niman

Isolate detail Isolate name: A/Iowa/32/2016 Isolate ID: EPI_ISL_238918 Passage details/history: OR Type: A / H1N2 Lineage: Sample information Collection date: 2016-11-04 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: United States / Iowa Additional location information: Patient age: Gender: Outbreak: Treatment: Specimen source: Institute information Originating lab: Iowa State Hygienic Laboratory Sample ID given by the sample provider: 449121 ORIGINAL Address: Iowa State Hygienic Laboratory UI Research Park Iowa City, 52242 United States Submitting lab: Centers for Disease Control and Prevention Sample ID given by the submitting laboratory: Authors: Address: Centers for Disease Control and Prevention WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division 1600 Clifton Road, N.E. Atlanta, GA 30333 United States Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 3000414195_299902_v1_1 2264 EPI864024 PB1 3000414195_299902_v1_2 2269 EPI864025 PA 3000414195_299902_v1_3 2151 EPI864023 HA 3000414195_299902_v1_4 1690 EPI864027 NP 3000414195_299902_v1_5 1497 EPI864020 NA 3000414195_299902_v1_6 1391 EPI864026 MP 3000414195_299902_v1_7 982 EPI864022 NS 3000414195_299902_v1_8 838 EPI864021 Submitter information Submitter: Jang, Yunho Submission Date: 2016-11-30 Last modifier: Jang, Yunho Last modified: 2016-11-30 Address: Centers for Disease Control and Prevention WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division 1600 Clifton Road, N.E. Atlanta, GA 30333 United States

Novel Influenza A Virus: One human infection with a novel influenza A virus was reported by the state of Iowa. The person was infected with an influenza A (H1N2) variant (H1N2v) virus. The patient was not hospitalized, and has fully recovered from their illness. No human-to-human transmission has been identified and the case reported close contact with swine in the week prior to illness onset. http://www.cdc.gov/flu/weekly/#S1

Descriptions Align Segment-ID Name Score E-Value Identity EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 835/835 (100%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 834/835 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 834/835 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 834/835 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1528.3 0.000000e+00 832/835 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1528.3 0.000000e+00 832/835 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 826/835 (98%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1495.1 0.000000e+00 826/835 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1484.0 0.000000e+00 824/835 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 823/836 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1461.8 0.000000e+00 821/836 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 821/836 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 821/836 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 820/836 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 819/836 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 818/836 (97%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1445.2 0.000000e+00 818/836 (97%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 818/837 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 817/836 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 817/836 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 817/836 (97%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 818/837 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1428.6 0.000000e+00 815/836 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1428.6 0.000000e+00 815/836 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 811/836 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1406.4 0.000000e+00 811/836 (97%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1406.4 0.000000e+00 811/836 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1400.9 0.000000e+00 810/836 (96%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1400.9 0.000000e+00 810/836 (96%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI363934 A/duck/Guizhou/1560/2007 (A/H6N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI299262 A/avian/Japan/8KI0185/2008 (A/H4N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI299254 A/avian/Japan/8KI0195/2008 (A/H6N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI284654 A/duck/Hunan/8-19/2009 (A/H4N2) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI268628 A/duck/Fujian/12035/2005 (A/H6N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI230017 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI461791 A/environment/Hunan/S11511/2012 (A/H4N9) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI446518 A/environment/Jiangxi/26/2009 (A/H11N9) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI420071 A/mallard/California/2578V/2011 (A/H0) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI419907 A/mallard/California/2552V/2011 (A/H4N8) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI837810 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI589175 A/duck/China/J1/2012 (A/H4N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI540193 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI508167 A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI504039 A/wild duck/SH17-1/2008 (A/H2N3) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI420126 A/mallard/California/2594V/2011 (A/H4N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI420119 A/mallard/California/2594P/2011 (A/H4N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI384049 A/duck/Thailand/CU-LM7288T/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI384039 A/duck/Thailand/CU-LM7288C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI384017 A/duck/Thailand/CU-LM7283C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383995 A/duck/Thailand/CU-LM7283T/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383983 A/duck/Thailand/CU-LM7285C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383953 A/duck/Thailand/CU-LM7280C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383937 A/duck/Thailand/CU-LM7284C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI276132 A/pintail/Akita/1364/2008 (A/H1N2) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI276127 A/pintail/Akita/1353/2008 (A/H1N2) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI760217 A/duck/Hunan/161/2015 (A/H3N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI601057 A/duck/Jiangxi/5879/2008 (A/H0) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI470632 A/duck/Jiangxi/22041/2008 (A/H4N9) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI439096 A/chicken/Taiwan/TC149/2010 (A/H4) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI419937 A/mallard/California/2555V/2011 (A/H11N9) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI419819 A/mallard/California/2533V/2011 (A/H4N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI419777 A/mallard/California/2525P/2011 (A/H4N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI418438 A/mallard/California/2525V/2011 (A/H0) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1373.2 0.000000e+00 806/837 (96%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1373.2 0.000000e+00 806/837 (96%) EPI383969 A/duck/Thailand/CU-LM7279T/2010 (A/H7N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI276122 A/pintail/Akita/1265/2008 (A/H1N2) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI276117 A/pintail/Miyagi/1472/2008 (A/H1N1) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI268476 A/mallard/Jiangxi/13228/2005 (A/H6N1) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI118253 A/migratory duck/Hong Kong/MP2553/2003 (A/H8N4) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI692476 A/duck/Henan/S4179/2009 (A/H4N6) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI600980 A/duck/Jiangxi/5916/2008 (A/H0) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI527757 A/mallard/San Jiang/275/2007 (A/H6N1) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI471877 A/duck/Guangxi/GXd-6/2010 (A/H6N8) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470648 A/duck/Jiangxi/3292/2009 (A/H7N9) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470644 A/duck/Jiangxi/9631/2009 (A/H7N8) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470642 A/duck/Jiangxi/3257/2009 (A/H7N9) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470641 A/duck/Jiangxi/3152/2009 (A/H7N9) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2697.2 0.000000e+00 1462/1463 (99%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2686.1 0.000000e+00 1460/1463 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2558.7 0.000000e+00 1437/1463 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2553.2 0.000000e+00 1436/1463 (98%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2542.1 0.000000e+00 1434/1463 (98%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2531.0 0.000000e+00 1432/1463 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2512.6 0.000000e+00 1418/1447 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2503.3 0.000000e+00 1427/1463 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2503.3 0.000000e+00 1427/1463 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2503.3 0.000000e+00 1427/1463 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2497.8 0.000000e+00 1426/1463 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2492.3 0.000000e+00 1425/1463 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2492.3 0.000000e+00 1425/1463 (97%) EPI816848 A/turkey/Poland/09/2014 (A/H9N2) segment 5 (NP) 2486.7 0.000000e+00 1416/1451 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2486.7 0.000000e+00 1425/1464 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2481.2 0.000000e+00 1424/1464 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2475.6 0.000000e+00 1422/1463 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2475.6 0.000000e+00 1423/1464 (97%) EPI816840 A/turkey/Poland/08/2014 (A/H9N2) segment 5 (NP) 2471.9 0.000000e+00 1406/1440 (97%) EPI484288 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2471.9 0.000000e+00 1404/1437 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2470.1 0.000000e+00 1422/1464 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2470.1 0.000000e+00 1422/1464 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2470.1 0.000000e+00 1421/1463 (97%) EPI463226 A/mallard/Sweden/100580/2009 (A/H6N2) segment 5 (NP) 2459.0 0.000000e+00 1419/1463 (96%) EPI463224 A/mallard/Sweden/100559/2009 (A/H6N2) segment 5 (NP) 2459.0 0.000000e+00 1419/1463 (96%) EPI463221 A/mallard/Sweden/100537/2009 (A/H6N2) segment 5 (NP) 2459.0 0.000000e+00 1419/1463 (96%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2453.5 0.000000e+00 1419/1464 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2453.5 0.000000e+00 1419/1464 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2449.8 0.000000e+00 1402/1440 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2449.8 0.000000e+00 1402/1440 (97%) EPI463229 A/mallard/Sweden/100633/2009 (A/H6N2) segment 5 (NP) 2447.9 0.000000e+00 1417/1463 (96%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2447.9 0.000000e+00 1417/1463 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2447.9 0.000000e+00 1417/1463 (96%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2442.4 0.000000e+00 1416/1463 (96%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2442.4 0.000000e+00 1416/1463 (96%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2442.4 0.000000e+00 1416/1463 (96%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2436.9 0.000000e+00 1415/1463 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2436.9 0.000000e+00 1415/1463 (96%) EPI618666 A/mallard/Sweden/2213/2003 (A/H12N5) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI332954 A/Anas_platyrhynchos/Camargue/091863/09 (A/H10N7) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI251817 A/mallard/Sweden/86/2003 (A/H12N5) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI118136 A/mallard/Italy/36/2002 (A/H5N3) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI463238 A/mallard/Sweden/101288/2009 (A/H5N3) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI433356 A/mallard/Czech Republic/15902-12K/2009 (A/H11N2) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI377571 A/mallard/Sweden/88/2005 (A/H0) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI182108 A/mallard/Netherlands/11/2007 (A/H6N5) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI102231 A/duck/Taiwan/WB29/99 (A/H6N1) segment 5 (NP) 2425.8 0.000000e+00 1414/1464 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI463241 A/mallard/Sweden/101368/2009 (A/H4N6) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI251662 A/mallard/Netherlands/2/1999 (A/H3N5) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI102229 A/chicken/Taiwan/165/99 (A/H6N1) segment 5 (NP) 2420.2 0.000000e+00 1413/1464 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2416.5 0.000000e+00 1411/1463 (96%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI618589 A/mallard/Sweden/3328/2003 (A/H12N5) segment 5 (NP) 2414.7 0.000000e+00 1412/1464 (96%) EPI618101 A/mallard/Sweden/396/2002 (A/H10N4) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513561 A/mallard/Sweden/101180/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513540 A/mallard/Sweden/100881/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513501 A/mallard/Sweden/101431/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513487 A/mallard/Sweden/101298/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513217 A/mallard/Sweden/104793/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513210 A/mallard/Sweden/104690/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513206 A/mallard/Sweden/102250/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI314216 A/wild duck/Taiwan/WB147/2001 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1412/1464 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2414.7 0.000000e+00 1412/1464 (96%) EPI69241 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI618918 A/mallard/Sweden/51933/2006 (A/H10N9) segment 5 (NP) 2409.2 0.000000e+00 1410/1463 (96%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2151/2151 (100%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2149/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2149/2151 (99%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2147/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3954.8 0.000000e+00 2146/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3951.1 0.000000e+00 2147/2152 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3703.7 0.000000e+00 2101/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3664.9 0.000000e+00 2095/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3648.3 0.000000e+00 2092/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3642.7 0.000000e+00 2091/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3642.7 0.000000e+00 2091/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3640.9 0.000000e+00 2074/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3626.1 0.000000e+00 2090/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3615.0 0.000000e+00 2087/2153 (96%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3615.0 0.000000e+00 2066/2122 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3615.0 0.000000e+00 2085/2151 (96%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3613.2 