A/swine/Guangdong/2/2014 (A/H5N6) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI549735 A/duck/Laos/XBY004/2014 (A/H5N6) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI549734 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 3 (PA) 3860.6 0.000000e+00 2130/2150 (99%) EPI837501 A/chicken/Heilongjiang/S7/2014 (A/H5N2) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI760115 A/tiger/Yunnan/tig1404/2014 (A/H5N1) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI736913 A/Changsha/1/2014 (A/H5N6) segment 3 (PA) 3856.9 0.000000e+00 2131/2152 (99%) EPI681265 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI681257 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI599252 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI598625 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI760096 A/feline/Guangdong/2/2015 (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI760092 A/feline/Guangdong/1/2015 (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI683231 A/duck/Wuhan/JXYFB22/2015 (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI662059 A/environment/Guangdong/04.16 SZLGWL006/2015(Mixed) (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI662043 A/duck/Guangdong/04.16 SZLGDBL009/2015(H5N6) (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI661843 A/duck/Guangdong/02.11 DGCP094-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI596609 A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI590803 A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI590802 A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI580421 A/feline/Guangdong/2/2014(H5N6) (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI580407 A/feline/Guangdong/1/2014(H5N6) (A/H5N6) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI661395 A/duck/Guangdong/04.16 LGDBL001/2015(Mixed) (A/H5N6) segment 3 (PA) 3849.5 0.000000e+00 2128/2150 (98%) EPI596597 A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 3 (PA) 3847.7 0.000000e+00 2128/2151 (98%) EPI596591 A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 3 (PA) 3847.7 0.000000e+00 2128/2151 (98%) EPI596579 A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 3 (PA) 3847.7 0.000000e+00 2128/2151 (98%) EPI596573 A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 3 (PA) 3847.7 0.000000e+00 2128/2151 (98%) EPI681267 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI681258 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI681256 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI664457 A/duck/Hunan/12.17 YYFQH0072-O/2014(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI664241 A/duck/Guangdong/04.23 DGQTXC185-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI662091 A/environment/Guangdong/04.16 SZLGWLShui5/2015(H5N6) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI662027 A/duck/Guangdong/04.16 SZLGDBL003/2015(H5N6) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI661827 A/duck/Guangdong/02.11 DGCP092-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI661731 A/duck/Guangdong/02.11 DGCP104-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI661723 A/duck/Guangdong/02.11 DGCP103-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI661715 A/duck/Guangdong/02.11 DGCP102-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI661363 A/duck/Guangdong/03.27 DGQTXC190-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI661299 A/duck/Guangdong/04.23 DGQTXC183-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI661259 A/duck/Guangdong/04.23 DGQTXC206-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI659931 A/duck/Guangdong/03.26 DGCP081-P/2015(H5N6) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI657494 A/environment/Jilin/04.25 NA004/2015(H5N6) (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI596621 A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI596615 A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI596603 A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI596585 A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI576170 A/duck/Guangzhou/41227/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI531455 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI662067 A/pigeon/Guangdong/04.16 SZLGWL006/2015(H5N6) (A/H5N6) segment 3 (PA) 3844.0 0.000000e+00 2127/2150 (98%) EPI659947 A/duck/Guangdong/03.26 DGCP084-P/2015(H5N6) (A/H5N6) segment 3 (PA) 3844.0 0.000000e+00 2127/2150 (98%) EPI691553 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2128/2152 (98%) EPI683226 A/turtledove/Wuhan/HKBJ43/2015 (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI683225 A/turtledove/Wuhan/WHBJ12/2014 (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI683224 A/turtledove/Wuhan/HKBJ27/2015 (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI683223 A/turtledove/Wuhan/WHBJ28/2014 (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI683222 A/turtledove/Wuhan/HKBJ07/2015 (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI683221 A/turtledove/Wuhan/WHBJ26/2014 (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI664433 A/duck/Hunan/12.17 YYFQH0046-1-O/2014(Mixed) (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI664361 A/duck/Guangdong/04.23 DGQTSJ147-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI664345 A/duck/Guangdong/04.23 DGQTXC230-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI664329 A/duck/Guangdong/04.23 DGQTSJ148-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%) EPI664257 A/duck/Guangdong/04.23 DGQTXC231-P/2015(Mixed) (A/H5N6) segment 3 (PA) 3840.3 0.000000e+00 2127/2151 (98%)

Align Segment-ID Name Score E-Value Identity EPI593888 A/Guangzhou/39715/2014 (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI687504 A/Duck/Guangdong/PY501/2014（H5N6） (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI661661 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI656632 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI550762 A/duck/Laos/XBY004/2014 (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI550751 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI691376 A/ Guangdong /ZQ874/2015（H5N6） (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI656720 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI656640 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI602497 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI599338 A/duck/Dongguan/3069/2013 (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI599319 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI599312 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI599291 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI656656 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI656624 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI602490 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI599326 A/duck/Dongguan/2685/2013 (A/H5N6) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI760094 A/feline/Guangdong/1/2015 (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI687496 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI662077 A/environment/Guangdong/04.16 SZLGWLShui1/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2261/2271 (99%) EPI662037 A/duck/Guangdong/04.16 SZLGDBL005/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI660701 A/goose/Guangdong/04.23 DGQTXC236-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI660669 A/duck/Guangdong/04.23 DGQTXC236-P/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI645047 A/swine/Guangdong/2/2014 (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI599345 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI580406 A/feline/Guangdong/1/2014(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI661413 A/duck/Guangdong/04.16 LGDBL004/2015(Mixed) (A/H5N6) segment 2 (PB1) 4137.6 0.000000e+00 2262/2273 (99%) EPI659093 A/chicken/Yunnan/03.15 DQJT0054-Z-P/2015(H5N6) (A/H5N6) segment 2 (PB1) 4137.6 0.000000e+00 2258/2267 (99%) EPI662053 A/duck/Guangdong/04.16 SZLGWL002/2015(H5N6) (A/H5N6) segment 2 (PB1) 4135.8 0.000000e+00 2261/2272 (99%) EPI656648 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 2 (PB1) 4135.8 0.000000e+00 2261/2272 (99%) EPI775297 A/duck/Guangzhou/021/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI775289 A/duck/Guangzhou/018/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI760100 A/feline/Guangdong/2/2015 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI664555 A/duck/Hunan/03.09 YYFQH0046-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI661805 A/environment/Guangdong/02.11 DGCPSJ050/2015(Mixed) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI661797 A/environment/Guangdong/02.11 DGQTSJ046E/2015(Mixed) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI661733 A/duck/Guangdong/02.11 DGCP104-P/2015(Mixed) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI660765 A/duck/Guangdong/04.23 DGQTSJ130-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI660693 A/duck/Guangdong/04.23 DGQTSJ131-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI660677 A/duck/Guangdong/04.23 DGQTXC213-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI658789 A/duck/Hunan/01.21 YYFQH011-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI656600 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2256/2265 (99%) EPI596620 A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596614 A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596608 A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596602 A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596596 A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596590 A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596584 A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596578 A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI596572 A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2260/2271 (99%) EPI580420 A/feline/Guangdong/2/2014(H5N6) (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI661613 A/duck/Guangdong/03.26 DGCP075-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4132.1 0.000000e+00 2261/2273 (99%) EPI661325 A/duck/Guangdong/04.23 DGQTSJ135-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4132.1 0.000000e+00 2261/2273 (99%) EPI661317 A/duck/Guangdong/04.23 DGQTSJ135-P/2015(Mixed) (A/H5N6) segment 2 (PB1) 4132.1 0.000000e+00 2261/2273 (99%) EPI659053 A/duck/Hunan/01.21 YYFQH007-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4132.1 0.000000e+00 2259/2270 (99%) EPI661717 A/duck/Guangdong/02.11 DGCP102-P/2015(Mixed) (A/H5N6) segment 2 (PB1) 4130.2 0.000000e+00 2260/2272 (99%) EPI661477 A/duck/Guangdong/03.27 DGQTSJ129-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4130.2 0.000000e+00 2260/2272 (99%) EPI661309 A/duck/Guangdong/04.23 DGQTXC204-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4130.2 0.000000e+00 2260/2272 (99%) EPI661293 A/duck/Guangdong/04.23 DGQTSJ128-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4130.2 0.000000e+00 2260/2272 (99%) EPI659021 A/duck/Hunan/01.21 YYFQH005-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4130.2 0.000000e+00 2258/2269 (99%) EPI668785 A/duck/Yunnan/07.15 DQNPH129/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI668763 A/duck/Yunnan/07.15 DQNPH124/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI668752 A/goose/Yunnan/07.14 DQWCK122/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI664459 A/duck/Hunan/12.17 YYFQH0072-O/2014(Mixed) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI664291 A/duck/Guangdong/04.22 DGCP083-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI661845 A/duck/Guangdong/02.11 DGCP094-P/2015(Mixed) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI661837 A/duck/Guangdong/02.11 DGCP093-P/2015(Mixed) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI661349 A/duck/Guangdong/04.23 DGQTSJ138-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2259/2271 (99%) EPI660661 A/duck/Guangdong/04.23 DGQTXC213-P/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2259/2271 (99%) EPI660061 A/duck/Guangdong/04.23 DGQTXC202-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI658957 A/duck/Hunan/01.21 YYFQH027-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2259/2271 (99%) EPI658845 A/duck/Hunan/01.21 YYFQH016-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2259/2271 (99%) EPI658829 A/duck/Hunan/02.07 YYFQH015-P/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2257/2268 (99%) EPI599365 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI599298 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI530052 A/duck/Jiangxi/95/2014 (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI659045 A/duck/Hunan/01.21 YYFQH006-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4126.5 0.000000e+00 2260/2273 (99%) EPI659005 A/duck/Hunan/01.21 YYFQH003-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4126.5 0.000000e+00 2256/2267 (99%) EPI668817 A/chicken/Yunnan/07.11 DQENM005/2015(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI668780 A/duck/Yunnan/07.15 DQNPH127/2015(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI668774 A/duck/Yunnan/07.15 DQNPH125/2015(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI668748 A/goose/Yunnan/07.14 DQWCK119/2015(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI664323 A/duck/Guangdong/03.27 DGQTSJ133-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI661725 A/duck/Guangdong/02.11 DGCP103-P/2015(Mixed) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI661037 A/environment/Jiangxi/01.08 YGCB007/2015(Mixed) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI659085 A/environment/Yunnan/03.16 DQXYL0053-Z-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2258/2271 (99%) EPI658717 A/duck/Hunan/04.22 LDDX037-P/2015(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI657736 A/duck/Hunan/12.17 YYGK0063-O/2014(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2258/2271 (99%) EPI657352 A/duck/Hunan/12.17 YYFQH052-P/2014(H5N6) (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2258/2271 (99%) EPI602476 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI602418 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI599661 A/goose/Shantou/1806/2014 (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI599284 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI661621 A/duck/Guangdong/03.26 DGCP082-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4121.0 0.000000e+00 2255/2267 (99%) EPI660597 A/duck/Guangdong/04.22 DGCP080-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4121.0 0.000000e+00 2259/2273 (99%) EPI660517 A/duck/Guangdong/04.23 DGQTXC202-P/2015(H5N6) (A/H5N6) segment 2 (PB1) 4121.0 0.000000e+00 2257/2270 (99%) EPI658925 A/duck/Hunan/01.21 YYFQH023-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4121.0 0.000000e+00 2253/2264 (99%) EPI658837 A/duck/Hunan/01.21 YYFQH015-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4119.1 0.000000e+00 2252/2263 (99%)

