niman

APHIS released a full set of canine H3N2 sequences from Chicago which matches dog and cat sequences (avian origin) in Asia.

H5 Phylogenetic Tree of North American Sequences

Isolate County Collection Host A/turkey/Iowa/11762-1/2015 Buena Vista 12-Apr-2015 turkeys A/chicken/Iowa/04-20/2015 Osceola 20-Apr-2015 hens A/turkey/Iowa/13541-1/2015 Buena Vista 25-Apr-2015 42 week old hens A/chicken/Iowa/13542-2/2015 Osceola 25-Apr-2015 42 week old hens A/turkey/Iowa/14318-1/2015 Buena Vista 30-Apr-2015 16 week old turkeys A/chicken/Iowa/14399-4/2015 Madison 30-Apr-2015 98 week old hens A/turkey/Iowa/14319-1/2015 Cherokee 01-May-2015 7 week old turkeys A/chicken/Iowa/14322-6/2015 Buena Vista 01-May-2015 70 week old chickens A/chicken/Iowa/14589-1/2015 Sioux 04-May-2015 17 week old hens

APHIS has released a series of 8 sets of sequences from Iowa commercial farms from collections in April and May, 2015. The seven most recent isolates, collected between April 25 and May 4 from 5 Iowa counties from chicken and turkey farms form a novel H5N2 sub-clade.

Early Detection and Monitoring for Avian Influenzas of Significance in Wild Birds A U.S. Interagency Strategic Plan June 2015 http://www.aphis.usda.gov/animal_health/downloads/animal_diseases/ai/wild-bird-strategic-plan.pdf

USDA has released a wild bird surveillance plan updated in June, 2015.

Last Modified: Jul 2, 2015 PrintContact: Gail Keirn (970) 266-6007 Lyndsay Cole (970) 494-7410 July 2, 2015 – Today, the U.S. Department of Agriculture’s (USDA) Animal and Plant Health Inspection Service (APHIS) released two updated interagency plans related to the surveillance of avian influenza in wild birds. As part of USDA’s on-going preparation efforts for highly pathogenic avian influenza (HPAI), these updated plans will help USDA with further monitoring of wild birds for the HPAI virus during the fall migration. Between now and March 2016, HPAI surveillance in wild birds will increase as APHIS Wildlife Services biologists and their State partners collect approximately 41,000 samples from apparently healthy wild birds from targeted areas throughout the United States. The first updated plan— U.S. Interagency Strategic Plan for Early Detection and Monitoring for Avian Influenzas of Significance in Wild Birds—describes a unified national system for migratory wild bird sampling involving Federal, State, university and non-governmental organizations. The second updated plan— 2015 Surveillance Plan for Highly Pathogenic Avian Influenza in Waterfowl in the United States— outlines specific wild bird surveillance efforts for 2015-2016. These efforts were led by the Interagency Steering Committee for Surveillance for HPAI in Wild Birds. This committee is comprised of experts from USDA APHIS, the Department of the Interior’s U.S. Geological Survey and U.S. Fish and Wildlife Service, the U.S. Department of Health and Human Services’ Centers for Disease Control and Prevention (CDC) and the National Flyway Council. “The early detection of avian influenza remains key to controlling its spread and minimizing its effects,” said Dr. John Clifford, USDA chief veterinary officer. “Many of the activities outlined in these plans are already being implemented and help warn us of any re-assortments or changes in low or highly pathogenic avian influenza viruses in wild birds which could be detrimental to our domestic flocks.” Samples will be collected primarily from live-captured and hunter-harvested dabbling ducks, such as American black duck, American green-winged teal, mallard and Northern pintail. Additionally, environmental fecal samples from waterfowl and samples from morbidity and mortality events of all wild bird species also will be collected. Results from the surveillance effort will be incorporated into national risk assessments as well as preparedness and response planning efforts so that HPAI risks are reduced in commercial poultry, backyard poultry, game bird farms, wild birds, wild bird rehabilitation facilities, falconry birds, and captive bird collections in zoos/aviaries. Avian influenza viruses can be classified as HPAI or low pathogenic (LPAI) strains based on the severity of the illness they cause. LPAI typically causes only minor illness, and sometimes manifests no clinical signs. However, some LPAI virus strains are capable of mutating under field conditions into HPAI viruses. Wild birds can shed both LPAI and HPAI virus into the environment through their oral and nasal secretions and feces. Once in the environment, these viruses can infect backyard poultry through the environment or through direct contact with infected wild birds. Through breeches in biosecurity, HPAI viruses also can move from the environment into poultry facilities. Since December 2014, the USDA has confirmed cases of HPAI H5 in the Pacific, Central and Mississippi flyways (or migratory bird paths). The disease has been found in wild birds, as well as in more than 200 backyard and commercial poultry flocks. While wild dabbling ducks appear to have no ill effects from the virus, HPAI H5 is lethal to raptors and its impacts to other wild birds are unknown. HPAI H5 can cause severe disease and death in domestic birds. The CDC considers the risk to people from these HPAI H5 infections to be low. No human cases of these HPAI H5 viruses have been detected in the United States, Canada, or internationally. The United States has the strongest AI surveillance program in the world so that the food supply and our people remain safe. Properly prepared and cooked poultry and eggs are safe to eat. As USDA and its Federal, State and industry partners continue to respond to this current outbreak, all continue to stress the importance of enhanced biosecurity measures for backyard and commercial poultry owners. Additional information about USDA avian influenza surveillance and emergency response efforts can be found atwww.usda.gov/avianinfluenza. http://www.aphis.usda.gov/wps/portal/aphis/home/!ut/p/a1/04_Sj9CPykssy0xPLMnMz0vMAfGjzOK9_D2MDJ0MjDz9vT3NDDz9woIMnDxcDA2CjYEKIoEKDHAARwNC-sP1o8BKnN0dPUzMfYB6TCyMDDxdgPLmlr4GBp5mUAV4rCjIjTDIdFRUBADp5_lR/?1dmy&urile=wcm%3apath%3a%2Faphis_content_library%2Fsa_newsroom%2Fsa_news%2Fsa_by_date%2Fsa_2015%2Fsa_july%2Fct_

USDA Publishes Updated Interagency Strategic and Surveillance Plans for Avian Influenza in Migratory BirdsUSDA Animal and Plant Health Inspection Service sent this bulletin at 07/02/2015 11:31 AM EDTUSDA PUBLISHES UPDATED INTERAGENCY STRATEGIC AND SURVEILLANCE PLANS FOR AVIAN INFLUENZA IN MIGRATORY BIRDS Posted by Gail Keirn, APHIS Legislative and Public Affairs, 970-266-6007 July 2, 2015 - Today, the U.S. Department of Agriculture's (USDA) Animal and Plant Health Inspection Service (APHIS) released two updated interagency plans related to the surveillance of avian influenza in wild birds. As part of USDA's on-going preparation efforts for highly pathogenic avian influenza (HPAI), these updated plans will help USDA with further monitoring of wild birds for the HPAI virus during the fall migration. Between now and March 2016, HPAI surveillance in wild birds will increase as APHIS Wildlife Services biologists and their State partners collect approximately 41,000 samples from apparently healthy wild birds from targeted areas throughout the United States. The first updated plan— U.S. Interagency Strategic Plan for Early Detection and Monitoring for Avian Influenzas of Significance in Wild Birds—describes a unified national system for migratory wild bird sampling involving Federal, State, university and non-governmental organizations. The second updated plan— 2015Surveillance Plan for Highly Pathogenic Avian Influenza in Waterfowl in the United States— outlines specific wild bird surveillance efforts for 2015-2016. These efforts were led by the Interagency Steering Committee for Surveillance for HPAI in Wild Birds. This committee is comprised of experts from USDA APHIS, the Department of the Interior’s U.S. Geological Survey and U.S. Fish and Wildlife Service, the U.S. Department of Health and Human Services’ Centers for Disease Control and Prevention (CDC) and the National Flyway Council. http://content.govdelivery.com/accounts/USDAAPHIS/bulletins/10ced03

USDA describes H5 surveillance plans for wild birds.

