niman

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI709584A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 4 (HA)3109.00.000000e+001683/1683 (100%)EPI709576A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 4 (HA)3092.40.000000e+001680/1683 (99%)EPI645556A/blue-winged teal/Iowa/13OS2316/2013 (A/H7N3) segment 4 (HA)2942.80.000000e+001653/1683 (98%)EPI594839A/mallard/Maryland/13OS3019/2014 (A/H0) segment 4 (HA)2915.10.000000e+001648/1683 (97%)EPI526172A/blue-winged teal/Ohio/13OS2037/2013 (A/H7N1) segment 4 (HA)2909.60.000000e+001647/1683 (97%)EPI419496A/American green-winged teal/Mississippi/11OS247/2011 (A/H0) segment 4 (HA)2826.50.000000e+001632/1683 (96%)EPI413380A/mallard/Missouri/10MO0551/2010 (A/H7N7) segment 4 (HA)2804.30.000000e+001628/1683 (96%)EPI689616A/blue winged teal/Minnesota/A00137660/2009 (A/H7N3) segment 4 (HA)2798.80.000000e+001627/1683 (96%)EPI419540A/American green-winged teal/Mississippi/11OS259/2011 (A/H0) segment 4 (HA)2798.80.000000e+001627/1683 (96%)EPI419497A/American green-winged teal/Mississippi/11OS250/2011 (A/H7N3) segment 4 (HA)2798.80.000000e+001627/1683 (96%)EPI419085A/American black duck/Wisconsin/10OS3949/2010 (A/H7N8) segment 4 (HA)2798.80.000000e+001627/1683 (96%)EPI418762A/American green-winged teal/Illinois/10OS3368/2010 (A/H7N7) segment 4 (HA)2798.80.000000e+001627/1683 (96%)EPI418759A/American green-winged teal/Illinois/10OS3329/2010 (A/H7N7) segment 4 (HA)2798.80.000000e+001627/1683 (96%)EPI616891A/mallard/Alberta/590/2010 (A/H7N8) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI418597A/northern shoveler/Arkansas/11OS333/2011 (A/H0) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI419446A/northern shoverl/Mississippi/11OS145/2011 (A/H7N9) segment 4 (HA)2787.70.000000e+001625/1683 (96%)EPI419234A/northern shoveler/Missouri/10OS4750/2010 (A/H7N3) segment 4 (HA)2787.70.000000e+001625/1683 (96%)EPI419498A/American green-winged teal/Mississippi/11OS255/2011 (A/H7N7) segment 4 (HA)2782.20.000000e+001624/1683 (96%)EPI418570A/northern shoveler/Arkansas/11OS171/2011 (A/H0) segment 4 (HA)2782.20.000000e+001624/1683 (96%)EPI419184A/northern shoveler/Missouri/10OS4700/2010 (A/H0) segment 4 (HA)2776.60.000000e+001623/1683 (96%)EPI419181A/northern shoveler/Missouri/10OS4632/2010 (A/H7N7) segment 4 (HA)2776.60.000000e+001623/1683 (96%)EPI616787A/blue-winged teal/Texas/AI12-909/2012 (A/H7N1) segment 4 (HA)2771.10.000000e+001622/1683 (96%)EPI419703A/American wigeon/Missouri/10MO0530/2010 (A/H0) segment 4 (HA)2771.10.000000e+001622/1683 (96%)EPI419542A/northern shoveler/Mississippi/11OS202/2011 (A/H7N7) segment 4 (HA)2771.10.000000e+001623/1684 (96%)EPI419233A/gadwall/Missouri/10OS4731/2010 (A/H7N3) segment 4 (HA)2771.10.000000e+001622/1683 (96%)EPI689523A/American green winged teal/Mississippi/A00630203/2009 (A/H7N6) segment 4 (HA)2765.60.000000e+001621/1683 (96%)EPI419543A/northern shoveler/Mississippi/11OS289/2011 (A/H7N3) segment 4 (HA)2765.60.000000e+001621/1683 (96%)EPI299451A/northern shoveler/Mississippi/09OS643/2009 (A/H7N7) segment 4 (HA)2765.60.000000e+001621/1683 (96%)EPI690006A/northern shoveler/Mississippi/A00602284/2009 (A/H0) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI690005A/northern shoveler/Louisiana/A00557321/2009 (A/H7N3) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI689614A/blue winged teal/Louisiana/A00557206/2009 (A/H7N7) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI512246A/northern shoveler/Mississippi/12OS231/2012 (A/H0) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI487352A/guinea fowl/Nebraska/17096/2011 (A/H7N9) segment 4 (HA)2760.00.000000e+001621/1684 (96%)EPI487328A/goose/Nebraska/17097/2011 (A/H7N9) segment 4 (HA)2760.00.000000e+001621/1684 (96%)EPI399915A/goose/Nebraska/17097-4/2011 (A/H7N9) segment 4 (HA)2760.00.000000e+001621/1684 (96%)EPI299347A/American green-winged teal/Mississippi/09OS046/2009 (A/H7N7) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI690008A/northern shoveler/Mississippi/A00682947/2008 (A/H7N7) segment 4 (HA)2754.50.000000e+001619/1683 (96%)EPI689690A/bufflehead/Virginia/A00120022/2008 (A/H7N2) segment 4 (HA)2754.50.000000e+001619/1683 (96%)EPI399917A/guinea fowl/Nebraska/17096-1/2011 (A/H7N9) segment 4 (HA)2754.50.000000e+001620/1684 (96%)EPI689774A/mallard/New Jersey/A00122457/2008 (A/H7N8) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI616857A/blue-winged teal/Louisiana/AI11-2911/2011 (A/H7N3) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI616845A/blue-winged teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI512215A/northern pintail/Mississippi/12OS420/2012 (A/H0) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI512201A/American green-winged teal/Mississippi/12OS397/2012 (A/H7N7) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI449900A/blue-winged Teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI418798A/American green-winged teal/Illinois/10OS4014/2010 (A/H7N3) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI585179A/redhead/Ohio/13OS0406/2013 (A/H7N3) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI512431A/northern shoveler/Illinois/11OS4404/2011 (A/H7N3) segment 4 (HA)2743.40.000000e+001618/1684 (96%)EPI512194A/northern shoveler/Mississippi/12OS362/2012 (A/H7N7) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI512180A/northern shoveler/Mississippi/12OS347/2012 (A/H7N7) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI487317A/turkey/Minnesota/32710/2011 (A/H7N9) segment 4 (HA)2743.40.000000e+001618/1684 (96%)EPI487309A/turkey/Minnesota/31900/2011 (A/H7N9) segment 4 (HA)2743.40.000000e+001618/1684 (96%)EPI689773A/mallard/Nebraska/A00709657/2009 (A/H7N3) segment 4 (HA)2737.90.000000e+001617/1684 (96%)EPI689619A/blue winged teal/South Dakota/A00772794/2009 (A/H7N7) segment 4 (HA)2737.90.000000e+001616/1683 (96%)EPI512299A/northern shoveler/Arkansas/12OS158/2012 (A/H7N1) segment 4 (HA)2737.90.000000e+001616/1683 (96%)EPI569396A/blue-winged teal/LA/AI11-2911/2011 (A/H7N3) segment 4 (HA)2736.00.000000e+001610/1675 (96%)EPI689831A/mallard/New Jersey/A00926089/2010 (A/H7N3) segment 4 (HA)2732.30.000000e+001615/1683 (95%)EPI616382A/northern shoveler/Illinois/12OS4951/2012 (A/H7N3) segment 4 (HA)2732.30.000000e+001615/1683 (95%)EPI463745A/mallard/Minnesota/AI09-1714/2009 (A/H7N1) segment 4 (HA)2728.60.000000e+001614/1683 (95%)EPI689769A/mallard/Iowa/A00558620/2008 (A/H7N3) segment 4 (HA)2726.80.000000e+001615/1684 (95%)EPI689688A/blue winged teal/Texas/A00605473/2009 (A/H7N3) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI689550A/American green winged teal/Texas/A00604814/2009 (A/H7N3) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI689549A/American green winged teal/Texas/A00604032/2009 (A/H7N3) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI689546A/American green winged teal/Texas/A00604024/2009 (A/H7N3) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI434477A/mallard/Nova Scotia/00372/2010 (A/H7N7) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI434430A/American black duck/New Brunswick/00344/2010 (A/H7N7) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI418896A/common goldeneye/Wisconsin/10OS4202/2010 (A/H7N6) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI689707A/blue winged teal/Texas/A00676566/2009 (A/H7N3) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI689522A/American green winged teal/Mississippi/A00468514/2009 (A/H7N7) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI526461A/American green-winged teal/Wisconsin/13OS3468/2013 (A/H7N3) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI434481A/green-winged teal/New Brunswick/00392/2010 (A/H7N7) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI689547A/American green winged teal/Texas/A00604029/2009 (A/H7N3) segment 4 (HA)2715.70.000000e+001612/1683 (95%)EPI616037A/northern shoveler/Ohio/12OS5539/2012 (A/H7N3) segment 4 (HA)2704.60.000000e+001610/1683 (95%)EPI616030A/American green-winged teal/Ohio/12OS5538/2012 (A/H7N3) segment 4 (HA)2699.10.000000e+001609/1683 (95%)EPI645360A/American green-winged teal/Ohio/13OS1769/2013 (A/H7N2) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI645353A/blue-winged teal/Ohio/13OS1770/2013 (A/H7N3) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI526457A/blue-winged teal/Ohio/13OS1773/2013 (A/H7N3) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI526270A/American green-winged teal/Ohio/13OS1777/2013 (A/H7N3) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI487934A/turkey/Minnesota/20400/2009 (A/H7N9) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI487926A/turkey/Minnesota/18421/2009 (A/H7N9) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI487918A/turkey/Minnesota/15591/2009 (A/H7N9) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI487295A/turkey/Minnesota/14135-2/2009 (A/H7N9) segment 4 (HA)2688.00.000000e+001608/1684 (95%)EPI333728A/mallard/Missouri/220/2009 (A/H7N3) segment 4 (HA)2688.00.000000e+001607/1683 (95%)EPI690004A/northern pintail/Texas/A00466052/2009 (A/H7N3) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI689871A/mallard/Oklahoma/A00744383/2009 (A/H7N3) segment 4 (HA)2682.50.000000e+001606/1683 (95%)EPI689771A/mallard/Michigan/A00869519/2009 (A/H7N3) segment 4 (HA)2682.50.000000e+001606/1683 (95%)EPI689739A/mallard/Illinois/A00325439/2009 (A/H7N3) segment 4 (HA)2682.50.000000e+001606/1683 (95%)EPI414400A/northern pintail/Interior Alaska/10BM02539R0/2010 (A/H7N3) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI690010A/northern shoveler/Oklahoma/A00744384/2009 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI689838A/mallard/Oklahoma/A00749161/2009 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI689767A/mallard/Illinois/A00755320/2009 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI616996A/mallard/Alberta/192/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001606/1684 (95%)EPI616983A/mallard/Alberta/167/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001606/1684 (95%)EPI487910A/turkey/Minnesota/14659/2009 (A/H7N9) segment 4 (HA)2676.90.000000e+001606/1684 (95%)EPI487303A/turkey/Minnesota/31676/2009 (A/H7N9) segment 4 (HA)2676.90.000000e+001607/1685 (95%)EPI451949A/northern pintail/Interior Alaska/10BM11038R0/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI451921A/northern pintail/Interior Alaska/10BM11366R0/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI451788A/northern pintail/Interior Alaska/10BM09481R0/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI451760A/mallard/Interior Alaska/10BM09539R0/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI451753A/mallard/Interior Alaska/10BM09528R0/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)

Isolate detailIsolate name: A/turkey/Indiana/16-001574-7/2016 Isolate ID: EPI_ISL_211728 Passage details/history: Type: A / H7N8 Lineage: Sample information Collection date: 2016-01 (Day unknown) Host Turkey Additional host information: Domestic status: Is vaccinated: Location: United States Additional location information: Health status: Specimen source: Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Other Database Import Sample ID given by the submitting laboratory: Authors: Killian,M.L.; Hines,N.L.; Torchetti,M. Address: PublicationPublication In vivo antiviral resistance PhenotypeGenotypeUnspecifiedAntiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional informationAntigenic characterization: Note: NVSL 16-001574-7; EP1; LPAI Sequence segmentidentifierlengthaccession #INSDCSequence PB2 A/turkey/Indiana/16-001574-7/2016 2287 EPI709581 KU585913 PB1 A/turkey/Indiana/16-001574-7/2016 2290 EPI709582 KU585914 PA A/turkey/Indiana/16-001574-7/2016 2182 EPI709583 KU585915 HA A/turkey/Indiana/16-001574-7/2016 1696 EPI709584 KU585916 NP A/turkey/Indiana/16-001574-7/2016 1524 EPI709585 KU585917 NA A/turkey/Indiana/16-001574-7/2016 1419 EPI709586 KU585918 MP A/turkey/Indiana/16-001574-7/2016 987 EPI709587 KU585919 NS A/turkey/Indiana/16-001574-7/2016 850 EPI709588 KU585920 Submitter information Submitter: , EpiFluDB Submission Date: 2016-01-25 Last modifier: Pohlmann, Anne (EpiFlu Data Curator) Last modified: 2016-02-10

Audio file http://terrance.who.int/mediacentre/presser/WHO-RUSH_Zika_research_presser_KIENYm_UNOG_12FEB2016.mp3

Map update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=zv94AJqgUct4.kT4qLMXp3SLU

The current case count in New York State is 16 confirmed infections. http://www.putnamcountyny.com/first-case-of-zika-virus-is-confirmed-in-putnam-county/

Map update https://www.google.com/maps/d/u/0/edit?mid=zv94AJqgUct4.kT4qLMXp3SLU&hl=en

First Case of Zika Virus Is Confirmed in Putnam County February 11, 2016/in Featured, General News, Health & Safety, Putnam is PreparedBREWSTER, NY—One Putnam County resident has been confirmed positive for Zika virus and a second additional case is being tested, announced the Putnam County Department of Health today. Both residents had recently travelled out of the country. The current case count in New York State is 16 confirmed infections. “We are working with our local physicians and the New York State Department of Health to monitor and test residents with recent travel to a Zika-affected area,” said Michael J. Nesheiwat, M.D., Interim Commissioner of Health. “Symptoms of Zika infection are usually mild. Male travelers without symptoms do not require testing. However, all pregnant women—with or without symptoms—who have travelled to a Zika-affected region should be tested, because of a link to microcephaly or other birth defects.” Zika virus, which is spread by infected mosquitos, has been appearing around the continental United States, mostly in travelers who have visited a Zika-affected area. One lone case in Texas is being investigated in a sexual partner of a traveler from one of the affected areas. The situation regarding Zika virus has been changing as new information develops. The Centers for Disease Control have set up a dedicated website at cdc.gov/zika and the New York State Department of Health has established a Zika Information Line: 1-888-364-4723. Testing is currently not available through commercial laboratories. Residents who have travelled to an area with Zika infection should contact their personal healthcare provider who will work with the Putnam County Department of Health (PCDOH) to facilitate the proper testing procedure through the NYSDOH laboratory at Wadsworth Center. Wadsworth is one of only three state laboratories in the country equipped to perform the screening and confirmatory tests of Zika antibodies and other related viruses. To date local transmission of Zika infection has been identified in 30 countries and territories, including Puerto Rico, the U.S. Virgin Islands and the Caribbean. Further spread in the region may occur. Prior to 2015, outbreaks of the virus had occurred only in areas of Africa, Southeast Asia and the Pacific Islands. Last May the first confirmed cases were reported in Brazil. The Health Department’s mission is to improve and protect the health of the Putnam County community, composed of nearly 100,000 residents. Core services include community health assessment, disease surveillance and control, emergency preparedness, environmental health protection, family health promotion and health education. For more information, please visit the PCDOH website at www.putnamcountyny.com/health or visit the social media sites on Facebook at www.facebook.com/putnamhealth, www.facebook.com/RunWalkPutnam,www.instagram.com/PutnamHealthNY and Twitter @PutnamHealthNY.

