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Everything posted by niman
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Descriptions Align Segment-ID Name Score E-Value Identity EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 971/971 (100%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 965/971 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 965/971 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 965/971 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1761.0 0.000000e+00 965/971 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1755.4 0.000000e+00 964/971 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1755.4 0.000000e+00 964/971 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1700.0 0.000000e+00 954/971 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1689.0 0.000000e+00 952/971 (98%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1683.4 0.000000e+00 952/972 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1674.2 0.000000e+00 949/971 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602345 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602338 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602331 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602324 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI601720 A/duck/Jiangxi/29297/2013 (A/H0) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599882 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599875 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599868 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599861 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599854 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599847 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599840 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599833 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI704506 A/duck/Mongolia/326/2015 (A/H10N3) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI704498 A/duck/Mongolia/245/2015 (A/H10N3) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI704302 A/duck/Mongolia/141/2015 (A/H0N2) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI316755 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI306424 A/shoveler/Koymor/118/2009 (A/H3) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI693701 A/duck/Mongolia/20/2015 (A/H3N8) segment 7 (MP) 1655.7 0.000000e+00 946/971 (97%) EPI514272 A/mallard/Sweden/52334/2006 (A/H4N6) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI685607 A/duck/Vietnam/HU1-151/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI647783 A/duck/Vietnam/HU1-148/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI647782 A/duck/Vietnam/HU1-16/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI647780 A/muscovy duck/Vietnam/HU1-399/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI618959 A/mallard/Sweden/1417/2002 (A/H10N7) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513559 A/mallard/Sweden/101180/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513552 A/mallard/Sweden/101081/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513538 A/mallard/Sweden/100881/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513499 A/mallard/Sweden/101431/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513485 A/mallard/Sweden/101298/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI377995 A/common teal/Netherlands/2/2008 (A/H2N3) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372437 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372413 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372405 A/shoveler/Egypt/00215-NAMRU3/2007 (A/H7N9) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372397 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI296609 A/mallard/Sweden/90/2005 (A/H11N9) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI231188 A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI220565 A/mallard/Czech Republic/15307-17/2008 (A/H0) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI190357 A/gadwall/Netherlands/1/2006 (A/H9N2) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI181962 A/mallard/Netherlands/2/2005 (A/H4N2) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI231180 A/spot-billed duck/Korea/537/2008 (A/H6N1) segment 7 (MP) 1648.3 0.000000e+00 945/971 (97%)
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Descriptions Align Segment-ID Name Score E-Value Identity EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2555.0 0.000000e+00 1398/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2508.9 0.000000e+00 1390/1406 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2475.6 0.000000e+00 1384/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2464.6 0.000000e+00 1382/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2442.4 0.000000e+00 1378/1406 (98%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1375/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2396.2 0.000000e+00 1351/1378 (98%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1369/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2359.3 0.000000e+00 1358/1398 (97%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1353/1395 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1360/1407 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703636 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI552748 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1696/1705 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1666/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1664/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1599/1609 (99%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2911.4 0.000000e+00 1660/1702 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1660/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1654/1704 (97%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1651/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2826.5 0.000000e+00 1646/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2822.8 0.000000e+00 1638/1693 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2787.7 0.000000e+00 1640/1705 (96%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2761.9 0.000000e+00 1634/1704 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2748.9 0.000000e+00 1633/1705 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2743.4 0.000000e+00 1631/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2737.9 0.000000e+00 1631/1705 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1630/1705 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1630/1705 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2728.6 0.000000e+00 1629/1705 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013(H5N6) (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2717.5 0.000000e+00 1628/1705 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2715.7 0.000000e+00 1626/1704 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2713.8 0.000000e+00 1627/1705 (95%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2972.4 0.000000e+00 1609/1609 (100%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 2966.8 0.000000e+00 1608/1609 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 2961.3 0.000000e+00 1607/1609 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 2950.2 0.000000e+00 1605/1609 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1603/1609 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1602/1609 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1602/1609 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1602/1609 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1602/1609 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1599/1609 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1598/1609 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1599/1610 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1597/1609 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1597/1609 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1597/1609 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1597/1609 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1597/1609 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 2867.1 0.000000e+00 