0.000000e+00 2065/2121 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3598.4 0.000000e+00 2084/2153 (96%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3598.4 0.000000e+00 2083/2152 (96%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3592.9 0.000000e+00 2082/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3592.9 0.000000e+00 2082/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3587.3 0.000000e+00 2081/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3587.3 0.000000e+00 2081/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3587.3 0.000000e+00 2081/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3587.3 0.000000e+00 2080/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3587.3 0.000000e+00 2080/2151 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3579.9 0.000000e+00 2062/2125 (97%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3574.4 0.000000e+00 2061/2126 (96%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3572.5 0.000000e+00 2046/2103 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3570.7 0.000000e+00 2078/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3570.7 0.000000e+00 2078/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3565.2 0.000000e+00 2078/2153 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3559.6 0.000000e+00 2077/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3554.1 0.000000e+00 2076/2153 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3548.5 0.000000e+00 2073/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3543.0 0.000000e+00 2072/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3543.0 0.000000e+00 2074/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3543.0 0.000000e+00 2073/2152 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3543.0 0.000000e+00 2072/2151 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3537.5 0.000000e+00 2072/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3531.9 0.000000e+00 2072/2153 (96%) EPI704543 A/duck/Mongolia/742/2015 (A/H10N7) segment 3 (PA) 3526.4 0.000000e+00 2071/2153 (96%) EPI704421 A/duck/Mongolia/655/2015 (A/H2N3) segment 3 (PA) 3526.4 0.000000e+00 2071/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3526.4 0.000000e+00 2069/2151 (96%) EPI372287 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 3 (PA) 3526.4 0.000000e+00 2069/2151 (96%) EPI823764 A/environment/Kamchatka/23/2016 (A/H13N8) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI704388 A/duck/Mongolia/482/2015 (A/H2N3) segment 3 (PA) 3520.8 0.000000e+00 2070/2153 (96%) EPI296486 A/mallard/Netherlands/28/2006 (A/H3N1) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI222163 A/mallard/Altai/1208/2007 (A/H3N6) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI222094 A/garganey/Altai/1216/2007 (A/H3N6) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI372351 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 3 (PA) 3515.3 0.000000e+00 2067/2151 (96%) EPI613953 A/mallard/Sweden/101993/2009 (A/H2N9) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI598732 A/duck/Jiangxi/32180/2013 (A/H0) segment 3 (PA) 3504.2 0.000000e+00 2066/2152 (96%) EPI598348 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 3 (PA) 3504.2 0.000000e+00 2066/2152 (96%) EPI511172 A/mallard/Sweden/52299/2006 (A/H4N6) segment 3 (PA) 3504.2 0.000000e+00 2066/2152 (96%) EPI234643 A/duck/Beijing/40/04 (A/H3N8) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI232397 A/duck/Beijing/61/05 (A/H3N8) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI181966 A/mallard/Netherlands/2/2005 (A/H4N2) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI613943 A/mallard/Sweden/4932/2004 (A/H9N2) segment 3 (PA) 3498.7 0.000000e+00 2064/2151 (95%) EPI598766 A/duck/Jiangxi/5423/2014 (A/H0) segment 3 (PA) 3498.7 0.000000e+00 2065/2152 (95%) EPI598764 A/duck/Jiangxi/34864/2013 (A/H0) segment 3 (PA) 3498.7 0.000000e+00 2065/2152 (95%) EPI591116 A/duck/Jiangxi/5418/2014 (A/H0) segment 3 (PA) 3498.7 0.000000e+00 2065/2152 (95%) EPI372327 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 3 (PA) 3498.7 0.000000e+00 2064/2151 (95%) EPI296254 A/wild duck/Korea/HDR02/2005 (A/H1N1) segment 3 (PA) 3493.1 0.000000e+00 2063/2151 (95%) EPI591120 A/duck/Jiangxi/5444/2014 (A/H7N3) segment 3 (PA) 3487.6 0.000000e+00 2063/2152 (95%) EPI511225 A/mallard/Sweden/75279/2008 (A/H4N6) segment 3 (PA) 3487.6 0.000000e+00 2063/2152 (95%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4189.3 0.000000e+00 2271/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4189.3 0.000000e+00 2271/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4185.6 0.000000e+00 2270/2274 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4180.1 0.000000e+00 2270/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4163.5 0.000000e+00 2267/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4097.0 0.000000e+00 2255/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2246/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3903.1 0.000000e+00 2220/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3875.4 0.000000e+00 2216/2275 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3869.9 0.000000e+00 2214/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3864.3 0.000000e+00 2214/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3864.3 0.000000e+00 2213/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3864.3 0.000000e+00 2213/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3858.8 0.000000e+00 2212/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3858.8 0.000000e+00 2212/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3853.2 0.000000e+00 2211/2274 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3842.2 0.000000e+00 2207/2271 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3842.2 0.000000e+00 2209/2274 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3836.6 0.000000e+00 2209/2275 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3836.6 0.000000e+00 2208/2274 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3825.5 0.000000e+00 2206/2274 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3825.5 0.000000e+00 2206/2274 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3818.1 0.000000e+00 2193/2257 (97%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3814.5 0.000000e+00 2205/2275 (96%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3808.9 0.000000e+00 2203/2274 (96%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3808.9 0.000000e+00 2204/2275 (96%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3808.9 0.000000e+00 2203/2274 (96%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3808.9 0.000000e+00 2203/2274 (96%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3803.4 0.000000e+00 2202/2274 (96%) EPI617772 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 2 (PB1) 3803.4 0.000000e+00 2202/2274 (96%) EPI602380 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI527629 A/common shelduck/Mongolia/2106/2011 (A/H3N8) segment 2 (PB1) 3803.4 0.000000e+00 2202/2274 (96%) EPI602453 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602446 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602432 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602425 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602408 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602401 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602387 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602373 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602348 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602341 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602334 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602327 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599878 