One Putnam County resident has been confirmed positive for Zika virus and a second additional case is being tested, announced the Putnam County Department of Health today. Both residents had recently travelled out of the country. The current case count in New York State is 16 confirmed infections. http://www.putnamcountyny.com/first-case-of-zika-virus-is-confirmed-in-putnam-county/

LOCUS KU585916 1696 bp cRNA linear VRL 10-FEB-2016 DEFINITION Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KU585916 VERSION KU585916.1 GI:985701767 KEYWORDS . SOURCE Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8)) ORGANISM Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1696) AUTHORS Killian,M.L., Hines,N.L. and Torchetti,M. TITLE Direct Submission JOURNAL Submitted (25-JAN-2016) Diagnostic Virology Laboratory, National Veterinary Services Laboratories (NVSL), USDA APHIS VS, 1920 Dayton Avenue, Ames, IA 50010, USA COMMENT GenBank Accession Numbers KU585913-KU585920 represent sequences from the 8 segments of Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8)). ##Assembly-Data-START## Assembly Method :: SeqMan NGen v. v4 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1696 /organism="Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8))" /mol_type="viral cRNA" /strain="A/turkey/Indiana/16-001574-7/2016" /serotype="H7N8" /isolation_source="OP swab; pooled sample" /host="turkey; commercial" /db_xref="taxon:1785959" /segment="4" /country="USA: Dubois County, Indiana" /collection_date="Jan-2016" /note="NVSL 16-001574-7; EP1; LPAI" gene 7..1689 /gene="HA" CDS 7..1689 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="AMD38712.1" /db_xref="GI:985701768" /translation="MNTQILALIACMLIGAKGDKICLGHHAVANGTKVNTLTERGIEV VNATETVETANIKKICTQGKRPTDLGQCGLLGTLIGPPQCDQFLEFDADLIIERREGT DVCYPGKFTNKESLRQILRGSGGIDKESMGFTYSGIRTNGATSACRRSGSSFYAEMKW LLSNSDNAAFPQMTKSYRNPRSKPALIIWGVHHSGSVTEQTKLYGSGNKLITVGSSKY QQSFTPSPGARPQVNGQSGRIDFHWLLLDPNDTVTFTFNGAFIAPDRASFLRGESLGV QSDVPLDSSCKGDCFHNGGTIVSSLPFQNINPRTVGKCPRYVKQTSLLLATGMRNVPE NPKTRGLFGAIAGFIENGWEGLIDGWYGFRHQNAQGKGTAADYKSTQSAIDQITGKLN RLIDKTNQQFELIDNEFSEIEQQIGNVINWTRDSMTEVWSYNAELLVAMENQHTIDLA DSEMNKLYERVRKQLRENAEEDGTGCFEIFHKCDDQCMESIRNNTYDHTQYRAESLQN RIQIDPVKLSSGYKDIILWFSFGASCFLLLAIAMGLVFICIKNGNMRCTICI" sig_peptide 7..60 /gene="HA" mat_peptide 61..1023 /gene="HA" /product="HA1" mat_peptide 1024..1686 /gene="HA" /product="HA2" ORIGIN 1 tacaaaatga acactcaaat tttggcactc attgcttgta tgctgatcgg agctaaagga 61 gacaaaatat gtcttgggca ccatgctgtg gcaaatggaa caaaagtgaa cacactaaca 121 gagagaggaa tcgaagtagt aaatgccaca gaaacggtgg agactgcaaa tattaagaaa 181 atatgcactc aggggaaaag accaacagat ctgggacaat gcggacttct aggaacccta 241 ataggacctc cccaatgcga tcaattcctg gagtttgacg ctgatttaat aattgaacgg 301 agagaaggaa cggatgtgtg ttatcctggg aagttcacaa ataaagaatc actgaggcag 361 atcctccgag ggtcaggagg aattgataag gaatcaatgg gtttcactta tagtggaata 421 agaaccaatg gggcaacgag tgcttgcaga agatcaggtt cttccttcta tgcggagatg 481 aagtggttat tgtcgaattc agacaatgcg gcttttcccc aaatgactaa gtcgtacaga 541 aatcccagga gcaaaccagc tctaataatt tggggagtgc atcactctgg atcggttact 601 gaacagacca aactctatgg gagtggaaac aagttgataa cagtaggaag ctcgaaatac 661 cagcagtcat tcaccccaag cccgggggca cgaccacagg tgaatgggca atcaggaagg 721 attgattttc attggctact ccttgacccc aacgacacag tgactttcac tttcaatggg 781 gcattcatag ctcctgacag agcaagtttc cttagagggg agtcactagg agttcaaagt 841 gacgttcctt tggattctag ttgcaagggg gattgcttcc acaatggagg tacgatagtg 901 agctcactgc cattccagaa catcaaccct agaacagtgg gaaaatgccc tcgatatgtc 961 aaacagacaa gcctcctctt ggctacaggg atgaggaacg tcccagagaa ccccaagacc 1021 agaggtcttt ttggagcgat tgctggattc atagagaatg ggtgggaagg cctcattgat 1081 ggatggtacg gtttcaggca tcaaaatgca caaggaaaag gtactgcagc tgattacaaa 1141 agcactcaat ctgcaataga tcagatcaca ggcaaattga atcgtctaat tgacaaaaca 1201 aatcagcagt ttgaactgat agacaacgaa ttcagtgaaa tagaacaaca gattgggaat 1261 gtcattaatt ggacacgaga ttcaatgact gaagtatggt cgtataatgc tgaactgctg 1321 gtagctatgg aaaatcagca cacaatagat cttgcagact cagaaatgaa caaactttac 1381 gagcgtgtaa ggaaacaact gagggagaat gctgaagagg atgggactgg atgctttgag 1441 atattccata agtgtgatga tcaatgcatg gagagcataa ggaacaacac ctacgaccat 1501 acccaataca gagcagagtc attgcagaat agaatacaga tagacccagt gaaactgagt 1561 agtggataca aagacataat cttatggttt agcttcgggg catcatgttt tcttcttcta 1621 gccattgcaa tgggattggt cttcatttgc ataaagaatg gaaacatgcg gtgcactatt 1681 tgtatatagt ttgaga

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI616385A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI418930A/common goldeneye/Wisconsin/10OS4202/2010 (A/H7N6) segment 8 (NS)1509.80.000000e+00831/838 (99%)EPI513052A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 8 (NS)1498.80.000000e+00829/838 (98%)EPI512957A/greater scaup/Wisconsin/11OS5760/2011 (A/H10N2) segment 8 (NS)1498.80.000000e+00829/838 (98%)EPI512878A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 8 (NS)1498.80.000000e+00829/838 (98%)EPI420191A/bufflehead/California/3118/2011 (A/H4N8) segment 8 (NS)1498.80.000000e+00829/838 (98%)EPI512347A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 8 (NS)1493.20.000000e+00828/838 (98%)EPI454969A/bufflehead/North Carolina/NC6412-125/2005 (A/H4N8) segment 8 (NS)1408.30.000000e+00812/837 (97%)EPI87529A/mallard duck/ALB/25/1985 (A/H4N6) segment 8 (NS)1352.90.000000e+00804/839 (95%)EPI342913A/mallard/Alberta/254/2003 (A/H3N3) segment 8 (NS)1341.80.000000e+00802/839 (95%)EPI85990A/mallard duck/ALB/76/1985 (A/H6N3) segment 8 (NS)1341.80.000000e+00802/839 (95%)EPI468275A/blue winged teal/Louisiana/B228/1986 (A/H1N1) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI453660A/American green-winged teal/Interior Alaska/10BM08222R0/2010 (A/H3N8) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI453232A/northern pintail/Interior Alaska/9BM7972R0/2009 (A/H4N6) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI452866A/American green-winged teal/Interior Alaska/9BM8129R0/2009 (A/H4N6) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI452859A/northern pintail/Interior Alaska/9BM8119R0/2009 (A/H4N6) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI452760A/northern pintail/Interior Alaska/9BM11789R0/2009 (A/H3N8) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI452040A/mallard/Interior Alaska/9BM7216R0/2009 (A/H8N4) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI448339A/blue-winged teal/Louisiana/42B/1987 (A/H2N3) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI333780A/mallard/Illinois/4179/2009 (A/H11N9) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI120383A/duck/NJ/7717-70/1995 (A/H1N1) segment 8 (NS)1336.20.000000e+00802/840 (95%)EPI88577A/mallard duck/ALB/763/1983 (A/H11N8) segment 8 (NS)1336.20.000000e+00802/840 (95%)EPI87180A/mallard/ALB/118/1995 (A/H3N5) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI59768A/mallard/Ohio/399/1987 (A/H11N9) segment 8 (NS)1336.20.000000e+00801/839 (95%)EPI486838A/mallard/California/3310/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486826A/mallard/California/3223/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486803A/mallard/California/3174/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486796A/mallard/California/3172/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486789A/mallard/California/3171/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486366A/mallard/California/2997/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486320A/mallard/California/2885/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486100A/mallard/California/3435/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI486093A/mallard/California/3113/2012 (A/H3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI485048A/mallard/California/3078/2012 (A/H2N3) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI453324A/northern pintail/Interior Alaska/9BM6095R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI453317A/northern pintail/Interior Alaska/9BM6094R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI453310A/northern pintail/Interior Alaska/9BM6039R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI453239A/mallard/Interior Alaska/9BM10375R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI453211A/northern pintail/Interior Alaska/9BM6145R0/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI453204A/northern pintail/Interior Alaska/9BM6040R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI453097A/mallard/Interior Alaska/9BM12523R0/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452957A/northern pintail/Interior Alaska/9BM10835R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452943A/northern pintail/Interior Alaska/9BM10813R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452908A/mallard/Interior Alaska/9BM8829R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452901A/northern pintail/Interior Alaska/9BM8815R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452894A/northern pintail/Interior Alaska/9BM8803R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452880A/mallard/Interior Alaska/9BM8471R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI452830A/northern pintail/Interior Alaska/9BM7632R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452823A/northern pintail/Interior Alaska/9BM7620R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452795A/northern pintail/Interior Alaska/9BM12066R1/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452739A/northern pintail/Interior Alaska/9BM11572R0/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452704A/mallard/Interior Alaska/9BM11015R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452683A/northern pintail/Interior Alaska/9BM10877R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452669A/mallard/Interior Alaska/9BM10095R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452627A/northern pintail/Interior Alaska/9BM7254R0/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI452620A/northern pintail/Interior Alaska/9BM7252R0/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI452578A/mallard/Interior Alaska/9BM6886R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452571A/northern pintail/Interior Alaska/9BM6494R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452536A/northern pintail/Interior Alaska/9BM6146R0/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI452529A/northern pintail/Interior Alaska/9BM6144R0/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI452284A/mallard/Interior Alaska/9BM8389R0/2009 (A/H8N4) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI452026A/mallard/Interior Alaska/9BM7162R0/2009 (A/H8N4) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI451991A/northern pintail/Interior Alaska/9BM6226R0/2009 (A/H0) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI449996A/blue-winged teal/Louisiana/AI09-5159/2009 (A/H3N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI449975A/American green-winged teal/Texas/AI09-4396/2009 (A/H3N9) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI442305A/American green-winged teal/Alaska/44419-241/2008 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI437609A/pintail/Alberta/140/1996 (A/H1N1) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI437079A/mallard/Interior Alaska/9BM8470R0/2009 (A/H0) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI437016A/northern pintail/Interior Alaska/9BM9419R0/2009 (A/H0) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI436916A/northern pintail/Interior Alaska/9BM11661R0/2009 (A/H0) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI432991A/northern pintail/Interior Alaska/9BM4660R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI432977A/northern pintail/Interior Alaska/9BM4641R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI432963A/northern pintail/Interior Alaska/9BM4583R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI432916A/northern pintail/Interior Alaska/9BM4347R0/2009 (A/H4N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI432843A/mallard/Interior Alaska/9BM8468R0/2009 (A/H0) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI432820A/mallard/Interior Alaska/9BM8469R0/2009 (A/H0) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI401891A/knot/Delaware Bay/526/1988 (A/H6N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI370946A/mallard/Alberta/529/1980 (A/H2N3) segment 8 (NS)1330.70.000000e+00801/840 (95%)EPI344318A/mallard/Alberta/85/1994 (A/H3N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI343715A/pintail/Alberta/166/2003 (A/H3N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI158627A/mallard/MN/259/1999 (A/H3N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI86234A/pintail/Alberta/166/2003 (A/H3N6) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI85718A/knot/DE/526/1988 (A/H6N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI34151A/wigeon/Ohio/379/1988 (A/H5N2) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI22415A/pintail/Alberta/156/97 (A/H3N8) segment 8 (NS)1330.70.000000e+00800/839 (95%)EPI616925A/ruddy turnstone/New Jersey/65/1985 (A/H7N3) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI614523A/American green-winged teal/Wisconsin/12OS2994/2012 (A/H1N1) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI486910A/mallard/California/3418/2012 (A/H4N6) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI486782A/mallard/California/3167/2012 (A/H2N3) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI486732A/mallard/California/3148/2012 (A/H2N3) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI453153A/northern pintail/Interior Alaska/9BM9989R0/2009 (A/H4N6) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI453104A/northern pintail/Interior Alaska/9BM9447R0/2009 (A/H3N8) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI453090A/northern shoveler/Interior Alaska/9BM12519R0/2009 (A/H4N8) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI452816A/northern pintail/Interior Alaska/9BM7496R0/2009 (A/H4N6) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI452781A/northern pintail/Interior Alaska/9BM11915R0/2009 (A/H4N6) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI452613A/northern pintail/Interior Alaska/9BM7232R0/2009 (A/H4N6) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI452550A/American green-winged teal/Interior Alaska/9BM6258R0/2009 (A/H4N6) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI452494A/mallard/Interior Alaska/9BM10370R0/2009 (A/H10N7) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI452487A/mallard/Interior Alaska/9BM10369R0/2009 (A/H10N7) segment 8 (NS)1325.20.000000e+00799/839 (95%)EPI452277A/mallard/Interior Alaska/9BM8287R0/2009 (A/H10N7) segment 8 (NS)1325.20.000000e+00799/839 (95%)