1590/1609 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2800.6 0.000000e+00 1578/1609 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2800.6 0.000000e+00 1578/1609 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2789.6 0.000000e+00 1576/1609 (97%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2778.5 0.000000e+00 1574/1609 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2772.9 0.000000e+00 1573/1609 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2761.9 0.000000e+00 1571/1609 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2761.9 0.000000e+00 1571/1609 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2761.9 0.000000e+00 1571/1609 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2756.3 0.000000e+00 1570/1609 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2756.3 0.000000e+00 1570/1609 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2756.3 0.000000e+00 1570/1609 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2750.8 0.000000e+00 1570/1610 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2748.9 0.000000e+00 1568/1608 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2745.2 0.000000e+00 1569/1610 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2745.2 0.000000e+00 1568/1609 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2745.2 0.000000e+00 1568/1609 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2745.2 0.000000e+00 1568/1609 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2739.7 0.000000e+00 1567/1609 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2734.2 0.000000e+00 1567/1610 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2734.2 0.000000e+00 1566/1609 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2728.6 0.000000e+00 1565/1609 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2717.5 0.000000e+00 1563/1609 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2717.5 0.000000e+00 1563/1609 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2717.5 0.000000e+00 1563/1609 (97%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2717.5 0.000000e+00 1563/1609 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2717.5 0.000000e+00 1563/1609 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2712.0 0.000000e+00 1563/1610 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2706.5 0.000000e+00 1561/1609 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2700.9 0.000000e+00 1561/1610 (96%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2695.4 0.000000e+00 1559/1609 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2689.8 0.000000e+00 1558/1609 (96%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2686.1 0.000000e+00 1555/1612 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2667.7 0.000000e+00 1554/1609 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2667.7 0.000000e+00 1554/1609 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2667.7 0.000000e+00 1554/1609 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2667.7 0.000000e+00 1554/1609 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2662.1 0.000000e+00 1553/1609 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2656.6 0.000000e+00 1552/1609 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2656.6 0.000000e+00 1552/1609 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2654.8 0.000000e+00 1551/1608 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2645.5 0.000000e+00 1550/1609 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2628.9 0.000000e+00 1547/1609 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2628.9 0.000000e+00 1547/1609 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2623.4 0.000000e+00 1546/1609 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2617.8 0.000000e+00 1545/1609 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2617.8 0.000000e+00 1545/1609 (96%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2606.7 0.000000e+00 1544/1610 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2590.1 0.000000e+00 1540/1609 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2590.1 0.000000e+00 1540/1609 (95%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2584.6 0.000000e+00 1541/1611 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2562.4 0.000000e+00 1536/1610 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2562.4 0.000000e+00 1536/1610 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2562.4 0.000000e+00 1537/1611 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2562.4 0.000000e+00 1536/1610 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2558.7 0.000000e+00 1535/1610 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2556.9 0.000000e+00 1535/1610 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2556.9 0.000000e+00 1535/1610 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2556.9 0.000000e+00 1535/1610 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2556.9 0.000000e+00 1535/1610 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2556.9 0.000000e+00 1535/1610 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2556.9 0.000000e+00 1535/1610 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2556.9 0.000000e+00 1535/1610 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013(H5N6) (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1535/1611 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI602103 A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2551.3 0.000000e+00 1534/1610 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2547.7 0.000000e+00 1534/1610 (95%) EPI687547 A/Goose/ Guangdong /SSZYP/2015(H5N6) (A/H5N6) segment 4 (HA) 2545.8 0.000000e+00 1533/1610 (95%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2545.8 0.000000e+00 1534/1611 (95%) EPI602491 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA) 2545.8 0.000000e+00 1533/1610 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2545.8 0.000000e+00 1534/1611 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2545.8 0.000000e+00 1534/1611 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2545.8 0.000000e+00 1534/1611 (95%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 812/812 (100%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1489.5 0.000000e+00 810/812 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1489.5 0.000000e+00 810/812 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1489.5 0.000000e+00 810/812 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1489.5 0.000000e+00 810/812 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1485.8 0.000000e+00 809/812 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 806/812 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 807/812 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 807/812 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 807/812 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 807/812 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 807/812 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1467.4 0.000000e+00 806/812 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 804/812 (99%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 803/813 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1434.1 0.000000e+00 801/813 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 801/813 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 801/813 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1428.6 0.000000e+00 800/813 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1423.0 0.000000e+00 799/813 (98%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 798/813 (98%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1417.5 0.000000e+00 798/813 (98%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 798/814 (98%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 798/814 (98%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 796/813 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 796/813 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 796/813 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1400.9 0.000000e+00 795/813 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1400.9 0.000000e+00 795/813 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1378.7 0.000000e+00 