niman Posted February 19, 2017 Report Share Posted February 19, 2017 (edited) Guangzhou Institute of Respiratory Disease has released a full set of H7N9 sequences from a fatal case in Qingyuan, Guangdong. The H5 has the same polybasic cleavage site, KRKRTAR seen in the case from Taiwan ex-Guangdong Province. Edited February 21, 2017 by niman Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Isolate name: A/Qingyuan/GIRD1/2017 Isolate ID: EPI_ISL_249102 Passage details/history: Type: A / H7N9 Lineage: Sample information Collection date: 2017-01-14 Host Human Additional host information: Zip code: Patient status: Deceased Last vaccinated: In-vivo pathogenicity test: Location: China / Guangdong Province Additional location information: Patient age: 56 Year(s) Gender: Male Outbreak: Sporadic Treatment: Treatment by Oseltamivir Specimen source: Tracheal Institute information Originating lab: State Key Laboratory of Reipiratory Disease (Guangzhou Medical University) Sample ID given by the sample provider: Address: State Key Laboratory of Reipiratory Disease (Guangzhou Medical University) 195, Dongfengxi Road, Yuexiu District, Guangzhou, Guangdong Province, China, Guangzhou China Submitting lab: guangzhou institute of respiratory disease Sample ID given by the submitting laboratory: Authors: Wenda Guan,PhD; Wenjun Song,PhD; Jianfeng He,MD; Changwen Ke,MD; Zifeng Yang,PhD; Haibo Zhou,MD; Qinhan Lin,MD; Yonghui Zhang,MD; Nanshan Zhong,MD Address: guangzhou institute of respiratory disease 1 kangda road, guangzhou China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Qingyuan/GIRD1/2017 2341 EPI918730 PB1 A/Qingyuan/GIRD1/2017 2341 EPI918732 PA A/Qingyuan/GIRD1/2017 2233 EPI918734 HA A/Qingyuan/GIRD1/2017 1744 EPI918736 NP A/Qingyuan/GIRD1/2017 1565 EPI918737 NA A/Qingyuan/GIRD1/2017 1444 EPI918738 MP A/Qingyuan/GIRD1/2017 1027 EPI918739 NS A/Qingyuan/GIRD1/2017 890 EPI918740 Submitter information Submitter: guan, wenda Submission Date: 2017-02-19 Last modifier: guan, wenda Last modified: 2017-02-19 Address: guangzhou institute of respiratory disease 1 kangda road, guangzhou China Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Align Segment-ID Name Score E-Value Identity EPI918736 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 4 (HA) 3131.2 0.000000e+00 1695/1695 (100%) EPI917065 A/Taiwan/1/2017 (A/H7N9) segment 4 (HA) 3081.3 0.000000e+00 1686/1695 (99%) EPI507710 A/turkey/Italy/4828/1999 (A/H7N1) segment 4 (HA) 2350.1 0.000000e+00 1562/1703 (91%) EPI68427 A/turkey/Italy/4708/1999 (A/H7N1) segment 4 (HA) 2350.1 0.000000e+00 1562/1703 (91%) EPI63296 A/quail/Italy/396/2000 (A/H7N1) segment 4 (HA) 2346.4 0.000000e+00 1562/1704 (91%) EPI507734 A/turkey/Italy/4756/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI507718 A/turkey/Italy/4827/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI507702 A/turkey/Italy/4618/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI505580 A/chicken/Italy/4845/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107393 A/ostrich/Italy/984/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107376 A/ostrich/Italy/984/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107357 A/chicken/Italy/5093/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107338 A/chicken/Italy/5093/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI69101 A/turkey/Italy/4617/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI69063 A/chicken/Italy/4789/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI68218 A/turkey/Italy/1084/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI63258 A/chicken/Italy/4746/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI60747 A/duck/Italy/551/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI60386 A/turkey/Italy/4580/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI58714 A/ostrich/Italy/1038/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12992 A/Turkey/Italy/335/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12990 A/Turkey/Italy/13468/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12984 A/Turkey/Italy/13467/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12982 A/Chicken/Italy/13307/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12980 A/chicken/Italy/13474/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12884 A/turkey/Italy/12598/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI505858 A/guinea fowl/Italy/1766/2000 (A/H7N1) segment 4 (HA) 2340.8 0.000000e+00 1561/1704 (91%) EPI651420 A/chicken/Italy/445 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI505601 A/turkey/Italy/5005/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI505582 A/chicken/Italy/4911/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI505581 A/turkey/Italy/4906/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI353345 A/chicken/Italy/445/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI319892 A/Netherlands/086/03 (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1557/1698 (91%) EPI294949 A/chicken/Netherlands/03008344/03(H7N7) (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI290279 A/chicken/Netherlands/03005432/03(H7N7) (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI242904 A/chicken/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI242903 A/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI237858 A/chicken/Netherlands/03009938/03 (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI237816 A/chicken/Netherlands/03010351/03 (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI69044 A/quail/Italy/4992/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI68199 A/chicken/Italy/2335/2000 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI13148 A/chicken/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI505640 A/turkey/Italy/140/2000 (A/H7N1) segment 4 (HA) 2337.1 0.000000e+00 1560/1704 (91%) EPI294973 A/chicken/Netherlands/03008200/03(H7N7) (A/H7N7) segment 4 (HA) 2337.1 0.000000e+00 1558/1700 (91%) EPI294958 A/chicken/Netherlands/03008374/03(H7N7) (A/H7N7) segment 4 (HA) 2337.1 0.000000e+00 1558/1700 (91%) EPI237855 A/chicken/Netherlands/03009127/03 (A/H7N7) segment 4 (HA) 2337.1 0.000000e+00 1558/1700 (91%) EPI505851 A/chicken/Italy/1730/2000 (A/H7N1) segment 4 (HA) 2335.3 0.000000e+00 1560/1704 (91%) EPI505603 A/chicken/Italy/5074/1999 (A/H7N1) segment 4 (HA) 2335.3 0.000000e+00 1557/1699 (91%) EPI304486 A/chicken/belgium/06601/2003 (A/H7N7) segment 4 (HA) 2335.3 0.000000e+00 1557/1699 (91%) EPI507726 A/turkey/Italy/4749/1999 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI505811 A/chicken/Italy/1651/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1559/1703 (91%) EPI505781 A/chicken/Italy/933/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1558/1702 (91%) EPI505703 A/chicken/Italy/797/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI319946 A/Netherlands/295/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1556/1698 (91%) EPI304477 A/chicken/belgium/06383/2003 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI304468 A/chicken/belgium/06175/2003 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295048 A/chicken/Netherlands/03013833/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295045 A/chicken/Netherlands/03012010/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295042 A/chicken/Netherlands/03012012/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295024 A/chicken/Netherlands/03008331/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI294976 A/chicken/Netherlands/03009080/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI294952 A/chicken/Netherlands/03008381/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI294910 A/chicken/Netherlands/03002974/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290444 A/chicken/Netherlands/03012785/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290438 A/chicken/Netherlands/03012011/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290435 A/chicken/Netherlands/03011061/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290432 A/turkey/Netherlands/03010737/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290426 A/turkey/Netherlands/03010495/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290381 A/chicken/Netherlands/03009831/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290285 A/chicken/Netherlands/03003441/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290273 A/chicken/Netherlands/03008059/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290228 A/chicken/Netherlands/03003325/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290225 A/chicken/Netherlands/03003403/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290189 A/chicken/Netherlands/03002994/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI238415 A/Turkey/Italy/13489/99 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI237887 A/turkey/Netherlands/03010821/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237810 A/chicken/Netherlands/03013531/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237807 