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI334349A/bufflehead/Illinois/4016/2009 (A/H4N8) segment 5 (NP)2671.40.000000e+001480/1497 (98%)EPI419535A/American green-winged teal/Mississippi/11OS257/2011 (A/H11N9) segment 5 (NP)2654.80.000000e+001477/1497 (98%)EPI418545A/mallard/Wisconsin/10OS3166/2010 (A/H0) segment 5 (NP)2654.80.000000e+001477/1497 (98%)EPI512266A/blue-winged teal/Wisconsin/11OS2873/2011 (A/H3N2) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI616325A/northern shoveler/Missouri/12OS5755/2012 (A/H10N3) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI328267A/mallard/California/6957/2008 (A/H10N7) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI616165A/American green-winged teal/Ohio/12OS2137/2012 (A/H4N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI512884A/mallard/Wisconsin/11OS4204/2011 (A/H0) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI689534A/American green winged teal/Mississippi/A00630203/2009 (A/H7N6) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI328574A/northern shoveler/California/9710/2008 (A/H10N7) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI299358A/northern shoveler/Mississippi/09OS589/2009 (A/H4N6) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI333661A/American green-winged teal/Mississippi/300/2010 (A/H11N9) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI690051A/northern shoveler/Nevada/A00505416/2008 (A/H7N6) segment 5 (NP)2604.90.000000e+001469/1498 (98%)EPI328481A/green-winged teal/California/10197/2008 (A/H10N7) segment 5 (NP)2604.90.000000e+001469/1498 (98%)EPI645515A/blue-winged teal/Ohio/13OS2104/2013 (A/H2N3) segment 5 (NP)2588.30.000000e+001465/1497 (97%)EPI178799A/northern shoveler/California/HKWF392sm/2007 (A/H10N7) segment 5 (NP)2588.30.000000e+001465/1497 (97%)EPI435840A/mallard/Alberta/152/2006 (A/H1N3) segment 5 (NP)2582.70.000000e+001464/1497 (97%)EPI328644A/mallard/California/11032/2008 (A/H0N8) segment 5 (NP)2582.70.000000e+001464/1497 (97%)EPI328589A/northern shoveler/California/9235/2008 (A/H10N8) segment 5 (NP)2582.70.000000e+001464/1497 (97%)EPI328075A/northern shoveler/California/9781/2008 (A/H1N3) segment 5 (NP)2582.70.000000e+001465/1498 (97%)EPI290714A/northern shoveler/Washington/44249-752/2006 (A/H7N3) segment 5 (NP)2582.70.000000e+001464/1497 (97%)EPI290706A/northern shoveler/Washington/44249-749/2006 (A/H7N3) segment 5 (NP)2582.70.000000e+001464/1497 (97%)EPI442357A/greater white-fronted goose/Alaska/44049-046/2006 (A/H5N2) segment 5 (NP)2577.20.000000e+001463/1497 (97%)EPI286140A/white front goose/Alaska//445210/2006 (A/H5N2) segment 5 (NP)2577.20.000000e+001463/1497 (97%)EPI280601A/white front goose/Alaska/477003/2007 (A/H5N2) segment 5 (NP)2571.70.000000e+001462/1497 (97%)EPI280585A/tundra swan/Alaska/442960/2006 (A/H5N2) segment 5 (NP)2571.70.000000e+001462/1497 (97%)EPI292417A/American green-winged teal/California/44287-305/2007 (A/H7N6) segment 5 (NP)2566.10.000000e+001461/1497 (97%)EPI290661A/American green-winged teal/California/28228/2007 (A/H7N6) segment 5 (NP)2566.10.000000e+001461/1497 (97%)EPI292804A/northern shoveler/California/JN770/2006 (A/H10N3) segment 5 (NP)2564.30.000000e+001454/1487 (97%)EPI442383A/tundra swan/Alaska/44049-168/2006 (A/H5N2) segment 5 (NP)2562.40.000000e+001457/1492 (97%)EPI343451A/mallard/Alberta/190/2006 (A/H0) segment 5 (NP)2560.60.000000e+001460/1497 (97%)EPI241717A/mallard/Alberta/11513/2005 (A/H0) segment 5 (NP)2560.60.000000e+001460/1497 (97%)EPI689675A/blue winged teal/Missouri/A00624484/2008 (A/H7N3) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI689668A/blue winged teal/Missouri/A00624483/2008 (A/H7N3) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI475399A/pintail/Alberta/68/2005 (A/H1N1) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI437289A/blue-winged teal/Alberta/405/2008 (A/H10N7) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI435791A/pintail/Alberta/69/2005 (A/H1N1) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI468371A/pintail/Alberta/69/2005 (A/H1N1) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI455875A/mallard/Minnesota/Sg-00630/2008 (A/H10N7) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI449918A/mallard/Minnesota/AI09-3819/2009 (A/H0) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI435805A/mallard/Alberta/257/2005 (A/H1N1) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI435798A/mallard/Alberta/240/2005 (A/H1N1) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI334118A/mallard/Illinois/3747/2009 (A/H6N1) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI327273A/mallard/Alberta/11393/2005 (A/H1N1) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI280481A/waterfowl/Colorado/443593/2006 (A/H5N2) segment 5 (NP)2549.50.000000e+001458/1497 (97%)EPI503530A/wild bird/Chile/1805/2008 (A/H5N9) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI450032A/mallard/Arkansas/AI09-5761/2009 (A/H2N3) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI449854A/northern pintail/Minnesota/AI09-3254/2009 (A/H6N2) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI333933A/northern pintail/Wisconsin/4198/2009 (A/H11N9) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI298301A/blue-winged teal/Minnesota/Sg-00201/2007 (A/H4N6) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI222304A/mallard/Manitoba/23912/2007 (A/H4N7) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI131965A/mallard/Missouri/209/2006 (A/H11N9) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI442354A/greater white-fronted goose/Alaska/44065-031/2006 (A/H5N2) segment 5 (NP)2542.10.000000e+001446/1481 (97%)EPI689730A/domestic duck/West Virginia/A00140913/2008 (A/H7N3) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI452222A/northern pintail/Interior Alaska/9BM7882R0/2009 (A/H8N4) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI452145A/northern pintail/Interior Alaska/9BM11643R0/2009 (A/H8N4) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI452004A/northern pintail/Interior Alaska/9BM6510R0/2009 (A/H8N4) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI436946A/northern pintail/Interior Alaska/9BM8109R0/2009 (A/H8N4) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI407675A/northern shoveler/Interior Alaska/9BM1447R2/2009 (A/H8N4) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI403274A/northern pintail/Alberta/3/2009 (A/H0) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI334203A/northern shoveler/Mississippi/236/2010 (A/H10N7) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI333733A/northern shovelerMissouri/196/2009 (A/H10N3) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI299510A/American green-winged teal/Illinois/08OS2713/2008 (A/H10N7) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI299502A/mallard/Illinois/08OS2711/2008 (A/H10N7) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI299398A/mallard/Illinois/08OS2710/2008 (A/H10N7) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI290800A/mallard/Washington/44338-195/2007 (A/H12N5) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI227450A/redhead/Alberta/11817/2005 (A/H4N6) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI220550A/green winged teal/California/AKS1305/2008 (A/H11N9) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI700493A/mallard/Interior Alaska/11ML00058/2011 (A/H7N3) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI699583A/mallard/Interior Alaska/11BM03577/2011 (A/H7N3) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI689742A/domestic duck/West Virginia/A00140915/2008 (A/H7N3) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI689723A/domestic duck/West Virginia/A00140912/2008 (A/H7N3) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI455976A/mallard/Minnesota/Sg-01005/2008 (A/H0) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI452124A/northern pintail/Interior Alaska/9BM11409R0/2009 (A/H12N5) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI450045A/northern shoveler/Arkansas/AI09-6012/2009 (A/H10N3) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI448675A/blue-winged teal/North Dakota/Sg-00740/2008 (A/H3N8) segment 5 (NP)2532.90.000000e+001456/1498 (97%)EPI436979A/northern pintail/Interior Alaska/9BM8967R0/2009 (A/H8N4) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI433101A/American green-winged teal/Interior Alaska/9BM5045R0/2009 (A/H8N4) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI415985A/northern pintail/Interior Alaska/10BM02549R0 (A/H0) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI413412A/mallard/Ohio/10OS1319/2010 (A/H4N6) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI327859A/mallard/California/6768/2009 (A/H1N1) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI299558A/environment/Indiana/08OS3524/2008 (A/H1N2) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI299486A/mallard/Illinois/08OS2315/2008 (A/H4N6) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI292689A/American green-winged teal/California/44363-067/2007 (A/H11N9) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI280841A/mallard/Oregon/461067-2/2006 (A/H5N2) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI230699A/mallard/California/K752/2006 (A/H10N7) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI690027A/northern pintail/Texas/A00466052/2009 (A/H7N3) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI616825A/mallard/Minnesota/AI07-3433/2007 (A/H7N3) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI513040A/mallard/Illinois/11OS5570/2011 (A/H3N8) segment 5 (NP)2527.30.000000e+001455/1498 (97%)EPI512339A/mallard/Wisconsin/11OS4493/2011 (A/H1N3) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI455983A/mallard/Minnesota/Sg-01030/2008 (A/H10N7) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI452018A/northern pintail/Interior Alaska/9BM7152R2/2009 (A/H8N4) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI436884A/mallard/Interior Alaska/9BM10537R0/2009 (A/H8N4) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI432856A/northern shoveler/Interior Alaska/9BM2925R0/2009 (A/H8N4) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI414327A/mallard/Interior Alaska/9BM2705R0/2009 (A/H8N4) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI414305A/mallard/Interior Alaska/9BM2351R0/2009 (A/H8N4) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI414290A/mallard/Interior Alaska/9BM2388R0/2009 (A/H8N4) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI387268A/northern shoveler/California/3628/2011 (A/H10) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI333821A/lesser scaup/Illinois/4115/2009 (A/H10N7) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI328716A/mallard/California/8118/2008 (A/H11N9) segment 5 (NP)2527.30.000000e+001454/1497 (97%)

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI486916A/northern pintail/California/2789/2011 (A/H9N2) segment 3 (PA)3818.10.000000e+002123/2151 (98%)EPI549237A/blue-winged teal/TX/AI12-802/2012 (A/H10N3) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI511416A/mallard/Wisconsin/11OS4368/2011 (A/H11N9) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI549236A/blue-winged teal/TX/AI12-801/2012 (A/H10N3) segment 3 (PA)3796.00.000000e+002111/2139 (98%)EPI584361A/redhead/Ohio/13OS0406/2013 (A/H7N3) segment 3 (PA)3790.40.000000e+002118/2151 (98%)EPI526250A/American green-winged teal/Wisconsin/13OS3468/2013 (A/H7N3) segment 3 (PA)3784.90.000000e+002117/2151 (98%)EPI614135A/American green-winged teal/Ohio/12OS2256/2012 (A/H6N5) segment 3 (PA)3779.40.000000e+002116/2151 (98%)EPI614026A/American green-winged teal/Wisconsin/12OS2997/2012 (A/H4N6) segment 3 (PA)3779.40.000000e+002116/2151 (98%)EPI343060A/blue-winged teal/Alberta/378/2007 (A/H0) segment 3 (PA)3779.40.000000e+002116/2151 (98%)EPI343049A/blue-winged teal/Alberta/380/2007 (A/H0) segment 3 (PA)3773.80.000000e+002115/2151 (98%)EPI526211A/blue-winged teal/Ohio/13OS2037/2013 (A/H7N1) segment 3 (PA)3768.30.000000e+002114/2151 (98%)EPI511468A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 3 (PA)3768.30.000000e+002114/2151 (98%)EPI345105A/bufflehead/Alberta/399/2007 (A/H0) segment 3 (PA)3768.30.000000e+002114/2151 (98%)EPI511376A/greater scaup/Wisconsin/11OS5760/2011 (A/H10N2) segment 3 (PA)3762.70.000000e+002113/2151 (98%)EPI511371A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 3 (PA)3762.70.000000e+002113/2151 (98%)EPI511430A/American green-winged teal/Mississippi/11OS5903/2011 (A/H4N6) segment 3 (PA)3751.70.000000e+002111/2151 (98%)EPI614117A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 3 (PA)3746.10.000000e+002110/2151 (98%)EPI511346A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 3 (PA)3740.60.000000e+002109/2151 (98%)EPI614088A/mallard/Missouri/12OS5759/2012 (A/H11N9) segment 3 (PA)3729.50.000000e+002107/2151 (97%)EPI614017A/blue winged-teal/Wisconsin/12OS3069/2012 (A/H11N9) segment 3 (PA)3690.70.000000e+002100/2151 (97%)EPI700509A/mallard/Interior Alaska/11ML00069/2011 (A/H2N3) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI227246A/mallard/Alberta/11527/2005 (A/H3N8) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI332987A/pintail/Alaska/99/2005 (A/H0) segment 3 (PA)3635.30.000000e+002090/2151 (97%)EPI298663A/mallard/Interior Alaska/6MP0891/2006 (A/H4N6) segment 3 (PA)3635.30.000000e+002090/2151 (97%)EPI614217A/mallard/Alberta/26/2001 (A/H0) segment 3 (PA)3629.80.000000e+002089/2151 (97%)EPI59866A/green-winged teal/Ohio/1844/2005 (A/H11N9) segment 3 (PA)3629.80.000000e+002089/2151 (97%)EPI49402A/pintail/Alaska/310/2005 (A/H4N6) segment 3 (PA)3629.80.000000e+002089/2151 (97%)EPI333931A/northern pintail/Wisconsin/4198/2009 (A/H11N9) segment 3 (PA)3624.20.000000e+002089/2152 (97%)EPI328225A/mallard/California/8834/2008 (A/H5N9) segment 3 (PA)3624.20.000000e+002088/2151 (97%)EPI298535A/northern pintail/Interior Alaska/6MP0817/2006 (A/H0) segment 3 (PA)3624.20.000000e+002088/2151 (97%)EPI238090A/mallard/Minnesota/382/2000 (A/H5N3) segment 3 (PA)3624.20.000000e+002088/2151 (97%)EPI298607A/green-winged teal/Interior Alaska/6MP1077/2006 (A/H3N8) segment 3 (PA)3618.70.000000e+002087/2151 (97%)EPI159138A/mallard/MN/479/2000 (A/H5N3) segment 3 (PA)3618.70.000000e+002087/2151 (97%)EPI442231A/greater white-fronted goose/Alaska/44064-108/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI299803A/mallard/Interior Alaska/6MP0990R1/2006 (A/H0) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI298759A/mallard/Interior Alaska/6MP0038BR2/2006 (A/H2N3) segment 3 (PA)3613.20.000000e+002086/2151 (96%)EPI298687A/mallard/Interior Alaska/6MP0988/2006 (A/H0) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI298647A/northern pintail/Interior Alaska/6MP0792/2006 (A/H2N3) segment 3 (PA)3613.20.000000e+002086/2151 (96%)EPI298575A/mallard/Interior Alaska/6MP0992/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI298567A/mallard/Interior Alaska/6MP0991/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI288891A/mallard/Alaska/44185-044/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI288886A/mallard/Alaska/44187-131/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI288885A/mallard/Alaska/44185-067/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI288878A/mallard/Alaska/44187-129/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI288866A/mallard/Alaska/44187-043/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI288857A/mallard/Alaska/44185-078/2006 (A/H3N2) segment 3 (PA)3613.20.000000e+002087/2152 (96%)EPI288884A/mallard/Alaska/44185-043/2006 (A/H3N2) segment 3 (PA)3605.80.000000e+002085/2152 (96%)EPI442279A/emperor goose/Alaska/44323-246/2007 (A/H3N8) segment 3 (PA)3602.10.000000e+002084/2151 (96%)EPI442257A/emperor goose/Alaska/44063-066/2006 (A/H2N5) segment 3 (PA)3602.10.000000e+002084/2151 (96%)EPI288890A/mallard/Alaska/44183-124/2006 (A/H2N3) segment 3 (PA)3602.10.000000e+002084/2151 (96%)EPI229634A/mallard/Maryland/948/2004 (A/H11N9) segment 3 (PA)3602.10.000000e+002084/2151 (96%)EPI442254A/emperor goose/Alaska/44063-075/2006 (A/H2N5) segment 3 (PA)3598.40.000000e+002083/2151 (96%)EPI614212A/pintail/Alberta/25/2001 (A/H7N3) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI442233A/emperor goose/Alaska/44064-075/2006 (A/H2N5) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI442230A/brant/Alaska/44063-007/2006 (A/H2N1) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI343802A/mallard/Alberta/22/2001 (A/H7N3) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI343794A/mallard/Alberta/27/2001 (A/H7N3) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI299763A/mallard/Interior Alaska/6MP0905/2006 (A/H10N9) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI298767A/mallard/Interior Alaska/6MP0163AR2/2006 (A/H3N8) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI298671A/mallard/Interior Alaska/6MP0951/2006 (A/H3N8) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI298639A/mallard/Interior Alaska/6MP0272/2006 (A/H3N8) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI229642A/mallard/Maryland/950/2004 (A/H11N9) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI229618A/mallard/Maryland/922/2004 (A/H11N9) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI229599A/blue-winged teal/Ohio/658/2004 (A/H7N3) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI229592A/green-winged teal/Ohio/648/2004 (A/H7N3) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI172224A/blue-winged teal/Manitoba/13436/2005 (A/H3N8) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI166788A/northern pintail/Alaska/44183-123/2006 (A/H2N3) segment 3 (PA)3596.50.000000e+002077/2142 (96%)EPI52155A/blue-winged teal/Ohio/658/2004 (A/H7N3) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI442260A/emperor goose/Alaska/44063-029/2006 (A/H2N1) segment 3 (PA)3591.00.000000e+002082/2151 (96%)EPI298735A/mallard/Interior Alaska/6MP0972R1/2006 (A/H3N8) segment 3 (PA)3591.00.000000e+002082/2151 (96%)EPI285899A/northern pintail/California/466371/2006 (A/H5N2) segment 3 (PA)3591.00.000000e+002082/2151 (96%)EPI229650A/mallard/Maryland/954/2004 (A/H11N9) segment 3 (PA)3591.00.000000e+002082/2151 (96%)EPI229626A/mallard/Maryland/926/2004 (A/H11N9) segment 3 (PA)3591.00.000000e+002083/2152 (96%)EPI42054A/mallard/Alberta/34/2001 (A/H7N1) segment 3 (PA)3591.00.000000e+002082/2151 (96%)EPI442237A/emperor goose/Alaska/44063-145/2006 (A/H2N1) segment 3 (PA)3587.30.000000e+002081/2151 (96%)EPI614244A/northern shoveler/North Carolina/1523546/2005 (A/H0) segment 3 (PA)3585.50.000000e+002081/2151 (96%)EPI298503A/green-winged teal/Interior Alaska/6MP0736/2006 (A/H3N8) segment 3 (PA)3585.50.000000e+002081/2151 (96%)EPI60208A/green-winged teal/Ohio/1324/2005 (A/H4N6) segment 3 (PA)3585.50.000000e+002081/2151 (96%)EPI59999A/green-winged teal/Ohio/1324/2005 (A/H4N6) segment 3 (PA)3585.50.000000e+002081/2151 (96%)EPI343337A/mallard/Alberta/256/2006 (A/H0) segment 3 (PA)3579.90.000000e+002080/2151 (96%)EPI342991A/mallard/Alberta/507/2008 (A/H3N8) segment 3 (PA)3579.90.000000e+002081/2152 (96%)EPI275169A/thick-billed murre/Alaska/44085-040/2006 (A/H10N3) segment 3 (PA)3579.90.000000e+002080/2151 (96%)EPI80956A/mallard/Alberta/24/01 (A/H7N3) segment 3 (PA)3579.90.000000e+002080/2151 (96%)EPI475436A/pintail/Alberta/68/2005 (A/H1N1) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI468612A/mallard/Alberta/201/1998 (A/H1N1) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI454182A/American black duck/North Carolina/1321373/2004 (A/H3N2) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI343304A/mallard/Alberta/297/2006 (A/H4N6) segment 3 (PA)3574.40.000000e+002080/2152 (96%)EPI286504A/American widgeon/Washington/466769/2006 (A/H5N2) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI229506A/American black duck/North Carolina/675-075/2004 (A/H3N2) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI178029A/northern pintail/California/44221-789/2006 (A/H5N2) segment 3 (PA)3574.40.000000e+002073/2142 (96%)EPI159712A/turkey/CA/358533/2005 (A/H4N8) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI86732A/mallard/ALB/201/1998 (A/H1N1) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI227285A/mallard/California/GL30/2005 (A/H4N6) segment 3 (PA)3570.70.000000e+002079/2152 (96%)EPI468369A/pintail/Alberta/69/2005 (A/H1N1) segment 3 (PA)3568.80.000000e+002078/2151 (96%)EPI435728A/pintail/Alberta/69/2005 (A/H1N1) segment 3 (PA)3568.80.000000e+002078/2151 (96%)EPI343356A/mallard/Alberta/246/2006 (A/H4N6) segment 3 (PA)3568.80.000000e+002079/2152 (96%)EPI343348A/mallard/Alberta/254/2006 (A/H4N6) segment 3 (PA)3568.80.000000e+002079/2152 (96%)EPI343328A/mallard/Alberta/258/2006 (A/H4N6) segment 3 (PA)3568.80.000000e+002079/2152 (96%)EPI229692A/chicken/British Columbia/04 (A/H7N3) segment 3 (PA)3568.80.000000e+002078/2151 (96%)EPI178030A/northern pintail/California/44221-794/2006 (A/H3N8) segment 3 (PA)3568.80.000000e+002072/2142 (96%)