ACTIVE INVESTIGATIONS Information on Active Investigations When a local case of Zika virus is confirmed through laboratory testing, the department conducts a thorough investigation around the case to determine if additional people are infected. The department interviews and tests close contacts and community members around the case. Knowing if additional people are infected helps the department determine if there is a zone where mosquitoes are transmitting the virus. Not every case results in a designation of active transmission in an area. In some instances, a case of Zika is an isolated incident with no additional people infected. For more information on the department’s testing and investigation process, click here. paragraph break Current Number of Active Investigations: 10 Miami-Dade County: 6 open investigations Unknown: 4 open investigations. paragraph break Current Number of Closed Investigations: 42 Miami-Dade County: 34 closed investigations Palm Beach County: 6 closed investigation Broward County: 1 closed investigation Pinellas: 1 closed investigation paragraph break Sampling Activities For Active Investigations Miami Beach in Miami-Dade County (Area of Active Transmission) Total # of Samples Collected Positive Negative Pending Results 1,067 75 992 0 paragraph brea Miami-Dade Investigations Outside of Areas of Active Transmission – 6 Investigations Total # of Samples Collected Positive Negative Pending Results 52 2 49 1 paragraph break Wynwood Area in Miami-Dade County – Note: This investigation is closed, but the department is providing the sampling results below for reference. Total # of Samples Collected Positive Negative Pending Results 525 33 491 0 Little River in Miami-Dade County (Area of Active Transmission) Note: This investigation is closed, but the department is providing the sampling results below for reference. Total # of Samples Collected Positive Negative Pending Results 118 9 109 0 Data as of Dec. 09, 2016 – 4:15 p.m. ET http://www.floridahealth.gov/diseases-and-conditions/zika-virus/index.html?utm_source=flhealthIndex

December 9, 2016 Department of Health Daily Zika Update Contact: Communications [email protected] (850) 245-4111 Tallahassee, Fla.—In an effort to keep Florida residents and visitors safe and aware about the status of the Zika virus, the department will issue a Zika virus update each week day. Updates will include a Zika case count by county and information to keep Floridians informed and prepared. In order to keep the public informed, the department has posted our investigation process here. There are three new travel-related cases today with one in Miami-Dade, one in Broward and Palm Beach. There no new locally acquired cases today. The total number of Zika cases reported in Florida as of today is 1,247. Infection Type Infection Count Travel-Related Infections of Zika 983 Locally Acquired Infections of Zika 249 Undetermined 15 Pregnant Women with Lab-Evidence of Zika 187 Note, these categories are not mutually exclusive and cannot be added together. Please visit our website to see the full list of travel-related cases by county. Today, Governor Rick Scott announced that the department has cleared the Miami Beach area of ongoing, active Zika transmission. The newly cleared area is about 1.5 square miles between 8th and 28th streets. Florida no longer has any identified areas with active Zika transmission. DOH continues outreach and targeted testing in Miami-Dade County and mosquito abatement and reduction activities are also taking place around the locations that are being investigated. One case does not mean ongoing active transmission is taking place. DOH conducts a thorough investigation by sampling close contacts and community members around each case to determine if additional people are infected. If DOH finds evidence that active transmission is occurring in an area, the media and the public will be notified. The timelines below are as of Dec. 9. Note: asymptomatic cases are not reflected as they do not have symptom on-set dates. click image above to enlarge click image above to enlarge click image above to enlarge The department is currently conducting 10 active investigations. The department has closed 42 investigations. Information regarding the investigations can be found here. If investigations reveal additional areas of active transmission, the department will announce a defined area of concern. The department has conducted Zika virus testing for more than 10,964 people statewide. Florida currently has the capacity to test 6,154 people for active Zika virus and 5,546 for Zika antibodies. At Governor Scott’s direction, all county health departments now offer free Zika risk assessment and testing to pregnant women. Florida’s small case cluster is not considered widespread transmission, however, pregnant women are advised to avoid non-essential travel to the impacted area in Miami-Dade County (see map below). If you are pregnant and must travel or if you live or work in the impacted area, protect yourself from mosquito bites by wearing insect repellent, long clothing and limiting your time outdoors. According to CDC guidance, providers should test all pregnant women who lived in, traveled to or whose partner traveled to Miami-Dade County after Aug. 1, 2016. It is also recommended that all pregnant women who reside in or travel frequently to the area where active transmission is likely occurring be tested for Zika in the first and second trimester. Pregnant women in the identified area can contact their medical provider or their local county health department to be tested and receive a Zika prevention kit. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Additionally, the department is working closely with the Healthy Start Coalition of Miami-Dade County to identify pregnant women in the impacted areas to ensure they have access to resources and information to protect themselves. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Pregnant women can contact their local county health department for Zika risk assessment and testing hours and information. A Zika risk assessment will be conducted by county health department staff and blood and/or urine samples may be collected and sent to labs for testing. It may take one to two weeks to receive results. Florida has been monitoring pregnant women with evidence of Zika regardless of symptoms. The total number of pregnant women who have been or are being monitored is 187. On Feb. 12, Governor Scott directed the State Surgeon General to activate a Zika Virus Information Hotline for current Florida residents and visitors, as well as anyone planning on traveling to Florida in the near future. The hotline, managed by the Department of Health, has assisted 7,997 callers since it launched. The number for the Zika Virus Information Hotline is 1-855-622-6735. The department urges Floridians to drain standing water weekly, no matter how seemingly small. A couple drops of water in a bottle cap can be a breeding location for mosquitoes. Residents and visitors also need to use repellents when enjoying the Florida outdoors. For more information on DOH action and federal guidance, please click here. For resources and information on Zika virus, click here. About the Florida Department of Health The department, nationally accredited by the Public Health Accreditation Board, works to protect, promote, and improve the health of all people in Florida through integrated state, county and community efforts. Follow us on Twitter at @HealthyFla and on Facebook. For more information about the Florida Department of Health, please visit www.FloridaHealth.gov.

There are three new travel-related cases today with one in Miami-Dade, one in Broward and Palm Beach. There no new locally acquired cases today. The total number of Zika cases reported in Florida as of today is 1,247. http://www.floridahealth.gov/newsroom/2016/12/120916-zika-update.html

December 8, 2016 Department of Health Daily Zika Update Contact: Communications [email protected] (850) 245-4111 Tallahassee, Fla.—In an effort to keep Florida residents and visitors safe and aware about the status of the Zika virus, the department will issue a Zika virus update each week day. Updates will include a Zika case count by county and information to keep Floridians informed and prepared. In order to keep the public informed, the department has posted our investigation process here. There are eight new travel-related cases today with four in Orange, one in Broward, one in Miami-Dade, one in Hillsborough and one in Osceola counties. There no new locally acquired cases today. The total number of Zika cases reported in Florida as of today is 1,244. Infection Type Infection Count Travel-Related Infections of Zika 980 Locally Acquired Infections of Zika 249 Undetermined 15 Pregnant Women with Lab-Evidence of Zika 185 ote, these categories are not mutually exclusive and cannot be added together. Please visit our website to see the full list of travel-related cases by county. To date, the Zika zones in Wynwood, North Miami Beach and Little River have been lifted after 45 days with no evidence of active transmission and no additional people infected. The Wynwood zone was lifted September 19, the North Miami Beach zone was lifted November 22 and the Little River zone was lifted December 2. The only remaining area of active transmission is approximately 1.5 square miles in South Miami Beach, please see map below. DOH continues outreach and targeted testing in Miami-Dade County and mosquito abatement and reduction activities are also taking place around the locations that are being investigated. One case does not mean ongoing active transmission is taking place. DOH conducts a thorough investigation by sampling close contacts and community members around each case to determine if additional people are infected. If DOH finds evidence that active transmission is occurring in an area, the media and the public will be notified. The timelines below are as of Dec. 2. Note: asymptomatic cases are not reflected as they do not have symptom on-set dates. click image above to enlarge click image above to enlarge click image above to enlarge The department is currently conducting 11 active investigations. The department has closed 41 investigations. Information regarding the investigations can be found here. If investigations reveal additional areas of active transmission, the department will announce a defined area of concern. The department has conducted Zika virus testing for more than 10,896 people statewide. Florida currently has the capacity to test 6,242 people for active Zika virus and 5,606 for Zika antibodies. At Governor Scott’s direction, all county health departments now offer free Zika risk assessment and testing to pregnant women. Florida’s small case cluster is not considered widespread transmission, however, pregnant women are advised to avoid non-essential travel to the impacted area in Miami-Dade County (see map below). If you are pregnant and must travel or if you live or work in the impacted area, protect yourself from mosquito bites by wearing insect repellent, long clothing and limiting your time outdoors. According to CDC guidance, providers should test all pregnant women who lived in, traveled to or whose partner traveled to Miami-Dade County after Aug. 1, 2016. It is also recommended that all pregnant women who reside in or travel frequently to the area where active transmission is likely occurring be tested for Zika in the first and second trimester. Pregnant women in the identified area can contact their medical provider or their local county health department to be tested and receive a Zika prevention kit. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Additionally, the department is working closely with the Healthy Start Coalition of Miami-Dade County to identify pregnant women in the impacted areas to ensure they have access to resources and information to protect themselves. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Pregnant women can contact their local county health department for Zika risk assessment and testing hours and information. A Zika risk assessment will be conducted by county health department staff and blood and/or urine samples may be collected and sent to labs for testing. It may take one to two weeks to receive results. Florida has been monitoring pregnant women with evidence of Zika regardless of symptoms. The total number of pregnant women who have been or are being monitored is 185. On Feb. 12, Governor Scott directed the State Surgeon General to activate a Zika Virus Information Hotline for current Florida residents and visitors, as well as anyone planning on traveling to Florida in the near future. The hotline, managed by the Department of Health, has assisted 7,951 callers since it launched. The number for the Zika Virus Information Hotline is 1-855-622-6735. The department urges Floridians to drain standing water weekly, no matter how seemingly small. A couple drops of water in a bottle cap can be a breeding location for mosquitoes. Residents and visitors also need to use repellents when enjoying the Florida outdoors. For more information on DOH action and federal guidance, please click here. For resources and information on Zika virus, click here. click image above to enlarge About the Florida Department of Health The department, nationally accredited by the Public Health Accreditation Board, works to protect, promote, and improve the health of all people in Florida through integrated state, county and community efforts. Follow us on Twitter at @HealthyFla and on Facebook. For more information about the Florida Department of Health, please visit www.FloridaHealth.gov.