AlignSegment-IDNameScoreE-ValueIdentityEPI620461A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620447A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620440A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620433A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620426A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620419A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620412A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI590689A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI587637A/chicken/Iowa/04-20/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620454A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI590744A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI590737A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI590723A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI590716A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI569366A/turkey/Washington/61-22/2014 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI586554A/chicken/BC/FAV24/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI586538A/chicken/BC/FAV22/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI586522A/chicken/BC/FAV20/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI586514A/poultry/BC/FAV19/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585671A/baikal teal/Korea/2417/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585670A/baikal teal/Korea/2416/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585669A/baikal teal/Korea/2414/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585667A/baikal teal/Korea/2403/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585666A/baikal teal/Korea/2402/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585664A/baikal teal/Korea/1458/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585663A/baikal teal/Korea/1457/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585660A/baikal teal/Korea/1452/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585657A/baikal teal/Korea/1447/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585656A/baikal teal/Korea/1446/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585655A/baikal teal/Korea/1445/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585653A/baikal teal/Korea/1437/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI585096A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI576474A/chicken/BC/FAV8/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI569394A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI569387A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI569363A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI569361A/chicken/Washington/61-9/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI568703A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI568700A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561713A/broiler duck/Korea/H31/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561701A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561694A/common teal/Korea/H455-30/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561685A/tundra swan/Korea/H411/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561678A/bean goose/Korea/H328/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561671A/mallard/Korea/H297/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561664A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561657A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561630A/mallard/Korea/H207/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561623A/breeder duck/Korea/H200/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561574A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561560A/Coot/Korea/H81/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561553A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561533A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561519A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561345A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI561200A/broiler duck/Korea/H29/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI542634A/mallard/Korea/W452/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI509757A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI509712A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI590730A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI590709A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI587525A/American wigeon/BC/050-31/2015 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI586562A/chicken/BC/FAV25/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI586546A/chicken/BC/FAV23/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI586530A/chicken/BC/FAV21/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI586505A/poultry/BC/FAV17/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585668A/baikal teal/Korea/2406/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585665A/baikal teal/Korea/2399/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585661A/baikal teal/Korea/1454/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585659A/baikal teal/Korea/1449/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585658A/baikal teal/Korea/1448/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585654A/baikal teal/Korea/1441/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI584083A/turkey/BC/FAV14/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561650A/breeder duck/Korea/H249/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561609A/broiler duck/Korea/H145/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561602A/broiler duck/Korea/H133/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561595A/breeder duck/Korea/H128/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561581A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561546A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561364A/bean goose/Korea/H40/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561357A/broiler duck/Korea/H48/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561352A/broiler duck/Korea/H47/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561191A/waterfowl/Korea/S005/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI554604A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI553471A/wigeon/Sakha/1/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI552750A/turkey/Germany/R2474-L00899/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI548628A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI548428A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI590696A/chicken/Washington/3490-18/2015 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI588956A/goose/Taiwan/a015/2015 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI586497A/poultry/BC/FAV15/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI585662A/baikal teal/Korea/1456/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI576481A/chicken/BC/FAV9/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI573642A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI573302A/turkey/BC/FAV10/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561637A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561616A/breeder duck/Korea/H158/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561567A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561512A/bean goose/Korea/H53/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI558013A/duck/England/36038/14 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)

AlignSegment-IDNameScoreE-ValueIdentityEPI620409A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 5 (NP)2765.60.000000e+001497/1497 (100%)EPI590741A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 5 (NP)2760.00.000000e+001496/1497 (99%)EPI620458A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI620451A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI620437A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI620430A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI620423A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI620416A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI590720A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI590713A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI573299A/turkey/BC/FAV10/2014 (A/H5N2) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI620444A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI590700A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI590686A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI587634A/chicken/Iowa/04-20/2015 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI586527A/chicken/BC/FAV21/2014 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI586519A/chicken/BC/FAV20/2014 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI586502A/poultry/BC/FAV17/2014 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI576471A/chicken/BC/FAV8/2014 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI569384A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI569365A/turkey/Washington/61-22/2014 (A/H5N2) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI586559A/chicken/BC/FAV25/2014 (A/H5N2) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI586543A/chicken/BC/FAV23/2014 (A/H5N2) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI586535A/chicken/BC/FAV22/2014 (A/H5N2) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI586510A/poultry/BC/FAV19/2014 (A/H5N2) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI586494A/poultry/BC/FAV15/2014 (A/H5N2) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI584080A/turkey/BC/FAV14/2014 (A/H5N2) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI576478A/chicken/BC/FAV9/2014 (A/H5N2) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI590734A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 5 (NP)2737.90.000000e+001492/1497 (99%)EPI586551A/chicken/BC/FAV24/2014 (A/H5N2) segment 5 (NP)2737.90.000000e+001492/1497 (99%)EPI573277A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 5 (NP)2737.90.000000e+001492/1497 (99%)EPI573272A/chicken/Washington/61-9/2014 (A/H5N2) segment 5 (NP)2737.90.000000e+001492/1497 (99%)EPI590727A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI590693A/chicken/Washington/3490-18/2015 (A/H5N2) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI585093A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI526421A/American green-winged teal/Ohio/13OS2086/2013 (A/H6N8) segment 5 (NP)2676.90.000000e+001481/1497 (98%)EPI526348A/American green-winged teal/Ohio/13OS2084/2013 (A/H6N8) segment 5 (NP)2676.90.000000e+001481/1497 (98%)EPI616371A/blue-winged teal/Illinois/12OS2929/2012 (A/H3N8) segment 5 (NP)2671.40.000000e+001480/1497 (98%)EPI513134A/mallard/Wisconsin/11OS4085/2011 (A/H0) segment 5 (NP)2665.80.000000e+001479/1497 (98%)EPI512973A/blue-winged teal/Wisconsin/11OS3052/2011 (A/H3N2) segment 5 (NP)2665.80.000000e+001479/1497 (98%)EPI512391A/northern pintail/Illinois/11OS4796/2011 (A/H5N3) segment 5 (NP)2665.80.000000e+001479/1497 (98%)EPI512368A/northern shoveler/Illinois/11OS4707/2011 (A/H4N6) segment 5 (NP)2665.80.000000e+001479/1497 (98%)EPI616435A/mallard/Illinois/12OS5130/2012 (A/H1N1) segment 5 (NP)2660.30.000000e+001478/1497 (98%)EPI616391A/northern shoveler/Illinois/12OS5138/2012 (A/H1N1) segment 5 (NP)2660.30.000000e+001478/1497 (98%)EPI513005A/northern shoveler/Wisconsin/11OS4110/2011 (A/H4N6) segment 5 (NP)2660.30.000000e+001478/1497 (98%)EPI512353A/mallard/Illinois/11OS4420/2011 (A/H2N3) segment 5 (NP)2660.30.000000e+001478/1497 (98%)EPI616291A/blue-winged teal/Ohio/12OS4593/2012 (A/H4N6) segment 5 (NP)2654.80.000000e+001477/1497 (98%)EPI526332A/American green-winged teal/Ohio/13OS2060/2013 (A/H6N8) segment 5 (NP)2654.80.000000e+001477/1497 (98%)EPI512695A/mallard/Wisconsin/11OS4309/2011 (A/H4N6) segment 5 (NP)2654.80.000000e+001477/1497 (98%)EPI616346A/American green-winged teal/Mississippi/12OS5061/2012 (A/H5N2) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI512616A/mallard/Wisconsin/11OS4310/2011 (A/H4N6) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI418744A/wood duck/Wisconsin/10OS2778/2010 (A/H3N8) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI418737A/mallard/Wisconsin/10OS2773/2010 (A/H3N8) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI616351A/blue-winged teal/Illinois/12OS2986/2012 (A/H3N8) segment 5 (NP)2643.70.000000e+001475/1497 (98%)EPI616186A/blue-winged teal/Ohio/12OS2229/2012 (A/H3N6) segment 5 (NP)2643.70.000000e+001475/1497 (98%)EPI596207A/mallard/Maryland/13OS3035/2014 (A/H10N7) segment 5 (NP)2643.70.000000e+001475/1497 (98%)EPI585180A/redhead/Ohio/13OS0406/2013 (A/H7N3) segment 5 (NP)2643.70.000000e+001475/1497 (98%)EPI512928A/mallard/Illinois/11OS4121/2011 (A/H6N2) segment 5 (NP)2643.70.000000e+001475/1497 (98%)EPI616467A/mallard/Illinois/12OS5080/2012 (A/H5N1) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI512749A/northern shoveler/Wisconsin/11OS3013/2011 (A/H4N8) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI449581A/green-winged teal/Minnesota/Sg-01000/2008 (A/H3N6) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI449553A/mallard/Minnesota/Sg-00930/2008 (A/H11N9) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI419628A/mallard/Missouri/10MO084/2010 (A/H5N9) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI594842A/mallard/Maryland/13OS3019/2014 (A/H0) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI475450A/northern shoveler/Minnesota/Sg-00655/2008 (A/H1N1) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI468600A/northern shoveler/Minnesota/Sg-00651/2008 (A/H1N1) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI450064A/red-necked grebe/Minnesota/AI10-2528/2010 (A/H4N8) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI449397A/northern shoveler/Minnesota/Sg-00665/2008 (A/H0) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI448589A/mallard/Minnesota/Sg-00620/2008 (A/H1N1) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI419491A/northern shoverl/Mississippi/11OS145/2011 (A/H7N9) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI418903A/blue-winged teal/Wisconsin/10OS2862/2010 (A/H3N2) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI334171A/mallard/Illinois/3974/2009 (A/H5N2) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI468579A/mallard/Minnesota/Sg-00627/2008 (A/H1N1) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI468414A/mallard/Minnesota/Sg-00628/2008 (A/H1N1) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI433780A/blue-winged teal/Nova Scotia/00067/2010 (A/H0) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI419506A/American green-winged teal/Mississippi/11OS247/2011 (A/H0) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI334289A/blue-winged teal/Wisconsin/2753/2009 (A/H4N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI328603A/northern shoveler/California/9079/2008 (A/H4N4) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI328067A/northern shoveler/California/10024/2008 (A/H4N4) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI616200A/blue-winged teal/Ohio/12OS2244/2012 (A/H4N6) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI595979A/American black duck/Maryland/11OS3978/2012 (A/H2N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI595972A/American black duck/Maryland/11OS3898/2012 (A/H2N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI595958A/mallard/Maryland/11OS3829/2012 (A/H2N2) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI449387A/mallard/Minnesota/Sg-0617/2008 (A/H1N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI419169A/mallard/Wisconsin/10OS3866/2010 (A/H3N6) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI616227A/blue-winged teal/Ohio/12OS2123/2012 (A/H3N2) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI595965A/mallard/Maryland/11OS3833/2012 (A/H2N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI486895A/mallard/California/3471/2012 (A/H4N6) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI328083A/northern shoveler/California/9267/2008 (A/H4N6) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI616113A/blue-winged teal/Ohio/12OS2154/2012 (A/H3N2) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI328091A/northern shoveler/California/9228/2008 (A/H4N6) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI596179A/mallard/Maryland/12OS565/2012 (A/H2N2) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI526489A/blue-winged teal/Iowa/13OS2338/2013 (A/H4N6) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI513149A/northern shoveler/Wisconsin/11OS4631/2011 (A/H0) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI387206A/mallard/California/3134/2010 (A/H1N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI342993A/mallard/Alberta/507/2008 (A/H3N8) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI327399A/ring-necked duck/Ontario/15530/2005 (A/H3N2) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI596165A/environment/Maryland/12OS1510/2012 (A/H3N6) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI596144A/environment/Maryland/12OS1505/2012 (A/H3N6) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI596137A/environment/Maryland/12OS1502/2012 (A/H3N6) segment 5 (NP)2593.80.000000e+001466/1497 (97%)