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI616386A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 2 (PB1)4133.90.000000e+002262/2274 (99%)EPI512213A/American green-winged teal/Mississippi/12OS405/2012 (A/H10N7) segment 2 (PB1)4111.80.000000e+002258/2274 (99%)EPI512237A/mallard/Arkansas/12OS184/2012 (A/H10N7) segment 2 (PB1)4100.70.000000e+002256/2274 (99%)EPI616094A/northern shoveler/Ohio/12OS5647/2012 (A/H2N3) segment 2 (PB1)4089.60.000000e+002254/2274 (99%)EPI526269A/American green-winged teal/Ohio/13OS1777/2013 (A/H7N3) segment 2 (PB1)4078.50.000000e+002252/2274 (99%)EPI645359A/American green-winged teal/Ohio/13OS1769/2013 (A/H7N2) segment 2 (PB1)4073.00.000000e+002251/2274 (98%)EPI645352A/blue-winged teal/Ohio/13OS1770/2013 (A/H7N3) segment 2 (PB1)4073.00.000000e+002251/2274 (98%)EPI616348A/American green-winged teal/Mississippi/12OS5061/2012 (A/H5N2) segment 2 (PB1)4067.40.000000e+002250/2274 (98%)EPI526456A/blue-winged teal/Ohio/13OS1773/2013 (A/H7N3) segment 2 (PB1)4056.40.000000e+002249/2275 (98%)EPI542051A/mallard/Idaho/ND0002644/2013 (A/H3N8) segment 2 (PB1)4050.80.000000e+002247/2274 (98%)EPI419327A/mallard/Illinois/10OS4111/2010 (A/H10N7) segment 2 (PB1)4050.80.000000e+002247/2274 (98%)EPI451933A/mallard/Interior Alaska/10BM11434R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451912A/northern pintail/Interior Alaska/10BM10906R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451877A/mallard/Interior Alaska/10BM10811R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451870A/northern pintail/Interior Alaska/10BM10809R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451863A/northern pintail/Interior Alaska/10BM10807R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451856A/northern pintail/Interior Alaska/10BM10805R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451849A/northern pintail/Interior Alaska/10BM10801R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451826A/northern pintail/Interior Alaska/10BM10476R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451819A/mallard/Interior Alaska/10BM10324R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451812A/northern pintail/Interior Alaska/10BM10166R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451805A/northern pintail/Interior Alaska/10BM09832R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451798A/mallard/Interior Alaska/10BM09818R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451793A/northern pintail/Interior Alaska/10BM09481R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451751A/northern pintail/Interior Alaska/10BM09348R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451744A/northern pintail/Interior Alaska/10BM09347R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451709A/northern pintail/Interior Alaska/10BM08705R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451674A/mallard/Interior Alaska/10BM08099R0/2010 (A/H0) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451658A/northern pintail/Interior Alaska/10BM07737R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451644A/mallard/Interior Alaska/10BM07501R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451637A/northern pintail/Interior Alaska/10BM07469R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451630A/northern pintail/Interior Alaska/10BM07458R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451623A/northern pintail/Interior Alaska/10BM07260R0/2010 (A/H0) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451601A/northern pintail/Interior Alaska/10BM07114R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451594A/northern pintail/Interior Alaska/10BM07106R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451587A/mallard/Interior Alaska/10BM07092R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451580A/mallard/Interior Alaska/10BM07085R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451454A/mallard/Interior Alaska/10BM09141R0/2010 (A/H0) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436829A/mallard/Interior Alaska/10BM06911R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436822A/mallard/Interior Alaska/10BM06909R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436811A/mallard/Interior Alaska/10BM06905R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436804A/northern pintail/Interior Alaska/10BM06899R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436796A/northern pintail/Interior Alaska/10BM06524R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436666A/mallard/Interior Alaska/10BM05860R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436575A/mallard/Interior Alaska/10BM05347R0/2010 (A/H7N3) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI432814A/northern pintail/Interior Alaska/10BM06901R0/2010 (A/H0) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI451961A/mallard/Interior Alaska/10BM12534R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451779A/mallard/Interior Alaska/10BM09563R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451772A/mallard/Interior Alaska/10BM09548R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451765A/mallard/Interior Alaska/10BM09539R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451758A/mallard/Interior Alaska/10BM09528R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451737A/northern pintail/Interior Alaska/10BM09181R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451688A/mallard/Interior Alaska/10BM08120R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451681A/mallard/Interior Alaska/10BM08100R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451615A/northern pintail/Interior Alaska/10BM07121R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451608A/northern pintail/Interior Alaska/10BM07120R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451563A/mallard/Interior Alaska/10BM07072R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451556A/mallard/Interior Alaska/10BM07066R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451549A/northern pintail/Interior Alaska/10BM07029R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI451441A/northern pintail/Interior Alaska/10BM07267R0/2010 (A/H0) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI436867A/northern pintail/Interior Alaska/10BM06720R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI436793A/northern pintail/Interior Alaska/10BM06895R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI436773A/mallard/Interior Alaska/10BM06838R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI436679A/northern pintail/Interior Alaska/10BM06306R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI436665A/northern pintail/Interior Alaska/10BM06303R0/2010 (A/H7N3) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI453953A/mallard/Interior Alaska/10BM11311R0/2010 (A/H3N8) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI453932A/mallard/Interior Alaska/10BM10829R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451919A/northern pintail/Interior Alaska/10BM11208R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451905A/mallard/Interior Alaska/10BM10876R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451898A/mallard/Interior Alaska/10BM10861R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451891A/mallard/Interior Alaska/10BM10859R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451884A/northern pintail/Interior Alaska/10BM10853R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451842A/northern pintail/Interior Alaska/10BM10790R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451833A/mallard/Interior Alaska/10BM10787R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451730A/mallard/Interior Alaska/10BM08884R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451723A/mallard/Interior Alaska/10BM08883R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451716A/mallard/Interior Alaska/10BM08874R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451702A/northern pintail/Interior Alaska/10BM08586R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451695A/northern pintail/Interior Alaska/10BM08400R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451666A/northern pintail/Interior Alaska/10BM07821R0/2010 (A/H0) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI616327A/northern shoveler/Missouri/12OS5755/2012 (A/H10N3) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI451940A/northern pintail/Interior Alaska/10BM11945R0/2010 (A/H7N3) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI699707A/mallard/Interior Alaska/11BM03859/2011 (A/H0) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI699570A/mallard/Interior Alaska/11BM03102/2011 (A/H4N6) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI512982A/American green-winged teal/Wisconsin/11OS3053/2011 (A/H6N1) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI419688A/mallard/Missouri/10MO0391/2010 (A/H10N7) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI614557A/blue winged-teal/Wisconsin/12OS2603/2012 (A/H3N2) segment 2 (PB1)4006.50.000000e+002239/2274 (98%)EPI542045A/mallard/Idaho/ND0002643/2013 (A/H4N8) segment 2 (PB1)4006.50.000000e+002239/2274 (98%)EPI699448A/mallard/Interior Alaska/11BM02089/2011 (A/H4N6) segment 2 (PB1)4001.00.000000e+002238/2274 (98%)EPI542057A/mallard/Idaho/ND0002645/2013 (A/H4N6) segment 2 (PB1)4001.00.000000e+002238/2274 (98%)EPI512733A/American green-winged teal/Wisconsin/11OS3431/2011 (A/H5N2) segment 2 (PB1)4001.00.000000e+002238/2274 (98%)EPI700085A/American wigeon/Interior Alaska/11CH00036/2011 (A/H4N6) segment 2 (PB1)3995.40.000000e+002237/2274 (98%)EPI699647A/mallard/Interior Alaska/11BM03599/2011 (A/H4N6) segment 2 (PB1)3995.40.000000e+002237/2274 (98%)EPI334243A/mallard/Missouri/350/2009 (A/H11N9) segment 2 (PB1)3995.40.000000e+002238/2275 (98%)EPI700078A/mallard/Interior Alaska/11CH00019/2011 (A/H4N6) segment 2 (PB1)3989.90.000000e+002237/2275 (98%)EPI699556A/mallard/Interior Alaska/11BM02987/2011 (A/H2N6) segment 2 (PB1)3989.90.000000e+002236/2274 (98%)EPI542063A/mallard/Idaho/ND0002646/2013 (A/H4N6) segment 2 (PB1)3989.90.000000e+002236/2274 (98%)EPI700503A/northern pintail/Interior Alaska/11ML00065/2011 (A/H3N6) segment 2 (PB1)3984.30.000000e+002236/2275 (98%)EPI699728A/American green-winged teal/Interior Alaska/11BM03897/2011 (A/H3N8) segment 2 (PB1)3984.30.000000e+002235/2274 (98%)EPI419930A/mallard/California/2556V/2011 (A/H3N8) segment 2 (PB1)3984.30.000000e+002235/2274 (98%)