There are eight new travel-related cases today with four in Orange, one in Broward, one in Miami-Dade, one in Hillsborough and one in Osceola counties. There no new locally acquired cases today. The total number of Zika cases reported in Florida as of today is 1,244. http://www.floridahealth.gov/newsroom/2016/12/120816-zika-update.html

December 7, 2016 Department of Health Daily Zika Update Contact: Communications [email protected] (850) 245-4111 Tallahassee, Fla.—In an effort to keep Florida residents and visitors safe and aware about the status of the Zika virus, the department will issue a Zika virus update each week day. Updates will include a Zika case count by county and information to keep Floridians informed and prepared. In order to keep the public informed, the department has posted our investigation process here. There are three new travel-associated cases today with one in Miami-Dade, one in Hillsborough and one in Martin counties. There are five new locally acquired cases today in Miami-Dade County. All five cases had symptom on-set in September and October and they do not impact the lifting of Zika zones in Little River, North Miami Beach or Wynwood. The department recently concluded the investigation process for these cases to rule out travel and classify the cases as locally acquired. The total number of Zika cases reported in Florida as of today is 1,236. Infection Type Infection Count Travel-Related Infections of Zika 972 Locally Acquired Infections of Zika 249 Undetermined 15 Pregnant Women with Lab-Evidence of Zika 180 Note, these categories are not mutually exclusive and cannot be added together. Please visit our website to see the full list of travel-related cases by county. To date, the Zika zones in Wynwood, North Miami Beach and Little River have been lifted after 45 days with no evidence of active transmission and no additional people infected. The Wynwood zone was lifted September 19, the North Miami Beach zone was lifted November 22 and the Little River zone was lifted December 2. The only remaining area of active transmission is approximately 1.5 square miles in South Miami Beach, please see map below. DOH continues outreach and targeted testing in Miami-Dade County and mosquito abatement and reduction activities are also taking place around the locations that are being investigated. One case does not mean ongoing active transmission is taking place. DOH conducts a thorough investigation by sampling close contacts and community members around each case to determine if additional people are infected. If DOH finds evidence that active transmission is occurring in an area, the media and the public will be notified. The timelines below are as of Dec. 2. Note: asymptomatic cases are not reflected as they do not have symptom on-set dates. click image above to enlarge click image above to enlarge click image above to enlarge The department is currently conducting 11 active investigations. The department has closed 41 investigations. Information regarding the investigations can be found here. If investigations reveal additional areas of active transmission, the department will announce a defined area of concern. The department has conducted Zika virus testing for more than 10,839 people statewide. Florida currently has the capacity to test 6,321 people for active Zika virus and 4,786 for Zika antibodies. At Governor Scott’s direction, all county health departments now offer free Zika risk assessment and testing to pregnant women. Florida’s small case cluster is not considered widespread transmission, however, pregnant women are advised to avoid non-essential travel to the impacted area in Miami-Dade County (see map below). If you are pregnant and must travel or if you live or work in the impacted area, protect yourself from mosquito bites by wearing insect repellent, long clothing and limiting your time outdoors. According to CDC guidance, providers should test all pregnant women who lived in, traveled to or whose partner traveled to Miami-Dade County after Aug. 1, 2016. It is also recommended that all pregnant women who reside in or travel frequently to the area where active transmission is likely occurring be tested for Zika in the first and second trimester. Pregnant women in the identified area can contact their medical provider or their local county health department to be tested and receive a Zika prevention kit. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Additionally, the department is working closely with the Healthy Start Coalition of Miami-Dade County to identify pregnant women in the impacted areas to ensure they have access to resources and information to protect themselves. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Pregnant women can contact their local county health department for Zika risk assessment and testing hours and information. A Zika risk assessment will be conducted by county health department staff and blood and/or urine samples may be collected and sent to labs for testing. It may take one to two weeks to receive results. Florida has been monitoring pregnant women with evidence of Zika regardless of symptoms. The total number of pregnant women who have been or are being monitored is 180. On Feb. 12, Governor Scott directed the State Surgeon General to activate a Zika Virus Information Hotline for current Florida residents and visitors, as well as anyone planning on traveling to Florida in the near future. The hotline, managed by the Department of Health, has assisted 7,930 callers since it launched. The number for the Zika Virus Information Hotline is 1-855-622-6735. The department urges Floridians to drain standing water weekly, no matter how seemingly small. A couple drops of water in a bottle cap can be a breeding location for mosquitoes. Residents and visitors also need to use repellents when enjoying the Florida outdoors. For more information on DOH action and federal guidance, please click here. For resources and information on Zika virus, click here. click image above to enlarge About the Florida Department of Health The department, nationally accredited by the Public Health Accreditation Board, works to protect, promote, and improve the health of all people in Florida through integrated state, county and community efforts. Follow us on Twitter at @HealthyFla and on Facebook. For more information about the Florida Department of Health, please visit www.FloridaHealth.gov.

There are five new locally acquired cases today in Miami-Dade County. All five cases had symptom on-set in September and October and they do not impact the lifting of Zika zones in Little River, North Miami Beach or Wynwood. The department recently concluded the investigation process for these cases to rule out travel and classify the cases as locally acquired. The total number of Zika cases reported in Florida as of today is 1,236. Infection Type Infection Count Travel-Related Infections of Zika 972 Locally Acquired Infections of Zika 249 Undetermined 15 Pregnant Women with Lab-Evidence of Zika 180 http://www.floridahealth.gov/newsroom/2016/12/120716-zika-update.html

December 7, 2016 Department of Health Daily Zika Update Contact: Communications [email protected] (850) 245-4111 Tallahassee, Fla.—In an effort to keep Florida residents and visitors safe and aware about the status of the Zika virus, the department will issue a Zika virus update each week day. Updates will include a Zika case count by county and information to keep Floridians informed and prepared. In order to keep the public informed, the department has posted our investigation process here. There are three new travel-associated cases today with one in Miami-Dade, one in Hillsborough and one in Martin counties. There are five new locally acquired cases today in Miami-Dade County. All five cases had symptom on-set in September and October and they do not impact the lifting of Zika zones in Little River, North Miami Beach or Wynwood. The department recently concluded the investigation process for these cases to rule out travel and classify the cases as locally acquired. The total number of Zika cases reported in Florida as of today is 1,236. Infection Type Infection Count Travel-Related Infections of Zika 972 Locally Acquired Infections of Zika 249 Undetermined 15 Pregnant Women with Lab-Evidence of Zika 180 Note, these categories are not mutually exclusive and cannot be added together. Please visit our website to see the full list of travel-related cases by county. To date, the Zika zones in Wynwood, North Miami Beach and Little River have been lifted after 45 days with no evidence of active transmission and no additional people infected. The Wynwood zone was lifted September 19, the North Miami Beach zone was lifted November 22 and the Little River zone was lifted December 2. The only remaining area of active transmission is approximately 1.5 square miles in South Miami Beach, please see map below. DOH continues outreach and targeted testing in Miami-Dade County and mosquito abatement and reduction activities are also taking place around the locations that are being investigated. One case does not mean ongoing active transmission is taking place. DOH conducts a thorough investigation by sampling close contacts and community members around each case to determine if additional people are infected. If DOH finds evidence that active transmission is occurring in an area, the media and the public will be notified. The timelines below are as of Dec. 2. Note: asymptomatic cases are not reflected as they do not have symptom on-set dates. click image above to enlarge click image above to enlarge click image above to enlarge The department is currently conducting 11 active investigations. The department has closed 41 investigations. Information regarding the investigations can be found here. If investigations reveal additional areas of active transmission, the department will announce a defined area of concern. The department has conducted Zika virus testing for more than 10,839 people statewide. Florida currently has the capacity to test 6,321 people for active Zika virus and 4,786 for Zika antibodies. At Governor Scott’s direction, all county health departments now offer free Zika risk assessment and testing to pregnant women. Florida’s small case cluster is not considered widespread transmission, however, pregnant women are advised to avoid non-essential travel to the impacted area in Miami-Dade County (see map below). If you are pregnant and must travel or if you live or work in the impacted area, protect yourself from mosquito bites by wearing insect repellent, long clothing and limiting your time outdoors. According to CDC guidance, providers should test all pregnant women who lived in, traveled to or whose partner traveled to Miami-Dade County after Aug. 1, 2016. It is also recommended that all pregnant women who reside in or travel frequently to the area where active transmission is likely occurring be tested for Zika in the first and second trimester. Pregnant women in the identified area can contact their medical provider or their local county health department to be tested and receive a Zika prevention kit. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Additionally, the department is working closely with the Healthy Start Coalition of Miami-Dade County to identify pregnant women in the impacted areas to ensure they have access to resources and information to protect themselves. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Pregnant women can contact their local county health department for Zika risk assessment and testing hours and information. A Zika risk assessment will be conducted by county health department staff and blood and/or urine samples may be collected and sent to labs for testing. It may take one to two weeks to receive results. Florida has been monitoring pregnant women with evidence of Zika regardless of symptoms. The total number of pregnant women who have been or are being monitored is 180. On Feb. 12, Governor Scott directed the State Surgeon General to activate a Zika Virus Information Hotline for current Florida residents and visitors, as well as anyone planning on traveling to Florida in the near future. The hotline, managed by the Department of Health, has assisted 7,930 callers since it launched. The number for the Zika Virus Information Hotline is 1-855-622-6735. The department urges Floridians to drain standing water weekly, no matter how seemingly small. A couple drops of water in a bottle cap can be a breeding location for mosquitoes. Residents and visitors also need to use repellents when enjoying the Florida outdoors. For more information on DOH action and federal guidance, please click here. For resources and information on Zika virus, click here. click image above to enlarge About the Florida Department of Health The department, nationally accredited by the Public Health Accreditation Board, works to protect, promote, and improve the health of all people in Florida through integrated state, county and community efforts. Follow us on Twitter at @HealthyFla and on Facebook. For more information about the Florida Department of Health, please visit www.FloridaHealth.gov.