AlignSegment-IDNameScoreE-ValueIdentityEPI620398A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 3 (PA)3973.30.000000e+002151/2151 (100%)EPI620404A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 3 (PA)3962.20.000000e+002149/2151 (99%)EPI620403A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 3 (PA)3962.20.000000e+002149/2151 (99%)EPI620402A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 3 (PA)3962.20.000000e+002149/2151 (99%)EPI620401A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 3 (PA)3962.20.000000e+002149/2151 (99%)EPI620400A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 3 (PA)3962.20.000000e+002149/2151 (99%)EPI587639A/chicken/Iowa/04-20/2015 (A/H5N2) segment 3 (PA)3962.20.000000e+002149/2151 (99%)EPI620399A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 3 (PA)3951.10.000000e+002147/2151 (99%)EPI590476A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 3 (PA)3951.10.000000e+002147/2151 (99%)EPI590475A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 3 (PA)3951.10.000000e+002147/2151 (99%)EPI590472A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 3 (PA)3951.10.000000e+002147/2151 (99%)EPI590469A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 3 (PA)3951.10.000000e+002147/2151 (99%)EPI590473A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 3 (PA)3945.60.000000e+002146/2151 (99%)EPI569362A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 3 (PA)3940.00.000000e+002145/2151 (99%)EPI569360A/chicken/Washington/61-9/2014 (A/H5N2) segment 3 (PA)3940.00.000000e+002145/2151 (99%)EPI590471A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI573280A/turkey/Washington/61-22/2014 (A/H5N2) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI590474A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI586557A/chicken/BC/FAV25/2014 (A/H5N2) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI586541A/chicken/BC/FAV23/2014 (A/H5N2) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI586525A/chicken/BC/FAV21/2014 (A/H5N2) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI586508A/poultry/BC/FAV19/2014 (A/H5N2) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI585107A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI569382A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI586533A/chicken/BC/FAV22/2014 (A/H5N2) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI586517A/chicken/BC/FAV20/2014 (A/H5N2) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI586500A/poultry/BC/FAV17/2014 (A/H5N2) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI584078A/turkey/BC/FAV14/2014 (A/H5N2) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI576173A/chicken/BC/FAV8/2014 (A/H5N2) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI590470A/chicken/Washington/3490-18/2015 (A/H5N2) segment 3 (PA)3917.90.000000e+002141/2151 (99%)EPI586549A/chicken/BC/FAV24/2014 (A/H5N2) segment 3 (PA)3917.90.000000e+002141/2151 (99%)EPI586492A/poultry/BC/FAV15/2014 (A/H5N2) segment 3 (PA)3917.90.000000e+002141/2151 (99%)EPI573292A/turkey/BC/FAV10/2014 (A/H5N2) segment 3 (PA)3917.90.000000e+002141/2151 (99%)EPI576174A/chicken/BC/FAV9/2014 (A/H5N2) segment 3 (PA)3912.30.000000e+002140/2151 (99%)EPI587520A/American wigeon/BC/050-31/2015 (A/H5N8) segment 3 (PA)3906.80.000000e+002139/2151 (99%)EPI585103A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI569389A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI569370A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI569368A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI553207A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 3 (PA)3873.50.000000e+002133/2151 (99%)EPI588975A/duck/Taiwan/a068/2015 (A/H5N8) segment 3 (PA)3868.00.000000e+002130/2148 (99%)EPI588967A/chicken/Taiwan/a174/2015 (A/H5N3) segment 3 (PA)3868.00.000000e+002130/2148 (99%)EPI561686A/common teal/Korea/H455-30/2014 (A/H5N8) segment 3 (PA)3868.00.000000e+002132/2151 (99%)EPI588951A/goose/Taiwan/a015/2015 (A/H5N8) segment 3 (PA)3862.50.000000e+002130/2149 (99%)EPI585536A/baikal teal/Korea/2414/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585535A/baikal teal/Korea/2406/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585531A/baikal teal/Korea/1458/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585530A/baikal teal/Korea/1457/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585528A/baikal teal/Korea/1454/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585525A/baikal teal/Korea/1448/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585524A/baikal teal/Korea/1447/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585523A/baikal teal/Korea/1446/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI573637A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561712A/bean goose/Korea/H40/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561643A/tundra swan/Korea/H411/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561583A/broiler duck/Korea/H133/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561537A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561534A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561502A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561500A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561338A/broiler duck/Korea/H49/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI561334A/broiler duck/Korea/H47/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI509694A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI509693A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI585538A/baikal teal/Korea/2417/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI585537A/baikal teal/Korea/2416/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI585533A/baikal teal/Korea/2402/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI585532A/baikal teal/Korea/2399/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI585529A/baikal teal/Korea/1456/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561687A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561642A/bean goose/Korea/H328/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561640A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561588A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561587A/mallard/Korea/H207/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561586A/breeder duck/Korea/H200/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561584A/broiler duck/Korea/H145/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561582A/breeder duck/Korea/H128/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561501A/broiler duck/Korea/H65/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561335A/broiler duck/Korea/H48/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561333A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561193A/broiler duck/Korea/H31/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI561192A/broiler duck/Korea/H29/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI585534A/baikal teal/Korea/2403/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI585527A/baikal teal/Korea/1452/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002130/2152 (98%)EPI585526A/baikal teal/Korea/1449/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI585522A/baikal teal/Korea/1445/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI585521A/baikal teal/Korea/1441/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI585520A/baikal teal/Korea/1437/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561641A/mallard/Korea/H297/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561639A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561585A/breeder duck/Korea/H158/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561539A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561538A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561536A/Coot/Korea/H81/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561535A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561499A/bean goose/Korea/H53/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI561184A/waterfowl/Korea/S005/2014 (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI573645A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 3 (PA)3845.80.000000e+002128/2151 (98%)EPI561638A/breeder duck/Korea/H249/2014 (A/H5N8) segment 3 (PA)3845.80.000000e+002128/2151 (98%)EPI542618A/mallard/Korea/W452/2014 (A/H5N8) segment 3 (PA)3845.80.000000e+002128/2151 (98%)