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599871 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599857 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599850 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599843 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599829 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599836 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 2 (PB1) 3794.1 0.000000e+00 2201/2275 (96%) EPI602439 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 2 (PB1) 3792.3 0.000000e+00 2201/2275 (96%) EPI602394 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 2 (PB1) 3792.3 0.000000e+00 2201/2275 (96%) EPI372392 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 2 (PB1) 3792.3 0.000000e+00 2200/2274 (96%) EPI372353 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 2 (PB1) 3792.3 0.000000e+00 2201/2275 (96%) EPI599864 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 2 (PB1) 3786.8 0.000000e+00 2201/2276 (96%) EPI372400 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 2 (PB1) 3781.2 0.000000e+00 2198/2274 (96%) EPI515123 A/duck/Vietnam/LBM533/2013 (A/H3N6) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI372479 A/teal/Egypt/12908-NAMRU3/2005 (A/H10N1) segment 2 (PB1) 3775.7 0.000000e+00 2199/2276 (96%) EPI704281 A/duck/Mongolia/118/2015 (A/H4N6) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI540301 A/duck/Bangladesh/1800/2010 (A/H3N6) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI540293 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI704420 A/duck/Mongolia/655/2015 (A/H2N3) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI704386 A/duck/Mongolia/482/2015 (A/H2N3) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI693712 A/duck/Mongolia/66/2015 (A/H10N2) segment 2 (PB1) 3764.6 0.000000e+00 2198/2277 (96%) EPI692566 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI527621 A/northern shoveler/Mongolia/899V/2009 (A/H3N6) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI400164 A/chicken/Nanjing/908/2009 (A/H11N2) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI372487 A/garganey/Ukraine/05834-NAMRU3/2006 (A/H10N9) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI269009 A/duck/Hunan/491/2005 (A/H6N2) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI683152 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI683125 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 2 (PB1) 3759.1 0.000000e+00 2194/2274 (96%) EPI618509 A/mallard/Sweden/4932/2004 (A/H9N2) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI540197 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 2 (PB1) 3759.1 0.000000e+00 2194/2274 (96%) EPI401307 A/duck/Korea/DY104/2007 (A/H4N6) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI372273 A/teal/Egypt/20431-NAMRU3/2003 (A/H1N2) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI806628 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 2 (PB1) 3753.5 0.000000e+00 2195/2276 (96%) EPI704542 A/duck/Mongolia/742/2015 (A/H10N7) segment 2 (PB1) 3753.5 0.000000e+00 2193/2274 (96%) EPI704378 A/duck/Mongolia/405/2015 (A/H3N6) segment 2 (PB1) 3753.5 0.000000e+00 2193/2274 (96%) EPI704305 A/duck/Mongolia/154/2015 (A/H0N2) segment 2 (PB1) 3753.5 0.000000e+00 2196/2277 (96%) EPI618255 A/mallard/Sweden/79196/2008 (A/H0) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%) EPI600151 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%) EPI513699 A/mallard/Sweden/80014/2008 (A/H4N6) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4165.3 0.000000e+00 2271/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3947.4 0.000000e+00 2232/2280 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3919.7 0.000000e+00 2227/2280 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3897.6 0.000000e+00 2223/2280 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3880.9 0.000000e+00 2220/2280 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3875.4 0.000000e+00 2219/2280 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3847.7 0.000000e+00 2215/2281 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3842.2 0.000000e+00 2214/2281 (97%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3820.0 0.000000e+00 2210/2281 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3820.0 0.000000e+00 2210/2281 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3814.5 0.000000e+00 2208/2280 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3808.9 0.000000e+00 2207/2280 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3808.9 0.000000e+00 2207/2280 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3808.9 0.000000e+00 2208/2281 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3797.8 0.000000e+00 2207/2282 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3792.3 0.000000e+00 2205/2281 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3786.8 0.000000e+00 2204/2281 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3786.8 0.000000e+00 2204/2281 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3786.8 0.000000e+00 2204/2281 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3781.2 0.000000e+00 2202/2280 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3781.2 0.000000e+00 2203/2281 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3781.2 0.000000e+00 2203/2281 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3775.7 0.000000e+00 2201/2280 (96%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3775.7 0.000000e+00 2203/2282 (96%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3775.7 0.000000e+00 2203/2282 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3770.1 0.000000e+00 2201/2281 (96%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3764.6 0.000000e+00 2200/2281 (96%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3753.5 0.000000e+00 2199/2282 (96%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI600967 A/duck/Jiangxi/24570/2009 (A/H0) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI527565 A/ruddy shelduck/Mongolia/1189/2010 (A/H7N1) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI469175 A/northern shoveler/Hong Kong/MPL133/2010 (A/H2N9) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI222084 A/garganey/Altai/1213/2007 (A/H5N2) segment 1 (PB2) 3748.0 0.000000e+00 2198/2282 (96%) EPI527537 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 1 (PB2) 3742.4 0.000000e+00 2196/2281 (96%) EPI469224 A/duck/Jiangxi/16309/2010 (A/H7N7) segment 1 (PB2) 3742.4 0.000000e+00 2196/2281 (96%) EPI540412 A/environment/Bangladesh/1008/2010 (A/H7N9) segment 1 (PB2) 3731.4 0.000000e+00 2194/2281 (96%) EPI671741 A/lesser white-fronted goose/HuNan/412-3Y/2010 (A/H7N7) segment 1 (PB2) 3725.8 0.000000e+00 2198/2286 (96%) EPI649170 A/duck/Zhejiang/925170/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI649169 A/duck/Zhejiang/925168/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI649168 A/duck/Zhejiang/925166/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI649167 A/duck/Zhejiang/925161/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI469173 A/northern shoveler/Hong Kong/MPL961/2011 (A/H2N9) segment 1 (PB2) 3720.3 0.000000e+00 2192/2281 (96%) EPI540260 A/duck/Bangladesh/1584/2010 (A/H1N3) segment 1 (PB2) 3703.7 0.000000e+00 2189/2281 (95%) EPI513573 A/mallard/Sweden/80348/2008 (A/H0) segment 1 (PB2) 3703.7 0.000000e+00 2190/2282 (95%) EPI760218 A/duck/Hunan/7/2015 (A/H3N6) segment 1 (PB2) 3698.1 0.000000e+00 2187/2280 (95%) EPI584405 A/duck/Hunan/S4280/2009 (A/H10N8) segment 1 (PB2) 3698.1 0.000000e+00 2189/2282 (95%) EPI540196 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 1 (PB2) 3698.1 0.000000e+00 2188/2281 (95%) EPI540236 A/duck/Bangladesh/1352/2009 (A/H1N1) segment 1 (PB2) 3692.6 0.000000e+00 2188/2282 (95%) EPI372328 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 1 (PB2) 3688.9 0.000000e+00 2187/2282 (95%) EPI527558 A/velvet scoter/Mongolia/986V/2009 (A/H7N3) segment 1 (PB2) 3687.0 0.000000e+00 2187/2282 (95%) EPI513241 A/mallard/Sweden/104925/2009 (A/H4N6) segment 1 (PB2) 3687.0 0.000000e+00 2187/2282 (95%) EPI692605 A/goose/Jiangsu/S2433/2011 (A/H4N6) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI401294 A/wild duck/Korea/CSM4-28/2010 (A/H4N6) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI354433 A/chicken/Pakistan/NARC-16945/2010 (A/H3N1) segment 1 (PB2) 3681.5 0.000000e+00 2185/2281 (95%) EPI221960 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI221952 A/water/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI823912 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 1 (PB2) 3676.0 0.000000e+00 2124/2191 (96%) EPI692525 A/duck/Jiangsu/S2447/2011 (A/H4N6) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI540388 A/duck/Bangladesh/1559/2009 (A/H5N2) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI540300 A/duck/Bangladesh/1800/2010 (A/H3N6) segment 1 (PB2) 3676.0 0.000000e+00 2184/2281 (95%) EPI527577 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 1 (PB2) 3676.0 0.000000e+00 2148/2227 (96%) EPI401308 A/duck/Korea/DY104/2007 (A/H4N6) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI383926 A/duck/Thailand/CU-7518C/2010 (A/H3N8) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI221976 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI221968 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI540292 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI540252 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI513596 A/mallard/Sweden/81019/2008 (A/H4N6) segment 1 (PB2) 3670.4 0.000000e+00 2183/2281 (95%) EPI384026 A/duck/Thailand/CU-7519C/2010 (A/H3N8) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI540527 A/duck/Bangladesh/727/2011 (A/H2N4) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI527547 A/ruddy shelduck/Mongolia/598C2/2009 (A/H7N3) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI461808 A/environment/Hunan/S4350/2011 (A/H3N8) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI387519 A/snow goose/Mongolia/1-29/2008 (A/H3N8) segment 1 (PB2) 3663.0 0.000000e+00 2181/2280 (95%) EPI387520 A/snow goose/Mongolia/1-44/2008 (A/H3N8) segment 1 (PB2) 3661.2 0.000000e+00 2180/2279 (95%) EPI514962 A/mallard/Sweden/79391/2008 (A/H4N2) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513902 A/mallard/Sweden/79308/2008 (A/H4N2) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513895 A/mallard/Sweden/79230/2008 (A/H0) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513865 A/mallard/Sweden/79367/2008 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513851 A/mallard/Sweden/79332/2008 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513828 A/mallard/Sweden/79328/2008 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513826 A/mallard/Sweden/79956/2008 (A/H0) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1810.8 0.000000e+00 981/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1810.8 0.000000e+00 981/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1810.8 0.000000e+00 981/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1779.4 0.000000e+00 973/978 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1703.7 0.000000e+00 963/983 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1689.0 0.000000e+00 960/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602345 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602338 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602331 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602324 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI601720 A/duck/Jiangxi/29297/2013 (A/H0) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599882 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599875 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599868 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599861 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599854 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599847 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599840 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599833 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI704506 A/duck/Mongolia/326/2015 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 959/984 (97%) EPI704498 A/duck/Mongolia/245/2015 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 959/984 (97%) EPI704302 A/duck/Mongolia/141/2015 (A/H0N2) segment 7 (MP) 1676.0 0.000000e+00 959/984 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI306424 A/shoveler/Koymor/118/2009 (A/H3) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI316755 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 7 (MP) 1674.2 0.000000e+00 956/981 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI693701 A/duck/Mongolia/20/2015 (A/H3N8) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI685607 A/duck/Vietnam/HU1-151/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI647783 A/duck/Vietnam/HU1-148/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI647782 A/duck/Vietnam/HU1-16/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI647780 A/muscovy duck/Vietnam/HU1-399/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513559 A/mallard/Sweden/101180/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513552 A/mallard/Sweden/101081/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513538 A/mallard/Sweden/100881/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513499 A/mallard/Sweden/101431/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513485 A/mallard/Sweden/101298/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI377995 A/common teal/Netherlands/2/2008 (A/H2N3) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI372437 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 7 (MP) 1665.0 0.000000e+00 957/984 (97%) EPI372413 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI372405 A/shoveler/Egypt/00215-NAMRU3/2007 (A/H7N9) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI372397 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI231188 A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI181962 A/mallard/Netherlands/2/2005 (A/H4N2) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI220565 A/mallard/Czech Republic/15307-17/2008 (A/H0) segment 7 (MP) 1663.1 0.000000e+00 955/982 (97%) EPI619097 A/mallard/Sweden/68537/2007 (A/H0) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI618547 A/mallard/Sweden/58705/2006 (A/H5N2) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI618488 A/mallard/Sweden/101589/2009 (A/H11N9) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI559668 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI544354 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1406/1406 (100%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1405/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1405/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1405/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2588.3 0.000000e+00 1404/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2562.4 0.000000e+00 1399/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1395/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1392/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2483.0 0.000000e+00 1386/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2455.3 0.000000e+00 1381/1407 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2449.8 0.000000e+00 1380/1407 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2427.6 0.000000e+00 1376/1407 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2405.5 0.000000e+00 1372/1407 