There are three new travel-associated cases today with one in Miami-Dade, one in Hillsborough and one in Martin counties. There are five new locally acquired cases today in Miami-Dade County. All five cases had symptom on-set in September and October and they do not impact the lifting of Zika zones in Little River, North Miami Beach or Wynwood. The department recently concluded the investigation process for these cases to rule out travel and classify the cases as locally acquired. The total number of Zika cases reported in Florida as of today is 1,236. http://www.floridahealth.gov/newsroom/2016/12/120716-zika-update.html

Align Segment-ID Name Score E-Value Identity EPI593887 A/Guangzhou/39715/2014 (A/H5N6) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI659164 A/environment/Yunnan/03.15 DQWGH008-Z/2015(H5N6) (A/H5N6) segment 1 (PB2) 4183.8 0.000000e+00 2275/2280 (99%) EPI659092 A/chicken/Yunnan/03.15 DQJT0054-Z-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2274/2280 (99%) EPI687536 A/Goose/ Guangdong /SSLBY/2015（H5N6） (A/H5N6) segment 1 (PB2) 4106.2 0.000000e+00 2261/2280 (99%) EPI687495 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 1 (PB2) 4106.2 0.000000e+00 2261/2280 (99%) EPI656599 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 1 (PB2) 4106.2 0.000000e+00 2261/2280 (99%) EPI656719 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 1 (PB2) 4100.7 0.000000e+00 2260/2280 (99%) EPI656647 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 1 (PB2) 4100.7 0.000000e+00 2258/2277 (99%) EPI656623 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 1 (PB2) 4100.7 0.000000e+00 2260/2280 (99%) EPI602489 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 1 (PB2) 4100.7 0.000000e+00 2260/2280 (99%) EPI656655 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI530059 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI837503 A/chicken/Heilongjiang/S7/2014 (A/H5N2) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI661660 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI599290 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI550750 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 1 (PB2) 4089.6 0.000000e+00 2259/2281 (99%) EPI775290 A/duck/Guangzhou/018/2014 (A/H5N6) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI602496 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI599344 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI550761 A/duck/Laos/XBY004/2014 (A/H5N6) segment 1 (PB2) 4084.1 0.000000e+00 2258/2281 (98%) EPI530051 A/duck/Jiangxi/95/2014 (A/H5N6) segment 1 (PB2) 4084.1 0.000000e+00 2258/2281 (98%) EPI599332 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI775298 A/duck/Guangzhou/021/2014 (A/H5N6) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%) EPI736911 A/Changsha/1/2014 (A/H5N6) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%) EPI681195 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%) EPI599318 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%) EPI687544 A/Goose/ Guangdong /SSZYP/2015（H5N6） (A/H5N6) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%) EPI681196 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%) EPI602417 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%) EPI599337 A/duck/Dongguan/3069/2013 (A/H5N6) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%) EPI599311 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%) EPI599297 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%) EPI531453 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%) EPI656959 A/duck/Hunan/02.26 YYGK286-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4065.6 0.000000e+00 2253/2279 (98%) EPI839144 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%) EPI691555 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%) EPI839136 A/Copsychus saularis/Guangdong/SW8/2014 (A/H5N6) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI657471 A/environment/Jilin/04.11 CCHSL012/2015(H5N6) (A/H5N6) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI654368 A/Environment/GD-QY_201/H9N2/2014-5 (A/H9N2) segment 1 (PB2) 4056.4 0.000000e+00 2250/2277 (98%) EPI645048 A/swine/Guangdong/2/2014 (A/H5N6) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI599325 A/duck/Dongguan/2685/2013 (A/H5N6) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%) EPI664418 A/chicken/Jilin/04.11 CCHSL007/2015(Mixed) (A/H5N6) segment 1 (PB2) 4054.5 0.000000e+00 2251/2279 (98%) EPI657495 A/environment/Jilin/04.25 NA004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4054.5 0.000000e+00 2251/2279 (98%) EPI681204 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%) EPI645041 A/swine/Guangdong/1/2014 (A/H5N6) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%) EPI599646 A/goose/Shantou/1763/2014 (A/H5N6) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%) EPI691548 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI681197 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI602475 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%) EPI599653 A/goose/Shantou/1791/2014 (A/H5N6) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI599283 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%) EPI646029 A/chicken/Jiangsu/WXSB2/2014 (A/H5N6) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI602482 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599660 A/goose/Shantou/1806/2014 (A/H5N6) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI590854 A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 1 (PB2) 4039.7 0.000000e+00 2250/2281 (98%) EPI657367 A/duck/Hunan/12.17 YYGK056/2014(H5N6) (A/H5N6) segment 1 (PB2) 4032.4 0.000000e+00 2247/2279 (98%) EPI657327 A/duck/Hunan/12.17 YYGK040/2014(H5N6) (A/H5N6) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI657719 A/duck/Hunan/12.17 YYFQH0018-Z-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4026.8 0.000000e+00 2247/2280 (98%) EPI657375 A/duck/Hunan/12.17 YYGK0057/2014(H5N6) (A/H5N6) segment 1 (PB2) 4026.8 0.000000e+00 2246/2279 (98%) EPI768628 A/chicken/Wuxi/SC7393/2015(H5N6) (A/H5N6) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI760114 A/tiger/Yunnan/tig1404/2014 (A/H5N1) segment 1 (PB2) 4023.1 0.000000e+00 2247/2281 (98%) EPI703532 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 1 (PB2) 4023.1 0.000000e+00 2240/2271 (98%) EPI645988 A/chicken/Jiangsu/WXS7393/2014 (A/H5N6) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI590855 A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 1 (PB2) 4023.1 0.000000e+00 2247/2281 (98%) EPI590853 A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 1 (PB2) 4023.1 0.000000e+00 2247/2281 (98%) EPI660428 A/goose/Guangdong/04.22 DGCPLB045-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4021.3 0.000000e+00 2245/2279 (98%) EPI658820 A/duck/Hunan/03.09 YYFQH0047-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4021.3 0.000000e+00 2245/2279 (98%) EPI657479 A/duck/Hunan/12.17 YYGK082/2014(H5N6) (A/H5N6) segment 1 (PB2) 4021.3 0.000000e+00 2245/2279 (98%) EPI681206 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI590811 A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI559040 A/chicken/Vietnam/NCVD-KA423/2013 (A/H5N1) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI661532 A/duck/Jiangxi/02.06 NCJD039-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI660780 A/duck/Guangdong/04.22 DGCPLB041-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI660492 A/goose/Guangdong/04.22 DGCP118-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI660300 A/goose/Guangdong/04.22 DGCP120-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI660188 A/duck/Guangdong/04.22 DGCPLB018-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI660972 A/duck/Jiangxi/02.05 YGYXG015-P/2015(H6N6) (A/H5N6) segment 1 (PB2) 4013.9 0.000000e+00 2243/2278 (98%) EPI424669 A/duck/Vietnam/NCVD-1940/2012 (A/H5N1) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI660788 A/duck/Guangdong/04.22 DGCPLB044-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI703537 A/duck/Eastern China/S0908/2014 (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2236/2271 (98%) EPI681205 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2243/2281 (98%) EPI661556 A/chicken/Jiangxi/02.05 YGYXG023-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI661540 A/duck/Jiangxi/02.06 NCJD036-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI661076 A/environment/Jiangxi/01.14 NCJD027/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI661044 A/duck/Jiangxi/01.14 NCJD054-P/2015(H5N6) (A/H5N6) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI760202 A/duck/Hunan/146/2014 (A/H3N6) segment 1 (PB2) 3997.3 0.000000e+00 2241/2280 (98%) EPI687308 A/chicken/Yunnan/1/2014 (A/H5N1) segment 1 (PB2) 3997.3 0.000000e+00 2238/2275 (98%) EPI760135 A/tiger/Yunnan/tig1412/2014 (A/H5N1) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI683188 A/duck/Wuhan/JXYFB22/2015 (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2242/2281 (98%) EPI683187 A/chicken/Wuhan/WHYJ02/2015 (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI683186 A/chicken/Wuhan/WHYJ01/2015 (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI683183 A/turtledove/Wuhan/HKBJ43/2015 (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI683182 A/turtledove/Wuhan/HKBJ27/2015 (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI683181 A/turtledove/Wuhan/WHBJ26/2014 (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI664218 A/duck/Jiangxi/01.14 NCJD034-P/2015(Mixed) (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI661068 A/duck/Jiangxi/01.14 NCJD064-P/2015(Mixed) (A/H5N6) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI683185 A/duck/Wuhan/WHYF03/2015 (A/H5N6) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI683184 A/duck/Wuhan/WHYF02/2015 (A/H5N6) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI683180 A/turtledove/Wuhan/WHBJ28/2014 (A/H5N6) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI683179 A/turtledove/Wuhan/WHBJ12/2014 (A/H5N6) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%)