AlignSegment-IDNameScoreE-ValueIdentityEPI620407A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 2 (PB1)4200.40.000000e+002274/2274 (100%)EPI590684A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 2 (PB1)4194.90.000000e+002273/2274 (99%)EPI590739A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI590698A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI586556A/chicken/BC/FAV25/2014 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI586540A/chicken/BC/FAV23/2014 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI586507A/poultry/BC/FAV19/2014 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI584077A/turkey/BC/FAV14/2014 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI573275A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI573270A/chicken/Washington/61-9/2014 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI569364A/turkey/Washington/61-22/2014 (A/H5N2) segment 2 (PB1)4183.80.000000e+002271/2274 (99%)EPI590718A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI590711A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI590691A/chicken/Washington/3490-18/2015 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI586516A/chicken/BC/FAV20/2014 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI586499A/poultry/BC/FAV17/2014 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI586491A/poultry/BC/FAV15/2014 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI585090A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI576469A/chicken/BC/FAV8/2014 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI569381A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 2 (PB1)4178.20.000000e+002270/2274 (99%)EPI620456A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI620435A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI620428A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI620421A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI620414A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI587631A/chicken/Iowa/04-20/2015 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI586548A/chicken/BC/FAV24/2014 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI586532A/chicken/BC/FAV22/2014 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI586524A/chicken/BC/FAV21/2014 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI576476A/chicken/BC/FAV9/2014 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI573297A/turkey/BC/FAV10/2014 (A/H5N2) segment 2 (PB1)4172.70.000000e+002269/2274 (99%)EPI620442A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 2 (PB1)4167.20.000000e+002268/2274 (99%)EPI590732A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 2 (PB1)4167.20.000000e+002268/2274 (99%)EPI590725A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 2 (PB1)4167.20.000000e+002268/2274 (99%)EPI620449A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 2 (PB1)4145.00.000000e+002264/2274 (99%)EPI420193A/bufflehead/California/3118/2011 (A/H4N8) segment 2 (PB1)4067.40.000000e+002250/2274 (98%)EPI418616A/American green-winged teal/Mississippi/11OS98/2011 (A/H0) segment 2 (PB1)4056.40.000000e+002248/2274 (98%)EPI512660A/wood duck/Wisconsin/11OS3443/2011 (A/H11N9) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI512230A/mallard/Arkansas/12OS179/2012 (A/H1N1) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI436582A/American green-winged teal/Interior Alaska/10BM05376R0/2010 (A/H3N8) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI418963A/American green-winged teal/Wisconsin/10OS3127/2010 (A/H5N2) segment 2 (PB1)4045.30.000000e+002246/2274 (98%)EPI453910A/northern pintail/Interior Alaska/10BM10298R0/2010 (A/H3N8) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI436612A/northern shoveler/Interior Alaska/10BM05487R0/2010 (A/H3N8) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI436589A/northern shoveler/Interior Alaska/10BM05382R0/2010 (A/H3N8) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI387181A/mallard/California/2396/2010 (A/H5N2) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI512474A/blue-winged teal/Missouri/11OS2563/2011 (A/H12N4) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI452523A/northern pintail/Interior Alaska/10BM12413R0/2010 (A/H8N4) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI451651A/mallard/Interior Alaska/10BM07575R0/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI436619A/northern shoveler/Interior Alaska/10BM05491R0/2010 (A/H3N8) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI433197A/mallard/Interior Alaska/10BM04564R1/2010 (A/H7N3) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI420073A/mallard/California/2578V/2011 (A/H0) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI419953A/mallard/California/2559P/2011 (A/H5N8) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI419909A/mallard/California/2552V/2011 (A/H4N8) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI419869A/mallard/California/2542V/2011 (A/H5N1) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI419842A/mallard/California/2536P/2011 (A/H5N1) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI419835A/mallard/California/2535V/2011 (A/H5N1) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI419828A/mallard/California/2535P/2011 (A/H5N1) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI398563A/chicken/Jalisco/12283/2012 (A/H7N3) segment 2 (PB1)4028.70.000000e+002243/2274 (98%)EPI616068A/northern shoveler/Ohio/12OS3173/2012 (A/H12N5) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI513088A/mallard/Wisconsin/11OS4104/2011 (A/H1N2) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI512676A/mallard/Wisconsin/11OS3468/2011 (A/H2N3) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI420142A/mallard/California/2595V/2011 (A/H12N5) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI420135A/mallard/California/2595P/2011 (A/H12N5) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI420114A/mallard/California/2590V/2011 (A/H4N6) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI420087A/mallard/California/2584V/2011 (A/H4N9) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI420080A/mallard/California/2584P/2011 (A/H4N9) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI419939A/mallard/California/2555V/2011 (A/H11N9) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI419916A/mallard/California/2555P/2011 (A/H11N9) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI419807A/mallard/California/2531V/2011 (A/H5N1) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI419794A/mallard/California/2531P/2011 (A/H5N1) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI419786A/mallard/California/2527V/2011 (A/H5N1) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI387271A/northern shoveler/California/3628/2011 (A/H10) segment 2 (PB1)4023.10.000000e+002242/2274 (98%)EPI527489A/blue-winged teal/TX/AI13-1028/2013 (A/H14N5) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI420128A/mallard/California/2594V/2011 (A/H4N6) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI420121A/mallard/California/2594P/2011 (A/H4N6) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI420101A/mallard/California/2589V/2011 (A/H4N1) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI420094A/mallard/California/2589P/2011 (A/H4N1) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI419855A/mallard/California/2536V/2011 (A/H5N1) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI419821A/mallard/California/2533V/2011 (A/H4N6) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI419779A/mallard/California/2525P/2011 (A/H4N6) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI418440A/mallard/California/2525V/2011 (A/H0) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI616276A/mallard/Ohio/12OS2351/2012 (A/H3N6) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI616160A/American green-winged teal/Ohio/12OS2128/2012 (A/H6N5) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI531395A/blue-winged teal/Guatemala/CIP049H105-15/2011 (A/H14N3) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI531387A/blue-winged teal/Guatemala/CIP049H106-62/2011 (A/H14N6) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI513151A/northern shoveler/Wisconsin/11OS4631/2011 (A/H0) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI512252A/northern shoveler/Mississippi/12OS231/2012 (A/H0) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI449635A/mallard/Minnesota/Sg-01034/2008 (A/H11N2) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI420214A/green-winged teal/California/123/2012 (A/H1N1) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI419981A/mallard/California/2566P/2011 (A/H4N8) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI419974A/mallard/California/2563V/2011 (A/H4N6) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI419967A/mallard/California/2563P/2011 (A/H4N6) segment 2 (PB1)4012.00.000000e+002240/2274 (98%)EPI614841A/mallard/Ohio/12OS5400/2013 (A/H0) segment 2 (PB1)4006.50.000000e+002239/2274 (98%)EPI549555A/blue-winged teal/TX/AI13-1009/2013 (A/H11N3) segment 2 (PB1)4006.50.000000e+002239/2274 (98%)EPI512871A/northern pintail/Wisconsin/11OS3299/2011 (A/H4N6) segment 2 (PB1)4006.50.000000e+002239/2274 (98%)EPI512587A/American green-winged teal/Mississippi/11OS5869/2011 (A/H4N6) segment 2 (PB1)4006.50.000000e+002239/2274 (98%)EPI333682A/mallard/Ohio/1695/2009 (A/H4N6) segment 2 (PB1)4006.50.000000e+002239/2274 (98%)EPI617004A/mallard/Alberta/192/2010 (A/H7N3) segment 2 (PB1)4001.00.000000e+002238/2274 (98%)EPI616992A/mallard/Alberta/167/2010 (A/H7N3) segment 2 (PB1)4001.00.000000e+002238/2274 (98%)EPI616341A/mallard/Missouri/12OS5759/2012 (A/H11N9) segment 2 (PB1)4001.00.000000e+002238/2274 (98%)

AlignSegment-IDNameScoreE-ValueIdentityEPI620406A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 1 (PB2)4211.50.000000e+002280/2280 (100%)EPI590738A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 1 (PB2)4200.40.000000e+002278/2280 (99%)EPI590724A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 1 (PB2)4200.40.000000e+002278/2280 (99%)EPI590683A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 1 (PB2)4200.40.000000e+002278/2280 (99%)EPI620455A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 1 (PB2)4194.90.000000e+002277/2280 (99%)EPI620427A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 1 (PB2)4194.90.000000e+002277/2280 (99%)EPI620420A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 1 (PB2)4194.90.000000e+002277/2280 (99%)EPI620413A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 1 (PB2)4194.90.000000e+002277/2280 (99%)EPI587630A/chicken/Iowa/04-20/2015 (A/H5N2) segment 1 (PB2)4194.90.000000e+002277/2280 (99%)EPI620448A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI620441A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI620434A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI586531A/chicken/BC/FAV22/2014 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI586498A/poultry/BC/FAV17/2014 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI586490A/poultry/BC/FAV15/2014 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI573296A/turkey/BC/FAV10/2014 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI573279A/turkey/Washington/61-22/2014 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI573274A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 1 (PB2)4189.30.000000e+002276/2280 (99%)EPI590731A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI590717A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI586555A/chicken/BC/FAV25/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI586547A/chicken/BC/FAV24/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI586539A/chicken/BC/FAV23/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI586523A/chicken/BC/FAV21/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI585089A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI584076A/turkey/BC/FAV14/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI576475A/chicken/BC/FAV9/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI576468A/chicken/BC/FAV8/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI573269A/chicken/Washington/61-9/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI569380A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI569379A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 1 (PB2)4183.80.000000e+002275/2280 (99%)EPI590710A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 1 (PB2)4178.20.000000e+002274/2280 (99%)EPI590697A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 1 (PB2)4178.20.000000e+002274/2280 (99%)EPI586515A/chicken/BC/FAV20/2014 (A/H5N2) segment 1 (PB2)4178.20.000000e+002275/2281 (99%)EPI585081A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 1 (PB2)4178.20.000000e+002274/2280 (99%)EPI569369A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 1 (PB2)4178.20.000000e+002274/2280 (99%)EPI569367A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 1 (PB2)4178.20.000000e+002274/2280 (99%)EPI586506A/poultry/BC/FAV19/2014 (A/H5N2) segment 1 (PB2)4174.50.000000e+002273/2280 (99%)EPI590690A/chicken/Washington/3490-18/2015 (A/H5N2) segment 1 (PB2)4172.70.000000e+002273/2280 (99%)EPI587519A/American wigeon/BC/050-31/2015 (A/H5N8) segment 1 (PB2)4172.70.000000e+002273/2280 (99%)EPI573283A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 1 (PB2)4167.20.000000e+002272/2280 (99%)EPI588949A/goose/Taiwan/a015/2015 (A/H5N8) segment 1 (PB2)4139.50.000000e+002267/2280 (99%)EPI553205A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 1 (PB2)4139.50.000000e+002267/2280 (99%)EPI585557A/baikal teal/Korea/2417/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI585556A/baikal teal/Korea/2416/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI585553A/baikal teal/Korea/2403/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI585543A/baikal teal/Korea/1447/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI585541A/baikal teal/Korea/1445/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561702A/bean goose/Korea/H40/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561672A/bean goose/Korea/H328/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561631A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561624A/mallard/Korea/H207/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561568A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561540A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561527A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561506A/bean goose/Korea/H53/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI561358A/broiler duck/Korea/H49/2014 (A/H5N8) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI585554A/baikal teal/Korea/2406/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585551A/baikal teal/Korea/2399/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585550A/baikal teal/Korea/1458/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585548A/baikal teal/Korea/1456/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585546A/baikal teal/Korea/1452/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585545A/baikal teal/Korea/1449/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585544A/baikal teal/Korea/1448/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585539A/baikal teal/Korea/1437/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI561610A/breeder duck/Korea/H158/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI561603A/broiler duck/Korea/H145/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI561575A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI561561A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI561513A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI561353A/broiler duck/Korea/H48/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI561339A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI585555A/baikal teal/Korea/2414/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI585549A/baikal teal/Korea/1457/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI585542A/baikal teal/Korea/1446/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI585540A/baikal teal/Korea/1441/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI573635A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561679A/tundra swan/Korea/H411/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561665A/mallard/Korea/H297/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561651A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561644A/breeder duck/Korea/H249/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561596A/broiler duck/Korea/H133/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561589A/breeder duck/Korea/H128/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561554A/Coot/Korea/H81/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561547A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561520A/broiler duck/Korea/H65/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561346A/broiler duck/Korea/H47/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561201A/broiler duck/Korea/H31/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561194A/broiler duck/Korea/H29/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI561185A/waterfowl/Korea/S005/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI542630A/mallard/Korea/W452/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI509707A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI509702A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI585547A/baikal teal/Korea/1454/2014 (A/H5N8) segment 1 (PB2)4117.30.000000e+002263/2280 (99%)EPI561695A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 1 (PB2)4117.30.000000e+002263/2280 (99%)EPI561658A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 1 (PB2)4117.30.000000e+002263/2280 (99%)EPI561617A/breeder duck/Korea/H200/2014 (A/H5N8) segment 1 (PB2)4117.30.000000e+002263/2280 (99%)EPI517158A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 1 (PB2)4117.30.000000e+002263/2280 (99%)EPI561688A/common teal/Korea/H455-30/2014 (A/H5N8) segment 1 (PB2)4111.80.000000e+002262/2280 (99%)EPI595139A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 1 (PB2)4089.60.000000e+002258/2280 (99%)