A/chicken/Netherlands/03013010/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237804 A/turkey/Netherlands/03012387/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237801 A/chicken/Netherlands/03012013/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237798 A/chicken/Netherlands/03011766/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237795 A/chicken/Netherlands/UN242/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237792 A/chicken/Netherlands/03011236/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237789 A/chicken/Netherlands/03012915/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237787 A/chicken/Netherlands/03009939/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237784 A/chicken/Netherlands/03007917/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237673 A/turkey/Netherlands/03010350/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI63277 A/guinea fowl/Italy/155/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1561/1705 (91%) EPI43057 A/chicken/Italy/1285/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1559/1703 (91%) EPI505875 A/quail/Italy/1764/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1559/1704 (91%) EPI505809 A/goose/Italy/1310/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1559/1704 (91%) EPI60690 A/turkey/Italy/2984/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1561/1706 (91%) EPI505779 A/guineafowl/Italy/918/2000 (A/H7N1) segment 4 (HA) 2327.9 0.000000e+00 1560/1705 (91%) EPI319979 A/Netherlands/306/03 (A/H7N7) segment 4 (HA) 2327.9 0.000000e+00 1555/1698 (91%) EPI319868 A/Netherlands/076/03 (A/H7N7) segment 4 (HA) 2327.9 0.000000e+00 1555/1698 (91%) EPI295030 A/chicken/Netherlands/03009890/03(H7N7) (A/H7N7) segment 4 (HA) 2327.9 0.000000e+00 1557/1701 (91%) EPI294994 A/chicken/Netherlands/03009124/03(H7N7) (A/H7N7) segment 4 (HA) 2327.9 0.000000e+00 1557/1701 (91%) EPI294988 A/chicken/Netherlands/03009120/03(H7N7) (A/H7N7) segment 4 (HA) 2327.9 0.000000e+00 1557/1701 (91%) EPI294982 A/chicken/Netherlands/03009044/03(H7N7) (A/H7N7) segment 4 (HA) 2327.9 0.000000e+00 1557/1701 (91%) EPI294955 A/chicken/Netherlands/03008379/03(H7N7) (A/H7N7) segment 4 (HA) 2327.9 0.000000e+00 1557/1701 (91%) Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Align Segment-ID Name Score E-Value Identity EPI918738 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI627232 A/Fujian/23/2015 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1389/1399 (99%) EPI627384 A/Guangdong/02497/2014 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI627216 A/Fujian/25/2015 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI627024 A/Guangdong/15SF027/2015 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI627000 A/Guangdong/15SF080/2015 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI769577 A/Fujian/16/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI628807 A/Fujian/27/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI628695 A/Guangdong/15SF055/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627312 A/Fujian/8/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627296 A/Fujian/19/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627264 A/Guangdong/15SF021/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627104 A/Fujian/17/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627048 A/Guangdong/15SF081/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI580389 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI580381 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI566130 A/Fujian/09273/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI769569 A/Fujian/10/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628687 A/Guangdong/15SF054/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628655 A/Environment/Hunan/20986/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628631 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628583 A/Environment/Anhui/33248/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627256 A/Fujian/7/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627224 A/Fujian/24/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627120 A/Guangdong/15SF030/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627112 A/Guangdong/15SF043/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627096 A/Jiangsu/19758/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627040 A/Fujian/6/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627008 A/Jiangsu/19757/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI566083 A/Guizhou/03240/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI683029 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628743 A/Anhui/33224/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628663 A/Anhui/33227/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628639 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628623 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628591 A/Environment/Anhui/33240/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628575 A/Environment/Anhui/33250/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627472 A/Fujian/1/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627456 A/Fujian/3/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627304 A/Fujian/11/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627168 A/Zhejiang/4/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627088 A/Hunan/19763/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627080 A/Hunan/19762/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI692616 A/Huai'an/002/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628823 A/Zhejiang/10/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628775 A/Zhejiang/7/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627464 A/Fujian/2/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627288 A/Fujian/20/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627192 A/Guangdong/15SF020/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI729461 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI692626 A/chicken/Huai'an/003/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI683028 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI683027 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628751 A/Anhui/33225/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628727 A/Anhui/33228/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628607 A/Environment/Anhui/39280/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI593638 A/chicken/Jiangxi/19463/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI593625 A/chicken/Jiangxi/19426/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI593383 A/chicken/Jiangxi/18008/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592610 A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592594 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592579 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592570 A/chicken/Jiangxi/13540/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592534 A/chicken/Jiangxi/13526/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592526 A/chicken/Jiangxi/13525/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592517 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592510 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592486 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592462 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592283 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592246 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI521919 A/Taiwan/2/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627480 A/Fujian/17/2014 (A/H7N9) segment 6 (NA) 2490.4 0.000000e+00 1382/1399 (98%) EPI729453 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707902 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI628567 A/Anhui/40095/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627919 A/Xinjiang/73030/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627911 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627440 A/Anhui/01887/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627240 A/Fujian/21/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627160 A/Zhejiang/3/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593583 A/chicken/Jiangxi/18524/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593543 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593453 A/chicken/Jiangxi/18470/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593400 A/chicken/Jiangxi/18035/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593132 A/chicken/Jiangxi/14502/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592276 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707983 A/chicken/Shanghai/S3086/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707982 A/chicken/Shanghai/S3085/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707981 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707904 A/duck/Jiangsu/J3619/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627488 A/Fujian/19/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627352 