791/813 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1373.2 0.000000e+00 790/813 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1373.2 0.000000e+00 790/813 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1367.6 0.000000e+00 789/813 (97%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1367.6 0.000000e+00 789/813 (97%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI363934 A/duck/Guizhou/1560/2007 (A/H6N8) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI299262 A/avian/Japan/8KI0185/2008 (A/H4N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI299254 A/avian/Japan/8KI0195/2008 (A/H6N8) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI284654 A/duck/Hunan/8-19/2009 (A/H4N2) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI268628 A/duck/Fujian/12035/2005 (A/H6N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI230017 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI262750 A/aquatic bird/Korea/w209/2007 (A/H5N3) segment 8 (NS) 1349.2 0.000000e+00 785/812 (96%) EPI461791 A/environment/Hunan/S11511/2012 (A/H4N9) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI446518 A/environment/Jiangxi/26/2009 (A/H11N9) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI420071 A/mallard/California/2578V/2011 (A/H0) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI419907 A/mallard/California/2552V/2011 (A/H4N8) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI314207 A/wild duck/Taiwan/WB1364/2007 (A/H4N6) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI296191 A/wild duck/Korea/YS44/2004 (A/H1N2) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI837810 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI589175 A/duck/China/J1/2012 (A/H4N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI540193 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI508167 A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI504039 A/wild duck/SH17-1/2008 (A/H2N3) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI420126 A/mallard/California/2594V/2011 (A/H4N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI420119 A/mallard/California/2594P/2011 (A/H4N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI384049 A/duck/Thailand/CU-LM7288T/2010 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI384039 A/duck/Thailand/CU-LM7288C/2010 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI384017 A/duck/Thailand/CU-LM7283C/2010 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI383995 A/duck/Thailand/CU-LM7283T/2010 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI383983 A/duck/Thailand/CU-LM7285C/2010 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI383953 A/duck/Thailand/CU-LM7280C/2010 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI383937 A/duck/Thailand/CU-LM7284C/2010 (A/H7N6) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI276132 A/pintail/Akita/1364/2008 (A/H1N2) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI276127 A/pintail/Akita/1353/2008 (A/H1N2) segment 8 (NS) 1339.9 0.000000e+00 784/813 (96%) EPI760217 A/duck/Hunan/161/2015 (A/H3N6) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI601057 A/duck/Jiangxi/5879/2008 (A/H0) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI470632 A/duck/Jiangxi/22041/2008 (A/H4N9) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI439096 A/chicken/Taiwan/TC149/2010 (A/H4) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI419937 A/mallard/California/2555V/2011 (A/H11N9) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI419819 A/mallard/California/2533V/2011 (A/H4N6) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI419777 A/mallard/California/2525P/2011 (A/H4N6) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI418438 A/mallard/California/2525V/2011 (A/H0) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1334.4 0.000000e+00 784/814 (96%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1334.4 0.000000e+00 784/814 (96%) EPI389736 A/duck/Eastern China/318/2003 (A/H11) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI383969 A/duck/Thailand/CU-LM7279T/2010 (A/H7N6) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI276122 A/pintail/Akita/1265/2008 (A/H1N2) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI276117 A/pintail/Miyagi/1472/2008 (A/H1N1) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI268476 A/mallard/Jiangxi/13228/2005 (A/H6N1) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI256790 A/muscovy duck/Thailand/CU-LM4761/2009 (A/H10N3) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI256782 A/muscovy duck/Thailand/CU-LM4759/2009 (A/H10N3) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI256774 A/muscovy duck/Thailand/CU-LM4754/2009 (A/H10N3) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI182408 A/duck/Primorie/2633/01 (A/H5N3) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%) EPI170823 A/duck/Primorie/2633/01 (A/H5N3) segment 8 (NS) 1334.4 0.000000e+00 783/813 (96%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1448/1448 (100%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2664.0 0.000000e+00 1446/1448 (99%) EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2658.4 0.000000e+00 1445/1448 (99%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2658.4 0.000000e+00 1445/1448 (99%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2658.4 0.000000e+00 1445/1448 (99%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2658.4 0.000000e+00 1445/1448 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2525.5 0.000000e+00 1421/1448 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2520.0 0.000000e+00 1420/1448 (98%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2508.9 0.000000e+00 1418/1448 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2497.8 0.000000e+00 1414/1445 (97%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2488.6 0.000000e+00 1407/1437 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2486.7 0.000000e+00 1414/1448 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2481.2 0.000000e+00 1413/1448 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2481.2 0.000000e+00 1413/1448 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2481.2 0.000000e+00 1413/1448 (97%) EPI816848 A/turkey/Poland/09/2014 (A/H9N2) segment 5 (NP) 2475.6 0.000000e+00 1410/1445 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2475.6 0.000000e+00 1412/1448 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2470.1 0.000000e+00 1409/1445 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2470.1 0.000000e+00 1411/1448 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2470.1 0.000000e+00 1411/1448 (97%) EPI816840 A/turkey/Poland/08/2014 (A/H9N2) segment 5 (NP) 2466.4 0.000000e+00 1405/1440 (97%) EPI484288 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2466.4 0.000000e+00 1403/1437 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2459.0 0.000000e+00 1409/1448 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2459.0 0.000000e+00 1409/1448 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2453.5 0.000000e+00 1408/1448 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2453.5 0.000000e+00 1408/1448 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2453.5 0.000000e+00 1408/1448 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2453.5 0.000000e+00 1409/1449 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2447.9 0.000000e+00 1408/1449 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2442.4 0.000000e+00 1404/1445 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2442.4 0.000000e+00 1405/1446 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2436.9 0.000000e+00 1406/1449 (97%) EPI463226 A/mallard/Sweden/100580/2009 (A/H6N2) segment 5 (NP) 2436.9 0.000000e+00 1405/1448 (97%) EPI463224 A/mallard/Sweden/100559/2009 (A/H6N2) segment 5 (NP) 2436.9 0.000000e+00 1405/1448 (97%) EPI463221 A/mallard/Sweden/100537/2009 (A/H6N2) segment 5 (NP) 2436.9 0.000000e+00 1405/1448 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2436.9 0.000000e+00 1406/1449 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2436.9 0.000000e+00 1405/1448 (97%) EPI463229 A/mallard/Sweden/100633/2009 (A/H6N2) segment 5 (NP) 2425.8 0.000000e+00 1403/1448 (96%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2420.2 0.000000e+00 1403/1449 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2420.2 0.000000e+00 1403/1449 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2416.5 0.000000e+00 1386/1425 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2416.5 0.000000e+00 1386/1425 (97%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2414.7 0.000000e+00 1401/1448 (96%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2414.7 0.000000e+00 1401/1448 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2414.7 0.000000e+00 1401/1448 (96%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2409.2 0.000000e+00 1400/1448 (96%) EPI332954 A/Anas_platyrhynchos/Camargue/091863/09 (A/H10N7) segment 5 (NP) 2409.2 0.000000e+00 1401/1449 (96%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2409.2 0.000000e+00 1400/1448 (96%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2409.2 0.000000e+00 1400/1448 (96%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2403.6 0.000000e+00 1399/1448 (96%) EPI433356 A/mallard/Czech Republic/15902-12K/2009 (A/H11N2) segment 5 (NP) 2403.6 0.000000e+00 1399/1448 (96%) EPI618666 A/mallard/Sweden/2213/2003 (A/H12N5) segment 5 (NP) 2398.1 0.000000e+00 1399/1449 (96%) EPI251817 A/mallard/Sweden/86/2003 (A/H12N5) segment 5 (NP) 2398.1 0.000000e+00 1399/1449 (96%) EPI118136 A/mallard/Italy/36/2002 (A/H5N3) segment 5 (NP) 2398.1 0.000000e+00 1399/1449 (96%) EPI618101 A/mallard/Sweden/396/2002 (A/H10N4) segment 5 (NP) 2392.5 0.000000e+00 1397/1448 (96%) EPI463238 A/mallard/Sweden/101288/2009 (A/H5N3) segment 5 (NP) 2392.5 0.000000e+00 1397/1448 (96%) EPI377571 A/mallard/Sweden/88/2005 (A/H0) segment 5 (NP) 2392.5 0.000000e+00 1397/1448 (96%) EPI182108 A/mallard/Netherlands/11/2007 (A/H6N5) segment 5 (NP) 2392.5 0.000000e+00 1397/1448 (96%) EPI102231 A/duck/Taiwan/WB29/99 (A/H6N1) segment 5 (NP) 2392.5 0.000000e+00 1398/1449 (96%) EPI69241 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 5 (NP) 2392.5 0.000000e+00 1397/1448 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI463241 A/mallard/Sweden/101368/2009 (A/H4N6) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI433758 A/lesser black-backed gull/Iceland/145/2010 (A/H11N2) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI372284 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI251662 A/mallard/Netherlands/2/1999 (A/H3N5) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI140249 A/migratory duck/Hong Kong/MP2437/2003 (A/H6N1) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI131889 A/sharp-tailed sandpiper/Australia/10/2004 (A/H11N9) segment 5 (NP) 2387.0 0.000000e+00 1396/1448 (96%) EPI102229 A/chicken/Taiwan/165/99 (A/H6N1) segment 5 (NP) 2387.0 0.000000e+00 1397/1449 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2383.3 0.000000e+00 1395/1448 (96%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2381.5 0.000000e+00 1395/1448 (96%) EPI618589 A/mallard/Sweden/3328/2003 (A/H12N5) segment 5 (NP) 2381.5 0.000000e+00 1396/1449 (96%) EPI514846 A/mallard/Sweden/1883/2003 (A/H4N3) segment 5 (NP) 2381.5 0.000000e+00 1396/1449 (96%) EPI513607 A/mallard/Sweden/93225/2009 (A/H4N6) segment 5 (NP) 2381.5 0.000000e+00 1395/1448 (96%) EPI513600 A/mallard/Sweden/93211/2009 (A/H4N6) segment 5 (NP) 2381.5 0.000000e+00 1395/1448 (96%) EPI513561 A/mallard/Sweden/101180/2009 (A/H4N6) segment 5 (NP) 2381.5 0.000000e+00 1395/1448 (96%) EPI513540 A/mallard/Sweden/100881/2009 (A/H4N6) segment 5 (NP) 2381.5 0.000000e+00 1395/1448 (96%) EPI513501 A/mallard/Sweden/101431/2009 (A/H4N6) segment 5 (NP) 2381.5 0.000000e+00 1395/1448 (96%) EPI513487 A/mallard/Sweden/101298/2009 (A/H4N6) segment 5 (NP) 2381.5 0.000000e+00 1395/1448 (96%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3964.0 0.000000e+00 2149/2151 (99%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3960.3 0.000000e+00 2148/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3960.3 0.000000e+00 2148/2151 (99%) EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3951.1 0.000000e+00 2147/2152 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3650.1 0.000000e+00 2077/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3635.3 0.000000e+00 2093/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3624.2 0.000000e+00 2090/2153 (97%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3624.2 0.000000e+00 2069/2122 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3622.4 0.000000e+00 2068/2121 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3607.6 0.000000e+00 2087/2153 (96%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3596.5 0.000000e+00 2083/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3596.5 0.000000e+00 2083/2151 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3591.0 0.000000e+00 2064/2124 (97%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3583.6 0.000000e+00 2064/2126 (97%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3581.8 0.000000e+00 2049/2103 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3579.9 0.000000e+00 2081/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3579.9 0.000000e+00 2081/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3574.4 0.000000e+00 2081/2153 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3552.2 0.000000e+00 2077/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3552.2 0.000000e+00 2077/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3552.2 0.000000e+00 2077/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3552.2 0.000000e+00 2077/2153 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3546.7 0.000000e+00 2076/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3541.1 0.000000e+00 2074/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3535.6 0.000000e+00 2074/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI372287 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI823764 A/environment/Kamchatka/23/2016 (A/H13N8) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI704543 A/duck/Mongolia/742/2015 (A/H10N7) segment 3 (PA) 3530.1 0.000000e+00 2073/2153 (96%) EPI704421 A/duck/Mongolia/655/2015 (A/H2N3) segment 3 (PA) 3530.1 0.000000e+00 2073/2153 (96%) EPI296486 A/mallard/Netherlands/28/2006 (A/H3N1) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI222163 A/mallard/Altai/1208/2007 (A/H3N6) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI222094 A/garganey/Altai/1216/2007 (A/H3N6) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI704388 A/duck/Mongolia/482/2015 (A/H2N3) segment 3 (PA) 3524.5 0.000000e+00 2072/2153 (96%) EPI372351 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI613953 A/mallard/Sweden/101993/2009 (A/H2N9) segment 3 (PA) 3513.4 0.000000e+00 2068/2151 (96%) EPI598732 A/duck/Jiangxi/32180/2013 (A/H0) segment 3 (PA) 3513.4 0.000000e+00 2069/2152 (96%) EPI598348 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 3 (PA) 3513.4 0.000000e+00 2069/2152 (96%) EPI511172 A/mallard/Sweden/52299/2006 (A/H4N6) segment 3 (PA) 3513.4 0.000000e+00 2069/2152 (96%) EPI234643 A/duck/Beijing/40/04 (A/H3N8) segment 3 (PA) 3513.4 0.000000e+00 2068/2151 (96%) EPI232397 A/duck/Beijing/61/05 (A/H3N8) segment 3 (PA) 3513.4 0.000000e+00 2068/2151 (96%) EPI181966 A/mallard/Netherlands/2/2005 (A/H4N2) segment 3 (PA) 3513.4 0.000000e+00 2068/2151 (96%) EPI613943 A/mallard/Sweden/4932/2004 (A/H9N2) segment 3 (PA) 3507.9 0.000000e+00 2067/2151 (96%) EPI598766 A/duck/Jiangxi/5423/2014 (A/H0) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI598764 A/duck/Jiangxi/34864/2013 (A/H0) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI591116 A/duck/Jiangxi/5418/2014 (A/H0) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI447409 A/mallard/Italy/3401/2005 (A/H5N1) segment 3 (PA) 3507.9 0.000000e+00 2067/2151 (96%) EPI447395 A/mallard/Italy/3401/2005 (A/H5N1) segment 3 (PA) 3507.9 0.000000e+00 2067/2151 (96%) EPI447380 A/mallard/Italy/3401/2005 (A/H5N1) segment 3 (PA) 3507.9 0.000000e+00 2067/2151 (96%) EPI447373 A/mallard/Italy/3401/2005 (A/H5N1) segment 3 (PA) 3507.9 0.000000e+00 2067/2151 (96%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4163.5 0.000000e+00 2267/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4159.8 0.000000e+00 