AlignSegment-IDNameScoreE-ValueIdentityEPI620411A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI590743A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI590736A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI590729A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI590722A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI590708A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI590688A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI568701A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI568698A/turkey/Washington/61-22/2014 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI568697A/chicken/Washington/61-9/2014 (A/H5N2) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI620460A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI620453A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI620446A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI620439A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI620432A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI620425A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI620418A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI590715A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI587636A/chicken/Iowa/04-20/2015 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI586561A/chicken/BC/FAV25/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI586553A/chicken/BC/FAV24/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI586521A/chicken/BC/FAV20/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI586504A/poultry/BC/FAV17/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585651A/baikal teal/Korea/2416/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585650A/baikal teal/Korea/2414/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585649A/baikal teal/Korea/2406/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585647A/baikal teal/Korea/2402/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585646A/baikal teal/Korea/2399/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585645A/baikal teal/Korea/1458/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585644A/baikal teal/Korea/1457/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585643A/baikal teal/Korea/1456/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585642A/baikal teal/Korea/1454/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585641A/baikal teal/Korea/1452/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585639A/baikal teal/Korea/1448/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585638A/baikal teal/Korea/1447/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585637A/baikal teal/Korea/1446/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585635A/baikal teal/Korea/1441/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585634A/baikal teal/Korea/1437/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI585087A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI584082A/turkey/BC/FAV14/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI576480A/chicken/BC/FAV9/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI576473A/chicken/BC/FAV8/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI573301A/turkey/BC/FAV10/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI569386A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561700A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561693A/common teal/Korea/H455-30/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561684A/tundra swan/Korea/H411/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561677A/bean goose/Korea/H328/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561670A/mallard/Korea/H297/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561656A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561649A/breeder duck/Korea/H249/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561636A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561629A/mallard/Korea/H207/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561622A/breeder duck/Korea/H200/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561601A/broiler duck/Korea/H133/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561594A/breeder duck/Korea/H128/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561580A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561573A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561566A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561559A/Coot/Korea/H81/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561552A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561532A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561525A/broiler duck/Korea/H65/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561511A/bean goose/Korea/H53/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561351A/broiler duck/Korea/H47/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561344A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561211A/broiler duck/Korea/H31/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561199A/broiler duck/Korea/H29/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI561190A/waterfowl/Korea/S005/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI553211A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI542633A/mallard/Korea/W452/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI517164A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI509756A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI509711A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI590695A/chicken/Washington/3490-18/2015 (A/H5N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI587524A/American wigeon/BC/050-31/2015 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI586545A/chicken/BC/FAV23/2014 (A/H5N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI586537A/chicken/BC/FAV22/2014 (A/H5N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI586529A/chicken/BC/FAV21/2014 (A/H5N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI586513A/poultry/BC/FAV19/2014 (A/H5N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI586496A/poultry/BC/FAV15/2014 (A/H5N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI585652A/baikal teal/Korea/2417/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI585648A/baikal teal/Korea/2403/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI585640A/baikal teal/Korea/1449/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI585636A/baikal teal/Korea/1445/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI585095A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI573289A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI569393A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI568702A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI568699A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561708A/bean goose/Korea/H40/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561663A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561615A/breeder duck/Korea/H158/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561608A/broiler duck/Korea/H145/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561545A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561518A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561363A/broiler duck/Korea/H49/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI561356A/broiler duck/Korea/H48/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI554603A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI553346A/chicken/Miyazaki/7/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)