A/Environment/Xinjiang/00347/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627344 A/Environment/Xinjiang/00344/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627280 A/Fujian/9/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593526 A/chicken/Jiangxi/18500/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593255 A/chicken/Jiangxi/15492/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593176 A/chicken/Jiangxi/14530/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593169 A/chicken/Jiangxi/14518/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI566099 A/XinjiangBintuan/99117/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98% Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Align Segment-ID Name Score E-Value Identity EPI918739 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI917068 A/Taiwan/1/2017 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI682977 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI681159 A/chicken/Zhejiang/727192/2014 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI682978 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628747 A/Anhui/33225/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627260 A/Guangdong/15SF021/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627212 A/Fujian/25/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627132 A/Zhejiang/1/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627108 A/Guangdong/15SF043/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627044 A/Guangdong/15SF081/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627012 A/Jiangsu/18828/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593614 A/chicken/Jiangxi/18527/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593576 A/chicken/Jiangxi/18523/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593551 A/chicken/Jiangxi/18515/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593513 A/chicken/Jiangxi/18491/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593479 A/chicken/Jiangxi/18483/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593472 A/chicken/Jiangxi/18482/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593430 A/chicken/Jiangxi/18466/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593408 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI566071 A/Jiangsu/06306/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI895154 A/chicken/Ganzhou/GZ50/2015 (A/H5N6) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888055 A/Anhui/60935/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888047 A/Anhui/60934/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888039 A/Anhui/60933/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888031 A/Anhui/60931/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888015 A/Anhui/60929/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888007 A/Anhui/60928/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI887959 A/Jiangsu/60450/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI887703 A/Zhejiang/7/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI846042 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI838162 A/chicken/Jiangsu/SIC42/2015 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI838159 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI833717 A/Fujian/3/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI769578 A/Fujian/16/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI769570 A/Fujian/10/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI740733 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI729782 A/chicken/Shanghai/15/2015 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI729462 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI729454 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI682985 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI681155 A/chicken/Zhejiang/3C34/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI680963 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI680962 A/chicken/Zhejiang/C71921/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628811 A/Zhejiang/11/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628555 A/Anhui/40094/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627308 A/Fujian/8/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627292 A/Fujian/19/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627252 A/Fujian/7/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627148 A/Zhejiang/34/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627140 A/Zhejiang/35/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593441 A/chicken/Jiangxi/18468/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI583126 A/chicken/Shaoxing/5186/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI566126 A/Fujian/09273/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI531804 A/Taiwan/2/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI529239 A/wild chicken/Shanghai/C1/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888023 A/Anhui/60932/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887983 A/Anhui/60927/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887887 A/Jiangsu/60461/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887879 A/Jiangsu/60462/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887863 A/Jiangsu/60465/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887799 A/Zhejiang/6/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI846034 A/chicken/Anhui/AH120/2015 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI838148 A/chicken/Shandong/SIC24/2014 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI769642 A/Fujian/22/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI769586 A/Fujian/18/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI682983 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI682982 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI681154 A/chicken/Zhejiang/3C28/2014 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI680978 A/chicken/Zhejiang/C58/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI680959 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI639590 A/chicken/Hangzhou/174/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628787 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628779 A/Shandong-Taian/01/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628675 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628667 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628603 A/Environment/Anhui/39280/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628563 A/Anhui/40095/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628547 A/Environment/Hunan/39719/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627356 A/Fujian/5/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627220 A/Fujian/24/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627156 A/Zhejiang/3/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627100 A/Fujian/17/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI621117 A/chicken/Quzhou/2/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI602002 A/black chicken/Jiangxi/10139/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI601992 A/black chicken/Jiangxi/10136/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI601974 A/chicken/Jiangxi/10122/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI601533 A/chicken/Jiangxi/23772/2013 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI599582 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI594412 A/chicken/Rizhao/2658/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI594363 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593565 A/chicken/Jiangxi/18517/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593273 A/chicken/Jiangxi/15520/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593256 A/chicken/Jiangxi/15492/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593133 A/chicken/Jiangxi/14502/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI592006 A/silkie chicken/Shaoxing/5371/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI583857 A/chicken/Rizhao/3052/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI583638 A/chicken/Dongguan/3186/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI576626 A/environment/Shanghai/PD-JZ-01/2014 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI566079 A/Guizhou/03240/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99% Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Align Segment-ID Name Score E-Value Identity EPI918730 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI578196 A/chicken/Dongguan/1674/2014 (A/H9N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%) EPI872955 A/Hong Kong/VB16189623/2016 (A/H7N9) segment 1 (PB2) 4050.8 0.000000e+00 2252/2281 (98%) EPI837987 A/chicken/Sichuan/SIC36/2014 (A/H9N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI601321 A/chicken/Jiangxi/1255/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI600087 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI600052 