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2399.9 0.000000e+00 1371/1407 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1370/1407 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1370/1407 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1371/1408 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1370/1407 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1369/1407 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1369/1407 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1370/1408 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2383.3 0.000000e+00 1368/1407 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1367/1407 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1367/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1367/1407 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1368/1408 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2372.2 0.000000e+00 1366/1407 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2372.2 0.000000e+00 1367/1408 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2370.4 0.000000e+00 1347/1379 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2366.7 0.000000e+00 1365/1407 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2361.1 0.000000e+00 1365/1408 (96%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2361.1 0.000000e+00 1364/1407 (96%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2361.1 0.000000e+00 1364/1407 (96%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2355.6 0.000000e+00 1363/1407 (96%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2333.4 0.000000e+00 1354/1399 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2316.8 0.000000e+00 1356/1407 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2316.8 0.000000e+00 1349/1396 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1356/1408 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI552748 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI548487 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI544759 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2300.2 0.000000e+00 1353/1407 (96%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3122.0 0.000000e+00 1699/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1687/1705 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1602/1609 (99%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1656/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1654/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2867.1 0.000000e+00 1652/1702 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2859.7 0.000000e+00 1652/1704 (96%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2859.7 0.000000e+00 1652/1704 (96%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2854.2 0.000000e+00 1652/1705 (96%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1650/1705 (96%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2821.0 0.000000e+00 1643/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2804.3 0.000000e+00 1642/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2804.3 0.000000e+00 1642/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2789.6 0.000000e+00 1632/1693 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2787.7 0.000000e+00 1639/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2776.6 0.000000e+00 1637/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2776.6 0.000000e+00 1637/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2776.6 0.000000e+00 1637/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2765.6 0.000000e+00 1635/1704 (95%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2760.0 0.000000e+00 1634/1704 (95%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2754.5 0.000000e+00 1634/1705 (95%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2732.3 0.000000e+00 1631/1706 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2728.6 0.000000e+00 1628/1704 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2710.2 0.000000e+00 1625/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1626/1706 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2704.6 0.000000e+00 1626/1706 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2695.4 0.000000e+00 1623/1705 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1623/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2684.3 0.000000e+00 1622/1705 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1621/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2682.5 0.000000e+00 1620/1704 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1621/1705 (95%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1621/1705 (95%)

Isolate detail Isolate name: A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 Isolate ID: EPI_ISL_238896 Passage details/history: Clinical Sample Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-21 Host Gallus gallus Additional host information: http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21663 Domestic status: Domestic Is vaccinated: N Location: Sweden / Skane Lan / Helsingborgs Kommun Additional location information: City of Mörarp, Lat. 56.053495 Long. 12.848939 Health status: Sick Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: National Veterinary Institute Sample ID given by the sample provider: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Submitting lab: National Veterinary Institute Sample ID given by the submitting laboratory: Authors: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 2280 EPI863854 PB1 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 2297 EPI863855 PA A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 2190 EPI863856 HA A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 1704 EPI863857 NP A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 1463 EPI863858 NA A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 1413 EPI863859 MP A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 982 EPI863860 NS A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 835 EPI863861 Submitter information Submitter: Zohari, Siamak Submission Date: 2016-11-29 Last modifier: Zohari, Siamak Last modified: 2016-11-29 Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden

A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 EPI_ISL_238896 H5N8 Clinical Sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 EPI_ISL_238895 H5N8 Clinical sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 EPI_ISL_238894 H5N8 Clinocal Sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 EPI_ISL_238893 H5N8 Clinical sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21

National Veterinary Institute has released (at GISAID) full H5N8 sequences from chicken farm in Morap. Sweden.