AlignSegment-IDNameScoreE-ValueIdentityEPI620410A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 6 (NA)2604.90.000000e+001410/1410 (100%)EPI590742A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 6 (NA)2604.90.000000e+001410/1410 (100%)EPI590687A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 6 (NA)2604.90.000000e+001410/1410 (100%)EPI590721A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 6 (NA)2599.40.000000e+001409/1410 (99%)EPI590714A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 6 (NA)2593.80.000000e+001408/1410 (99%)EPI620459A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI620452A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI620445A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI620438A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI620431A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI620424A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI620417A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI590735A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI590728A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI587635A/chicken/Iowa/04-20/2015 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI573282A/turkey/Washington/61-22/2014 (A/H5N2) segment 6 (NA)2588.30.000000e+001407/1410 (99%)EPI586544A/chicken/BC/FAV23/2014 (A/H5N2) segment 6 (NA)2582.70.000000e+001406/1410 (99%)EPI586511A/poultry/BC/FAV19/2014 (A/H5N2) segment 6 (NA)2582.70.000000e+001406/1410 (99%)EPI584081A/turkey/BC/FAV14/2014 (A/H5N2) segment 6 (NA)2582.70.000000e+001406/1410 (99%)EPI573278A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 6 (NA)2582.70.000000e+001406/1410 (99%)EPI573273A/chicken/Washington/61-9/2014 (A/H5N2) segment 6 (NA)2582.70.000000e+001406/1410 (99%)EPI590701A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 6 (NA)2577.20.000000e+001405/1410 (99%)EPI586520A/chicken/BC/FAV20/2014 (A/H5N2) segment 6 (NA)2577.20.000000e+001405/1410 (99%)EPI585094A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 6 (NA)2577.20.000000e+001405/1410 (99%)EPI586552A/chicken/BC/FAV24/2014 (A/H5N2) segment 6 (NA)2571.70.000000e+001404/1410 (99%)EPI586528A/chicken/BC/FAV21/2014 (A/H5N2) segment 6 (NA)2571.70.000000e+001404/1410 (99%)EPI586495A/poultry/BC/FAV15/2014 (A/H5N2) segment 6 (NA)2571.70.000000e+001404/1410 (99%)EPI569385A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 6 (NA)2571.70.000000e+001404/1410 (99%)EPI586536A/chicken/BC/FAV22/2014 (A/H5N2) segment 6 (NA)2568.00.000000e+001403/1410 (99%)EPI586560A/chicken/BC/FAV25/2014 (A/H5N2) segment 6 (NA)2566.10.000000e+001403/1410 (99%)EPI586503A/poultry/BC/FAV17/2014 (A/H5N2) segment 6 (NA)2566.10.000000e+001403/1410 (99%)EPI576479A/chicken/BC/FAV9/2014 (A/H5N2) segment 6 (NA)2566.10.000000e+001403/1410 (99%)EPI576472A/chicken/BC/FAV8/2014 (A/H5N2) segment 6 (NA)2566.10.000000e+001403/1410 (99%)EPI573300A/turkey/BC/FAV10/2014 (A/H5N2) segment 6 (NA)2566.10.000000e+001403/1410 (99%)EPI590694A/chicken/Washington/3490-18/2015 (A/H5N2) segment 6 (NA)2560.60.000000e+001402/1410 (99%)EPI418959A/American green-winged teal/Wisconsin/10OS3127/2010 (A/H5N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI512135A/northern pintail/Mississippi/12OS420/2012 (A/H0) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI450007A/blue-winged teal/Louisiana/AI09-5234/2009 (A/H11N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI418609A/American green-winged teal/Mississippi/11OS98/2011 (A/H0) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI332004A/blue-winged teal/Guatemala/CIP049-10/2009 (A/H11N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI331988A/blue-winged teal/Guatemala/CIP049-03/2009 (A/H11N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI512150A/northern shoveler/Mississippi/12OS456/2012 (A/H14N2) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI420145A/northern shoveler/California/3676/2010 (A/H8N2) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI419288A/American wigeon/Iowa/10OS2748/2010 (A/H2N2) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI418807A/American green-winged teal/Illinois/10OS3589/2010 (A/H6N2) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI418497A/blue-winged teal/Illinois/10OS3610/2010 (A/H6N2) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI418472A/mallard/Illinois/10OS3245/2010 (A/H0) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI387177A/mallard/California/2396/2010 (A/H5N2) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI333605A/American green-winged teal/Mississippi/404/2010 (A/H0) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI331996A/blue-winged teal/Guatemala/CIP049-11/2009 (A/H11N2) segment 6 (NA)2466.40.000000e+001385/1410 (98%)EPI512531A/gadwall/Mississippi/11OS6084/2011 (A/H11N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI512524A/northern shoveler/Mississippi/11OS6077/2011 (A/H11N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI418721A/mallard/Wisconsin/10OS2538/2010 (A/H3N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI512591A/northern shoveler/Mississippi/11OS5875/2011 (A/H5N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI419077A/mallard/Wisconsin/10OS3066/2010 (A/H6N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI616345A/American green-winged teal/Mississippi/12OS5061/2012 (A/H5N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI419118A/mallard/Mississippi/10OS4593/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI221406A/American green-winged teal/California/HKWF609/2007 (A/H5N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI419654A/gadwall/Missouri/10MO0280/2010 (A/H5N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI419647A/mallard/Missouri/10MO0253/2010 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI419111A/gadwall/Mississippi/10OS4531/2010 (A/H6N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI419138A/northern shoveler/Mississippi/10OS4526/2010 (A/H6N2) segment 6 (NA)2422.10.000000e+001377/1410 (97%)EPI413459A/mallard/Ohio/11OS2213/2011 (A/H11N2) segment 6 (NA)2422.10.000000e+001377/1410 (97%)EPI328608A/northern shoveler/California/8855/2008 (A/H5N2) segment 6 (NA)2422.10.000000e+001377/1410 (97%)EPI280744A/avian/Missouri/466554-6/2006 (A/H5N2) segment 6 (NA)2422.10.000000e+001377/1410 (97%)EPI513011A/northern pintail/Wisconsin/11OS4111/2011 (A/H6N2) segment 6 (NA)2416.50.000000e+001377/1411 (97%)EPI328639A/mallard/California/11100/2008 (A/H11N2) segment 6 (NA)2416.50.000000e+001376/1410 (97%)EPI328582A/northern shoveler/California/9680/2008 (A/H6N2) segment 6 (NA)2416.50.000000e+001376/1410 (97%)EPI328476A/green-winged teal/California/11285/2008 (A/H0) segment 6 (NA)2416.50.000000e+001376/1410 (97%)EPI328156A/mallard/California/11353/2008 (A/H10N2) segment 6 (NA)2416.50.000000e+001376/1410 (97%)EPI328489A/green-winged teal/California/7972/2008 (A/H6N2) segment 6 (NA)2411.00.000000e+001375/1410 (97%)EPI328108A/northern shoveler/California/9017/2008 (A/H11N2) segment 6 (NA)2411.00.000000e+001375/1410 (97%)EPI419755A/northern shoveler/California/2815/2011 (A/H5N2) segment 6 (NA)2405.50.000000e+001374/1410 (97%)EPI327900A/northern pintail/California/6791/2008 (A/H11N2) segment 6 (NA)2405.50.000000e+001374/1410 (97%)EPI420032A/mallard/California/2571V/2011 (A/H0) segment 6 (NA)2399.90.000000e+001373/1410 (97%)EPI420024A/mallard/California/2571P/2011 (A/H11N2) segment 6 (NA)2399.90.000000e+001373/1410 (97%)EPI418643A/mallard/Illinois/10OS3249/2010 (A/H11N2) segment 6 (NA)2399.90.000000e+001373/1410 (97%)EPI334262A/mallard/Iowa/3195/2009 (A/H0) segment 6 (NA)2399.90.000000e+001374/1411 (97%)EPI285601A/wild bird/Wisconsin/433163-1/2006 (A/H5N2) segment 6 (NA)2394.40.000000e+001372/1410 (97%)EPI328316A/mallard/California/6420/2008 (A/H6N2) segment 6 (NA)2383.30.000000e+001371/1411 (97%)EPI442430A/brant/Alaska/44332-426/2007 (A/H10N2) segment 6 (NA)2377.80.000000e+001369/1410 (97%)EPI285602A/wild bird/Wisconsin/439436-2/2006 (A/H5N2) segment 6 (NA)2377.80.000000e+001369/1410 (97%)EPI285592A/wild bird/Wisconsin/439436/2006 (A/H5N2) segment 6 (NA)2377.80.000000e+001369/1410 (97%)EPI299469A/American green-winged teal/Wisconsin/08OS2291/2008 (A/H3N2) segment 6 (NA)2372.20.000000e+001368/1410 (97%)EPI299389A/gadwall/Wisconsin/08OS2293/2008 (A/H3N2) segment 6 (NA)2372.20.000000e+001368/1410 (97%)EPI299381A/American green-winged teal/Wisconsin/08OS2292/2008 (A/H3N2) segment 6 (NA)2372.20.000000e+001368/1410 (97%)EPI280848A/wild bird/Minnesota/460613-12/2006 (A/H5N2) segment 6 (NA)2372.20.000000e+001368/1410 (97%)EPI449517A/mallard/Minnesota/Sg-00847/2008 (A/H0) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI413390A/mallard/Ohio/10OS1470/2010 (A/H3N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI413383A/mallard/Ohio/10OS1469/2010 (A/H3N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI413369A/mallard/Ohio/10OS1467/2010 (A/H3N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI285597A/mallard/NV/450206/2006 (A/H5N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI285595A/mallard/NV/449567-4/2006 (A/H5N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI285594A/mallard/NV/449567-2/2006 (A/H5N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI280656A/mallard/Arkansas/473507-9/2006 (A/H5N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI280544A/mallard/Nevada/450206-4/2006 (A/H5N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI222394A/northern pintail/Saskatchewan/22910/2007 (A/H3N2) segment 6 (NA)2366.70.000000e+001367/1410 (96%)EPI187901A/mallard/Minnesota/Sg-00129/2007 (A/H6N2) segment 6 (NA)2363.00.000000e+001359/1399 (97%)EPI449695A/green-winged teal/Minnesota/Sg-01073/2008 (A/H6N2) segment 6 (NA)2361.10.000000e+001366/1410 (96%)EPI449653A/mallard/Minnesota/Sg-01040/2008 (A/H3N2) segment 6 (NA)2361.10.000000e+001366/1410 (96%)

AlignSegment-IDNameScoreE-ValueIdentityEPI620408A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI590740A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 4 (HA)3142.30.000000e+001703/1704 (99%)EPI590726A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI586550A/chicken/BC/FAV24/2014 (A/H5N2) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI586518A/chicken/BC/FAV20/2014 (A/H5N2) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI586509A/poultry/BC/FAV19/2014 (A/H5N2) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI584079A/turkey/BC/FAV14/2014 (A/H5N2) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI573298A/turkey/BC/FAV10/2014 (A/H5N2) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI586534A/chicken/BC/FAV22/2014 (A/H5N2) segment 4 (HA)3133.00.000000e+001701/1704 (99%)EPI590733A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI590719A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI590685A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI586542A/chicken/BC/FAV23/2014 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI586526A/chicken/BC/FAV21/2014 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI586493A/poultry/BC/FAV15/2014 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI585092A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI576470A/chicken/BC/FAV8/2014 (A/H5N2) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI590712A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI590699A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI590692A/chicken/Washington/3490-18/2015 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI587633A/chicken/Iowa/04-20/2015 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI586501A/poultry/BC/FAV17/2014 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI576477A/chicken/BC/FAV9/2014 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI573281A/turkey/Washington/61-22/2014 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI569383A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI586558A/chicken/BC/FAV25/2014 (A/H5N2) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI573271A/chicken/Washington/61-9/2014 (A/H5N2) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI620422A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI573276A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI620436A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI569390A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI569376A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI569372A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI620457A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI620450A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI620443A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI620415A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI587521A/American wigeon/BC/050-31/2015 (A/H5N8) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI585084A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI620429A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 4 (HA)3098.00.000000e+001695/1704 (99%)EPI588968A/chicken/Taiwan/a174/2015 (A/H5N3) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI573638A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI588960A/duck/Taiwan/a043/2015 (A/H5N2) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI573286A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI588976A/duck/Taiwan/a068/2015 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI553208A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 4 (HA)3066.60.000000e+001688/1702 (99%)EPI573208A/gadwall/Korea/H1351/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001690/1705 (99%)EPI561570A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI588952A/goose/Taiwan/a015/2015 (A/H5N8) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI585595A/baikal teal/Korea/2417/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI585589A/baikal teal/Korea/2399/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI585586A/baikal teal/Korea/1456/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI573242A/Common Teal/Korea/H844/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI561646A/breeder duck/Korea/H249/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI561626A/mallard/Korea/H207/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI561605A/broiler duck/Korea/H145/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI561591A/breeder duck/Korea/H128/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI561529A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI561508A/bean goose/Korea/H53/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI561341A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 4 (HA)3059.20.000000e+001689/1705 (99%)EPI585594A/baikal teal/Korea/2416/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585592A/baikal teal/Korea/2406/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585591A/baikal teal/Korea/2403/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585590A/baikal teal/Korea/2402/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585582A/baikal teal/Korea/1448/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585581A/baikal teal/Korea/1447/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585579A/baikal teal/Korea/1445/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585577A/baikal teal/Korea/1437/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI573199A/breeder chicken/Korea/H1068/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI573197A/chicken/Korea/H881/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI561674A/bean goose/Korea/H328/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI561612A/breeder duck/Korea/H158/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI561577A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI561563A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI561542A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI561522A/broiler duck/Korea/H65/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001688/1705 (99%)EPI585593A/baikal teal/Korea/2414/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI585587A/baikal teal/Korea/1457/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI585584A/baikal teal/Korea/1452/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI585583A/baikal teal/Korea/1449/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI561705A/bean goose/Korea/H40/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI561667A/mallard/Korea/H297/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001688/1706 (98%)EPI561653A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI561633A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI509704A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 4 (HA)3048.10.000000e+001687/1705 (98%)EPI585580A/baikal teal/Korea/1446/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI573200A/Korean native chicken/Korea/H1139/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI573196A/broiler duck/Korea/H651/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI573194A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561697A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561681A/tundra swan/Korea/H411/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561660A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561598A/broiler duck/Korea/H133/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561360A/broiler duck/Korea/H49/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561348A/broiler duck/Korea/H47/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561336A/broiler duck/Korea/H48/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561204A/broiler duck/Korea/H31/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561196A/broiler duck/Korea/H29/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI561187A/waterfowl/Korea/S005/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)EPI517161A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 4 (HA)3042.60.000000e+001686/1705 (98%)