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI599500 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI599458 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI599423 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI593590 A/chicken/Jiangxi/18526/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI593568 A/chicken/Jiangxi/18523/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI593518 A/chicken/Jiangxi/18500/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI593502 A/chicken/Jiangxi/18491/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI593482 A/chicken/Jiangxi/18486/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI593420 A/chicken/Jiangxi/18466/2014 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%) EPI623615 A/chicken/Hubei/2014 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI602117 A/chicken/Jiangxi/18474/2013 (A/H0) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI602083 A/chicken/Jiangxi/20471/2013 (A/H0) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI600101 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI600073 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599528 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599493 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599472 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599465 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599444 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599416 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599408 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599394 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI599387 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI593443 A/chicken/Jiangxi/18470/2014 (A/H0) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI593394 A/chicken/Jiangxi/18035/2014 (A/H0) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI578056 A/chicken/Jiangxi/33621/2013 (A/H0) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI736582 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2249/2281 (98%) EPI602064 A/chicken/Jiangxi/19967/2013 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601970 A/chicken/Jiangxi/1271/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601930 A/chicken/Jiangxi/25941/2013 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601920 A/chicken/Jiangxi/23273/2013 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601892 A/chicken/Jiangxi/1286/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601604 A/chicken/Jiangxi/1288/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601593 A/chicken/Jiangxi/1218/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601363 A/chicken/Jiangxi/1242/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601354 A/chicken/Jiangxi/1226/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601262 A/chicken/Jiangxi/1269/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI600108 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI600080 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI600066 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599814 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599747 A/chicken/Jiangxi/31856/2013 (A/H10N8) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599521 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599514 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599507 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599486 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599479 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599437 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599430 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599401 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI593410 A/chicken/Jiangxi/18457/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI537478 A/chicken/B15/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI537469 A/chicken/77/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601486 A/chicken/Jiangxi/36274/2013 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601332 A/chicken/Jiangxi/1257/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI683196 A/duck/Wuhan/WHYF14/2014 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI602461 A/chicken/Jiangxi/3152/2014 (A/H10N8) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI602354 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI601024 A/chicken/Jiangxi/1289/2014 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI600293 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI600279 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI600094 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI600059 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599786 A/chicken/Jiangxi/36226/2013 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599733 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599577 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599451 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI594358 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI593629 A/chicken/Jiangxi/19463/2014 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI593346 A/chicken/Shantou/4832/2014 (A/H7N9) segment 1 (PB2) 4028.7 0.000000e+00 2248/2281 (98%) EPI591968 A/chicken/Suzhou/4833/2013 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI589864 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI583824 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI557811 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI530391 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI601871 A/chicken/Jiangxi/36242/2013 (A/H0) segment 1 (PB2) 4026.8 0.000000e+00 2246/2280 (98%) EPI601475 A/chicken/Jiangxi/36256/2013 (A/H0) segment 1 (PB2) 4026.8 0.000000e+00 2246/2280 (98%) EPI596740 A/chicken/Jiangxi/30801/2013 (A/H0) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI858163 A/Environment/Jiangxi/14737/2014 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601911 A/chicken/Jiangxi/23241/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601543 A/chicken/Jiangxi/36240/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601301 A/chicken/Jiangxi/1247/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601211 A/chicken/Jiangxi/36293/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599570 A/chicken/Jiangxi/29086/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599373 A/duck/Jiangxi/36505/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI596731 A/chicken/Jiangxi/29132/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI593353 A/chicken/Shantou/4833/2014 (A/H7N9) segment 1 (PB2) 4023.1 0.000000e+00 2247/2281 (98%) EPI583817 A/chicken/Suzhou/4837/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI583810 A/chicken/Suzhou/4822/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI578065 A/chicken/Jiangxi/36277/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI530485 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI530479 A/Environment/Jiangxi/03481/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI530415 A/Environment/Jiangxi/10615/2014 (A/H10N8) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 E627K Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Align Segment-ID Name Score E-Value Identity EPI918732 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 2 (PB1) 4193.0 0.000000e+00 2270/2270 (100%) EPI578211 A/chicken/Dongguan/1693/2014 (A/H0) segment 2 (PB1) 4037.9 0.000000e+00 2242/2270 (98%) EPI578197 A/chicken/Dongguan/1674/2014 (A/H9N2) segment 2 (PB1) 4037.9 0.000000e+00 2242/2270 (98%) EPI627375 A/Fujian/21/2014 (A/H7N9) segment 2 (PB1) 4021.3 0.000000e+00 2239/2270 (98%) EPI594289 A/chicken/Jiangxi/10955/2014 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2237/2271 (98%) EPI601498 A/chicken/Jiangxi/36278/2013 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI599787 A/chicken/Jiangxi/36226/2013 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI594352 A/chicken/Jiangxi/10965/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594345 A/chicken/Jiangxi/10964/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594317 A/chicken/Jiangxi/10959/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594310 A/chicken/Jiangxi/10958/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594296 A/chicken/Jiangxi/10956/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594282 A/chicken/Jiangxi/10954/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594268 A/chicken/Jiangxi/10950/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594247 A/chicken/Jiangxi/10946/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594233 A/chicken/Jiangxi/10943/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594226 A/chicken/Jiangxi/10939/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594219 A/chicken/Jiangxi/10929/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594212 A/chicken/Jiangxi/10897/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594205 A/chicken/Jiangxi/10896/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594191 