2266/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4159.8 0.000000e+00 2266/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2265/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4065.6 0.000000e+00 2249/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3928.9 0.000000e+00 2225/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3923.4 0.000000e+00 2224/2274 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3884.6 0.000000e+00 2217/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3884.6 0.000000e+00 2217/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3879.1 0.000000e+00 2217/2275 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3868.0 0.000000e+00 2212/2271 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3862.5 0.000000e+00 2214/2275 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3844.0 0.000000e+00 2198/2257 (97%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3840.3 0.000000e+00 2210/2275 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3840.3 0.000000e+00 2210/2275 (97%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%) EPI617772 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%) EPI602380 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2208/2275 (97%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2206/2274 (97%) EPI602453 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602446 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602432 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602425 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602408 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602401 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602387 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602373 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602348 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602341 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602334 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602327 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI599878 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI599871 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI599857 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI599850 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI599843 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI599829 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI599836 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3818.1 0.000000e+00 2205/2274 (96%) EPI602439 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 2 (PB1) 3818.1 0.000000e+00 2206/2275 (96%) EPI602394 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 2 (PB1) 3818.1 0.000000e+00 2206/2275 (96%) EPI527629 A/common shelduck/Mongolia/2106/2011 (A/H3N8) segment 2 (PB1) 3818.1 0.000000e+00 2205/2274 (96%) EPI372392 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 2 (PB1) 3818.1 0.000000e+00 2205/2274 (96%) EPI372353 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 2 (PB1) 3818.1 0.000000e+00 2206/2275 (96%) EPI599864 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 2 (PB1) 3812.6 0.000000e+00 2206/2276 (96%) EPI372479 A/teal/Egypt/12908-NAMRU3/2005 (A/H10N1) segment 2 (PB1) 3812.6 0.000000e+00 2206/2276 (96%) EPI515123 A/duck/Vietnam/LBM533/2013 (A/H3N6) segment 2 (PB1) 3801.5 0.000000e+00 2202/2274 (96%) EPI372487 A/garganey/Ukraine/05834-NAMRU3/2006 (A/H10N9) segment 2 (PB1) 3801.5 0.000000e+00 2203/2275 (96%) EPI704281 A/duck/Mongolia/118/2015 (A/H4N6) segment 2 (PB1) 3796.0 0.000000e+00 2201/2274 (96%) EPI540301 A/duck/Bangladesh/1800/2010 (A/H3N6) segment 2 (PB1) 3796.0 0.000000e+00 2201/2274 (96%) EPI540293 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 2 (PB1) 3796.0 0.000000e+00 2201/2274 (96%) EPI372400 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 2 (PB1) 3796.0 0.000000e+00 2201/2274 (96%) EPI693712 A/duck/Mongolia/66/2015 (A/H10N2) segment 2 (PB1) 3790.4 0.000000e+00 2203/2277 (96%) EPI692566 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 2 (PB1) 3790.4 0.000000e+00 2200/2274 (96%) EPI618255 A/mallard/Sweden/79196/2008 (A/H0) segment 2 (PB1) 3790.4 0.000000e+00 2201/2275 (96%) EPI527621 A/northern shoveler/Mongolia/899V/2009 (A/H3N6) segment 2 (PB1) 3790.4 0.000000e+00 2201/2275 (96%) EPI513699 A/mallard/Sweden/80014/2008 (A/H4N6) segment 2 (PB1) 3790.4 0.000000e+00 2201/2275 (96%) EPI269009 A/duck/Hunan/491/2005 (A/H6N2) segment 2 (PB1) 3790.4 0.000000e+00 2201/2275 (96%) EPI683152 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 2 (PB1) 3784.9 0.000000e+00 2200/2275 (96%) EPI683125 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 2 (PB1) 3784.9 0.000000e+00 2199/2274 (96%) EPI618509 A/mallard/Sweden/4932/2004 (A/H9N2) segment 2 (PB1) 3784.9 0.000000e+00 2200/2275 (96%) EPI540197 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 2 (PB1) 3784.9 0.000000e+00 2199/2274 (96%) EPI401307 A/duck/Korea/DY104/2007 (A/H4N6) segment 2 (PB1) 3784.9 0.000000e+00 2200/2275 (96%) EPI372273 A/teal/Egypt/20431-NAMRU3/2003 (A/H1N2) segment 2 (PB1) 3784.9 0.000000e+00 2200/2275 (96%) EPI257226 A/Anas platyrhynchos/09-884/2008 (A/H5N3) segment 2 (PB1) 3784.9 0.000000e+00 2200/2275 (96%) EPI806628 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 2 (PB1) 3779.4 0.000000e+00 2200/2276 (96%) EPI704420 A/duck/Mongolia/655/2015 (A/H2N3) segment 2 (PB1) 3779.4 0.000000e+00 2198/2274 (96%) EPI704386 A/duck/Mongolia/482/2015 (A/H2N3) segment 2 (PB1) 3779.4 0.000000e+00 2198/2274 (96%) EPI704378 A/duck/Mongolia/405/2015 (A/H3N6) segment 2 (PB1) 3779.4 0.000000e+00 2198/2274 (96%) EPI704305 A/duck/Mongolia/154/2015 (A/H0N2) segment 2 (PB1) 3779.4 0.000000e+00 2201/2277 (96%) EPI600151 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 2 (PB1) 3779.4 0.000000e+00 2199/2275 (96%) EPI513630 A/mallard/Sweden/80195/2008 (A/H4N6) segment 2 (PB1) 3779.4 0.000000e+00 2199/2275 (96%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4169.0 0.000000e+00 2272/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4169.0 0.000000e+00 2272/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4169.0 0.000000e+00 2272/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4169.0 0.000000e+00 2272/2280 (99%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4165.3 0.000000e+00 2271/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3936.3 0.000000e+00 2230/2280 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3908.6 0.000000e+00 2225/2280 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3903.1 0.000000e+00 2224/2280 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3903.1 0.000000e+00 2224/2280 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3897.6 0.000000e+00 2223/2280 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3875.4 0.000000e+00 2219/2280 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3831.1 0.000000e+00 2211/2280 (96%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3831.1 0.000000e+00 2211/2280 (96%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3825.5 0.000000e+00 2210/2280 (96%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3825.5 0.000000e+00 2211/2281 (96%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3820.0 0.000000e+00 2210/2281 (96%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3797.8 0.000000e+00 2206/2281 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3797.8 0.000000e+00 2206/2281 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3797.8 0.000000e+00 2206/2281 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3786.8 0.000000e+00 2203/2280 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3786.8 0.000000e+00 2203/2280 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3781.2 0.000000e+00 2202/2280 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3775.7 0.000000e+00 2203/2282 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3770.1 0.000000e+00 2201/2281 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3764.6 0.000000e+00 2200/2281 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3764.6 0.000000e+00 2200/2281 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3764.6 0.000000e+00 2200/2281 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3759.1 0.000000e+00 2198/2280 