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI616237A/blue-winged teal/Ohio/12OS2106/2012 (A/H4N6) segment 1 (PB2)4084.10.000000e+002257/2280 (98%)EPI418607A/northern shoveler/Arkansas/11OS333/2011 (A/H0) segment 1 (PB2)4050.80.000000e+002251/2280 (98%)EPI263193A/blue-winged teal/Texas/Sg-00081/2007 (A/H4N6) segment 1 (PB2)4050.80.000000e+002251/2280 (98%)EPI512780A/mallard/Wisconsin/11OS3407/2011 (A/H4N9) segment 1 (PB2)4039.70.000000e+002249/2280 (98%)EPI298321A/mallard/Minnesota/Sg-00220/2007 (A/H6N1) segment 1 (PB2)4039.70.000000e+002249/2280 (98%)EPI513061A/mallard/Wisconsin/11OS3577/2011 (A/H6N5) segment 1 (PB2)4034.20.000000e+002248/2280 (98%)EPI513029A/blue-winged teal/Iowa/44555-551/2011 (A/H3N2) segment 1 (PB2)4034.20.000000e+002248/2280 (98%)EPI403280A/northern pintail/Alberta/3/2009 (A/H0) segment 1 (PB2)4034.20.000000e+002248/2280 (98%)EPI449885A/blue-winged Teal/Minnesota/AI09-3575/2009 (A/H4N8) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI449783A/mallard/Minnesota/AI09-2519/2009 (A/H3N6) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI435864A/mallard/Alberta/91/2007 (A/H1N5) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI334157A/American green-winged teal/Illinois/3053/2009 (A/H0) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI327703A/mallard/California/5351/2009 (A/H1N1) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI298202A/mallard/Minnesota/Sg-00214/2007 (A/H6N1) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI298138A/mallard/Minnesota/Sg-00182/2007 (A/H6N1) segment 1 (PB2)4028.70.000000e+002248/2281 (98%)EPI284098A/green-winged teal/Minnesota/Sg-00197/2007 (A/H6N8) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI263185A/blue-winged teal/Texas/Sg-00080/2007 (A/H4N6) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI263145A/blue-winged teal/Texas/Sg-00075/2007 (A/H4N6) segment 1 (PB2)4028.70.000000e+002247/2280 (98%)EPI333581A/mallard/Mississippi/413/2010 (A/H1N1) segment 1 (PB2)4023.10.000000e+002246/2280 (98%)EPI298122A/mallard/Minnesota/Sg-00167/2007 (A/H6N1) segment 1 (PB2)4023.10.000000e+002240/2271 (98%)EPI154574A/northern shoveler/California/HKWF1370/2007 (A/H10N3) segment 1 (PB2)4023.10.000000e+002247/2281 (98%)EPI449997A/blue-winged teal/Louisiana/AI09-5159/2009 (A/H3N8) segment 1 (PB2)4017.60.000000e+002245/2280 (98%)EPI449964A/northern pintail/Minnesota/AI09-4322/2009 (A/H3N8) segment 1 (PB2)4017.60.000000e+002245/2280 (98%)EPI449432A/mallard/Minnesota/Sg-00692/2008 (A/H2N3) segment 1 (PB2)4017.60.000000e+002245/2280 (98%)EPI449285A/northern pintail/North Dakota/Sg-00749/2008 (A/H0) segment 1 (PB2)4017.60.000000e+002245/2280 (98%)EPI328351A/environment/California/7810/2008 (A/H4N6) segment 1 (PB2)4017.60.000000e+002245/2280 (98%)EPI290812A/mallard/Washington/44338-362/2007 (A/H11N9) segment 1 (PB2)4017.60.000000e+002245/2280 (98%)EPI449412A/mallard/Minnesota/Sg-00672/2008 (A/H3N8) segment 1 (PB2)4012.00.000000e+002244/2280 (98%)EPI449320A/blue-winged teal/Minnesota/Sg-00787/2008 (A/H3N8) segment 1 (PB2)4012.00.000000e+002244/2280 (98%)EPI448578A/mallard/Minnesota/Sg-00571/2008 (A/H0) segment 1 (PB2)4012.00.000000e+002244/2280 (98%)EPI418783A/American green-winged teal/Illinois/10OS3343/2010 (A/H2N3) segment 1 (PB2)4012.00.000000e+002244/2280 (98%)EPI512200A/northern shoveler/Mississippi/12OS362/2012 (A/H7N7) segment 1 (PB2)4006.50.000000e+002243/2280 (98%)EPI449418A/mallard/Minnesota/Sg-00674/2008 (A/H3N8) segment 1 (PB2)4006.50.000000e+002243/2280 (98%)EPI448671A/mallard/North Dakota/Sg-00737/2008 (A/H6N8) segment 1 (PB2)4006.50.000000e+002243/2280 (98%)EPI447990A/mallard/Arkansas/AI09-5944/2009 (A/H4N8) segment 1 (PB2)4006.50.000000e+002243/2280 (98%)EPI418970A/mallard/Wisconsin/10OS3144/2010 (A/H6N1) segment 1 (PB2)4006.50.000000e+002243/2280 (98%)EPI342961A/northern pintail/Alberta/8/2009 (A/H3N8) segment 1 (PB2)4006.50.000000e+002243/2280 (98%)EPI333769A/mallard/Illinois/4180/2009 (A/H6N1) segment 1 (PB2)4006.50.000000e+002243/2280 (98%)EPI616168A/American green-winged teal/Ohio/12OS2137/2012 (A/H4N6) segment 1 (PB2)4001.00.000000e+002243/2281 (98%)EPI614546A/blue winged-teal/Wisconsin/12OS4239/2012 (A/H3N2) segment 1 (PB2)4001.00.000000e+002242/2280 (98%)EPI512298A/mallard/Arkansas/12OS140/2012 (A/H11N3) segment 1 (PB2)4001.00.000000e+002242/2280 (98%)EPI512245A/American green-winged teal/Mississippi/12OS191/2012 (A/H5N3) segment 1 (PB2)4001.00.000000e+002242/2280 (98%)EPI451652A/mallard/Interior Alaska/10BM07575R0/2010 (A/H7N3) segment 1 (PB2)4001.00.000000e+002242/2280 (98%)EPI449292A/blue-winged teal/North Dakota/Sg-00750/2008 (A/H4N6) segment 1 (PB2)4001.00.000000e+002242/2280 (98%)EPI419659A/gadwall/Missouri/10MO0280/2010 (A/H5N2) segment 1 (PB2)4001.00.000000e+002242/2280 (98%)EPI342989A/mallard/Alberta/507/2008 (A/H3N8) segment 1 (PB2)4001.00.000000e+002242/2280 (98%)EPI333785A/mallard/Illinois/4162/2009 (A/H11N2) segment 1 (PB2)4001.00.000000e+002243/2281 (98%)EPI435836A/mallard/Alberta/128/2006 (A/H1N1) segment 1 (PB2)3995.40.000000e+002241/2280 (98%)EPI418864A/mallard/Wisconsin/10OS2667/2010 (A/H11N9) segment 1 (PB2)3995.40.000000e+002241/2280 (98%)EPI418826A/northern shoveler/Illinois/10OS3619/2010 (A/H11N9) segment 1 (PB2)3995.40.000000e+002241/2280 (98%)EPI296761A/mallard/Alberta/128/2006 (A/H1N1) segment 1 (PB2)3995.40.000000e+002241/2280 (98%)EPI166118A/mallard/Minnesota/Sg-00169/2007 (A/H3N8) segment 1 (PB2)3995.40.000000e+002219/2247 (98%)EPI616314A/northern shoveler/Illinois/12OS4951/2012 (A/H7N3) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI595926A/mallard/Maryland/09OS254/2009 (A/H1N1) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI512342A/mallard/Wisconsin/11OS4493/2011 (A/H1N3) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI468388A/mallard/Missouri/466554-14/2007 (A/H1N1) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI453954A/mallard/Interior Alaska/10BM11311R0/2010 (A/H3N8) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI449713A/mallard/Minnesota/AI09-1684/2009 (A/H1N1) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI449706A/mallard/Minnesota/AI09-1678/2009 (A/H1N1) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI449514A/green-winged teal/Minnesota/Sg-00841/2008 (A/H0) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI449362A/mallard/Minnesota/SG-00932/2008 (A/H6N1) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI420088A/mallard/California/2584V/2011 (A/H4N9) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI419815A/mallard/California/2532V/2011 (A/H4N6) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI419143A/northern shoveler/Mississippi/10OS4526/2010 (A/H6N2) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI419116A/gadwall/Mississippi/10OS4531/2010 (A/H6N2) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI333881A/blue-winged teal/Wisconsin/2649/2009 (A/H6N1) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI299482A/gadwall/Wisconsin/08OS2296/2008 (A/H6N2) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI188187A/mallard/Minnesota/Sg-00462/2008 (A/H6N1) segment 1 (PB2)3989.90.000000e+002240/2280 (98%)EPI298233A/mallard/Minnesota/Sg-00223/2007 (A/H6N1) segment 1 (PB2)3988.00.000000e+002222/2253 (98%)EPI188713A/mallard/Minnesota/Sg-00692/2008 (A/H2N3) segment 1 (PB2)3988.00.000000e+002227/2261 (98%)EPI154747A/mallard duck/Minnesota/Sg-00105/2007 (A/H6N1) segment 1 (PB2)3988.00.000000e+002217/2246 (98%)EPI154715A/blue-winged teal/Texas/Sg-00081/2007 (A/H4N6) segment 1 (PB2)3988.00.000000e+002217/2246 (98%)EPI689545A/American green winged teal/Texas/A00586649/2009 (A/H7N3) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI689521A/American green winged teal/Colorado/A00660616/2008 (A/H7N3) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI442129A/emperor goose/Alaska/44300-287/2007 (A/H1N2) segment 1 (PB2)3984.30.000000e+002226/2261 (98%)EPI420129A/mallard/California/2594V/2011 (A/H4N6) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI420122A/mallard/California/2594P/2011 (A/H4N6) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI420115A/mallard/California/2590V/2011 (A/H4N6) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI420081A/mallard/California/2584P/2011 (A/H4N9) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI419525A/American green-winged teal/Mississippi/11OS255/2011 (A/H7N7) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI418556A/northern pintail/Mississippi/10OS4521/2010 (A/H0) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI413395A/mallard/Ohio/10OS1470/2010 (A/H3N2) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI413388A/mallard/Ohio/10OS1469/2010 (A/H3N2) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI387293A/mallard/California/1335-1/2010 (A/H10) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI387286A/mallard/California/1335/2010 (A/H10) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI333825A/gadwall/Illinois/3860/2009 (A/H6N1) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI328528A/American wigeon/California/8547/2008 (A/H6N1) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI328231A/mallard/California/8293/2008 (A/H6N1) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI328191A/mallard/California/8432/2008 (A/H6N1) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI188155A/northern pintail/South Dakota/Sg-00454/2008 (A/H6N5) segment 1 (PB2)3984.30.000000e+002239/2280 (98%)EPI166244A/mallard/Minnesota/Sg-00223/2007 (A/H6N1) segment 1 (PB2)3984.30.000000e+002217/2247 (98%)EPI188677A/mallard/Minnesota/Sg-00683/2008 (A/H3N8) segment 1 (PB2)3982.50.000000e+002226/2261 (98%)EPI188662A/mallard/Minnesota/Sg-00679/2008 (A/H3N8) segment 1 (PB2)3982.50.000000e+002226/2261 (98%)EPI188634A/mallard/Minnesota/Sg-00672/2008 (A/H3N8) segment 1 (PB2)3982.50.000000e+002226/2261 (98%)EPI188194A/mallard/Minnesota/Sg-00464/2008 (A/H6N1) segment 1 (PB2)3980.70.000000e+002238/2280 (98%)EPI616057A/mallard/Ohio/12OS5582/2012 (A/H0) segment 1 (PB2)3978.80.000000e+002238/2280 (98%)EPI595723A/mallard/Maryland/08OS3111/2008 (A/H10N7) segment 1 (PB2)3978.80.000000e+002238/2280 (98%)EPI512430A/northern shoveler/Illinois/11OS5680/2011 (A/H11N9) segment 1 (PB2)3978.80.000000e+002238/2280 (98%)EPI419053A/mallard/Wisconsin/10OS2918/2010 (A/H4N6) segment 1 (PB2)3978.80.000000e+002238/2280 (98%)EPI419046A/mallard/Wisconsin/10OS2917/2010 (A/H4N6) segment 1 (PB2)3978.80.000000e+002238/2280 (98%)

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI616384A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI513049A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI512344A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI512875A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI420188A/bufflehead/California/3118/2011 (A/H4N8) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI689817A/mallard/Nebraska/A00709657/2009 (A/H7N3) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI689575A/American green winged teal/Texas/A00604814/2009 (A/H7N3) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI689568A/American green winged teal/Texas/A00604032/2009 (A/H7N3) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI689561A/American green winged teal/Texas/A00604029/2009 (A/H7N3) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI689548A/American green winged teal/Texas/A00604024/2009 (A/H7N3) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI449999A/lesser scaup/Louisiana/AI09-5204/2009 (A/H6N8) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI690043A/northern shoveler/Mississippi/A00682947/2008 (A/H7N7) segment 7 (MP)1759.10.000000e+00972/982 (98%)EPI419526A/American green-winged teal/Mississippi/11OS256/2011 (A/H1N1) segment 7 (MP)1759.10.000000e+00972/982 (98%)EPI689700A/blue winged teal/Texas/A00605473/2009 (A/H7N3) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI689645A/blue winged teal/Louisiana/A00557206/2009 (A/H7N7) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI376067A/mallard/California/1475/2010 (A/H3N8) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI327661A/mallard/California/1156/2010 (A/H4N6) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI689789A/mallard/Iowa/A00558620/2008 (A/H7N3) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI689689A/blue winged teal/Texas/A00676566/2009 (A/H7N3) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI616847A/blue-winged teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI449901A/blue-winged Teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI449736A/mallard/Minnesota/AI09-1867/2009 (A/H8N4) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI449729A/mallard/Minnesota/AI09-1854/2009 (A/H8N4) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI449722A/mallard/Minnesota/AI09-1833/2009 (A/H8N4) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI435155A/American black duck/New Brunswick/00867/2010 (A/H5N2) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI398693A/mallard/California/1154/2010 (A/H4N6) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI387273A/mallard/California/1297/2010 (A/H4N6) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI327669A/mallard/California/1154/2010 (A/H0) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI327653A/mallard/California/1210/2010 (A/H4N6) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI327637A/mallard/California/1188/2010 (A/H4N6) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI689833A/mallard/New York/A00723392/2009 (A/H7N3) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI689659A/blue winged teal/Minnesota/A00137660/2009 (A/H7N3) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI689487A/American black duck/Delaware/A00870108/2010 (A/H7N3) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI512964A/mallard/Illinois/11OS5582/2011 (A/H1N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI512947A/American green-winged teal/Illinois/11OS4814/2011 (A/H3N8) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476339A/blue-winged teal/Canada/3240/2011 (A/H4N6) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476272A/blue-winged teal/Canada/3241/2011 (A/H4N6) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476265A/blue-winged teal/Canada/3239/2011 (A/H4N6) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476258A/blue-winged teal/Canada/3237/2011 (A/H4N6) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476213A/thick-billed murre/Canada/1871/2011 (A/H1N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476150A/common eider/Maine/270/2011 (A/H1N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476143A/mallard/Maine/202/2011 (A/H1N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI476123A/bufflehead/Maine/161/2011 (A/H1N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI449328A/mallard/Minnesota/Sg-00804/2008 (A/H3N8) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI419167A/mallard/Wisconsin/10OS3866/2010 (A/H3N6) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI418971A/mallard/Wisconsin/10OS3169/2010 (A/H4N9) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI331963A/blue-winged teal/Guatemala/CIP049-06/2010 (A/H8N4) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI331955A/blue-winged teal/Guatemala/CIP049-12/2010 (A/H5N4) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI331947A/blue-winged teal/Guatemala/CIP049-13/2010 (A/H5N4) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI331939A/blue-winged teal/Guatemala/CIP049-14/2010 (A/H8N4) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI331915A/blue-winged teal/Guatemala/CIP049-15/2010 (A/H8N4) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI616449A/blue-winged teal/Illinois/12OS4788/2012 (A/H1N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI463748A/mallard/Minnesota/AI09-1714/2009 (A/H7N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI512992A/mallard/Wisconsin/11OS3092/2011 (A/H3N2) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI512985A/mallard/Wisconsin/11OS3079/2011 (A/H3N2) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI512919A/mallard/Wisconsin/11OS3106/2011 (A/H3N2) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI419062A/American green-winged teal/Wisconsin/10OS2955/2010 (A/H5N2) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI419055A/mallard/Wisconsin/10OS2945/2010 (A/H0) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI327629A/mallard/California/1289/2010 (A/H4N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI328420A/northern pintail/California/6495/2008 (A/H6N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI699389A/American green-winged teal/Interior Alaska/11BM00293/2011 (A/H10N5) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI699370A/American green-winged teal/Interior Alaska/11BM00304/2011 (A/H10N5) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI512209A/American green-winged teal/Mississippi/12OS405/2012 (A/H10N7) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI420253A/mallard/California/3569/2010 (A/H1N3) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI328317A/mallard/California/6420/2008 (A/H6N2) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI299195A/northern pintail/Interior Alaska/8BM3700/2008 (A/H3N8) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI220470A/env/California/7279/2008 (A/H2N3) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI159708A/turkey/CA/358533/2005 (A/H4N8) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI645489A/American green-winged teal/Wisconsin/13OS3465/2013 (A/H6N8) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI616170A/blue-winged teal/Ohio/12OS2138/2012 (A/H10N9) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI512233A/mallard/Arkansas/12OS184/2012 (A/H10N7) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI454938A/ruddy turnstone/New Jersey/AI06-582/2006 (A/H6N7) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI450079A/red-necked grebe/Minnesota/AI10-2530/2010 (A/H0) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI450071A/red-necked grebe/Minnesota/AI10-2529/2010 (A/H0) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI442481A/spectacled eider/Alaska/44173-055/2006 (A/H3N8) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI419704A/American wigeon/Missouri/10MO0530/2010 (A/H0) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI418727A/American green-winged teal/Wisconsin/10OS2767/2010 (A/H6N8) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI376081A/northern shoveler/California/3185/2010 (A/H0) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI369979A/mallard/Alberta/297/2007 (A/H2N9) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI334380A/mallard/Illinois/3048/2009 (A/H11N2) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI333743A/northern shovelerMissouri/141/2009 (A/H0) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI333607A/American green-winged teal/Mississippi/404/2010 (A/H0) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI300071A/northern pintail/Interior Alaska/8BM3696/2008 (A/H3N8) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI300064A/northern shoveler/Interior Alaska/8BM3671/2008 (A/H4N1) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI299727A/northern pintail/Interior Alaska/8BM3723/2008 (A/H4N1) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI299452A/northern shoveler/Mississippi/09OS643/2009 (A/H7N7) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI299203A/green-winged teal/Interior Alaska/8BM3706/2008 (A/H0) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI299027A/duck/Interior Alaska/7MP1582/2007 (A/H1N1) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI298340A/blue-winged teal/Louisiana/Sg-00189/2007 (A/H3N6) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI292834A/bufflehead/California/JN1016/2006 (A/H2N9) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI290758A/American green-winged teal/California/44287-395/2007 (A/H8N3) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI290696A/northern shoveler/Washington/44249-731/2006 (A/H10N7) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI280527A/mallard/Idaho/455398-2/2006 (A/H5N2) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI280519A/mallard/Washington/456277-7/2006 (A/H5N2) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI263207A/gadwall/Minnesota/Sg-00044/2007 (A/H3N8) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI225343A/pintail/Alberta/21/2006 (A/H1N1) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI220501A/env/California/7335/2008 (A/H2N3) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI220493A/env/California/7313/2008 (A/H2N3) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI220478A/env/California/7286/2008 (A/H2N3) segment 7 (MP)1714.80.000000e+00964/982 (98%)EPI183983A/ruddy turnstone/Delaware/752/2006 (A/H7N7) segment 7 (MP)1714.80.000000e+00964/982 (98%)