A/chicken/Jiangxi/10894/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594170 A/chicken/Jiangxi/10877/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594163 A/chicken/Jiangxi/10875/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594156 A/chicken/Jiangxi/10874/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI594135 A/chicken/Jiangxi/10870/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI593605 A/chicken/Jiangxi/18527/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593591 A/chicken/Jiangxi/18526/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593569 A/chicken/Jiangxi/18523/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593531 A/chicken/Jiangxi/18502/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593505 A/chicken/Jiangxi/18491/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593485 A/chicken/Jiangxi/18486/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593446 A/chicken/Jiangxi/18470/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593422 A/chicken/Jiangxi/18466/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI593404 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI592318 A/chicken/Jiangxi/9530/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI592311 A/chicken/Jiangxi/9497/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI583924 A/chicken/Jiangxi/9558/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI583904 A/silkie chicken/Jiangxi/9476/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI583892 A/silkie chicken/Jiangxi/9469/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI557812 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 2 (PB1) 4004.7 0.000000e+00 2237/2271 (98%) EPI530486 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI594324 A/chicken/Jiangxi/10961/2014 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2236/2271 (98%) EPI594198 A/chicken/Jiangxi/10895/2014 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2236/2271 (98%) EPI593519 A/chicken/Jiangxi/18500/2014 (A/H0) segment 2 (PB1) 4001.0 0.000000e+00 2235/2270 (98%) EPI583910 A/chicken/Jiangxi/9508/2014 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2236/2271 (98%) EPI858164 A/Environment/Jiangxi/14737/2014 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI601843 A/chicken/Jiangxi/31860/2013 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI601383 A/chicken/Jiangxi/1244/2014 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI601263 A/chicken/Jiangxi/1269/2014 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI601106 A/chicken/Jiangxi/1203/2014 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI601041 A/chicken/Jiangxi/36263/2013 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI599762 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI599585 A/chicken/Jiangxi/29117/2013 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI596742 A/chicken/Jiangxi/30801/2013 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI594331 A/chicken/Jiangxi/10962/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI594184 A/chicken/Jiangxi/10885/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI594177 A/chicken/Jiangxi/10882/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI593619 A/chicken/Jiangxi/19426/2014 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI593436 A/chicken/Jiangxi/18468/2014 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI593395 A/chicken/Jiangxi/18035/2014 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI592178 A/chicken/Jiangxi/9513/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI578058 A/chicken/Jiangxi/33621/2013 (A/H0) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI578042 A/chicken/Jiangxi/33552/2013 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI530462 A/Environment/Jiangxi/03365/2014 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2236/2271 (98%) EPI583938 A/chicken/Jiangxi/10573/2014 (A/H7N9) segment 2 (PB1) 3997.3 0.000000e+00 2235/2271 (98%) EPI596733 A/chicken/Jiangxi/29132/2013 (A/H0) segment 2 (PB1) 3995.4 0.000000e+00 2232/2266 (98%) EPI602469 A/chicken/Jiangxi/5195/2014 (A/H10N8) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602455 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 2 (PB1) 3993.6 0.000000e+00 2234/2270 (98%) EPI602362 A/duck/Jiangxi/36487/2013 (A/H9N2) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602323 A/chicken/Jiangxi/13213/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602309 A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602302 A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602295 A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602281 A/duck/Jiangxi/36489/2013 (A/H9N2) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602257 A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602250 A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602243 A/chicken/Jiangxi/13217/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602219 A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602205 A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI602198 A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601948 A/chicken/Jiangxi/1208/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601902 A/chicken/Jiangxi/1287/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2234/2270 (98%) EPI601863 A/chicken/Jiangxi/36227/2013 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601853 A/chicken/Jiangxi/36223/2013 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601572 A/chicken/Jiangxi/1206/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601537 A/chicken/Jiangxi/36225/2013 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601488 A/chicken/Jiangxi/36274/2013 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601477 A/chicken/Jiangxi/36256/2013 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601449 A/chicken/Jiangxi/13198/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601355 A/chicken/Jiangxi/1226/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601333 A/chicken/Jiangxi/1257/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601303 A/chicken/Jiangxi/1247/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601291 A/chicken/Jiangxi/36291/2013 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601252 A/chicken/Jiangxi/1267/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601230 A/duck/Jiangxi/36477/2013 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI601025 A/chicken/Jiangxi/1289/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI600280 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI600273 A/chicken/Jiangxi/13275/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI600259 A/chicken/Jiangxi/13256/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI600252 A/chicken/Jiangxi/13248/2014 (A/H10N6) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Align Segment-ID Name Score E-Value Identity EPI918737 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI693857 A/Shenzhen/TH003/2016(H5N6) (A/H5N6) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI530387 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 5 (NP) 2660.3 0.000000e+00 1478/1497 (98%) EPI602139 A/chicken/Jiangxi/18955/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI602087 A/chicken/Jiangxi/20471/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI602007 A/chicken/Jiangxi/23786/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601926 A/chicken/Jiangxi/23273/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601916 A/chicken/Jiangxi/23241/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601480 A/chicken/Jiangxi/36256/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601306 A/chicken/Jiangxi/1247/2014 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600104 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600097 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600090 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600083 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600076 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600069 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600062 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600055 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599817 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599729 A/chicken/Jiangxi/28113/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599707 A/chicken/Jiangxi/23274/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599692 A/chicken/Jiangxi/23252/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599531 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599524 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599517 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599510 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599496 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599489 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599461 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599447 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599426 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599419 