Align Segment-ID Name Score E-Value Identity EPI687542 A/Goose/ Guangdong /SSLBY/2015（H5N6） (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664576 A/chicken/Yunnan/03.16 DQXYL061-1-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664504 A/environment/Jiangxi/05.07 NCJD0009D/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664472 A/environment/JiangXi/05.06 NCJD0100C/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664448 A/chicken/Hunan/04.14 YYXS0812-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI661658 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658762 A/duck/Yunnan/03.16 DQXYL022-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658754 A/duck/Yunnan/03.16 DQXYL017-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658698 A/chicken/Yunnan/03.16 DQJT0066-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657677 A/environment/Yunnan/03.15 DQWGH020/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657669 A/environment/Yunnan/03.15 DQWGH009/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657533 A/duck/Yunnan/03.15 DQWGH005-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657525 A/duck/Yunnan/03.16 DQXYL0039-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657517 A/chicken/Yunnan/03.16 DQJT0048-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI656645 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI656597 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI602494 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI602415 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI599295 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI593892 A/Guangzhou/39715/2014 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI550766 A/duck/Laos/XBY004/2014 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI550755 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI530057 A/duck/Jiangxi/95/2014 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI775292 A/duck/Guangzhou/021/2014 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI775284 A/duck/Guangzhou/018/2014 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI687501 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI659090 A/chicken/Yunnan/03.15 DQJT0054-Z-P/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI656653 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI656637 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI656629 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI656621 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI602487 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI602480 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI599323 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI599316 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI599288 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI768623 A/chicken/Wuxi/SC7393/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI760101 A/feline/Guangdong/2/2015 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI760087 A/feline/Guangdong/1/2015 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI703660 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI682963 A/turtledove/Wuhan/WHBJ26/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI662090 A/environment/Guangdong/04.16 SZLGWLShui5/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI662058 A/environment/Guangdong/04.16 SZLGWL006/2015(Mixed) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI661802 A/environment/Guangdong/02.11 DGCPSJ050/2015(Mixed) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI661794 A/environment/Guangdong/02.11 DGQTSJ046E/2015(Mixed) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI661610 A/duck/Guangdong/03.26 DGCP075-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660786 A/duck/Guangdong/04.22 DGCPLB044-P/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660778 A/duck/Guangdong/04.22 DGCPLB041-P/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660698 A/goose/Guangdong/04.23 DGQTXC236-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660666 A/duck/Guangdong/04.23 DGQTXC236-P/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660490 A/goose/Guangdong/04.22 DGCP118-P/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660450 A/goose/Guangdong/04.22 DGCP116-P/2015(Mixed) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660426 A/goose/Guangdong/04.22 DGCPLB045-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660298 A/goose/Guangdong/04.22 DGCP120-P/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660186 A/duck/Guangdong/04.22 DGCPLB018-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI660002 A/goose/Guangdong/04.22 DGCP117-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI646026 A/chicken/Jiangsu/WXSB2/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI645984 A/chicken/Jiangsu/WXS7393/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI645043 A/swine/Guangdong/2/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI602422 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI599349 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI599342 A/duck/Dongguan/3069/2013 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596548 A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596541 A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596537 A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596533 A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596529 A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596525 A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596518 A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596517 A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI596513 A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI593899 A/duck/Guangzhou/41227/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI590816 A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI580425 A/feline/Guangdong/2/2014(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI580412 A/feline/Guangdong/1/2014(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI531459 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI760058 A/duck/Guangdong/01.01 SZSGXJK007-G/2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI760053 A/duck/Guangdong/01.01 SZSGXJK006-G/2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI760045 A/duck/Guangdong/01.01 SZSGXJK006-Y/2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI760037 A/duck/Guangdong/01.01 SZSGXJK005-G /2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI760010 A/duck/Guangdong/01.01 SZSGXJK004-Y/2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI760005 A/duck/Guangdong/01.01 SZSGXJK003-G/2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI759994 A/duck/Guangdong/01.01 SZSGXJK002-G/2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI759986 A/duck/Guangdong/01.01 SZSGXJK002-Y/2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI759972 A/duck/Guangdong/01.01 SZSGXJK001-Y /2016 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI736917 A/Changsha/1/2014 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI703666 A/duck/Eastern China/S0322/2014 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI691549 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI684560 A/Environment/Shenzhen/3/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682972 A/duck/Wuhan/WHYF03/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682971 A/chicken/Wuhan/WHYJ02/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682970 A/duck/Wuhan/WHYF02/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682969 A/chicken/Wuhan/WHYJ01/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682968 A/turtledove/Wuhan/HKBJ43/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682967 A/turtledove/Wuhan/HKBJ27/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682966 A/turtledove/Wuhan/WHBJ28/2014 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682965 A/turtledove/Wuhan/WHBJ12/2014 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682964 A/turtledove/Wuhan/HKBJ07/2015 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI681375 A/goose/Zhejiang/925036/2014 (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI664552 A/duck/Hunan/03.09 YYFQH0046-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%)

Align Segment-ID Name Score E-Value Identity EPI593891 A/Guangzhou/39715/2014 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI659094 A/chicken/Yunnan/03.15 DQJT0054-Z-P/2015(H5N6) (A/H5N6) segment 6 (NA) 2497.8 0.000000e+00 1370/1379 (99%) EPI659166 A/environment/Yunnan/03.15 DQWGH008-Z/2015(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1368/1377 (99%) EPI839172 A/Syrrhaptes paradoxus/Guangdong/ZH283/2015 (A/H5N6) segment 6 (NA) 2483.0 0.000000e+00 1368/1380 (99%) EPI656649 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI656625 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI687541 A/Goose/ Guangdong /SSLBY/2015（H5N6） (A/H5N6) segment 6 (NA) 2466.4 0.000000e+00 1365/1380 (98%) EPI660286 A/duck/Guangdong/04.22 DGCP061-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2466.4 0.000000e+00 1365/1380 (98%) EPI660422 A/duck/Guangdong/04.22 DGCP062-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2460.9 0.000000e+00 1364/1380 (98%) EPI602493 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 6 (NA) 2460.9 0.000000e+00 1364/1380 (98%) EPI775293 A/duck/Guangzhou/021/2014 (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI775285 A/duck/Guangzhou/018/2014 (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI656641 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI602414 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI599329 A/duck/Dongguan/2685/2013 (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI599301 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI599294 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI530056 A/duck/Jiangxi/95/2014 (A/H5N6) segment 6 (NA) 2455.3 0.000000e+00 1363/1380 (98%) EPI839149 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI687500 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI656721 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI599341 A/duck/Dongguan/3069/2013 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI599335 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI599322 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596624 A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596618 A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596612 A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596606 A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596600 A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596594 A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596588 A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI596576 A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1362/1380 (98%) EPI550765 A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1363/1381 (98%) EPI550754 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 6 (NA) 2449.8 0.000000e+00 1363/1381 (98%) EPI656601 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2447.9 0.000000e+00 1361/1379 (98%) EPI596582 A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 6 (NA) 2446.1 0.000000e+00 1361/1380 (98%) EPI656657 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2444.2 0.000000e+00 1361/1380 (98%) EPI602479 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 6 (NA) 2444.2 0.000000e+00 1361/1380 (98%) EPI601944 A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA) 2444.2 0.000000e+00 1361/1380 (98%) EPI599315 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 6 (NA) 2444.2 0.000000e+00 1361/1380 (98%) EPI599287 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 6 (NA) 2444.2 0.000000e+00 1361/1380 (98%) EPI531458 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 6 (NA) 2444.2 0.000000e+00 1361/1380 (98%) EPI661662 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI659030 A/duck/Hunan/02.07 YYFQH006-P/2015(H5N6) (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI659006 A/duck/Hunan/01.21 YYFQH003-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI658958 A/duck/Hunan/01.21 YYFQH027-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI658838 A/duck/Hunan/01.21 YYFQH015-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI658774 A/duck/Hunan/02.07 YYFQH010-P/2015(H5N6) (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI656633 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602421 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1361/1381 (98%) EPI602319 A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602312 A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602305 A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602298 A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602274 A/chicken/Jiangxi/13238/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602267 A/chicken/Jiangxi/13235/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602260 A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602253 A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602236 A/chicken/Jiangxi/13264/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602229 A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602222 A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602208 A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602201 A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602155 A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602048 A/chicken/Dongguan/2818/2013 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI602032 A/chicken/Dongguan/4190/2013 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1361/1381 (98%) EPI602019 A/chicken/Shenzhen/2072/2013 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601464 A/chicken/Jiangxi/13211/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601453 A/chicken/Jiangxi/13198/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601443 A/chicken/Jiangxi/13196/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601406 A/chicken/Jiangxi/13253/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601394 A/chicken/Jiangxi/13237/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601342 A/chicken/Jiangxi/13272/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601197 A/chicken/Jiangxi/13216/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601190 A/chicken/Jiangxi/13215/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601180 A/chicken/Jiangxi/13212/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601171 A/chicken/Jiangxi/13206/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601162 A/chicken/Jiangxi/13204/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601152 A/chicken/Jiangxi/13246/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601126 A/chicken/Jiangxi/13228/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601117 A/chicken/Jiangxi/13219/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601099 A/chicken/Jiangxi/13271/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601080 A/chicken/Jiangxi/13260/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI601070 A/chicken/Jiangxi/13259/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI600276 A/chicken/Jiangxi/13275/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI600269 A/chicken/Jiangxi/13263/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI600255 A/chicken/Jiangxi/13248/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI600241 A/chicken/Jiangxi/13222/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI600234 A/chicken/Jiangxi/13218/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI600220 A/chicken/Jiangxi/13208/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI600199 A/chicken/Jiangxi/12782/2014 (A/H10N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI599657 A/goose/Shantou/1791/2014 (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI599348 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI593183 A/chicken/Jiangxi/14535/2014 (A/H7N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI593140 A/chicken/Jiangxi/14510/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI593123 A/chicken/Jiangxi/14501/2014 (A/H7N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI530065 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 6 (NA) 2438.7 0.000000e+00 1360/1380 (98%) EPI661902 A/chicken/Guangxi/04.10 NM140/2015(H5N6) (A/H5N6) segment 6 (NA) 2436.9 0.000000e+00 1359/1379 (98%) EPI659022 A/duck/Hunan/01.21 YYFQH005-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2436.9 0.000000e+00 1359/1379 (98%) EPI658998 A/duck/Hunan/02.07 YYFQH003-P/2015(H5N6) (A/H5N6) segment 6 (NA) 2436.9 0.000000e+00 1359/1379 (98%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI593889 A/Guangzhou/39715/2014 (A/H5N6) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI656626 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI659095 A/chicken/Yunnan/03.15 DQJT0054-Z-P/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI656602 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI599292 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI659167 A/environment/Yunnan/03.15 DQWGH008-Z/2015(H5N6) (A/H5N6) segment 4 (HA) 3099.8 0.000000e+00 1692/1699 (99%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI656650 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1696/1705 (99%) EPI599320 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI599313 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI656658 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI656642 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI656634 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI602491 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI601941 A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI599346 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1695/1705 (99%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI839147 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI661663 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI656722 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1694/1705 (99%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1694/1705 (99%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 3085.0 0.000000e+00 1692/1703 (99%) EPI760089 A/feline/Guangdong/1/2015 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI691378 A/ Guangdong /ZQ874/2015（H5N6） (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI661839 A/duck/Guangdong/02.11 DGCP093-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI661807 A/environment/Guangdong/02.11 DGCPSJ050/2015(Mixed) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI661799 A/environment/Guangdong/02.11 DGQTSJ046E/2015(Mixed) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI661735 A/duck/Guangdong/02.11 DGCP104-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI661719 A/duck/Guangdong/02.11 DGCP102-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI657498 A/environment/Jilin/04.25 NA004/2015(H5N6) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI602103 A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI580408 A/feline/Guangdong/1/2014(H5N6) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI645042 A/swine/Guangdong/2/2014 (A/H5N6) segment 4 (HA) 3079.5 0.000000e+00 1691/1703 (99%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI668839 A/environment/Yunnan/07.11 DQXY011/2015(H5N6) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI661847 A/duck/Guangdong/02.11 DGCP094-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI661831 A/duck/Guangdong/02.11 DGCP092-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI661727 A/duck/Guangdong/02.11 DGCP103-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI660767 A/duck/Guangdong/04.23 DGQTSJ130-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI660695 A/duck/Guangdong/04.23 DGQTSJ131-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI596610 A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI775291 A/duck/Guangzhou/021/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI775283 A/duck/Guangzhou/018/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI760097 A/feline/Guangdong/2/2015 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI687547 A/Goose/ Guangdong /SSZYP/2015（H5N6） (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI687144 A/peregrine_falcon/Hong_Kong/04955/2015 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI661911 A/environment/Guangdong/04.15 SZBAXQshui2/2015(H5N6) (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI596598 A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI596592 A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI596586 A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI596580 A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI596574 A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI593896 A/duck/Guangzhou/41227/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI590813 A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI580422 A/feline/Guangdong/2/2014(H5N6) (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI550768 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI550763 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI550759 A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI550757 A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI659023 A/duck/Hunan/01.21 YYFQH005-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3068.4 0.000000e+00 1689/1703 (99%) EPI659007 A/duck/Hunan/01.21 YYFQH003-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3068.4 0.000000e+00 1689/1703 (99%) EPI658831 A/duck/Hunan/02.07 YYFQH015-P/2015(H5N6) (A/H5N6) segment 4 (HA) 3068.4 0.000000e+00 1689/1703 (99%) EPI658815 A/duck/Hunan/01.21 YYFQH012-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3068.4 0.000000e+00 1689/1703 (99%) EPI658791 A/duck/Hunan/01.21 YYFQH011-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3068.4 0.000000e+00 1689/1703 (99%) EPI658783 A/duck/Hunan/01.21 YYFQH010-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3068.4 0.000000e+00 1689/1703 (99%) EPI768621 A/chicken/Wuxi/SC7393/2015(H5N6) (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI664461 A/duck/Hunan/12.17 YYFQH0072-O/2014(Mixed) (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI664437 A/duck/Hunan/12.17 YYFQH0046-1-O/2014(Mixed) (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI659087 A/environment/Yunnan/03.16 DQXYL0053-Z-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI657738 A/duck/Hunan/12.17 YYGK0063-O/2014(H5N6) (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI657354 A/duck/Hunan/12.17 YYFQH052-P/2014(H5N6) (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI656538 A/duck/Hunan/12.17 YYFQH012-O/2014(H5N6) (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI645982 A/chicken/Jiangsu/WXS7393/2014 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI596622 A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI596616 A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI596604 A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI590806 A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI586256 A/Little egret/Vietnam/WBT210/2014 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%)