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI512876A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 6 (NA)2549.50.000000e+001402/1413 (99%)EPI512345A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 6 (NA)2549.50.000000e+001402/1413 (99%)EPI420189A/bufflehead/California/3118/2011 (A/H4N8) segment 6 (NA)2549.50.000000e+001402/1413 (99%)EPI450000A/lesser scaup/Louisiana/AI09-5204/2009 (A/H6N8) segment 6 (NA)2505.20.000000e+001394/1413 (98%)EPI334350A/bufflehead/Illinois/4016/2009 (A/H4N8) segment 6 (NA)2495.90.000000e+001391/1411 (98%)EPI154826A/bufflehead/California/HKWF205/2007 (A/H4N8) segment 6 (NA)2460.90.000000e+001386/1413 (98%)EPI418544A/mallard/Wisconsin/10OS3166/2010 (A/H0) segment 6 (NA)2453.50.000000e+001384/1412 (98%)EPI342994A/mallard/Alberta/507/2008 (A/H3N8) segment 6 (NA)2449.80.000000e+001384/1413 (97%)EPI513050A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 6 (NA)2436.90.000000e+001381/1412 (97%)EPI596199A/mallard/Maryland/13OS3020/2014 (A/H6N8) segment 6 (NA)2433.20.000000e+001381/1413 (97%)EPI234231A/blue-winged teal/North Dakota/Sg-00704/2008 (A/H3N8) segment 6 (NA)2429.50.000000e+001361/1384 (98%)EPI526433A/American green-winged teal/Ohio/13OS2094/2013 (A/H6N8) segment 6 (NA)2427.60.000000e+001380/1413 (97%)EPI615867A/willet/Peru-CH49/2010 (A/H6N8) segment 6 (NA)2425.80.000000e+001379/1412 (97%)EPI526391A/American green-winged teal/Ohio/13OS1781/2013 (A/H6N8) segment 6 (NA)2422.10.000000e+001379/1413 (97%)EPI526333A/American green-winged teal/Ohio/13OS2060/2013 (A/H6N8) segment 6 (NA)2422.10.000000e+001379/1413 (97%)EPI448654A/blue-winged teal/North Dakota/Sg-00719/2008 (A/H3N8) segment 6 (NA)2422.10.000000e+001379/1413 (97%)EPI234233A/blue-winged teal/North Dakota/Sg-00707/2008 (A/H4N8) segment 6 (NA)2420.20.000000e+001364/1391 (98%)EPI645418A/American green-winged teal/Ohio/13OS1840/2013 (A/H6N8) segment 6 (NA)2416.50.000000e+001378/1413 (97%)EPI343441A/mallard/Alberta/212/2006 (A/H3N8) segment 6 (NA)2416.50.000000e+001378/1413 (97%)EPI227374A/northern pintail/Alberta/11701/2005 (A/H3N8) segment 6 (NA)2411.00.000000e+001377/1413 (97%)EPI615874A/egret/Peru-CH50/2010 (A/H6N8) segment 6 (NA)2407.30.000000e+001369/1402 (97%)EPI343677A/mallard/Alberta/241/2004 (A/H3N8) segment 6 (NA)2405.50.000000e+001376/1413 (97%)EPI298668A/mallard/Interior Alaska/6MP0951/2006 (A/H3N8) segment 6 (NA)2405.50.000000e+001376/1413 (97%)EPI449527A/mallard/Minnesota/Sg-00860/2008 (A/H0) segment 6 (NA)2399.90.000000e+001376/1414 (97%)EPI343283A/mallard/Alberta/28/2007 (A/H3N8) segment 6 (NA)2399.90.000000e+001375/1413 (97%)EPI343275A/mallard/Alberta/34/2007 (A/H3N8) segment 6 (NA)2399.90.000000e+001375/1413 (97%)EPI343127A/mallard/Alberta/284/2007 (A/H0) segment 6 (NA)2399.90.000000e+001375/1413 (97%)EPI343043A/blue-winged teal/Alberta/387/2007 (A/H3N8) segment 6 (NA)2394.40.000000e+001374/1413 (97%)EPI298732A/mallard/Interior Alaska/6MP0972R1/2006 (A/H3N8) segment 6 (NA)2394.40.000000e+001374/1413 (97%)EPI298636A/mallard/Interior Alaska/6MP0272/2006 (A/H3N8) segment 6 (NA)2394.40.000000e+001374/1413 (97%)EPI298500A/green-winged teal/Interior Alaska/6MP0736/2006 (A/H3N8) segment 6 (NA)2394.40.000000e+001374/1413 (97%)EPI343452A/mallard/Alberta/190/2006 (A/H0) segment 6 (NA)2388.80.000000e+001373/1413 (97%)EPI343291A/mallard/Alberta/27/2007 (A/H3N8) segment 6 (NA)2388.80.000000e+001373/1413 (97%)EPI221422A/American green-winged teal/Interior Alaska/4/2007 (A/H3N8) segment 6 (NA)2388.80.000000e+001373/1413 (97%)EPI699696A/American green-winged teal/Interior Alaska/11BM03897/2011 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI699630A/American green-winged teal/Interior Alaska/11BM03657/2011 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI299575A/northern pintail/Interior Alaska/7MP0509/2007 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI299060A/northern pintail/Interior Alaska/7MP2228/2007 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI296892A/northern shoveler/Interior Alaska/7MP1765/2007 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI263358A/mallard/Minnesota/Sg-00064/2007 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI263094A/blue-winged teal/Minnesota/Sg-00037/2007 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI222187A/mallard/Interior Alaska/2/2007 (A/H3N8) segment 6 (NA)2383.30.000000e+001372/1413 (97%)EPI234236A/blue-winged teal/North Dakota/Sg-00719/2008 (A/H3N8) segment 6 (NA)2379.60.000000e+001356/1390 (97%)EPI449681A/ring-necked duck/Minnesota/Sg-01066/2008 (A/H12N8) segment 6 (NA)2377.80.000000e+001372/1414 (97%)EPI449478A/mallard/Minnesota/Sg-00824/2008 (A/H0) segment 6 (NA)2377.80.000000e+001372/1414 (97%)EPI343109A/mallard/Alberta/318/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI342942A/mallard/Alberta/551/2009 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI299044A/northern pintail/Interior Alaska/7MP1822/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001372/1414 (97%)EPI296957A/American widgeon/Interior Alaska/7MP1707/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI296900A/northern shoveler/Interior Alaska/7MP0944/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI283597A/surface water/Minnesota/W07-2241/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI263398A/ring-necked duck/Minnesota/Sg-00069/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI263334A/mallard/Minnesota/Sg-00061/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI263262A/mallard/Minnesota/Sg-00051/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI263238A/mallard/Minnesota/Sg-00048/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI263230A/mallard/Minnesota/Sg-00047/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI263206A/gadwall/Minnesota/Sg-00044/2007 (A/H3N8) segment 6 (NA)2377.80.000000e+001371/1413 (97%)EPI178641A/northern shoveler/Interior Alaska/3/2007 (A/H3N8) segment 6 (NA)2374.10.000000e+001369/1411 (97%)EPI595705A/mallard/Maryland/08OS3097/2008 (A/H10N8) segment 6 (NA)2372.20.000000e+001370/1413 (96%)EPI442452A/greater white-fronted goose/Alaska/44299-055/2007 (A/H3N8) segment 6 (NA)2372.20.000000e+001370/1413 (96%)EPI299204A/green-winged teal/Interior Alaska/8BM3706/2008 (A/H0) segment 6 (NA)2372.20.000000e+001370/1413 (96%)EPI299196A/northern pintail/Interior Alaska/8BM3700/2008 (A/H3N8) segment 6 (NA)2372.20.000000e+001370/1413 (96%)EPI225292A/mallard/Washington/20010-002/2006 (A/H3N8) segment 6 (NA)2372.20.000000e+001370/1413 (96%)EPI442451A/greater white-fronted goose/Alaska/44299-054/2007 (A/H3N8) segment 6 (NA)2370.40.000000e+001369/1412 (96%)EPI699131A/mallard/Interior Alaska/12ML00098/2012 (A/H3N8) segment 6 (NA)2366.70.000000e+001369/1413 (96%)EPI450043A/mallard/Arkansas/AI09-5944/2009 (A/H4N8) segment 6 (NA)2366.70.000000e+001369/1413 (96%)EPI449987A/blue-winged teal/Texas/AI09-4463/2009 (A/H4N8) segment 6 (NA)2366.70.000000e+001369/1413 (96%)EPI418513A/ruddy duck/Wisconsin/10OS3191/2010 (A/H3N8) segment 6 (NA)2366.70.000000e+001369/1413 (96%)EPI343315A/mallard/Alberta/279/2006 (A/H3N8) segment 6 (NA)2366.70.000000e+001369/1413 (96%)EPI342923A/pintail/Alberta/207/1999 (A/H0) segment 6 (NA)2366.70.000000e+001370/1414 (96%)EPI328504A/bufflehead/California/8522/2008 (A/H4N8) segment 6 (NA)2366.70.000000e+001369/1413 (96%)EPI263318A/mallard/Minnesota/Sg-00059/2007 (A/H3N8) segment 6 (NA)2366.70.000000e+001369/1413 (96%)EPI87760A/pintail/Alberta/207/1999 (A/H4N8) segment 6 (NA)2366.70.000000e+001370/1414 (96%)EPI450037A/mallard/Arkansas/AI09-5900/2009 (A/H3N8) segment 6 (NA)2361.10.000000e+001368/1413 (96%)EPI449786A/mallard/Minnesota/AI09-2571/2009 (A/H3N8) segment 6 (NA)2361.10.000000e+001369/1414 (96%)EPI402982A/mallard/Alberta/215/1999 (A/H0) segment 6 (NA)2361.10.000000e+001369/1414 (96%)EPI328645A/mallard/California/11032/2008 (A/H0N8) segment 6 (NA)2361.10.000000e+001368/1413 (96%)EPI526445A/American green-winged teal/Ohio/13OS2108/2013 (A/H3N8) segment 6 (NA)2355.60.000000e+001367/1413 (96%)EPI526376A/blue-winged teal/Ohio/13OS2018/2013 (A/H3N8) segment 6 (NA)2355.60.000000e+001367/1413 (96%)EPI449809A/blue-winged Teal/Minnesota/AI09-2977/2009 (A/H4N8) segment 6 (NA)2355.60.000000e+001368/1414 (96%)EPI448667A/mallard/North Dakota/Sg-00737/2008 (A/H6N8) segment 6 (NA)2355.60.000000e+001368/1414 (96%)EPI437063A/northern pintail/Interior Alaska/9BM12153R0/2009 (A/H4N8) segment 6 (NA)2355.60.000000e+001367/1413 (96%)EPI328590A/northern shoveler/California/9235/2008 (A/H10N8) segment 6 (NA)2355.60.000000e+001367/1413 (96%)EPI290783A/teal/Oregon/44336-130/2007 (A/H3N8) segment 6 (NA)2355.60.000000e+001367/1413 (96%)EPI290577A/northern pintail/Oregon/44249-559/2006 (A/H3N8) segment 6 (NA)2355.60.000000e+001368/1414 (96%)EPI290775A/American green-winged teal/Oregon/44336-124/2007 (A/H3N8) segment 6 (NA)2353.80.000000e+001357/1398 (97%)EPI526340A/American green-winged teal/Ohio/13OS2106/2013 (A/H3N8) segment 6 (NA)2350.10.000000e+001366/1413 (96%)EPI448479A/mallard/Minnesota/346256/2000 (A/H0) segment 6 (NA)2350.10.000000e+001368/1415 (96%)EPI387233A/mallard/California/3188/2010 (A/H6N8) segment 6 (NA)2350.10.000000e+001366/1413 (96%)EPI344280A/lesser scaup/Alberta/206/1995 (A/H3N8) segment 6 (NA)2350.10.000000e+001367/1414 (96%)EPI298956A/American wigeon/Interior Alaska/7MP1726/2007 (A/H3N8) segment 6 (NA)2350.10.000000e+001366/1413 (96%)EPI296973A/mallard/Interior Alaska/7MP1700/2007 (A/H3N8) segment 6 (NA)2350.10.000000e+001366/1413 (96%)EPI238106A/mallard/Minnesota/448/2000 (A/H3N8) segment 6 (NA)2350.10.000000e+001368/1415 (96%)EPI442450A/greater white-fronted goose/Alaska/44299-002/2007 (A/H3N8) segment 6 (NA)2346.40.000000e+001354/1396 (96%)EPI512948A/American green-winged teal/Illinois/11OS4814/2011 (A/H3N8) segment 6 (NA)2344.50.000000e+001365/1413 (96%)EPI238511A/mallard/Minnesota/190/1999 (A/H3N8) segment 6 (NA)2344.50.000000e+001367/1415 (96%)EPI222337A/northern pintail/Alaska/7MP0508/2007 (A/H3N8) segment 6 (NA)2344.50.000000e+001365/1413 (96%)EPI178610A/northern shoveler/Interior Alaska/2/2007 (A/H3N8) segment 6 (NA)2344.50.000000e+001365/1413 (96%)EPI22171A/mallard/Alberta/215/99 (A/H6N8) segment 6 (NA)2342.70.000000e+001363/1410 (96%)EPI298980A/northern pintail/Interior Alaska/7MP0408/2007 (A/H3N8) segment 6 (NA)2339.00.000000e+001364/1413 (96%)

DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI645556A/blue-winged teal/Iowa/13OS2316/2013 (A/H7N3) segment 4 (HA)2937.30.000000e+001652/1683 (98%)EPI594839A/mallard/Maryland/13OS3019/2014 (A/H0) segment 4 (HA)2909.60.000000e+001647/1683 (97%)EPI526172A/blue-winged teal/Ohio/13OS2037/2013 (A/H7N1) segment 4 (HA)2904.10.000000e+001646/1683 (97%)EPI419496A/American green-winged teal/Mississippi/11OS247/2011 (A/H0) segment 4 (HA)2821.00.000000e+001631/1683 (96%)EPI413380A/mallard/Missouri/10MO0551/2010 (A/H7N7) segment 4 (HA)2798.80.000000e+001627/1683 (96%)EPI689616A/blue winged teal/Minnesota/A00137660/2009 (A/H7N3) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI419540A/American green-winged teal/Mississippi/11OS259/2011 (A/H0) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI419497A/American green-winged teal/Mississippi/11OS250/2011 (A/H7N3) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI419085A/American black duck/Wisconsin/10OS3949/2010 (A/H7N8) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI418762A/American green-winged teal/Illinois/10OS3368/2010 (A/H7N7) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI418759A/American green-winged teal/Illinois/10OS3329/2010 (A/H7N7) segment 4 (HA)2793.30.000000e+001626/1683 (96%)EPI616891A/mallard/Alberta/590/2010 (A/H7N8) segment 4 (HA)2787.70.000000e+001625/1683 (96%)EPI418597A/northern shoveler/Arkansas/11OS333/2011 (A/H0) segment 4 (HA)2787.70.000000e+001625/1683 (96%)EPI419446A/northern shoverl/Mississippi/11OS145/2011 (A/H7N9) segment 4 (HA)2782.20.000000e+001624/1683 (96%)EPI419234A/northern shoveler/Missouri/10OS4750/2010 (A/H7N3) segment 4 (HA)2782.20.000000e+001624/1683 (96%)EPI419498A/American green-winged teal/Mississippi/11OS255/2011 (A/H7N7) segment 4 (HA)2776.60.000000e+001623/1683 (96%)EPI418570A/northern shoveler/Arkansas/11OS171/2011 (A/H0) segment 4 (HA)2776.60.000000e+001623/1683 (96%)EPI419184A/northern shoveler/Missouri/10OS4700/2010 (A/H0) segment 4 (HA)2771.10.000000e+001622/1683 (96%)EPI419181A/northern shoveler/Missouri/10OS4632/2010 (A/H7N7) segment 4 (HA)2771.10.000000e+001622/1683 (96%)EPI616787A/blue-winged teal/Texas/AI12-909/2012 (A/H7N1) segment 4 (HA)2765.60.000000e+001621/1683 (96%)EPI419703A/American wigeon/Missouri/10MO0530/2010 (A/H0) segment 4 (HA)2765.60.000000e+001621/1683 (96%)EPI419542A/northern shoveler/Mississippi/11OS202/2011 (A/H7N7) segment 4 (HA)2765.60.000000e+001622/1684 (96%)EPI419233A/gadwall/Missouri/10OS4731/2010 (A/H7N3) segment 4 (HA)2765.60.000000e+001621/1683 (96%)EPI689523A/American green winged teal/Mississippi/A00630203/2009 (A/H7N6) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI419543A/northern shoveler/Mississippi/11OS289/2011 (A/H7N3) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI299451A/northern shoveler/Mississippi/09OS643/2009 (A/H7N7) segment 4 (HA)2760.00.000000e+001620/1683 (96%)EPI690006A/northern shoveler/Mississippi/A00602284/2009 (A/H0) segment 4 (HA)2754.50.000000e+001619/1683 (96%)EPI690005A/northern shoveler/Louisiana/A00557321/2009 (A/H7N3) segment 4 (HA)2754.50.000000e+001619/1683 (96%)EPI689614A/blue winged teal/Louisiana/A00557206/2009 (A/H7N7) segment 4 (HA)2754.50.000000e+001619/1683 (96%)EPI512246A/northern shoveler/Mississippi/12OS231/2012 (A/H0) segment 4 (HA)2754.50.000000e+001619/1683 (96%)EPI487352A/guinea fowl/Nebraska/17096/2011 (A/H7N9) segment 4 (HA)2754.50.000000e+001620/1684 (96%)EPI487328A/goose/Nebraska/17097/2011 (A/H7N9) segment 4 (HA)2754.50.000000e+001620/1684 (96%)EPI399915A/goose/Nebraska/17097-4/2011 (A/H7N9) segment 4 (HA)2754.50.000000e+001620/1684 (96%)EPI299347A/American green-winged teal/Mississippi/09OS046/2009 (A/H7N7) segment 4 (HA)2754.50.000000e+001619/1683 (96%)EPI690008A/northern shoveler/Mississippi/A00682947/2008 (A/H7N7) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI689690A/bufflehead/Virginia/A00120022/2008 (A/H7N2) segment 4 (HA)2748.90.000000e+001618/1683 (96%)EPI399917A/guinea fowl/Nebraska/17096-1/2011 (A/H7N9) segment 4 (HA)2748.90.000000e+001619/1684 (96%)EPI689774A/mallard/New Jersey/A00122457/2008 (A/H7N8) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI616857A/blue-winged teal/Louisiana/AI11-2911/2011 (A/H7N3) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI616845A/blue-winged teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI512215A/northern pintail/Mississippi/12OS420/2012 (A/H0) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI512201A/American green-winged teal/Mississippi/12OS397/2012 (A/H7N7) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI449900A/blue-winged Teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI418798A/American green-winged teal/Illinois/10OS4014/2010 (A/H7N3) segment 4 (HA)2743.40.000000e+001617/1683 (96%)EPI585179A/redhead/Ohio/13OS0406/2013 (A/H7N3) segment 4 (HA)2737.90.000000e+001616/1683 (96%)EPI512431A/northern shoveler/Illinois/11OS4404/2011 (A/H7N3) segment 4 (HA)2737.90.000000e+001617/1684 (96%)EPI512194A/northern shoveler/Mississippi/12OS362/2012 (A/H7N7) segment 4 (HA)2737.90.000000e+001616/1683 (96%)EPI512180A/northern shoveler/Mississippi/12OS347/2012 (A/H7N7) segment 4 (HA)2737.90.000000e+001616/1683 (96%)EPI487317A/turkey/Minnesota/32710/2011 (A/H7N9) segment 4 (HA)2737.90.000000e+001617/1684 (96%)EPI487309A/turkey/Minnesota/31900/2011 (A/H7N9) segment 4 (HA)2737.90.000000e+001617/1684 (96%)EPI689773A/mallard/Nebraska/A00709657/2009 (A/H7N3) segment 4 (HA)2732.30.000000e+001616/1684 (95%)EPI689619A/blue winged teal/South Dakota/A00772794/2009 (A/H7N7) segment 4 (HA)2732.30.000000e+001615/1683 (95%)EPI512299A/northern shoveler/Arkansas/12OS158/2012 (A/H7N1) segment 4 (HA)2732.30.000000e+001615/1683 (95%)EPI569396A/blue-winged teal/LA/AI11-2911/2011 (A/H7N3) segment 4 (HA)2730.50.000000e+001609/1675 (96%)EPI689831A/mallard/New Jersey/A00926089/2010 (A/H7N3) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI616382A/northern shoveler/Illinois/12OS4951/2012 (A/H7N3) segment 4 (HA)2726.80.000000e+001614/1683 (95%)EPI463745A/mallard/Minnesota/AI09-1714/2009 (A/H7N1) segment 4 (HA)2723.10.000000e+001613/1683 (95%)EPI689769A/mallard/Iowa/A00558620/2008 (A/H7N3) segment 4 (HA)2721.20.000000e+001614/1684 (95%)EPI689688A/blue winged teal/Texas/A00605473/2009 (A/H7N3) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI689550A/American green winged teal/Texas/A00604814/2009 (A/H7N3) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI689549A/American green winged teal/Texas/A00604032/2009 (A/H7N3) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI689546A/American green winged teal/Texas/A00604024/2009 (A/H7N3) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI418896A/common goldeneye/Wisconsin/10OS4202/2010 (A/H7N6) segment 4 (HA)2721.20.000000e+001613/1683 (95%)EPI689707A/blue winged teal/Texas/A00676566/2009 (A/H7N3) segment 4 (HA)2715.70.000000e+001612/1683 (95%)EPI689522A/American green winged teal/Mississippi/A00468514/2009 (A/H7N7) segment 4 (HA)2715.70.000000e+001612/1683 (95%)EPI526461A/American green-winged teal/Wisconsin/13OS3468/2013 (A/H7N3) segment 4 (HA)2715.70.000000e+001612/1683 (95%)EPI689547A/American green winged teal/Texas/A00604029/2009 (A/H7N3) segment 4 (HA)2710.20.000000e+001611/1683 (95%)EPI434477A/mallard/Nova Scotia/00372/2010 (A/H7N7) segment 4 (HA)2710.20.000000e+001611/1683 (95%)EPI434430A/American black duck/New Brunswick/00344/2010 (A/H7N7) segment 4 (HA)2710.20.000000e+001611/1683 (95%)EPI434481A/green-winged teal/New Brunswick/00392/2010 (A/H7N7) segment 4 (HA)2704.60.000000e+001610/1683 (95%)EPI616037A/northern shoveler/Ohio/12OS5539/2012 (A/H7N3) segment 4 (HA)2699.10.000000e+001609/1683 (95%)EPI616030A/American green-winged teal/Ohio/12OS5538/2012 (A/H7N3) segment 4 (HA)2693.50.000000e+001608/1683 (95%)EPI645360A/American green-winged teal/Ohio/13OS1769/2013 (A/H7N2) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI645353A/blue-winged teal/Ohio/13OS1770/2013 (A/H7N3) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI526457A/blue-winged teal/Ohio/13OS1773/2013 (A/H7N3) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI526270A/American green-winged teal/Ohio/13OS1777/2013 (A/H7N3) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI487934A/turkey/Minnesota/20400/2009 (A/H7N9) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI487926A/turkey/Minnesota/18421/2009 (A/H7N9) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI487918A/turkey/Minnesota/15591/2009 (A/H7N9) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI487295A/turkey/Minnesota/14135-2/2009 (A/H7N9) segment 4 (HA)2682.50.000000e+001607/1684 (95%)EPI333728A/mallard/Missouri/220/2009 (A/H7N3) segment 4 (HA)2682.50.000000e+001606/1683 (95%)EPI690004A/northern pintail/Texas/A00466052/2009 (A/H7N3) segment 4 (HA)2676.90.000000e+001606/1684 (95%)EPI689871A/mallard/Oklahoma/A00744383/2009 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI689771A/mallard/Michigan/A00869519/2009 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI689739A/mallard/Illinois/A00325439/2009 (A/H7N3) segment 4 (HA)2676.90.000000e+001605/1683 (95%)EPI616996A/mallard/Alberta/192/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001606/1684 (95%)EPI616983A/mallard/Alberta/167/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001606/1684 (95%)EPI414400A/northern pintail/Interior Alaska/10BM02539R0/2010 (A/H7N3) segment 4 (HA)2676.90.000000e+001606/1684 (95%)EPI690010A/northern shoveler/Oklahoma/A00744384/2009 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI689838A/mallard/Oklahoma/A00749161/2009 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI689767A/mallard/Illinois/A00755320/2009 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI487910A/turkey/Minnesota/14659/2009 (A/H7N9) segment 4 (HA)2671.40.000000e+001605/1684 (95%)EPI487303A/turkey/Minnesota/31676/2009 (A/H7N9) segment 4 (HA)2671.40.000000e+001606/1685 (95%)EPI451949A/northern pintail/Interior Alaska/10BM11038R0/2010 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI451921A/northern pintail/Interior Alaska/10BM11366R0/2010 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI451788A/northern pintail/Interior Alaska/10BM09481R0/2010 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI451760A/mallard/Interior Alaska/10BM09539R0/2010 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI451753A/mallard/Interior Alaska/10BM09528R0/2010 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI451746A/northern pintail/Interior Alaska/10BM09348R0/2010 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)EPI451739A/northern pintail/Interior Alaska/10BM09347R0/2010 (A/H7N3) segment 4 (HA)2671.40.000000e+001604/1683 (95%)

LOCUS KU585908 1696 bp cRNA linear VRL 10-FEB-2016 DEFINITION Influenza A virus (A/turkey/Indiana/16-001573-2/2016(H7N8)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KU585908 VERSION KU585908.1 GI:985701787 KEYWORDS . SOURCE Influenza A virus (A/turkey/Indiana/16-001573-2/2016(H7N8)) ORGANISM Influenza A virus (A/turkey/Indiana/16-001573-2/2016(H7N8)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1696) AUTHORS Killian,M.L., Hines,N.L. and Torchetti,M. TITLE Direct Submission JOURNAL Submitted (25-JAN-2016) Diagnostic Virology Laboratory, National Veterinary Services Laboratories (NVSL), USDA APHIS VS, 1920 Dayton Avenue, Ames, IA 50010, USA COMMENT GenBank Accession Numbers KU585905-KU585912 represent sequences from the 8 segments of Influenza A virus (A/turkey/Indiana/16-001573-2/2016(H7N8)). ##Assembly-Data-START## Assembly Method :: SeqMan NGen v. v4 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1696 /organism="Influenza A virus (A/turkey/Indiana/16-001573-2/2016(H7N8))" /mol_type="viral cRNA" /strain="A/turkey/Indiana/16-001573-2/2016" /serotype="H7N8" /isolation_source="OP swab; pooled sample" /host="turkey; commercial" /db_xref="taxon:1785958" /segment="4" /country="USA: Daviess County, Indiana" /collection_date="15-Jan-2016" /note="NVSL 16-001573-2; EP1; LPAI" gene 7..1689 /gene="HA" CDS 7..1689 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="AMD38724.1" /db_xref="GI:985701788" /translation="MNTQILALIACMLIGAKGDKICLGHHAVANGTKVNTLTERGIEV VNATETVETANIKKICTQGKRPTDLGQCGLLGTLIGPPQCDQFLEFDADLIIERREGT DVCYPGKFTNKESLRQILRGSGGIDKESMGFTYSGIRTNGATSACRRSGSSFYAEMKW LLSNSDNAAFPQMTKSYRNPRSKPALIIWGVHHSGSVTEQTKLYGSGNKLITVGSSKY QQSFTPSPGARPQVNGQSGRIDFHWLLLDPNDTVTFTFNGAFIAPDRASFLRGESLGV QSDVPLDSSCKGDCFHNGGTIVSSLPFQNINPRTVGKCPRYVKQTSLLLATGMRNVPE NPKTRGLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLN RLIDKTNQQFELIDNEFSEIEQQIGNVINWTRDSMTEVWSYNAELLVAMENQHTIDLA DSEMNKLYERVRKQMRENAEEDGTGCFEIFHKCDDQCMESIRNNTYDHTQYRAESLQK RIQIDPVKLSSGYKDIILWFSFGASCFLLLAIAMGLVFICIKNGNMRCTICI" sig_peptide 7..60 /gene="HA" mat_peptide 61..1023 /gene="HA" /product="HA1" mat_peptide 1024..1686 /gene="HA" /product="HA2" ORIGIN 1 tacaaaatga acactcaaat tttggcactc attgcttgta tgctgatcgg agctaaagga 61 gacaaaatat gtcttgggca ccatgctgtg gcaaatggaa caaaagtgaa cacactaaca 121 gagagaggaa tcgaagtagt aaatgccaca gaaacggtgg agactgcaaa tattaagaaa 181 atatgcactc aggggaaaag accaacagat ctgggacaat gcggacttct aggaacccta 241 ataggacctc cccaatgcga tcaattcctg gagtttgacg ctgatttaat aattgaacgg 301 agagaaggaa cggatgtgtg ttatcctggg aagttcacaa ataaagaatc actgaggcag 361 atcctccgag ggtcaggagg aattgataag gaatcaatgg gtttcactta tagtggaata 421 agaaccaatg gggcaacgag tgcttgcaga agatcaggtt cttccttcta tgcggagatg 481 aagtggttat tgtcgaattc agacaatgcg gcttttcccc aaatgactaa gtcgtacaga 541 aatcccagga gcaaaccagc tctaataatt tggggagtgc atcactctgg atcggttact 601 gaacagacca aactctatgg gagtggaaac aagttgataa cagtaggaag ctcgaaatac 661 cagcagtcat tcaccccaag cccgggggca cgaccacagg tgaatgggca atcaggaagg 721 attgattttc attggctact ccttgacccc aacgacacag tgactttcac tttcaatggg 781 gcattcatag ctcctgacag agcaagtttc cttagagggg agtcactagg agttcaaagt 841 gacgttcctt tggattctag ttgcaagggg gattgcttcc acaatggagg tacgatagtg 901 agctcactgc cattccagaa catcaaccct agaacagtgg gaaaatgccc tcgatatgtc 961 aaacagacaa gcctcctctt ggctacaggg atgaggaacg tcccagagaa ccccaagacc 1021 agaggtcttt ttggagcgat tgctggattc atagagaatg ggtgggaagg cctcattgat 1081 ggatggtacg gtttcaggca tcaaaatgca caaggagaag gtactgcagc tgattacaaa 1141 agcactcaat ctgcaataga tcagatcaca ggcaaattga atcgtctaat tgacaaaaca 1201 aatcagcagt ttgaactgat agacaacgaa ttcagtgaaa tagaacaaca gattgggaat 1261 gtcattaatt ggacacgaga ttcaatgact gaagtatggt cgtataatgc tgaactgctg 1321 gtagctatgg aaaatcagca cacaatagat cttgcagact cagaaatgaa caaactttac 1381 gagcgtgtaa ggaaacaaat gagggagaat gctgaagagg atgggactgg atgctttgag 1441 atattccata agtgtgatga tcaatgcatg gagagcataa ggaacaacac ctacgaccat 1501 acccaataca gagcagagtc attgcagaag agaatacaga tagacccagt gaaactgagt 1561 agtggataca aagacataat cttatggttt agcttcgggg catcatgttt tcttcttcta 1621 gccattgcaa tgggattggt cttcatttgc ataaagaatg gaaacatgcg gtgcactatt 1681 tgtatatagt ttgaga