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599404 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599397 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI589860 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI578052 A/chicken/Jiangxi/33583/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI602121 A/chicken/Jiangxi/18474/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI602068 A/chicken/Jiangxi/19967/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601876 A/chicken/Jiangxi/36242/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601531 A/chicken/Jiangxi/23772/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601357 A/chicken/Jiangxi/1226/2014 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601326 A/chicken/Jiangxi/1255/2014 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601316 A/chicken/Jiangxi/1250/2014 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI600111 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599700 A/chicken/Jiangxi/23259/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599685 A/chicken/Jiangxi/1204/2014 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599580 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599552 A/chicken/Jiangxi/25970/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599545 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599503 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599482 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599468 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599440 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599412 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599390 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599190 A/chicken/Jiangxi/19960/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599182 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI594446 A/chicken/Jinan/3925/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI557814 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI530451 A/Environment/Jiangxi/03355/2014 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI530419 A/Environment/Jiangxi/10721/2014 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI530379 A/Environment/Jiangxi/03366/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI497526 A/environment/Jiangxi/00452/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI589852 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 5 (NP) 2645.5 0.000000e+00 1474/1495 (98%) EPI691974 A/pigeon/Hubei/227/2012 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI602078 A/chicken/Jiangxi/19982/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI602060 A/chicken/Jiangxi/19912/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601934 A/chicken/Jiangxi/25941/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601559 A/chicken/Jiangxi/36247/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601523 A/chicken/Jiangxi/20420/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601232 A/duck/Jiangxi/36477/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601225 A/environment/Jiangxi/36468/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601028 A/chicken/Jiangxi/1289/2014 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599775 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599736 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599538 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599433 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI596736 A/chicken/Jiangxi/29132/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI594467 A/chicken/Jinan/4261/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI594460 A/chicken/Jinan/4225/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI584374 A/chicken/Jiangxi/S3735/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI584141 A/chicken/Jiangxi/S3581/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI530543 A/chicken/Jiangxi/102/2013(H10N8) (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI530435 A/Environment/Jiangxi/23930/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI530395 A/Environment/Jiangxi/03413/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI497515 A/environment/Jiangxi/00449/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601295 A/chicken/Jiangxi/1244/2014 (A/H0) segment 5 (NP) 2640.0 0.000000e+00 1474/1497 (98%) EPI691975 A/pigeon/Hubei/228/2012 (A/H9N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI691696 A/pigeon/Hubei/269/2012 (A/H9N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI691694 A/pigeon/Hubei/230/2012 (A/H9N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601906 A/chicken/Jiangxi/1287/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601608 A/chicken/Jiangxi/1288/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601547 A/chicken/Jiangxi/36240/2013 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601491 A/chicken/Jiangxi/36274/2013 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601376 A/chicken/Jiangxi/1243/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601337 A/chicken/Jiangxi/1257/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601256 A/chicken/Jiangxi/1267/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601215 A/chicken/Jiangxi/36293/2013 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601109 A/chicken/Jiangxi/1203/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI599750 A/chicken/Jiangxi/31856/2013 (A/H10N8) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 19, 2017 Author Report Share Posted February 19, 2017 Align Segment-ID Name Score E-Value Identity EPI918740 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI602360 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI602293 A/duck/Jiangxi/36501/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601957 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601850 A/chicken/Jiangxi/31860/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601592 A/chicken/Jiangxi/1214/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601581 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601563 A/chicken/Jiangxi/36247/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601331 A/chicken/Jiangxi/1255/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601270 A/chicken/Jiangxi/1269/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601218 A/chicken/Jiangxi/36293/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI599792 A/chicken/Jiangxi/36226/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI599767 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI599569 A/chicken/Jiangxi/29075/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI596750 A/chicken/Jiangxi/30801/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI584150 A/chicken/Jiangxi/S3612/2013 (A/H10N8) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI578064 A/chicken/Jiangxi/33621/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI578055 A/chicken/Jiangxi/33583/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI578047 A/chicken/Jiangxi/33552/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI530512 A/Environment/Jiangxi/10726/2014 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI530482 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI530464 A/Environment/Jiangxi/03470/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764649 A/chicken/Jiaxing/4640/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI764619 A/chicken/Jiaxing/4490/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI764537 A/chicken/Huzhou/4034/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI691661 A/chicken/Henan/141/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI691660 A/chicken/Henan/117/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI691659 A/chicken/Henan/114/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681003 A/pigeon/Zhejiang/2P5/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681002 A/pigeon/Zhejiang/2P4/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI663522 A/pigeon/Wuxi/0405007/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI663499 A/duck/Sunan/040802/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI663498 A/duck/Wuxi/04030204/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636948 A/Anhui/1-YK_RG39/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636941 A/Anhui/1-YK_RG38/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636934 A/Anhui/1-YK_RG37/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636918 A/Anhui/1-YK_RG35/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636911 A/Anhui/1-YK_RG34/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636881 A/Anhui/1-YK_RG30/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636874 A/Anhui/1-YK_RG29/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636867 A/Anhui/1-YK_RG28/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636860 A/Anhui/1-YK_RG27/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636853 A/Anhui/1-YK_RG26/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636844 