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Pandemic Potentials Blog

25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas

Featured Replies

 

CDC has released (at GISAID) 25 UK variant (B.1.1.7) sequences collected Jan 7-25

USA/TX-CDC-9NPP-9158/2021 1/7 49F Texas
USA/TX-CDC-9MNS-8885/2021 1/18 Texas
USA/TX-CDC-9MNX-8886/2021 1/19 Texas 
USA/TX-CDC-9N2I-8991/2021 1/20 32 Texas
USA/TX-CDC-9N2D-8990/2021 1/20 14 Texas 
USA/TX-CDC-9N1Y-8987/2021 1/20 30 Texas
USA/TX-CDC-9N2S-8993/2021 1/22 28 Texas
USA/TX-CDC-9N3H-8998/2021 1/23 28 Texas 
USA/TX-CDC-9N3W-9001/2021 1/25 22 Texas 
USA/TX-CDC-9N1E-8983/2021 1/20 7 Texas 
USA/TX-CDC-9N1O-8985/2021 1/21 17 Texas
USA/TX-CDC-9N41-9002/2021 1/25 76 Texas
USA/TX-CDC-9N23-8988/2021 1/21 51 Texas
USA/TX-CDC-9N37-8996/2021 1/23 32 Texas 
USA/TX-CDC-9N3R-9000/2021 1/25 6 Texas
USA/TX-CDC-9N2X-8994/2021 1/23 24 Texas 
USA/TX-CDC-9N46-9003/2021 1/25 80 Texas
USA/TX-CDC-9N0Z-8980/2021 1/20 3 Texas
USA/TX-CDC-9N4B-9004/2021 1/25 78 Texas
USA/TX-CDC-9N1T-8986/2021 1/21 32 Texas
USA/TX-CDC-9N0P-8978/2021 1/20 33 Texas 
USA/TX-CDC-9N19-8982/2021 1/20 3 Texas
USA/TX-CDC-9N1J-8984/2021 1/20 3 Texas
USA/TX-CDC-9N14-8981/2021 1/20 26 Texas
USA/TX-CDC-9N32-8995/2021 1/23 44 Texas 

  • Author

45 cases of the U.K. variant had been identified in Texas as of Feb. 12.

Region 2/3 (includes Dallas-Fort Worth) – 9 cases
Region 6/5S (includes Houston) – 20 cases
Region 7 (includes Temple) – 11 cases
Region 8 (includes San Antonio) – 4 cases
Region 11 (includes Laredo) – 1 case
(Source: Texas Department of State Health Services)
https://www.dallasnews.com/news/2021/02/13/cases-of-more-contagious-uk-variant-are-seeing-rapid-growth-in-texas/

  • Author

USA/TX-CDC-9NPP-9158/2021 1/7 49F Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.
 

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=28.894338943386078%2C-99.3659595194552&z=8

  • Author

USA/TX-CDC-9N2I-8991/2021 1/20 32 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=28.894338943386078%2C-99.3659595194552&z=8

  • Author

USA/TX-CDC-9N2D-8990/2021 1/20 14 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=28.894338943386078%2C-99.3659595194552&z=8

  • Author

USA/TX-CDC-9N1Y-8987/2021 1/20 30 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N2S-8993/2021 1/22 28 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N3H-8998/2021 1/23 28 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N3W-9001/2021 1/25 22 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N1E-8983/2021 1/20 7 Texas   matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N1O-8985/2021 1/21 17 Texas   matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N41-9002/2021 1/25 76 Texas   matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N23-8988/2021 1/21 51 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N37-8996/2021 1/23 32 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8

  • Author

USA/TX-CDC-9N3R-9000/2021 1/25 6 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N2X-8994/2021 1/23 24 Texas   matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N46-9003/2021 1/25 80 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N0Z-8980/2021 1/20 3 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N4B-9004/2021 1/25 78 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N1T-8986/2021 1/21 32 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N0P-8978/2021 1/20 33 Texas   matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N19-8982/2021 1/20 3 Texas   matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N1J-8984/2021 1/20 3 Texas   matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

  • Author

USA/TX-CDC-9N14-8981/2021 1/20 26 Texas  matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8.

map update

https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=33.00865917149453%2C-97.79346971631645&z=8

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