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3759.1 0.000000e+00 2199/2281 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3753.5 0.000000e+00 2197/2280 (96%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3753.5 0.000000e+00 2199/2282 (96%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3753.5 0.000000e+00 2199/2282 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3742.4 0.000000e+00 2196/2281 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3736.9 0.000000e+00 2195/2281 (96%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3731.4 0.000000e+00 2194/2281 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3731.4 0.000000e+00 2195/2282 (96%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3731.4 0.000000e+00 2194/2281 (96%) EPI222084 A/garganey/Altai/1213/2007 (A/H5N2) segment 1 (PB2) 3731.4 0.000000e+00 2195/2282 (96%) EPI600967 A/duck/Jiangxi/24570/2009 (A/H0) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI527565 A/ruddy shelduck/Mongolia/1189/2010 (A/H7N1) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI469175 A/northern shoveler/Hong Kong/MPL133/2010 (A/H2N9) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI527537 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 1 (PB2) 3720.3 0.000000e+00 2192/2281 (96%) EPI469224 A/duck/Jiangxi/16309/2010 (A/H7N7) segment 1 (PB2) 3720.3 0.000000e+00 2192/2281 (96%) EPI540412 A/environment/Bangladesh/1008/2010 (A/H7N9) segment 1 (PB2) 3709.2 0.000000e+00 2190/2281 (96%) EPI671741 A/lesser white-fronted goose/HuNan/412-3Y/2010 (A/H7N7) segment 1 (PB2) 3703.7 0.000000e+00 2194/2286 (95%) EPI649170 A/duck/Zhejiang/925170/2014 (A/H4N2) segment 1 (PB2) 3703.7 0.000000e+00 2189/2281 (95%) EPI649169 A/duck/Zhejiang/925168/2014 (A/H4N2) segment 1 (PB2) 3703.7 0.000000e+00 2189/2281 (95%) EPI649168 A/duck/Zhejiang/925166/2014 (A/H4N2) segment 1 (PB2) 3703.7 0.000000e+00 2189/2281 (95%) EPI649167 A/duck/Zhejiang/925161/2014 (A/H4N2) segment 1 (PB2) 3703.7 0.000000e+00 2189/2281 (95%) EPI469173 A/northern shoveler/Hong Kong/MPL961/2011 (A/H2N9) segment 1 (PB2) 3698.1 0.000000e+00 2188/2281 (95%) EPI540260 A/duck/Bangladesh/1584/2010 (A/H1N3) segment 1 (PB2) 3687.0 0.000000e+00 2186/2281 (95%) EPI513573 A/mallard/Sweden/80348/2008 (A/H0) segment 1 (PB2) 3687.0 0.000000e+00 2187/2282 (95%) EPI584405 A/duck/Hunan/S4280/2009 (A/H10N8) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI760218 A/duck/Hunan/7/2015 (A/H3N6) segment 1 (PB2) 3676.0 0.000000e+00 2183/2280 (95%) EPI540236 A/duck/Bangladesh/1352/2009 (A/H1N1) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI540196 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 1 (PB2) 3676.0 0.000000e+00 2184/2281 (95%) EPI372328 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 1 (PB2) 3672.3 0.000000e+00 2184/2282 (95%) EPI527558 A/velvet scoter/Mongolia/986V/2009 (A/H7N3) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI513241 A/mallard/Sweden/104925/2009 (A/H4N6) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI692605 A/goose/Jiangsu/S2433/2011 (A/H4N6) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI401294 A/wild duck/Korea/CSM4-28/2010 (A/H4N6) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI354433 A/chicken/Pakistan/NARC-16945/2010 (A/H3N1) segment 1 (PB2) 3664.9 0.000000e+00 2182/2281 (95%) EPI221960 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI221952 A/water/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI823912 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2121/2191 (96%) EPI692525 A/duck/Jiangsu/S2447/2011 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI540388 A/duck/Bangladesh/1559/2009 (A/H5N2) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI527577 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 1 (PB2) 3659.3 0.000000e+00 2145/2227 (96%) EPI401308 A/duck/Korea/DY104/2007 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI383926 A/duck/Thailand/CU-7518C/2010 (A/H3N8) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI221976 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI221968 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI540300 A/duck/Bangladesh/1800/2010 (A/H3N6) segment 1 (PB2) 3653.8 0.000000e+00 2180/2281 (95%) EPI540252 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 1 (PB2) 3653.8 0.000000e+00 2181/2282 (95%) EPI513596 A/mallard/Sweden/81019/2008 (A/H4N6) segment 1 (PB2) 3653.8 0.000000e+00 2180/2281 (95%) EPI384026 A/duck/Thailand/CU-7519C/2010 (A/H3N8) segment 1 (PB2) 3653.8 0.000000e+00 2181/2282 (95%) EPI540527 A/duck/Bangladesh/727/2011 (A/H2N4) segment 1 (PB2) 3648.3 0.000000e+00 2180/2282 (95%) EPI540292 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 1 (PB2) 3648.3 0.000000e+00 2180/2282 (95%) EPI527547 A/ruddy shelduck/Mongolia/598C2/2009 (A/H7N3) segment 1 (PB2) 3648.3 0.000000e+00 2180/2282 (95%) EPI461808 A/environment/Hunan/S4350/2011 (A/H3N8) segment 1 (PB2) 3648.3 0.000000e+00 2180/2282 (95%) EPI387519 A/snow goose/Mongolia/1-29/2008 (A/H3N8) segment 1 (PB2) 3646.4 0.000000e+00 2178/2280 (95%) EPI387520 A/snow goose/Mongolia/1-44/2008 (A/H3N8) segment 1 (PB2) 3644.6 0.000000e+00 2177/2279 (95%) EPI514962 A/mallard/Sweden/79391/2008 (A/H4N2) segment 1 (PB2) 3642.7 0.000000e+00 2179/2282 (95%) EPI513902 A/mallard/Sweden/79308/2008 (A/H4N2) segment 1 (PB2) 3642.7 0.000000e+00 2179/2282 (95%) EPI513895 A/mallard/Sweden/79230/2008 (A/H0) segment 1 (PB2) 3642.7 0.000000e+00 2179/2282 (95%) EPI513865 A/mallard/Sweden/79367/2008 (A/H4N6) segment 1 (PB2) 3642.7 0.000000e+00 2179/2282 (95%) EPI513851 A/mallard/Sweden/79332/2008 (A/H4N6) segment 1 (PB2) 3642.7 0.000000e+00 2179/2282 (95%) EPI513828 A/mallard/Sweden/79328/2008 (A/H4N6) segment 1 (PB2) 3642.7 0.000000e+00 2179/2282 (95%) EPI513826 A/mallard/Sweden/79956/2008 (A/H0) segment 1 (PB2) 3642.7 0.000000e+00 2179/2282 (95%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1773.9 0.000000e+00 972/978 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1683.4 0.000000e+00 959/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602345 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602338 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602331 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602324 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI601720 A/duck/Jiangxi/29297/2013 (A/H0) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599882 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599875 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599868 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599861 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599854 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599847 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599840 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI599833 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI704506 A/duck/Mongolia/326/2015 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 958/984 (97%) EPI704498 A/duck/Mongolia/245/2015 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 958/984 (97%) EPI704302 A/duck/Mongolia/141/2015 (A/H0N2) segment 7 (MP) 1670.5 0.000000e+00 958/984 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI306424 A/shoveler/Koymor/118/2009 (A/H3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI316755 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 7 (MP) 1668.6 0.000000e+00 955/981 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI693701 A/duck/Mongolia/20/2015 (A/H3N8) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI685607 A/duck/Vietnam/HU1-151/2014 (A/H11N7) segment 7 (MP) 1659.4 0.000000e+00 954/982 (97%) EPI647783 A/duck/Vietnam/HU1-148/2014 (A/H11N7) segment 7 (MP) 1659.4 0.000000e+00 954/982 (97%) EPI647782 A/duck/Vietnam/HU1-16/2014 (A/H11N7) segment 7 (MP) 1659.4 0.000000e+00 954/982 (97%) EPI647780 A/muscovy duck/Vietnam/HU1-399/2014 (A/H11N7) segment 7 (MP) 1659.4 0.000000e+00 954/982 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI513559 A/mallard/Sweden/101180/2009 (A/H4N6) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI513552 A/mallard/Sweden/101081/2009 (A/H4N6) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI513538 A/mallard/Sweden/100881/2009 (A/H4N6) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI513499 A/mallard/Sweden/101431/2009 (A/H4N6) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI513485 A/mallard/Sweden/101298/2009 (A/H4N6) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI377995 A/common teal/Netherlands/2/2008 (A/H2N3) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI372437 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 7 (MP) 1659.4 0.000000e+00 956/984 (97%) EPI372413 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI372405 A/shoveler/Egypt/00215-NAMRU3/2007 (A/H7N9) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI372397 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI231188 A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI181962 A/mallard/Netherlands/2/2005 (A/H4N2) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI220565 A/mallard/Czech Republic/15307-17/2008 (A/H0) segment 7 (MP) 1657.6 0.000000e+00 954/982 (97%) EPI619097 A/mallard/Sweden/68537/2007 (A/H0) segment 7 (MP) 1653.9 0.000000e+00 954/983 (97%) EPI618547 A/mallard/Sweden/58705/2006 (A/H5N2) segment 7 (MP) 1653.9 0.000000e+00 954/983 (97%) EPI618488 A/mallard/Sweden/101589/2009 (A/H11N9) segment 7 (MP) 1653.9 0.000000e+00 954/983 (97%) EPI559668 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1653.9 0.000000e+00 954/983 (97%) EPI544354 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1653.9 0.000000e+00 954/983 (97%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2588.3 0.000000e+00 1404/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2486.7 0.000000e+00 1387/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1382/1407 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2442.4 0.000000e+00 1379/1407 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1375/1407 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1370/1407 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1370/1407 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1371/1408 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1369/1407 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1367/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1367/1407 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1368/1408 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2374.1 0.000000e+00 1348/1379 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2370.4 0.000000e+00 1366/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2364.8 0.000000e+00 1365/1407 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2364.8 0.000000e+00 1366/1408 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2359.3 0.000000e+00 1365/1408 (96%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1355/1399 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1350/1396 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1357/1408 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1355/1407 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI703636 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1354/1408 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1354/1408 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI552748 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1353/1407 (96%) EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2298.4 0.000000e+00 1354/1408 (96%)
-
Descriptions Align Segment-ID Name Score E-Value Identity EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1690/1705 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2950.2 0.000000e+00 1605/1609 (99%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1661/1705 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1661/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2894.8 0.000000e+00 1657/1702 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1659/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1655/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1653/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2859.7 0.000000e+00 1652/1704 (96%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2859.7 0.000000e+00 1653/1705 (96%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2837.6 0.000000e+00 1646/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2826.5 0.000000e+00 1647/1705 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2795.1 0.000000e+00 1634/1694 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2782.2 0.000000e+00 1638/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2782.2 0.000000e+00 1638/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2782.2 0.000000e+00 1638/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2771.1 0.000000e+00 1636/1704 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2765.6 0.000000e+00 1635/1704 (95%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2760.0 0.000000e+00 1635/1705 (95%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2743.4 0.000000e+00 1633/1706 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2734.2 0.000000e+00 1629/1704 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2715.7 0.000000e+00 1626/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1627/1706 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1625/1705 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1625/1705 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2700.9 0.000000e+00 1624/1705 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2699.1 0.000000e+00 1625/1706 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013(H5N6) (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1624/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2689.8 0.000000e+00 1623/1705 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1623/1706 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2688.0 0.000000e+00 1621/1704 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1623/1706 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1623/1706 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1623/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%)
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Isolate detail Isolate name: A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 Isolate ID: EPI_ISL_238896 Passage details/history: Clinical Sample Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-21 Host Gallus gallus Additional host information: http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21663 Domestic status: Domestic Is vaccinated: N Location: Sweden / Skane Lan / Helsingborgs Kommun Additional location information: City of Mörarp, Lat. 56.053495 Long. 12.848939 Health status: Sick Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: National Veterinary Institute Sample ID given by the sample provider: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Submitting lab: National Veterinary Institute Sample ID given by the submitting laboratory: Authors: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 2280 EPI863854 PB1 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 2297 EPI863855 PA A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 2190 EPI863856 HA A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 1704 EPI863857 NP A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 1463 EPI863858 NA A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 1413 EPI863859 MP A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 982 EPI863860 NS A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 835 EPI863861 Submitter information Submitter: Zohari, Siamak Submission Date: 2016-11-29 Last modifier: Zohari, Siamak Last modified: 2016-11-29 Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden
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A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 EPI_ISL_238896 H5N8 Clinical Sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 EPI_ISL_238895 H5N8 Clinical sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 EPI_ISL_238894 H5N8 Clinocal Sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 EPI_ISL_238893 H5N8 Clinical sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21
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National Veterinary Institute in Sweden has released a full H5N8 sequence (at GISAID) from chicken farm in Morap.