LOCUS KU558906 1705 bp cRNA linear VRL 10-FEB-2016 DEFINITION Influenza A virus (A/turkey/Indiana/16-001403-1/2016(H7N8)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KU558906 VERSION KU558906.1 GI:985701747 KEYWORDS . SOURCE Influenza A virus (A/turkey/Indiana/16-001403-1/2016(H7N8)) ORGANISM Influenza A virus (A/turkey/Indiana/16-001403-1/2016(H7N8)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1705) AUTHORS Killian,M.L. TITLE Direct Submission JOURNAL Submitted (20-JAN-2016) Diagnostic Virology Laboratory, National Veterinary Services Laboratories (NVSL), USDA APHIS VS, 1920 Dayton Avenue, Ames, IA 50010, USA COMMENT GenBank Accession Numbers KU558903-KU558910 represent sequences from the 8 segments of Influenza A virus (A/turkey/Indiana/16-001403-1/2016(H7N8)). ##Assembly-Data-START## Assembly Method :: SeqMan NGen v. v4 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1705 /organism="Influenza A virus (A/turkey/Indiana/16-001403-1/2016(H7N8))" /mol_type="viral cRNA" /strain="A/turkey/Indiana/16-001403-1/2016" /serotype="H7N8" /isolation_source="OP swab; pooled sample" /host="turkey; commercial; 19 week old tom" /db_xref="taxon:1783443" /segment="4" /country="USA: Dubois County, Indiana" /collection_date="14-Jan-2016" /note="NVSL 16-001403-1; EP1; HPAI" gene 7..1698 /gene="HA" CDS 7..1698 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="AMD38700.1" /db_xref="GI:985701748" /translation="MNTQILALIACMLIGAKGDKICLGHHAVANGTKVNTLTERGIEV VNATETVETANIKKICTQGKRPTDLGQCGLLGTLIGPPQCDQFLEFDADLIIERREGT DVCYPGKFTNKESLRQILRGSGGIDKESMGFTYSGIRTNGATSACRRSGSSFYAEMKW LLSNSDNAAFPQMTKSYRNPRSKPALIIWGVHHSGSVTEQTKLYGSGNKLITVGSSKY QQSFTPSPGARPQVNGQSGRIDFHWLLLDPNDTVTFTFNGAFIAPDRASFLRGESLGV QSDVPLDSSCKGDCFHNGGTIVSSLPFQNINPRTVGKCPRYVKQTSLLLATGMRNVPE NPKKRKTRGLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITG KLNRLIDKTNQQFELIDNEFSEIEQQIGNVINWTRDSMTEVWSYNAELLVAMENQHTI DLADSEMNKLYERVRKQLRENAEEDGTGCFEIFHKCDDQCMESIRNNTYDHTQYRAES LQNRIQIDPVKLSSGYKDIILWFSFGASCFLLLAIAMGLVFICIKNGNMRCTICI" sig_peptide 7..60 /gene="HA" mat_peptide 61..1032 /gene="HA" /product="HA1" mat_peptide 1033..1695 /gene="HA" /product="HA2" ORIGIN 1 tacaaaatga acactcaaat tttggcactc attgcttgta tgctgatcgg agctaaagga 61 gacaaaatat gtcttgggca ccatgctgtg gcaaatggaa caaaagtgaa cacactaaca 121 gagagaggaa tcgaagtggt aaatgccaca gaaacggtgg agactgcaaa tattaagaaa 181 atatgcactc aggggaaaag accaacagat ctgggacaat gcggacttct aggaacccta 241 ataggacctc cccaatgcga tcaattcctg gagtttgacg ctgatttaat aattgaacgg 301 agagaaggaa cggatgtgtg ttatcctggg aagttcacaa ataaagaatc actgaggcag 361 atcctccgag ggtcaggagg aattgataag gaatcaatgg gtttcactta tagtggaata 421 agaaccaatg gggcaacgag tgcttgcaga agatcaggtt cttccttcta tgcggagatg 481 aagtggttat tgtcgaattc agacaatgcg gcttttcccc aaatgactaa gtcgtacaga 541 aatcccagga gcaaaccagc tctaataatt tggggagtgc atcactctgg atcggttact 601 gaacagacca aactctatgg gagtggaaac aagttgataa cagtaggaag ctcgaaatac 661 cagcagtcat tcaccccaag cccgggggca cgaccacagg tgaatgggca atcaggaagg 721 attgattttc attggctact ccttgacccc aacgacacag tgactttcac tttcaatggg 781 gcattcatag ctcctgacag agcaagtttc cttagagggg agtcactagg agttcaaagt 841 gacgttcctt tggattctag ttgcaagggg gattgcttcc acaatggagg tacgatagtg 901 agctcactgc cattccagaa catcaaccct agaacagtgg gaaaatgccc tcgatatgtc 961 aaacagacaa gcctcctctt ggctacaggg atgaggaacg tcccagagaa ccccaaaaaa 1021 agaaagacca gaggtctttt tggagcgatt gctggattca tagagaatgg gtgggaaggc 1081 ctcattgatg gatggtacgg tttcaggcat caaaatgcac aaggagaagg tactgcagct 1141 gattacaaaa gcactcaatc tgcaatagat cagatcacag gcaaattgaa tcgtctaatt 1201 gacaaaacaa atcagcagtt tgaactgata gacaacgaat tcagtgaaat agaacaacag 1261 attgggaatg tcattaattg gacacgagat tcaatgactg aagtatggtc gtataatgct 1321 gaactgctgg tagctatgga aaatcagcac acaatagatc ttgcagactc agaaatgaac 1381 aaactttacg agcgtgtaag gaaacaactg agggagaatg ctgaagagga tgggactgga 1441 tgctttgaga tattccataa gtgtgatgat caatgcatgg agagcataag gaacaacacc 1501 tacgaccata cccaatacag agcagagtca ttgcagaata gaatacagat agacccagtg 1561 aaactgagta gtggatacaa agacataatc ttatggttta gcttcggggc atcatgtttt 1621 cttcttctag ccattgcaat gggattggtc ttcatttgca taaagaatgg aaacatgcgg 1681 tgcactattt gtatatagtt tgaga

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Zika case confirmed in MarylandBy Sarah Beth HensleyFebruary 11, 2016 4:41 pmShare WASHINGTON — There is one case of Zika in Maryland, state officials confirmed Thursday at a news conference. The Department of Health and Mental Hygiene says it is the state’s first confirmed case of the virus, which has been linked to birth defects in the Americas and is primarily spread through mosquito bites. Related StoriesZika virus has phones ringing at pest control, travel firmsHEALTHBabies’ eye damage and Zika? Brazil study suggests a linkHEALTHHealth department confirms 3 Zika cases in D.C.HEALTHZika virus confirmed in VirginiaHEALTHSexually-transmitted Zika case confirmed in TexasHEALTH The patient had traveled to a country where Zika transmission has been active, the department says. A blood test confirmed that the patient had Zika. The D.C. Department of Health confirmed three cases of Zika in the District. The Virginia Department of Health says it has one confirmed case in the commonwealth. “Our department will continue to actively partner with the [Centers for Disease Control and Prevention], Maryland healthcare providers, laboratories, and health departments to provide support to Marylanders at risk of Zika infection — especially to pregnant women,” Secretary Van T. Mitchell said in a news release. “As CDC guidance has evolved, we actually have expanded access to testing for people who had not met that agency’s initial testing criteria.” Earlier this month, health officials reported that a person in Texas became infected with the Zika virus through sex. Follow @WTOP on Twitter and WTOP on Facebook.

There is one case of Zika in Maryland, state officials confirmed Thursday at a news conference. The Department of Health and Mental Hygiene says it is the state’s first confirmed case of the virus, which has been linked to birth defects in the Americas and is primarily spread through mosquito bites. The patient had traveled to a country where Zika transmission has been active, the department says. A blood test confirmed that the patient had Zika. http://wtop.com/maryland/2016/02/zika-case-confirmed-in-maryland/

HEALTH ZIKA VIRUS OUTBREAK FEB 11 2016, 3:45 PM ETDid the Zika Virus Cost This Woman Her Baby?by MAGGIE FOX and JUDY SILVERMAN A health worker stands in the Sambadrome as he sprays insecticide to combat the Aedes aegypti mosquitoes that transmits the Zika virus in Rio de Janeiro, Brazil. Leo Correa / AP SHARE Samantha Mejia was elated when she discovered she was pregnant during a family visit to Honduras over the Christmas holiday. Less than two months later, she's lost the baby and she is wondering if Zika is to blame. Mejia, who lives in Romeoville, Illinois, tested positive for Zika after her visit, and says tests on the placenta from the pregnancy she lost show evidence of the virus. A spokesman for the Centers for Disease Control and Prevention told NBC News on Thursday that the placentas from two U.S. women who miscarried after visiting Zika-affected areas have tested positive for the virus. It doesn't prove the virus caused the miscarriages, but it adds to concern that the spread of Zika is a major threat to pregnant women. "It really could be a weird coincidence. Miscarriage is so common, it may not be Zika at all," Mejia told NBC. FacebookTwitterGoogle PlusEmbed Zika Virus on the move: How to protect yourself 3:22Zika's spreading across much of Latin America and the Caribbean and many more cases are expected. Health experts say the evidence is growing daily that the once-obscure and seemingly harmless virus is causing severe birth defects that can cause miscarriages, stillbirths or a lifetime of disability for babies that survive. CDC's reported more than 50 cases of U.S. travelers coming back with Zika. Last month, a baby born in Hawaii with a birth defect tested positive for Zika. "We're discovering more literally every day. This is a new phenomenon," CDC Director Dr. Tom Frieden told a Senate subcommittee hearing Thursday. "NOW I AM TRYING TO GET SOME PEACE. MAYBE THIS IS NATURE'S WAY OF TAKING CARE OF IT.""Right now, the most important thing for Americans to know is if you are pregnant, not to travel to a place where Zika is spreading." Mejia didn't know this when she and her husband Omar took off for his family's home in La Paz, in western Honduras. The warning hadn't even been issued yet. "When we were there a couple of years ago, they were talking about dengue," Mejia said. "They were talking about Zika this time, but we didn't think too much of it. I didn't hear much about pregnancy and microcephaly while I was there." Dengue virus is a close relative of Zika. Both are spread by the Aedes aegypti mosquito and until January, dengue was considered the much bigger threat. Norily Mejia de Cornejo of Honduras, who is five months pregnant and became infected with Zika in January. So far her ultrasounds look fine, but she is worried. Her sister-in-law, Samantha Mejia of Illinois, miscarried after visiting Honduras and the placenta has tested positive for the virus Family PhotoIn January, CDC scientists found evidence of Zika in the brains of two babies who died hours after birth in Brazil. They both also had microcephaly, a severe birth defect in which the brain is underdeveloped and the head is too small. Brazilian authorities had been saying they feared Zika was causing a rise in microcephaly, but the evidence was thin. As more and more babies and pregnancies and being tested, the evidence is getting much more substantial. On Wednesday, doctors in Slovenia detailed the case of a fetus with severe microcephaly that was aborted after the mother had symptoms of Zika. They found the virus in the very badly damaged brain. It's a smoking gun to the CDC. "The link to microcephaly is unprecedented," Frieden said. Mejia, a 30-year-old office manager, went in for testing when she started showing symptoms of Zika. "It was so mild," she said. "I stayed home one day feeling fluish, chills, very tired. Later that day, I felt much better, but next day I got a rash that spread across my entire body. That was when I was first alarmed -- maybe this is not the flu." These are classic symptoms of Zika, which is usually so mild that 80 percent of people never even realize they are infected. The rash is the most telltale symptom. This was all happening as alarm bells were just starting to go off around the world about Zika. "THAT'S WHEN WE LEARNED THERE WAS NO HEARTBEAT.""Once I knew it was Zika for sure, I spent some time talking with my (obstetrician)," Mejia said. She went for an ultrasound at nine weeks of pregnancy. "That's when we learned there was no heartbeat," Mejia said. "(My) doctor was very compassionate and told me that the miscarriage may not be Zika-related, because early miscarriage is so common. It might just be a coincidence," she added. "Now I am trying to get some peace. Maybe this is nature's way of taking care of it. Maybe this is what was supposed to happen. " Related: How Worried Should You Be About Zika? Frieden says it will take months to know for sure. Teams of scientists are studying pregnant women and babies in Brazil to see if those known to have been infected with Zika are more likely to have microcephaly than those who were not. They'll also follow hundreds of women in Colombia infected at different stages of pregnancy to see if and when anything happens to the babies. Cases like Mejia's help answer questions, also. "They did testing on the placenta," she said. "There was evidence of Zika virus in the placental tissue, but they couldn't say definitively if it was in the baby, as well. " But now there is another worry. "My sister in-law is pregnant right now, five months pregnant. She also contracted Zika while pregnant," Mejia said. Norily Mejia de Cornejo got sick in early January. "She is worried, hearing more reports about other defects, worried about other things besides Zika," Mejia said. Zika's also suspected of causing a rare but sometimes severe paralyzing condition called Guillain-Barre syndrome. "She is getting ultrasound and her doctor says everything looks normal, but s that still doesn't give you that much peace of mind. We are optimistic and praying." The World Health Organization has released advice for women who are pregnant and develop Zika but it doesn't offer many answers. Doctors don't yet know what the risk is to the unborn baby, or whether there's a way to know when in pregnancy is the most dangerous. FacebookTwitterGoogle PlusEmbed Obama Requests $1.8B From Congress to Fight Zika Virus1:43"Pregnant women infected with the Zika virus should seek counselling and antenatal care from a medical practitioner. WHO recommendations on this topic are currently under development," Who says. There's no treatment that can help protect the fetus and it's not easy to know for sure if a developing baby has microcephaly until late in the pregnancy. CDC and WHO both recommend that everyone in Zika zones protect themselves from mosquito bites by using insect repellant, wearing long sleeves and pants, getting rid of water where mosquitoes can breed and using screens and air conditioning. "Whether and when to become pregnant should be a personal decision, on the basis of full information and access to affordable, quality health services," WHO says. "Women should have access to a comprehensive range of contraceptive options. The range of contraceptives available should include long-acting, short-acting and permanent methods to meet women's individual preferences and needs. They include diaphragm, cervical cap, male condom, female condom, spermicidal foam, sponges and film." http://www.nbcnews.com/storyline/zika-virus-outbreak/did-zika-virus-cost-woman-her-baby-n516791 MAGGIE FOX

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