Isolate name: A/Guangzhou/39715/2014 Isolate ID: EPI_ISL_175335 Passage details/history: passage details: E1 Type: A / H5N6 Lineage: Sample information Collection date: 2014-12-11 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: China Additional location information: Patient age: Gender: Outbreak: Treatment: Specimen source: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Other Database Import Sample ID given by the submitting laboratory: Authors: Li,K.; Liu,H.; Di,B.; Li,T. Address: Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: passage details: E1 Sequence segment identifier length accession # INSDC Sequence PB2 A/Guangzhou/39715/2014 2280 EPI593887 KP765785 PA A/Guangzhou/39715/2014 2151 EPI576169 KP765787 HA A/Guangzhou/39715/2014 1704 EPI593889 KP765788 NP A/Guangzhou/39715/2014 1497 EPI593890 KP765789 NA A/Guangzhou/39715/2014 1380 EPI593891 KP765790 Submitter information Submitter: , EpiFluDB Submission Date: 2015-02-11 Last modifier: Pohlmann, Anne (EpiFlu Data Curator) Last modified: 2015-03-14

A/Changsha/1/2014 EPI_ISL_217025 H5N6 2280 2277 2151 1701 1497 1380 982 823 --- --- 2014-02-23 A/Sichuan/26221/2014 EPI_ISL_163493 H5N6 E1 2280 2274 2151 1704 1497 1413 982 823 --- --- 2014-04-21 A/Guangzhou/39715/2014 EPI_ISL_175335 H5N6 passage details: E1 2280 --- 2151 1704 1497 1380 --- --- --- --- 2014-12-11 A/Guangzhou/39715/2014 EPI_ISL_180669 H5N6 --- 2274 --- --- --- --- 982 823 --- --- 2014-12-11

There are now three sets of human H5N6 sequences from 2014.

Descriptions Align Segment-ID Name Score E-Value Identity EPI668889 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668880 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668848 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668840 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668811 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668803 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668794 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668737 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI659153 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658737 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658705 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658689 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658681 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657796 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657652 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657644 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657508 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587623 A/Yunnan/14564/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587615 A/Yunnan/14563/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587552 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668864 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI668856 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI658025 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657828 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657660 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657636 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657628 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587544 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587528 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587536 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 8 (NS) 1541.2 0.000000e+00 836/838 (99%) EPI664599 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI664559 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI664535 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI658001 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657700 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657692 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657684 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI659097 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI641402 A/Yunnan/0127/2015 (A/H5N6) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI668872 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI656772 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 828/829 (99%) EPI587568 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI658865 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1513.5 0.000000e+00 823/825 (99%) EPI838166 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI497500 A/environment/Chongqing/00516/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI692043 A/pigeon/Hubei/269/2012 (A/H9N2) segment 8 (NS) 1489.5 0.000000e+00 827/838 (98%) EPI838176 A/chicken/Guangxi/SIC15/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI656868 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 8 (NS) 1484.0 0.000000e+00 807/809 (99%) EPI838188 A/chicken/Guangdong/SIC27/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI838185 A/chicken/Guangdong/SIC18/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI838182 A/chicken/Guangxi/SIC19/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI736589 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI692041 A/pigeon/Hubei/228/2012 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI690482 A/Zhongshan/201501/2015 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI683109 A/chicken/Wuhan/JXQL01/2015 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI664567 A/environment/Yunnan/03.17 DQJT0015-Z/2015(Mixed) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI658457 A/environment/Jiangxi/05.07 NCJD0095C/2015(H5N6) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI658225 A/chicken/Jiangxi/05.06 NCDZT0043B-P/2015(H5N6) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI654120 A/Chicken/GD-ZS_720/H7N9/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 824/835 (98%) EPI628714 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI628418 A/Guangdong/037/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627994 A/Guangdong/0065/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627970 A/Guangdong/0081/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627946 A/Guangdong/0069/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627938 A/Guangdong/0066/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627771 A/Guangdong-Guangzhou/XN05586/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627723 A/Guangdong/0024/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627667 A/Guangdong-Guangzhou/XN02778/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627651 A/Guangdong-Guangzhou/XN00588/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602474 A/chicken/Jiangxi/5195/2014 (A/H10N8) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602142 A/chicken/Jiangxi/18955/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602124 A/chicken/Jiangxi/18474/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602090 A/chicken/Jiangxi/20471/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601956 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601928 A/chicken/Jiangxi/23786/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601919 A/chicken/Jiangxi/23241/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601891 A/chicken/Jiangxi/1271/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601880 A/chicken/Jiangxi/36242/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601813 A/chicken/Jiangxi/36266/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601580 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601552 A/chicken/Jiangxi/36240/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601526 A/chicken/Jiangxi/20420/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601506 A/chicken/Jiangxi/36278/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601310 A/chicken/Jiangxi/1247/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601235 A/duck/Jiangxi/36477/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600086 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600079 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600072 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599820 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599760 A/chicken/Jiangxi/31872/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 827/839 (98%) EPI599746 A/chicken/Jiangxi/30772/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599739 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599583 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599562 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599555 A/chicken/Jiangxi/25970/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599548 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599527 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599520 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599513 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599506 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI668882 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI587622 A/Yunnan/14564/2015 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI587614 A/Yunnan/14563/2015 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI668888 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668866 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668805 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668796 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI658736 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657827 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657683 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657651 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657643 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657635 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657507 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI587543 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI664598 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI658000 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI657795 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI657699 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI657691 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI664558 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 5 (NP) 2756.3 0.000000e+00 1494/1495 (99%) EPI658024 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 5 (NP) 2756.3 0.000000e+00 1494/1495 (99%) EPI587535 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 5 (NP) 2756.3 0.000000e+00 1495/1497 (99%) EPI668874 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668858 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668850 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668812 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668736 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI657659 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI656867 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1493/1494 (99%) EPI587567 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI587551 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI587527 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI659152 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%) EPI659096 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%) EPI658704 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%) EPI656771 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 5 (NP) 2750.8 0.000000e+00 1491/1492 (99%) EPI658680 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2748.9 0.000000e+00 1494/1497 (99%) EPI657627 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 5 (NP) 2748.9 0.000000e+00 1494/1497 (99%) EPI658688 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2747.1 0.000000e+00 1493/1496 (99%) EPI691544 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 5 (NP) 2739.7 0.000000e+00 1491/1495 (99%) EPI691538 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 5 (NP) 2739.7 0.000000e+00 1491/1495 (99%) EPI658864 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2732.3 0.000000e+00 1485/1488 (99%) EPI641401 A/Yunnan/0127/2015 (A/H5N6) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI680855 A/chicken/Zhejiang/C71916/2013 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI680839 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI681127 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680862 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680858 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680853 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI509116 A/Fujian/05/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI683071 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI681129 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680854 A/chicken/Zhejiang/C71914/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680852 A/chicken/Zhejiang/C7195/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680851 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680850 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680848 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638105 A/Anhui/1-YK_RG202/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638098 A/Anhui/1-YK_RG201/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638091 A/Anhui/1-YK_RG200/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638084 A/Anhui/1-YK_RG199/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638077 A/Anhui/1-YK_RG198/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638070 A/Anhui/1-YK_RG197/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638063 A/Anhui/1-YK_RG196/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638056 A/Anhui/1-YK_RG195/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638049 A/Anhui/1-YK_RG194/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638042 A/Anhui/1-YK_RG193/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638035 A/Anhui/1-YK_RG192/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638028 A/Anhui/1-YK_RG191/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638021 A/Anhui/1-YK_RG190/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638014 A/Anhui/1-YK_RG189/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638007 A/Anhui/1-YK_RG188/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638000 A/Anhui/1-YK_RG187/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637993 A/Anhui/1-YK_RG186/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637986 A/Anhui/1-YK_RG185/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637979 A/Anhui/1-YK_RG184/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637972 A/Anhui/1-YK_RG183/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637965 A/Anhui/1-YK_RG182/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637958 A/Anhui/1-YK_RG181/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637951 A/Anhui/1-YK_RG180/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637944 A/Anhui/1-YK_RG179/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637937 A/Anhui/1-YK_RG178/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637930 A/Anhui/1-YK_RG177/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637923 A/Anhui/1-YK_RG176/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637916 A/Anhui/1-YK_RG174/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637909 A/Anhui/1-YK_RG173/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637902 A/Anhui/1-YK_RG172/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637895 A/Anhui/1-YK_RG171/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637888 A/Anhui/1-YK_RG170/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637881 A/Anhui/1-YK_RG169/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637874 A/Anhui/1-YK_RG168/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637867 A/Anhui/1-YK_RG167/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637860 A/Anhui/1-YK_RG166/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637832 A/Anhui/1-YK_RG162/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637825 A/Anhui/1-YK_RG161/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637818 A/Anhui/1-YK_RG160/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637811 A/Anhui/1-YK_RG159/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637804 A/Anhui/1-YK_RG158/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637797 A/Anhui/1-YK_RG157/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)