Highly pathogenic avian influenza, Ukraine Information received on 30/11/2016 from Dr Olga Shevchenko, Head of Directorate fot International Cooperation, Directorate fot International Cooperation, State Service of Ukraine on Food Safety and Consumer Protection, Kiev, Ukraine Summary Report type Immediate notification Date of start of the event 14/11/2016 Date of confirmation of the event 30/11/2016 Report date 30/11/2016 Date submitted to OIE 30/11/2016 Reason for notification Reoccurrence of a listed disease Date of previous occurrence 24/07/2006 Manifestation of disease Clinical disease Causal agent Highly pathogenic avian influenza virus Serotype H5 Nature of diagnosis Clinical, Laboratory (basic) This event pertains to a defined zone within the country New outbreaks (1) Outbreak 1 Novooleksandrivka, Kalanchatskiy, KHERSON Date of start of the outbreak 14/11/2016 Outbreak status Continuing (or date resolved not provided) Epidemiological unit Village Affected animals Species Susceptible Cases Deaths Destroyed Slaughtered Birds 2500 410 410 0 Affected population The first clinical signs of the disease appeared about two weeks ago in a backyard holding in the village Novooleksandrivka. After two weeks the veterinary service was informed on the increase of the mortality of birds in the village. Samples were taken from the dead birds and a positive result was found for highly pathogenic avian influenza. As a preliminary data there are 2500 birds in the outbreak zone. A stamping-out is ongoing. Summary of outbreaks Total outbreaks: 1 Total animals affected Species Susceptible Cases Deaths Destroyed Slaughtered Birds 2500 410 410 0 Outbreak statistics Species Apparent morbidity rate Apparent mortality rate Apparent case fatality rate Proportion susceptible animals lost* Birds 16.40% 16.40% 100.00% ** *Removed from the susceptible population through death, destruction and/or slaughter **Not calculated because of missing information Epidemiology Source of the outbreak(s) or origin of infection Unknown or inconclusive Control measures Measures applied Movement control inside the country Disinfection / Disinfestation Dipping / Spraying Quarantine Surveillance outside containment and/or protection zone Stamping out Official destruction of animal products Official disposal of carcasses, by-products and waste Surveillance within containment and/or protection zone Control of wildlife reservoirs Zoning Vaccination prohibited No treatment of affected animals Measures to be applied No other measures Diagnostic test results Laboratory name and type Species Test Test date Result State Scientific and Research Institute of Laboratory Diagnosis and Veterinary and Sanitary Expertise (National laboratory) Birds polymerase chain reaction (PCR) 30/11/2016 Positive Future Reporting The event is continuing. Weekly follow-up reports will be submitted. Map of outbreak locations http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21731

Highly pathogenic avian influenza, Egypt Information received on 30/11/2016 from Dr Ibrahim Mahrous Saleh Mohamed, Chairman, General Organization for Veterinary Services (GOVS), Ministry of Agriculture and Land Reclamation, Cairo, Egypt Summary Report type Immediate notification Date of start of the event 24/11/2016 Date of confirmation of the event 26/11/2016 Report date 30/11/2016 Date submitted to OIE 30/11/2016 Reason for notification New strain of a listed disease in the country Causal agent Highly pathogenic avian influenza virus Serotype H5N8 Nature of diagnosis Laboratory (basic), Laboratory (advanced) This event pertains to a defined zone within the country New outbreaks (1) Outbreak 1 Dumyat, Dumyat, DUMYAT Date of start of the outbreak 24/11/2016 Outbreak status Resolved (24/11/2016) Epidemiological unit Village Affected animals Species Susceptible Cases Deaths Destroyed Slaughtered Common Coot:Fulica atra(Rallidae) 2 2 0 0 Affected population Two common coots found dead during routine epidemiological surveillance activity Summary of outbreaks Total outbreaks: 1 Total animals affected Species Susceptible Cases Deaths Destroyed Slaughtered Common Coot:Fulica atra(Rallidae) 2 2 0 0 Outbreak statistics Species Apparent morbidity rate Apparent mortality rate Apparent case fatality rate Proportion susceptible animals lost* Common Coot:Fulica atra(Rallidae) ** ** 100.00% ** *Removed from the susceptible population through death, destruction and/or slaughter **Not calculated because of missing information Epidemiology Source of the outbreak(s) or origin of infection Unknown or inconclusive Control measures Measures applied Disinfection / Disinfestation Surveillance outside containment and/or protection zone Surveillance within containment and/or protection zone Vaccination permitted (if a vaccine exists) No treatment of affected animals Measures to be applied No other measures Diagnostic test results Laboratory name and type Species Test Test date Result Animal Health Research Center (AHRI), Reference Laboratory for Veterinary Quality Control on Poultry Production (National laboratory) Common Coot real-time PCR 26/11/2016 Positive Future Reporting The event is continuing. Weekly follow-up reports will be submitted. Map of outbreak locations http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21730

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1aNOepBDPUd0zdRnQE1UbSW8djsk&ll=43.262986219357245%2C26.96437930736238&z=7

Highly pathogenic avian influenza, Romania Information received on 29/11/2016 from Dr. Marius Grigore, Director, Head of Unit Animal Health Department General Sanitary Veterinary Directorate, National Sanitary Veterinary and Food Safety Authority, Bucharest, Romania Summary Report typeImmediate notification Date of start of the event23/11/2016 Date of confirmation of the event24/11/2016 Report date29/11/2016 Date submitted to OIE29/11/2016 Reason for notificationNew strain of a listed disease in the country Causal agentHighly pathogenic avian influenza virus SerotypeH5N8 Nature of diagnosisLaboratory (advanced) This event pertains toa defined zone within the country New outbreaks (1) Outbreak 1Constanta harbour, Constanta, CONSTANTA Date of start of the outbreak23/11/2016 Outbreak statusContinuing (or date resolved not provided) Epidemiological unitNot applicable Affected animals SpeciesSusceptibleCasesDeathsDestroyedSlaughtered Mute Swan:Cygnus olor(Anatidae)1100 Summary of outbreaksTotal outbreaks: 1 Total animals affected SpeciesSusceptibleCasesDeathsDestroyedSlaughtered Mute Swan:Cygnus olor(Anatidae)1100 Outbreak statistics SpeciesApparent morbidity rateApparent mortality rateApparent case fatality rateProportion susceptible animals lost* Mute Swan:Cygnus olor(Anatidae)****100.00% http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21709

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Immediate notification report Report reference: REF OIE 21731, Report Date: 30/11/2016, Country : Ukraine Report Summary Name of sender of the report Dr Olga Shevchenko Telephone +380 44 278 84 92 Position Head of Directorate fot International Cooperation Fax +380 44 279 48 83 Address 1, B. Hrinchenko Street 01001 Kiev Kiev 01001 Email [email protected] Date submitted to OIE 30/11/2016 Animal type Terrestrial Date of report 30/11/2016 Disease Highly pathogenic avian influenza Date of start of the event 14/11/2016 Causal Agent Highly pathogenic avian influenza virus Date of confirmation of the event 30/11/2016 Serotype(s) H5 Date of last occurrence 24/07/2006 Reason Reoccurrence of a listed disease Diagnosis Clinical, Laboratory (basic) Country or zone a zone or compartment Clinical signs Yes Number of reported outbreaks submitted= 1, Draft= 0 Outbreak details Province Number of outbreaks District Sub-district Unit Type Location Latitude Longitude Start Date End Date: KHERSON- (this report - submitted) - Kalanchatskiy Village Novooleksandrivka 46.263033 33.419214 14/11/2016 Species Measuring units Susceptible Cases Deaths Destroyed Slaughtered Birds Animals 2500 410 410 ... 0 Affected Population The first clinical signs of the disease appeared about two weeks ago in a backyard holding in the village Novooleksandrivka. After two weeks the veterinary service was informed on the increase of the mortality of birds in the village. Samples were taken from the dead birds and a positive result was found for highly pathogenic avian influenza. As a preliminary data there are 2500 birds in the outbreak zone. A stamping-out is ongoing. Outbreak summary: Total outbreaks = 1 (Submitted) Species Susceptible Cases Deaths Destroyed Slaughtered Birds 2500 410 410 0 Epidemiology Epidemiological comments Source of the outbreak(s) or origin of infection • Unknown or inconclusive http://www.oie.int/wahis_2/temp/reports/en_imm_0000021731_20161130_173324.pdf