LOCUS KT002473 1744 bp cRNA linear VRL 28-JUN-2015 DEFINITION Influenza A virus (A/turkey/Iowa/11762-1/2015(H5N2)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT002473 VERSION KT002473.1 GI:844311911 KEYWORDS . SOURCE Influenza A virus (A/turkey/Iowa/11762-1/2015(H5N2)) ORGANISM Influenza A virus (A/turkey/Iowa/11762-1/2015(H5N2)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1744) AUTHORS Killian,M.L., Gauger,P.C. and Yoon,K.-J. TITLE Direct Submission JOURNAL Submitted (02-JUN-2015) Diagnostic Virology Laboratory, National Veterinary Services Laboratories (NVSL), USDA APHIS VS, 1920 Dayton Avenue, Ames, IA 50010, USA COMMENT GenBank Accession Numbers KT002470-KT002477 represent sequences from the 8 segments of Influenza A virus (A/turkey/Iowa/11762-1/2015(H5N2)). ##Assembly-Data-START## Assembly Method :: SeqMan NGen v. 4.0 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1744 /organism="Influenza A virus (A/turkey/Iowa/11762-1/2015(H5N2))" /mol_type="viral cRNA" /strain="A/turkey/Iowa/11762-1/2015" /serotype="H5N2" /isolation_source="OP swab; pooled sample" /host="turkey; commercial" /db_xref="taxon:1662426" /segment="4" /country="USA: Buena Vista County, Iowa" /collection_date="12-Apr-2015" /collected_by="Dr. Terry Olson" /note="NVSL 15-011762; EP1; Eurasian origin (EA-H5N8 clade 2.3.4.4)-North American reassortant" gene 17..1720 /gene="HA" CDS 17..1720 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="AKN08961.1" /db_xref="GI:844311912" /translation="MEKIVLLFAVISLVKSDQICIGYHANNSTKQVDTIMEKNVTVTH AQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPA NDLCYPGTLNDYEELKHLLSRINHFEKTLIIPRSSWPNHETSLGVSAACPYQGAPSFF RNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAAEQTNLYKNPDTYVSVGT STLNQRLVPKIATRSQVNGQSGRMDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKG DSTIMKSEMEYGHCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLR NSPLRERRRKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPKYS EEAILKREEISGVKLESIGTYQILSIYSTVASSLALAIIVAGLSLWMCSNGSLQCRIC I" mat_peptide 65..1051 /gene="HA" /product="HA1" mat_peptide 1052..1717 /gene="HA" /product="HA2" ORIGIN 1 ggttcaatct gtcaaaatgg agaaaatagt gcttcttttt gccgtgatta gccttgttaa 61 aagtgatcag atttgcattg gttaccatgc aaacaactca acaaagcagg ttgacacgat 121 aatggagaaa aacgtcactg ttacacatgc ccaagacata ctggaaaaga cacacaacgg 181 gaagctctgc gatcttaatg gagtgaagcc cctgattcta aaggattgta gcgtagctgg 241 gtggctcctt ggaaatccaa tgtgcgacga gttcatcagg gtaccggaat ggtcttacat 301 cgtggagagg gctaacccag ccaacgacct ctgttaccca gggaccctca atgactatga 361 ggaactgaaa cacctattga gcagaataaa tcattttgag aaaactctga tcatccccag 421 gagttcttgg cccaatcatg aaacatcatt aggggtgagc gcagcatgtc cataccaggg 481 agcaccctca tttttcagaa atgtggtatg gctcatcaaa aagaacgatg catacccgac 541 aataaagata agctacaata ataccaatcg ggaagatctt ttgatactgt gggggattca 601 tcattccaac aatgcagcag agcagacaaa tctctataaa aacccagaca cttatgtttc 661 cgttgggaca tcaacattaa accagagatt ggtgccaaaa atagctacta gatcccaagt 721 aaacgggcag agtggaagaa tggatttctt ctggacaatt ttaaaaccga atgatgcaat 781 ccactttgag agtaatggaa atttcattgc tccagaatat gcatacaaaa ttgtcaagaa 841 aggggactca acaattatga aaagtgaaat ggagtatggc cactgcaaca ccaaatgtca 901 aactccaata ggggcgataa actctagcat gccattccac aatatacacc ctctcaccat 961 cggggaatgc cccaaatacg tgaagtcaaa caaattagtc cttgcgactg ggctcagaaa 1021 tagtcctcta agagaaagaa gaagaaaaag aggactattt ggagctatag cagggtttat 1081 agagggagga tggcagggaa tggtagacgg ttggtatggg tatcatcata gcaatgagca 1141 ggggagtggg tacgctgcag acaaagaatc aacccaaaag gcaatagatg gagttaccaa 1201 taaggtcaac tcaatcattg acaaaatgaa cactcaattt gaggccgttg gaagggaatt 1261 taataactta gaaaggagaa tagagaattt aaacaagaaa atggaagacg gattcctaga 1321 tgtctggact tataatgctg aacttttagt tctcatggaa aatgagagaa ctctagattt 1381 ccatgactca aatgtcaaga acctttacga caaagtccga ctacagctta gggataatgc 1441 aaaggagctg ggtaatggtt gtttcgagtt ctatcacaaa tgtgataacg aatgtatgga 1501 gagcgtaaga aatgggacgt atgactaccc taagtattca gaagaagcaa tattaaaaag 1561 agaagaaata agcggagtga aattagaatc aataggaact taccagatac tgtcaattta 1621 ttcaacagtg gcgagttccc tagcactggc aatcatagtg gctggtctat ctttatggat 1681 gtgctctaat gggtcgttac aatgcagaat ttgcatctaa atttgtgagc tcagattgta 1741 atta

APHIS releases A/turkey/Iowa/11762-1/2015 Fujian H5N2 sequences.

Liberia announces two more confirmed Ebola casesZoom Dosso, AFPJul. 1, 2015, 12:21 PM18facebook linkedin twitter email print Red cross workers wearing protective suits are seen carrying the body of an Ebola victim in Monrovia in January Monrovia (AFP) - Liberia said Wednesday a teenager who died of Ebola fever had spread the virus to at least two more people, confirming the first outbreak of the tropical disease for months. Health official Cestus Tarpeh told AFP the infected pair had been in physical contact with the 17-year-old Ebola victim before his death in a village near the country's international airport, around an hour's drive southeast of Monrovia. "We are still waiting for more results of blood tests," said Tarpeh, spokesman for the health department in Margibi County. He added that a herbalist who had treated the boy had evaded the authorities and was on the run. The news came a day after Health Minister Bernice Dahn announced the first case of Ebola in Liberia for around three months, warning that it was "likely that we will find additional cases". The new outbreak comes with the country still reeling from a nightmarish epidemic which wrecked its health service and economy and left 4,800 Liberians dead. Before the new cases Liberia had reported its last victim on March 20 and was declared Ebola-free by the World Health Organization on May 9. Local media reported that the 17-year-old had fallen ill on June 21 and died three days later, although this has not been confirmed by the government. There were no immediate details either on the two new cases, as epidemiologists scrambled Wednesday to trace and quarantine anyone else who may have had contact with the teenager. - 'So scared' - The country's neighbours Guinea and Sierra Leone are both still battling the outbreak, which has killed more than 11,200 people across west Africa, but the coastal Margibi County where the teenager died is nowhere near either border. The health ministry said it had no reason to believe the teenager had visited either country and the source of his infection remains a mystery. US Assistant Secretary of State for African Affairs Linda Thomas-Greenfield told a news conference broadcast online from Washington the new Ebola death was "a warning to us that the job is not done". Residents in Monrovia, a crowded chaotic city of around one million people, spoke of their fears that the Margibi outbreak would develop into a full-blown epidemic. "I am scared -- I am so scared that I don't even know where to start," said Jeneba Freeman, 45, a stallholder in the capital's Redlight market. Ebola is spread among humans via the bodily fluids of recently deceased victims and people showing symptoms of the tropical fever, which include vomiting, diarrhoea and -- in the worst cases -- massive internal haemorrhaging and external bleeding. Experts are speculating that the latest victim could have been infected by an entirely new variation of the virus from an animal such as a fruit bat rather than by a human. A more worrying possibility is that clusters of Ebola continue to smoulder under the surface, far from the gaze of local or international health authorities. - Infectious bodies - "We heard on radio that Ebola has turned around to come back to Liberia," said Samanta Blamo, 55, another stallholder at the Redlight market, where buckets of chlorinated water began to appear on Wednesday. "This is why we are bringing our Ebola buckets. We were still washing our hands but only few buckets were here. Now everybody has one again, just like the way it was in 2014." During the months of peak transmission from August to November last year Liberia was the setting for some of the most shocking scenes from the outbreak, by far the worst in history. The country was reporting more than 300 new cases a week, with uncollected and highly infectious bodies piling up in the streets of Monrovia. The health system -- embryonic before the crisis, with some 50 doctors and 1,000 nurses for 4.3 million people -- was devastated, losing 192 health workers out of 378 infected. Schools remained shut after the summer holidays, unemployment soared as the formal and black-market economies collapsed and clinics closed as staff died and non-emergency healthcare ground to a halt. Parents found themselves on Wednesday mulling the dilemma of whether to curtail the end of an already hugely disrupted school year by keeping their children at home. Patricia Sleboh, a mother-of-three, told AFP she would rather keep her children from classes than risk "losing them to Ebola". Read more: http://www.businessinsider.com/afp-liberia-announces-two-more-confirmed-ebola-cases-2015-7#ixzz3efkXPN6m

Two contacts of new Ebola index case in Liberia are Ebola confirmed.