Align Segment-ID Name Score E-Value Identity EPI587617 A/Yunnan/14563/2015 (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI668883 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI587625 A/Yunnan/14564/2015 (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI668854 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI668740 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI659155 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI658707 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI587554 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI587538 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 3 (PA) 3958.5 0.000000e+00 2148/2151 (99%) EPI668876 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI668868 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI668859 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI659099 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI587570 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI587530 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI658739 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI657798 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI657638 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI657630 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI657510 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI587546 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI657654 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 3 (PA) 3949.3 0.000000e+00 2146/2150 (99%) EPI657646 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 3 (PA) 3949.3 0.000000e+00 2144/2147 (99%) EPI658683 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI658027 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI657830 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI657662 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI658691 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI658003 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI657702 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI657694 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI657686 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI664601 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI656774 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 3 (PA) 3934.5 0.000000e+00 2145/2152 (99%) EPI664537 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3930.8 0.000000e+00 2138/2143 (99%) EPI627117 A/Guangdong/15SF030/2015 (A/H7N9) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI641342 A/Yunnan/0127/2015 (A/H5N6) segment 3 (PA) 3916.0 0.000000e+00 2140/2151 (99%) EPI628684 A/Guangdong/15SF054/2015 (A/H7N9) segment 3 (PA) 3914.2 0.000000e+00 2140/2151 (99%) EPI668793 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI628620 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627469 A/Fujian/1/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627309 A/Fujian/8/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI566127 A/Fujian/09273/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI541773 A/Taiwan/3/2013 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI769574 A/Fujian/16/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI668893 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI668843 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI668810 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI668802 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI628628 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627493 A/Fujian/20/2014 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627461 A/Fujian/2/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627381 A/Guangdong/02497/2014 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627293 A/Fujian/19/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627229 A/Fujian/23/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627213 A/Fujian/25/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627101 A/Fujian/17/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627045 A/Guangdong/15SF081/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI769566 A/Fujian/10/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI656374 A/GD-54/2015/H7N9/2015-01-27 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2136/2148 (99%) EPI627221 A/Fujian/24/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI627133 A/Zhejiang/1/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI626997 A/Guangdong/15SF080/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI621113 A/Quzhou/1/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI566080 A/Guizhou/03240/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI628692 A/Guangdong/15SF055/2015 (A/H7N9) segment 3 (PA) 3897.6 0.000000e+00 2137/2151 (99%) EPI692637 A/chicken/Henan/F246/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI692635 A/chicken/Henan/117/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI692633 A/chicken/Henan/114/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI680771 A/chicken/Zhejiang/3C19/2013 (A/H9N2) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI680758 A/chicken/Zhejiang/C38/2013 (A/H9N2) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI680733 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI663521 A/duck/Sunan/040802/2013 (A/H0) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI628636 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI628180 A/Hunan/09193/2014 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI627253 A/Fujian/7/2015 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI627157 A/Zhejiang/3/2015 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI621114 A/Quzhou/2/2015 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI596649 A/Shanghai/02/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI576875 A/chicken/Jiangxi/12544/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI576873 A/chicken/Jiangxi/12492/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI576562 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI545207 A/duck/Sunan/040802G/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI542255 A/Shanghai/MH01/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI532269 A/chicken/Zhejiang/C483/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI532268 A/chicken/Zhejiang/C481/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI509114 A/Fujian/05/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI509065 A/Hunan/0070/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI497934 A/Nanjing/6/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI497890 A/Wuxi/4/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI497844 A/environment/Suzhou/8/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI490975 A/Environment/Guangdong/C13281030/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI468345 A/environment/Hangzhou/109-2/2013(H5N1) (A/H5N1) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI457873 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI457721 A/environment/Fujian/SC337/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI457713 A/environment/Henan/SC232/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI457689 A/environment/Shandong/SD039/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI457681 A/environment/Shandong/SD049/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI457633 A/pigeon/Shanghai/S1421/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI457617 A/wild pigeon/Jiangsu/SD001/2013 (A/H7N9) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%)