A/Anhui/1-YK_RG25/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636837 A/Anhui/1-YK_RG24/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636830 A/Anhui/1-YK_RG23/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636823 A/Anhui/1-YK_RG22/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636816 A/Anhui/1-YK_RG21/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636809 A/Anhui/1-YK_RG20/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636798 A/Anhui/1-YK_RG19/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636791 A/Anhui/1-YK_RG18/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636784 A/Anhui/1-YK_RG17/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636777 A/Anhui/1-YK_RG16/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636770 A/Anhui/1-YK_RG15/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636763 A/Anhui/1-YK_RG14/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636756 A/Anhui/1-YK_RG13/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636749 A/Anhui/1-YK_RG12/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636742 A/Anhui/1-YK_RG10/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636734 A/Anhui/1-YK_RG09/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636726 A/Anhui/1-YK_RG08/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636719 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636712 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636705 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636698 A/Anhui/1-YK_RG04/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636691 A/Anhui/1-YK_RG03/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636684 A/Anhui/1-YK_RG02/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636677 A/Anhui/1-YK_RG01/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI628362 A/Zhejiang/3/2014 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI627603 A/Environment/Guangdong-Guangzhou/XN01070/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620203 A/Anhui/1-BALF_RG6/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620196 A/Anhui/1-JCVI1_RG3/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620189 A/Anhui/1-JCVI1_RG2/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620182 A/Anhui/1-JCVI1_RG1/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620171 A/Anhui/1-BALF_RG9/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620164 A/Anhui/1-BALF_RG8/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620157 A/Anhui/1-BALF_RG7/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620146 A/Anhui/1-BALF_RG20/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620139 A/Anhui/1-BALF_RG19/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620132 A/Anhui/1-BALF_RG18/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620125 A/Anhui/1-BALF_RG17/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620122 A/Anhui/1-BALF_RG32/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620115 A/Anhui/1-BALF_RG31/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620108 A/Anhui/1-BALF_RG29/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620101 A/Anhui/1-BALF_RG21/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620096 A/Anhui/1-BALF_RG44/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620089 A/Anhui/1-BALF_RG43/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620082 A/Anhui/1-BALF_RG42/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620075 A/Anhui/1-BALF_RG41/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620068 A/Anhui/1-BALF_RG40/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620057 A/Anhui/1-BALF_RG1/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620050 A/Anhui/1-BALF_RG45/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620043 A/Anhui/1-BALF_RG5/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620036 A/Anhui/1-BALF_RG4/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620029 A/Anhui/1-BALF_RG3/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620022 A/Anhui/1-BALF_RG2/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI619988 A/Anhui/1-BALF_RG33/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI615185 A/chicken/Wuxi/04030201G/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI615182 A/duck/Wuxi/0405006G/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI613839 A/Anhui/DEWH72-05/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI613832 A/Anhui/DEWH72-04/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 On 2/18/2017 at 11:43 PM, niman said: Align Segment-ID Name Score E-Value Identity EPI918738 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI627232 A/Fujian/23/2015 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1389/1399 (99%) EPI627384 A/Guangdong/02497/2014 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI627216 A/Fujian/25/2015 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI627024 A/Guangdong/15SF027/2015 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI627000 A/Guangdong/15SF080/2015 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI769577 A/Fujian/16/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI628807 A/Fujian/27/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI628695 A/Guangdong/15SF055/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627312 A/Fujian/8/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627296 A/Fujian/19/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627264 A/Guangdong/15SF021/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627104 A/Fujian/17/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627048 A/Guangdong/15SF081/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI580389 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI580381 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI566130 A/Fujian/09273/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI769569 A/Fujian/10/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628687 A/Guangdong/15SF054/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628655 A/Environment/Hunan/20986/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628631 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628583 A/Environment/Anhui/33248/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627256 A/Fujian/7/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627224 A/Fujian/24/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627120 A/Guangdong/15SF030/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627112 A/Guangdong/15SF043/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627096 A/Jiangsu/19758/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627040 A/Fujian/6/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627008 A/Jiangsu/19757/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI566083 A/Guizhou/03240/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI683029 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628743 A/Anhui/33224/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628663 A/Anhui/33227/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628639 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628623 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628591 A/Environment/Anhui/33240/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628575 A/Environment/Anhui/33250/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627472 A/Fujian/1/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627456 A/Fujian/3/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627304 A/Fujian/11/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627168 A/Zhejiang/4/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627088 A/Hunan/19763/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627080 A/Hunan/19762/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI692616 A/Huai'an/002/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628823 A/Zhejiang/10/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628775 A/Zhejiang/7/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627464 A/Fujian/2/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627288 A/Fujian/20/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627192 A/Guangdong/15SF020/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI729461 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI692626 A/chicken/Huai'an/003/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI683028 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI683027 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628751 A/Anhui/33225/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628727 A/Anhui/33228/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628607 A/Environment/Anhui/39280/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI593638 A/chicken/Jiangxi/19463/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI593625 A/chicken/Jiangxi/19426/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI593383 A/chicken/Jiangxi/18008/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592610 A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592594 