Liberia: Ebola Mystery - Dog Meat Story Eclipses Border Lapse TheoryTagged:EbolaHealthLiberiaWest Africa RELATED TOPICSEbolaLiberia: Govt Investigates New Ebola Source Liberia:  UN Hails Ellen's Leadership in Ebola Fight Liberia: Remaining Resolved Against Any Attempt of Ebola Recurrence West Africa: Mano River Union Summit in Guinea Focuses On Priority Areas HealthUganda: Army Hospital Keeps Drugs On Floor South Africa: The Best Time for Marathon Runners to Get On the Road Uganda: Expectant Mothers Deserve Decent Care Uganda: MPs to Endorse HIV Trust Fund LiberiaLiberia: 'Constitutional Contempt' - Lower House Summons President Liberia: Discrimination At Work Places Liberia: Ellen Summoned By Lawmakers Liberia: Power Showdown West AfricaNigeria: Court Clears Fani-Kayode of Corruption Charges Nigeria: Oil Sector Reforms - Buhari May Scrap Some Govt Agencies Nigeria: Women, Girls Trained as Suicide Bombers in 'Rehabilitation' Sierra Leone: CGG Engages CSOs On Constitutional Review Process By Samwar S. FallahThe source of Liberia's new confirmed case of the deadly Ebola virus remains unknown with the professed strong surveillance network of the Ministry of Health unable to identify any clue since the death of patient zero on June 27, nearly a week ago. Liberia was officially declared Ebola free on May 9 by the World Health organization with assurances from officials of the Ministry of Health that the right system has now been put in place to quickly detect any new emergence of the killer virus. More than 11,000 people have died of the disease since December 2013, the vast majority of them in Liberia, Guinea and Sierra Leone. But it has all turned out to be a hectic task for the country as the source of the virus which was confirmed positive in the specimen of a 17 year old boy who died before his status was known remains unknown. According to Assistant Minister of Health for Curative and Preventive Services, Deputy Minister Designate of the Ministry of Health for Surveillance and Disease Control they are conducting investigation as there is no trace of the deceased travel outside Liberia prior to his death. "We know the community where the case came from but what we don't know is the epic link or chain of transmission and we don't also know the source of transmission. This is what we are investigating", said Neynswah. Dog meat eating While the Ministry of Health is still sweating over finding out the source of the new Ebola case, in the village of Nedowein in Margibi County, some 30 miles from the capital, Monrovia, villagers are confused same as health officials, as a team of health workers from the Ministry of Health, the African Union Ebola mission (ASEOWA) all gathered on the main motor road in front of the village. Ebola Virus Disease Victim Burial A team of FrontPageAfrica reporters visiting the area of the latest casualty noticed several jeeps and officials from the U.S. Center for Disease Control and the African Union monitors in chatters with residents as they sought to get to the bottom of how Ebola clawed its way back to Liberia. In the village, what appears to be the inability of the government to provide essential information on the source of the virus has now led to speculations with news that the deceased and others ate a rotten dog meat. According to sources in the village the 17-year old boy along with others exhumed the body of dead dog that had been buried and used it for meal. Although animals to human transmission is one major source of the deadly virus but domestic animals such as dog are yet to be established as one of the modes of transmission of Ebola. In its effort to trace the source of the virus the Ministry of Health looks to be heavily relying on the dog eating news from villagers. Accordingly a friend to the deceased also a teenager has fallen sick after eating the dog meat along with his late friend and others. A pregnant woman who is believed to have cooked the dog is also said to be sick. Fear grips C. H. Rennie Hospital In Kakata, Margibi County at the C.H. Rennie Hospital, the only referral in the county, specimen from a suspected patient was transferred to the Bong County Ebola laboratory for testing, a senior nurse at the hospital confirmed to FrontPageAfrica Tuesday morning. On Tuesday, fear gripped workers at the hospital with Ebola preventive measures reintroduced especially thorough screening of people entering and leaving the hospital with nurses were suited in their Personal Protective Equipment. Angeline Kollie, a 23 year-old practicing nurse expressed fear over the suspected case observed at the hospital and said she hopes it proves negative. "I pray to God for it to be negative because we know what Ebola did to this country, we don't want it to come back", she said. The practicing nurse said although they are aware of the preventive measures, but Ebola is normally very difficult to put under control. "Of course we understand the preventive measures but you know this virus is hard to deal with, so all we need to do is to pray for it to not return", she said. Like Angeline, other nurses at the hospital expressed fear over the suspected case of Ebola. The C.H. Rennie hospital was one of the hardest hit medical facilities during the peak of the Ebola outbreak in Liberia in 2014 where several health workers contracted the virus and some died. http://allafrica.com/stories/201507011303.html

AlignSegment-IDNameScoreE-ValueIdentityEPI620454A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 8 (NS)1548.60.000000e+00838/838 (100%)EPI620461A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI620447A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI620440A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI620433A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI620426A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI620419A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI620412A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI590689A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI587637A/chicken/Iowa/04-20/2015 (A/H5N2) segment 8 (NS)1543.10.000000e+00837/838 (99%)EPI590744A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI590737A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI590723A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI590716A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI569366A/turkey/Washington/61-22/2014 (A/H5N2) segment 8 (NS)1537.50.000000e+00836/838 (99%)EPI586554A/chicken/BC/FAV24/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI586538A/chicken/BC/FAV22/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI586522A/chicken/BC/FAV20/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI586514A/poultry/BC/FAV19/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585671A/baikal teal/Korea/2417/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585670A/baikal teal/Korea/2416/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585669A/baikal teal/Korea/2414/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585667A/baikal teal/Korea/2403/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585666A/baikal teal/Korea/2402/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585664A/baikal teal/Korea/1458/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585663A/baikal teal/Korea/1457/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585660A/baikal teal/Korea/1452/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585657A/baikal teal/Korea/1447/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585656A/baikal teal/Korea/1446/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585655A/baikal teal/Korea/1445/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585653A/baikal teal/Korea/1437/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI585096A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI576474A/chicken/BC/FAV8/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI569394A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI569387A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI569363A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI569361A/chicken/Washington/61-9/2014 (A/H5N2) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI568703A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI568700A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561713A/broiler duck/Korea/H31/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561701A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561694A/common teal/Korea/H455-30/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561685A/tundra swan/Korea/H411/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561678A/bean goose/Korea/H328/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561671A/mallard/Korea/H297/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561664A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561657A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561630A/mallard/Korea/H207/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561623A/breeder duck/Korea/H200/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561574A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561560A/Coot/Korea/H81/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561553A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561533A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561519A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561345A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI561200A/broiler duck/Korea/H29/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI542634A/mallard/Korea/W452/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI509757A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI509712A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 8 (NS)1532.00.000000e+00835/838 (99%)EPI590730A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI590709A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI587525A/American wigeon/BC/050-31/2015 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI586562A/chicken/BC/FAV25/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI586546A/chicken/BC/FAV23/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI586530A/chicken/BC/FAV21/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI586505A/poultry/BC/FAV17/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI585668A/baikal teal/Korea/2406/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI585665A/baikal teal/Korea/2399/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI585661A/baikal teal/Korea/1454/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI585659A/baikal teal/Korea/1449/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI585658A/baikal teal/Korea/1448/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI585654A/baikal teal/Korea/1441/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI584083A/turkey/BC/FAV14/2014 (A/H5N2) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561650A/breeder duck/Korea/H249/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561609A/broiler duck/Korea/H145/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561602A/broiler duck/Korea/H133/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561595A/breeder duck/Korea/H128/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561581A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561546A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561364A/bean goose/Korea/H40/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561357A/broiler duck/Korea/H48/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561352A/broiler duck/Korea/H47/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI561191A/waterfowl/Korea/S005/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI554604A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI553471A/wigeon/Sakha/1/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI552750A/turkey/Germany/R2474-L00899/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI548628A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI548428A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 8 (NS)1526.50.000000e+00834/838 (99%)EPI590696A/chicken/Washington/3490-18/2015 (A/H5N2) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI588956A/goose/Taiwan/a015/2015 (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI586497A/poultry/BC/FAV15/2014 (A/H5N2) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI585662A/baikal teal/Korea/1456/2014 (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI576481A/chicken/BC/FAV9/2014 (A/H5N2) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI573642A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI573302A/turkey/BC/FAV10/2014 (A/H5N2) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI561637A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI561616A/breeder duck/Korea/H158/2014 (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI561567A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI561512A/bean goose/Korea/H53/2014 (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)EPI558013A/duck/England/36038/14 (A/H5N8) segment 8 (NS)1520.90.000000e+00833/838 (99%)