Align Segment-ID Name Score E-Value Identity EPI668884 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI587627 A/Yunnan/14564/2015 (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI587619 A/Yunnan/14563/2015 (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI668875 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI668741 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI668860 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI668852 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587572 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587548 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587532 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587540 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 2 (PB1) 4176.4 0.000000e+00 2269/2274 (99%) EPI668869 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4174.5 0.000000e+00 2269/2274 (99%) EPI664603 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI658029 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI658005 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657696 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657664 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657640 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI587556 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI664563 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 2 (PB1) 4170.9 0.000000e+00 2268/2273 (99%) EPI657704 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 2 (PB1) 4169.0 0.000000e+00 2267/2272 (99%) EPI656776 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 2 (PB1) 4169.0 0.000000e+00 2267/2272 (99%) EPI658741 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI658693 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI657800 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI657512 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI658685 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4165.3 0.000000e+00 2267/2273 (99%) EPI657648 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 2 (PB1) 4163.5 0.000000e+00 2266/2272 (99%) EPI659157 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI657832 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2263/2268 (99%) EPI657688 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2263/2268 (99%) EPI668892 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI668842 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI668809 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI668801 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI658869 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4154.2 0.000000e+00 2265/2273 (99%) EPI658709 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 2 (PB1) 4154.2 0.000000e+00 2265/2273 (99%) EPI664539 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI657656 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2259/2265 (99%) EPI656872 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2257/2262 (99%) EPI668792 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI659101 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2257/2265 (99%) EPI641403 A/Yunnan/0127/2015 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI683148 A/chicken/Wenzhou/YHQL04/2014 (A/H9N2) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI846037 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI838018 A/chicken/Zhejiang/SIC30/2014 (A/H9N2) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI683160 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI838012 A/chicken/Zhejiang/SIC32/2014 (A/H9N2) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI628718 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI628630 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI627383 A/Guangdong/02497/2014 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI627119 A/Guangdong/15SF030/2015 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI583739 A/chicken/Yantai/2468/2013 (A/H9N2) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI656352 A/GD-30/2015/H7N9/2015-01-22 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2248/2271 (98%) EPI627471 A/Fujian/1/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627231 A/Fujian/23/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627047 A/Guangdong/15SF081/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627023 A/Guangdong/15SF027/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI583783 A/chicken/Yantai/2469/2013 (A/H9N2) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627455 A/Fujian/3/2015 (A/H7N9) segment 2 (PB1) 4065.6 0.000000e+00 2249/2274 (98%) EPI628694 A/Guangdong/15SF055/2015 (A/H7N9) segment 2 (PB1) 4063.7 0.000000e+00 2249/2274 (98%) EPI656456 A/GD-81/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2247/2271 (98%) EPI656336 A/GD-27/2015/H7N9/2015-01-21 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2247/2271 (98%) EPI628622 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627239 A/Fujian/21/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627199 A/Guangdong/15SF017/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627191 A/Guangdong/15SF020/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI626983 A/Jiangsu/22184/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI594396 A/chicken/Yantai/2529/2013 (A/H0) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627215 A/Fujian/25/2015 (A/H7N9) segment 2 (PB1) 4058.2 0.000000e+00 2248/2274 (98%) EPI656472 A/GD-92/2015/H7N9/2015-02-26 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2244/2268 (98%) EPI656432 A/GD-72/2015/H7N9/2015-02-07 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2246/2271 (98%) EPI656312 A/GD-20/2015/H7N9/2015-01-15 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2246/2271 (98%) EPI656304 A/GD-17/2015/H7N9/2015-01-11 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2246/2271 (98%) EPI628766 A/Zhejiang/8/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI628702 A/Environment/Hunan/07626/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI628638 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI626999 A/Guangdong/15SF080/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI599780 A/chicken/Jiangxi/34682/2013 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI594380 A/chicken/Yantai/2303/2013 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI594373 A/chicken/Yantai/2243/2013 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI838004 A/chicken/Shandong/SIC21/2014 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI683158 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI683150 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI656464 A/GD-76/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2243/2268 (98%) EPI628790 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628782 A/Shandong-Taian/01/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628734 A/Anhui/33223/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628726 A/Anhui/33228/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628686 A/Guangdong/15SF054/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2246/2274 (98%) EPI628678 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628670 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628662 A/Anhui/33227/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628606 A/Environment/Anhui/39280/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI576593 A/chicken/Guangdong/SD1/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI576592 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI576591 A/chicken/Guangdong/G2/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI568751 A/goose/Jiangsu/1027/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI545787 A/chicken/Suzhou/040201H/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI542310 A/Shanghai/MH01/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI587618 A/Yunnan/14563/2015 (A/H5N6) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI668885 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI587626 A/Yunnan/14564/2015 (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI668867 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI668851 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI668739 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI587555 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI587547 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI641404 A/Yunnan/0127/2015 (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI587539 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI668877 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%) EPI668861 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%) EPI587571 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%) EPI587531 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%) EPI657799 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4193.0 0.000000e+00 2276/2279 (99%) EPI657511 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4193.0 0.000000e+00 2276/2279 (99%) EPI658740 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4191.2 0.000000e+00 2275/2278 (99%) EPI659156 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4189.3 0.000000e+00 2276/2280 (99%) EPI658708 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 1 (PB2) 4187.5 0.000000e+00 2275/2279 (99%) EPI657655 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 1 (PB2) 4180.1 0.000000e+00 2273/2278 (99%) EPI664538 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2272/2277 (99%) EPI664602 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI664562 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI658028 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI657703 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI657695 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI657687 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI657663 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI657639 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2273/2279 (99%) EPI658004 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4174.5 0.000000e+00 2272/2278 (99%) EPI657647 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 1 (PB2) 4174.5 0.000000e+00 2272/2278 (99%) EPI668891 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI668795 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI658692 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI658684 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4170.9 0.000000e+00 2272/2279 (99%) EPI668800 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI659100 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4165.3 0.000000e+00 2268/2274 (99%) EPI657631 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 1 (PB2) 4165.3 0.000000e+00 2271/2279 (99%) EPI656775 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4165.3 0.000000e+00 2272/2280 (99%) EPI657831 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4159.8 0.000000e+00 2270/2279 (99%) EPI668808 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4156.1 0.000000e+00 2270/2280 (99%) EPI658868 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4152.4 0.000000e+00 2265/2273 (99%) EPI656871 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4135.8 0.000000e+00 2265/2277 (99%) EPI668844 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 1 (PB2) 4095.1 0.000000e+00 2260/2281 (99%) EPI654178 A/Environment/GD-ZS_44/H9N2/2013-4 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2244/2277 (98%) EPI583591 A/chicken/Dongguan/2827/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI583619 A/chicken/Dongguan/3056/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI654167 A/Environment/GD-YJ_25005/H9N2/2013 (A/H9N2) segment 1 (PB2) 3984.3 0.000000e+00 2237/2277 (98%) EPI628533 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI583723 A/chicken/Dongguan/4254/2013 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI583549 A/chicken/Shenzhen/2403/2013 (A/H9N2) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI837954 A/chicken/Guangdong/SIC14/2013 (A/H9N2) segment 1 (PB2) 3980.7 0.000000e+00 2238/2280 (98%) EPI837990 A/chicken/Guangdong/SIC23/2014 (A/H9N2) segment 1 (PB2) 3978.8 0.000000e+00 2238/2280 (98%) EPI583675 A/chicken/Shenzhen/3745/2013 (A/H9N2) segment 1 (PB2) 3978.8 0.000000e+00 2238/2280 (98%) EPI583661 A/chicken/Dongguan/3550/2013 (A/H9N2) segment 1 (PB2) 3978.8 0.000000e+00 2238/2280 (98%) EPI583500 A/chicken/Shenzhen/1799/2013 (A/H9N2) segment 1 (PB2) 3978.8 0.000000e+00 2238/2280 (98%) EPI583703 A/silkie chicken/Dongguan/4184/2013 (A/H9N2) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI583444 A/chicken/Shenzhen/1377/2013 (A/H9N2) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI628493 A/Guangdong/02124/2014 (A/H7N9) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI628093 A/Guangdong/0012/2014 (A/H7N9) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI503496 A/Huizhou/01/2013 (A/H7N9) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI476698 A/Guangdong/1/2013 (A/H7N9) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI655883 A/GD-13/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2229/2277 (97%) EPI655875 A/GD-12/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2229/2277 (97%) EPI628509 A/Guangdong/24999/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI628485 A/Guangdong/02125/2014 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI628421 A/Guangdong/037/2014 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI627981 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI627973 A/Guangdong/0081/2014 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI627742 A/Guangdong/0010/2014 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI602023 A/chicken/Dongguan/4190/2013 (A/H0) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI597437 A/chicken/Dongguan/1009/2014 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI597143 A/chicken/Dongguan/1670/2014 (A/H0) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI597129 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI596868 A/silkie chicken/Dongguan/952/2014 (A/H0) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581995 A/chicken/Dongguan/4195/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581920 A/silkie chicken/Dongguan/3990/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581877 A/chicken/Dongguan/3894/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581760 A/silkie chicken/Dongguan/3528/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581754 A/silkie chicken/Dongguan/3526/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581748 A/silkie chicken/Dongguan/3525/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581729 A/chicken/Dongguan/3491/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581722 A/chicken/Dongguan/3488/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581690 A/chicken/Dongguan/3418/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581641 A/silkie chicken/Dongguan/3166/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581634 A/chicken/Dongguan/3146/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581620 A/chicken/Dongguan/3141/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI581613 A/chicken/Dongguan/3112/2013 (A/H7N9) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI837953 A/chicken/Guangdong/SIC31/2014 (A/H9N2) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI656027 A/GD-81/2014/H7N9/2014-01-30 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2228/2277 (97%) EPI655891 A/GD-18/2014/H7N9/2014-01-07 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2228/2277 (97%) EPI655867 A/GD-10/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2228/2277 (97%) EPI628525 A/environment/Guangdong/25003/2013 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI628501 A/Guangdong/02620/2014 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI628453 A/Guangdong/034/2014 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI628445 A/environment/Guangdong/02622/2013 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI628101 A/Guangdong/0019/2014 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI627997 A/Guangdong/0065/2014 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI627949 A/Guangdong/0069/2014 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI627941 A/Guangdong/0066/2014 (A/H7N9) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI668881 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668865 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668857 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668849 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668738 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664560 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664536 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658738 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658690 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658682 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658002 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657797 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657701 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657685 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657653 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657645 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657637 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657629 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657509 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587624 A/Yunnan/14564/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587616 A/Yunnan/14563/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587553 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587545 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587537 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587529 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658866 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1810.8 0.000000e+00 980/980 (100%) EPI668890 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668873 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668841 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668813 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI664600 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI659154 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI659098 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658706 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658026 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657693 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657661 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587569 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668804 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI668798 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI657829 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI641399 A/Yunnan/0127/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI656773 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1790.5 0.000000e+00 969/969 (100%) EPI656869 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1788.7 0.000000e+00 968/968 (100%) EPI838142 A/chicken/Guangdong/SIC17/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI596715 A/chicken/Wenzhou/3330/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI583836 A/chicken/Suzhou/4957/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI497543 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI497530 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI838129 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI838124 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602131 A/chicken/Jiangxi/18926/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602123 A/chicken/Jiangxi/18474/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602081 A/chicken/Jiangxi/19982/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602070 A/chicken/Jiangxi/19967/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602062 A/chicken/Jiangxi/19912/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI601359 A/chicken/Jiangxi/1226/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600106 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600092 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600085 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600078 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600071 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600057 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599819 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599540 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599526 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599498 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599477 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599449 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599392 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599184 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI591974 A/chicken/Suzhou/4833/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI589862 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI589854 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI583829 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI568615 A/chicken/Shaanxi/xa0414/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI557786 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI515841 A/Chicken/Nantong/031-2/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI515833 A/Chicken/Nanjing/023/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470069 A/chicken/Rizhao/1313/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470066 A/chicken/Rizhao/723/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470064 A/chicken/Rizhao/437/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470063 A/chicken/Rizhao/249/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470062 A/chicken/Rizhao/85/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470060 A/chicken/Rizhao/15/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI736588 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI692271 A/chicken/Shandong/WG18/2011 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI652908 A/chicken/Qingdao/017/2014 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI602141 A/chicken/Jiangxi/18955/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601918 A/chicken/Jiangxi/23241/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601812 A/chicken/Jiangxi/36266/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601562 A/chicken/Jiangxi/36247/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601525 A/chicken/Jiangxi/20420/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601379 A/chicken/Jiangxi/1243/2014 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601268 A/chicken/Jiangxi/1269/2014 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599777 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599766 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599702 A/chicken/Jiangxi/23259/2013 (A/H10N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599561 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599547 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI668886 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI641400 A/Yunnan/0127/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI587628 A/Yunnan/14564/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI587620 A/Yunnan/14563/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI691537 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI668878 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI668742 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI587557 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI691543 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI668862 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI668853 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI658710 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI658030 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI657641 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI587533 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI659158 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657833 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657665 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657649 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI656777 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI659102 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2534.7 0.000000e+00 1376/1378 (99%) EPI691550 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI668870 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI664604 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI658694 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657705 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657697 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657689 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657633 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI641397 A/chicken/Yunnan/25A/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI587549 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI587541 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1376/1380 (99%) EPI664564 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI658686 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI658006 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI656873 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2527.3 0.000000e+00 1376/1380 (99%) EPI657657 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 6 (NA) 2525.5 0.000000e+00 1375/1379 (99%) EPI587573 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 6 (NA) 2523.6 0.000000e+00 1376/1380 (99%) EPI668814 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI664540 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657801 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657513 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI641395 A/chicken/Yunnan/22/2015 (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI641393 A/chicken/Yunnan/19/2015 (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI658742 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1372/1377 (99%) EPI668894 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668846 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668806 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI602414 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI601944 A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI599294 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI530056 A/duck/Jiangxi/95/2014 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI839149 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI687500 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI668797 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI656721 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI602493 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI599322 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI550765 A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI550754 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI656601 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2497.8 0.000000e+00 1370/1379 (99%) EPI656657 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI656641 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI601070 A/chicken/Jiangxi/13259/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1371/1381 (99%) EPI599315 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI658870 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2492.3 0.000000e+00 1355/1358 (99%) EPI656649 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI656633 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI656625 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI602319 A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602312 A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602305 A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602298 A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602274 A/chicken/Jiangxi/13238/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602267 A/chicken/Jiangxi/13235/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602260 A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602253 A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602236 A/chicken/Jiangxi/13264/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602229 A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602222 A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602208 A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602201 A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602155 A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602048 A/chicken/Dongguan/2818/2013 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI601464 A/chicken/Jiangxi/13211/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601453 A/chicken/Jiangxi/13198/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601443 A/chicken/Jiangxi/13196/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601406 A/chicken/Jiangxi/13253/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601394 A/chicken/Jiangxi/13237/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601342 A/chicken/Jiangxi/13272/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601197 A/chicken/Jiangxi/13216/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601190 A/chicken/Jiangxi/13215/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601180 A/chicken/Jiangxi/13212/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601171 A/chicken/Jiangxi/13206/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601162 A/chicken/Jiangxi/13204/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601152 A/chicken/Jiangxi/13246/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601126 A/chicken/Jiangxi/13228/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601117 A/chicken/Jiangxi/13219/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601099 A/chicken/Jiangxi/13271/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601080 A/chicken/Jiangxi/13260/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%)