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Immediate notification report Report reference: REF OIE 21730, Report Date: 30/11/2016, Country : Egypt Report Summary Name of sender of the report Dr Ibrahim Mahrous Saleh Mohamed Telephone +20-2-3760 8867 Position Chairman Fax +20 2 3336 1727 Address 1st Nadi Al Said Street Dokki, Giza 12618 - Cairo Cairo Email [email protected] Date submitted to OIE 30/11/2016 Animal type Terrestrial Date of report 30/11/2016 Disease Highly pathogenic avian influenza Date of start of the event 24/11/2016 Causal Agent Highly pathogenic avian influenza virus Date of confirmation of the event 26/11/2016 Serotype(s) H5N8 Diagnosis Laboratory (basic), Laboratory (advanced) Reason New strain of a listed disease in the country Clinical signs Yes Country or zone a zone or compartment Number of reported outbreaks submitted= 1, Draft= 0 Outbreak details Muhafazah Number of outbreaks District Sub-district Unit Type Location Latitude Longitude Start Date End Date: DUMYAT- (this report - submitted) - Dumyat Village Dumyat 31.458629 31.82434 24/11/2016 24/11/2016 Species Measuring units Susceptible Cases Deaths Destroyed Slaughtered Common Coot:Rallidae(Fulica atra) Animals ... 2 2 0 0 Affected Population Two common coots found dead during routine epidemiological surveillance activity http://www.oie.int/wahis_2/temp/reports/en_imm_0000021730_20161130_175319.pdf

Descriptions Align Segment-ID Name Score E-Value Identity EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 812/812 (100%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 806/812 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 803/812 (98%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 802/812 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 800/812 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 799/813 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1421.2 0.000000e+00 797/813 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 797/813 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 797/813 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 796/813 (97%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 795/813 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 794/813 (97%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1404.6 0.000000e+00 794/813 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 794/814 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 794/814 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 792/813 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 792/813 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 792/813 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1388.0 0.000000e+00 791/813 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1388.0 0.000000e+00 791/813 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1365.8 0.000000e+00 787/813 (96%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1360.3 0.000000e+00 786/813 (96%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1360.3 0.000000e+00 786/813 (96%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1354.7 0.000000e+00 785/813 (96%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1354.7 0.000000e+00 785/813 (96%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI363934 A/duck/Guizhou/1560/2007 (A/H6N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI299262 A/avian/Japan/8KI0185/2008 (A/H4N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI299254 A/avian/Japan/8KI0195/2008 (A/H6N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI284654 A/duck/Hunan/8-19/2009 (A/H4N2) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI268628 A/duck/Fujian/12035/2005 (A/H6N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI230017 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI262750 A/aquatic bird/Korea/w209/2007 (A/H5N3) segment 8 (NS) 1336.2 0.000000e+00 781/812 (96%) EPI461791 A/environment/Hunan/S11511/2012 (A/H4N9) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI446518 A/environment/Jiangxi/26/2009 (A/H11N9) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI420071 A/mallard/California/2578V/2011 (A/H0) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI419907 A/mallard/California/2552V/2011 (A/H4N8) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI314207 A/wild duck/Taiwan/WB1364/2007 (A/H4N6) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI837810 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI589175 A/duck/China/J1/2012 (A/H4N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI540193 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI508167 A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI504039 A/wild duck/SH17-1/2008 (A/H2N3) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI420126 A/mallard/California/2594V/2011 (A/H4N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI420119 A/mallard/California/2594P/2011 (A/H4N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI384049 A/duck/Thailand/CU-LM7288T/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI384039 A/duck/Thailand/CU-LM7288C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI384017 A/duck/Thailand/CU-LM7283C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383995 A/duck/Thailand/CU-LM7283T/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383983 A/duck/Thailand/CU-LM7285C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383953 A/duck/Thailand/CU-LM7280C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383937 A/duck/Thailand/CU-LM7284C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI276132 A/pintail/Akita/1364/2008 (A/H1N2) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI276127 A/pintail/Akita/1353/2008 (A/H1N2) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI760217 A/duck/Hunan/161/2015 (A/H3N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI470632 A/duck/Jiangxi/22041/2008 (A/H4N9) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI439096 A/chicken/Taiwan/TC149/2010 (A/H4) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI419937 A/mallard/California/2555V/2011 (A/H11N9) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI419819 A/mallard/California/2533V/2011 (A/H4N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI419777 A/mallard/California/2525P/2011 (A/H4N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI418438 A/mallard/California/2525V/2011 (A/H0) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1321.5 0.000000e+00 780/814 (95%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1321.5 0.000000e+00 780/814 (95%) EPI389736 A/duck/Eastern China/318/2003 (A/H11) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI383969 A/duck/Thailand/CU-LM7279T/2010 (A/H7N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI296191 A/wild duck/Korea/YS44/2004 (A/H1N2) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI276122 A/pintail/Akita/1265/2008 (A/H1N2) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI276117 A/pintail/Miyagi/1472/2008 (A/H1N1) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI268476 A/mallard/Jiangxi/13228/2005 (A/H6N1) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI256790 A/muscovy duck/Thailand/CU-LM4761/2009 (A/H10N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI256782 A/muscovy duck/Thailand/CU-LM4759/2009 (A/H10N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI256774 A/muscovy duck/Thailand/CU-LM4754/2009 (A/H10N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI182408 A/duck/Primorie/2633/01 (A/H5N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI170823 A/duck/Primorie/2633/01 (A/H5N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI127084 A/aquatic bird/Korea/CN-1/2004 (A/H3N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%)