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Isolate detail Isolate name: A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 Isolate ID: EPI_ISL_238897 Passage details/history: Clinical Sample Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-14 Host Bucephala clangula Additional host information: http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21653 Domestic status: Wild Is vaccinated: N Location: Sweden / Skane Lan / Vellinge Kommun Additional location information: Vellinge, Höllviken Health status: Sick Specimen source: Oro-pharyngeal swab Strain or commercial product name used for vaccination: Institute information Originating lab: National Veterinary Institute Sample ID given by the sample provider: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Submitting lab: National Veterinary Institute Sample ID given by the submitting laboratory: Authors: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 2280 EPI863862 PB1 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 2297 EPI863863 PA A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 2190 EPI863864 HA A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 1704 EPI863865 NP A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 1463 EPI863866 NA A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 1413 EPI863867 MP A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 982 EPI863868 NS A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 835 EPI863869 Submitter information Submitter: Zohari, Siamak Submission Date: 2016-11-29 Last modifier: Zohari, Siamak Last modified: 2016-11-29 Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden
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National Veterinary Institute in Sweden has released a full H5N8 sequence (at GISAID) from Common Goldeneye, A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016.
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Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=37.27440040955591%2C-123.2027758715821&z=6
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CDPH Weekly Update on Number of Zika Virus Infections in California November 18, 2016 The following table provides the number of travel-associated infections with Zika virus in California residents in 2015 and 2016. CDPH is following CDC testing guidelines. This table is updated every Friday. As of November 18, 2016, there have been 387 travel-associated Zika virus infections in California. • Total infections: 387 • New infections reported this week: 13 • Cumulative number of infections due to sexual transmission: 3 • Cumulative number of infections in pregnant women: 47a o Liveborn infants with birth defects: 2b o Pregnancy losses with birth defects: 0c Zika virus infections in California, 2015-2016d (as of November 18, 2016) County Travel-associated e Locally acquired f Alameda (City of Berkeley) 25g (3) 0 Contra Costa 20 0 Fresno 2 0 Humboldt 2 0 Kern 4 0 Kings 1 0 Lake 1 0 Los Angeles (City of Long Beach) 83h (6) 0 Marin 7 0 Merced 3 0 Monterey 5 0 Napa 3 0 Nevada 1 0 Orange 24 0 Riverside 11 0 Sacramento 7 0 San Bernardino 14 0 San Diego 68i 0 San Francisco 26 0 San Joaquin 7 0 San Luis Obispo 1 0 San Mateo 9 0 Santa Barbara 7 0 Santa Clara 24 0 Santa Cruz 2 0 Solano 2 0 Sonoma 9 0 Stanislaus 3 0 Tulare 5 0 Ventura 5 0 Yolo 4 0 Yuba 2 0 Total 387 0 a Local Health Departments and CDPH are monitoring all pregnant women and their infants b Includes microcephaly, calcium deposits in the brain indicating possible brain damage, excess fluid in the brain cavities and surrounding the brain, absent or poorly formed brain structures, abnormal eye development, or other problems resulting from damage to the brain that affects nerves, muscles and bones, such as clubfoot or inflexible joints. c Includes miscarriage, stillbirths, and terminations with evidence of the birth defects mentioned above d Total number includes laboratory-confirmed and probable infections as defined by the CSTE Position Statement e Persons exposed through travel to an affected area or contact with a traveler f Presumed local mosquito-borne transmission g Includes three residents of the City of Berkeley h Includes six residents of the City of Long Beach i Includes one non-resident https://www.cdph.ca.gov/HealthInfo/discond/Documents/TravelAssociatedCasesofZikaVirusinCA.pdf
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Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=41.32742779956331%2C-79.20562789960951&z=7
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Pennsylvania Blood Tests Submitted for Zika TestingInformation updated Mondays at 2 p.m. Confirmed Infections: 133* Probable Cases: 43* *DOH adopted a new definition for Zika virus infections on 9/26/2016. The case counts have increased because the Centers for Disease Control and Prevention’s new definition includes probable Zika infections. The new infection definition has been applied to all previous Zika tests in Pennsylvania. For greater detail on this new definition, click here. Last update: 11/28/2016 http://www.health.pa.gov/My Health/Diseases and Conditions/U-Z/Zikavirus/Pages/ZikaVirusHomePage.aspx#.WD4MevkrLNC
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Pennsylvania Blood Tests Submitted for Zika TestingInformation updated Mondays at 2 p.m. Confirmed Infections: 133* Probable Cases: 43* *DOH adopted a new definition for Zika virus infections on 9/26/2016. The case counts have increased because the Centers for Disease Control and Prevention’s new definition includes probable Zika infections. The new infection definition has been applied to all previous Zika tests in Pennsylvania. For greater detail on this new definition, click here. Last update: 11/28/2016 http://www.health.pa.gov/My Health/Diseases and Conditions/U-Z/Zikavirus/Pages/ZikaVirusHomePage.aspx#.WD4MevkrLNC
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week conf discard untested total weekly increase 46 60 227 445 732 23 45 58 227 424 709 37 44 58 225 389 672 19 43 57 223 373 653 29 42 54 216 354 624 22 41 47 213 342 602 16 40 46 208 332 586 25 39 42 204 315 561 23 38 42 200 296 538 55 37 41 196 246 483 32 36 40 195 216 451 12 35 40 190 209 439 13 34 38 168 220 426 25 33 34 158 209 401 16 32 29 102 254 385 18 31 24 101 242 367 23 30 22 97 225 344 24 29 21 92 207 320 23 28 21 80 196 297 41 27 21 75 160 256 62 26 18 64 112 194 13 25 13 56 112 181 17 24 11 51 102 164 27 23 6 50 81 137 19 22 6 43 69 118 23 21 6 41 48 95 7 20 5 26 57 88 7 19 5 26 50 81 9 18 5 24 43 72 14 17 5 21 32 58 8 16 4 20 26 50 6 15 4 18 22 44 11