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592579 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592570 A/chicken/Jiangxi/13540/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592534 A/chicken/Jiangxi/13526/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592526 A/chicken/Jiangxi/13525/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592517 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592510 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592486 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592462 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592283 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI592246 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI521919 A/Taiwan/2/2014 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627480 A/Fujian/17/2014 (A/H7N9) segment 6 (NA) 2490.4 0.000000e+00 1382/1399 (98%) EPI729453 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707902 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI628567 A/Anhui/40095/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627919 A/Xinjiang/73030/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627911 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627440 A/Anhui/01887/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627240 A/Fujian/21/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627160 A/Zhejiang/3/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593583 A/chicken/Jiangxi/18524/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593543 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593453 A/chicken/Jiangxi/18470/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593400 A/chicken/Jiangxi/18035/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593132 A/chicken/Jiangxi/14502/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592276 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707983 A/chicken/Shanghai/S3086/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707982 A/chicken/Shanghai/S3085/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707981 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707904 A/duck/Jiangsu/J3619/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627488 A/Fujian/19/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627352 A/Environment/Xinjiang/00347/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627344 A/Environment/Xinjiang/00344/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627280 A/Fujian/9/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593526 A/chicken/Jiangxi/18500/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593255 A/chicken/Jiangxi/15492/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593176 A/chicken/Jiangxi/14530/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593169 A/chicken/Jiangxi/14518/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI566099 A/XinjiangBintuan/99117/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98% R292K Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 (edited) WHO Chinese National Influenza Center Virology Institute 2017 sequence A/Guangdong/17SF006/2017, matches earlier fatal sequence from Guangdong CDC Edited February 20, 2017 by niman Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Isolate name: A/Guangdong/17SF006/2017 Isolate ID: EPI_ISL_249308 Passage details/history: E1 Type: A / H7N9 Lineage: Sample information Collection date: 2017-01-07 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: China Additional location information: Guangdong Patient age: 56 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: WHO Chinese National Influenza Center Sample ID given by the submitting laboratory: Authors: Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Guangdong/17SF006/2017-PB2 2280 EPI919596 PB1 A/Guangdong/17SF006/2017-PB1 2274 EPI919597 PA A/Guangdong/17SF006/2017-PA 2151 EPI919595 HA A/Guangdong/17SF006/2017-HA 1695 EPI919599 NP A/Guangdong/17SF006/2017-NP 1497 EPI919592 NA A/Guangdong/17SF006/2017-NA 1398 EPI919598 MP A/Guangdong/17SF006/2017-MP 982 EPI919594 NS A/Guangdong/17SF006/2017-NS 838 EPI919593 Submitter information Submitter: Yang, Lei Submission Date: 2017-02-20 Last modifier: Yang, Lei Last modified: 2017-02-20 Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919599 A/Guangdong/17SF006/2017 (A/H7N9) segment 4 (HA) 3131.2 0.000000e+00 1695/1695 (100%) EPI918736 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 4 (HA) 3131.2 0.000000e+00 1695/1695 (100%) EPI919607 A/Guangdong/17SF003/2016 (A/H7N9) segment 4 (HA) 3098.0 0.000000e+00 1689/1695 (99%) EPI919615 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 4 (HA) 3092.4 0.000000e+00 1688/1695 (99%) EPI919627 A/Environment/Guangdong/C162811110/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3086.9 0.000000e+00 1687/1695 (99%) EPI919623 A/Environment/Guangdong/C16283277/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3086.9 0.000000e+00 1687/1695 (99%) EPI919621 A/Environment/Guangdong/KGZ4048/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3086.9 0.000000e+00 1687/1695 (99%) EPI919619 A/Environment/Guangdong/KGZ4068/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3086.9 0.000000e+00 1687/1695 (99%) EPI919617 A/Environment/Guangdong/KGZ4075/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3086.9 0.000000e+00 1687/1695 (99%) EPI919625 A/Environment/Guangdong/C16283219/2016(H7,H9,N2,N9) (A/H0) segment 4 (HA) 3081.3 0.000000e+00 1686/1695 (99%) EPI917065 A/Taiwan/1/2017 (A/H7N9) segment 4 (HA) 3081.3 0.000000e+00 1686/1695 (99%) EPI507710 A/turkey/Italy/4828/1999 (A/H7N1) segment 4 (HA) 2350.1 0.000000e+00 1562/1703 (91%) EPI68427 A/turkey/Italy/4708/1999 (A/H7N1) segment 4 (HA) 2350.1 0.000000e+00 1562/1703 (91%) EPI63296 A/quail/Italy/396/2000 (A/H7N1) segment 4 (HA) 2346.4 0.000000e+00 1562/1704 (91%) EPI507734 A/turkey/Italy/4756/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI507718 A/turkey/Italy/4827/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI507702 A/turkey/Italy/4618/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI505580 A/chicken/Italy/4845/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107393 A/ostrich/Italy/984/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107376 A/ostrich/Italy/984/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107357 A/chicken/Italy/5093/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI107338 A/chicken/Italy/5093/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI69101 A/turkey/Italy/4617/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI69063 A/chicken/Italy/4789/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI68218 A/turkey/Italy/1084/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI63258 A/chicken/Italy/4746/1999 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI60747 A/duck/Italy/551/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI60386 A/turkey/Italy/4580/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1561/1703 (91%) EPI58714 A/ostrich/Italy/1038/2000 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12992 A/Turkey/Italy/335/00 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12990 A/Turkey/Italy/13468/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12984 A/Turkey/Italy/13467/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12982 A/Chicken/Italy/13307/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12980 A/chicken/Italy/13474/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI12884 A/turkey/Italy/12598/99 (A/H7N1) segment 4 (HA) 2344.5 0.000000e+00 1562/1704 (91%) EPI505858 A/guinea fowl/Italy/1766/2000 (A/H7N1) segment 4 (HA) 2340.8 0.000000e+00 1561/1704 (91%) EPI651420 A/chicken/Italy/445 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI505601 A/turkey/Italy/5005/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI505582 A/chicken/Italy/4911/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI505581 A/turkey/Italy/4906/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI353345 A/chicken/Italy/445/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI319892 A/Netherlands/086/03 (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1557/1698 (91%) EPI294949 A/chicken/Netherlands/03008344/03(H7N7) (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI290279 A/chicken/Netherlands/03005432/03(H7N7) (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI242904 A/chicken/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI242903 A/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI237858 A/chicken/Netherlands/03009938/03 (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI237816 A/chicken/Netherlands/03010351/03 (A/H7N7) segment 4 (HA) 2339.0 0.000000e+00 1559/1701 (91%) EPI69044 A/quail/Italy/4992/1999 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI68199 A/chicken/Italy/2335/2000 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1561/1704 (91%) EPI13148 A/chicken/Italy/445/99 (A/H7N1) segment 4 (HA) 2339.0 0.000000e+00 1560/1703 (91%) EPI505640 A/turkey/Italy/140/2000 (A/H7N1) segment 4 (HA) 2337.1 0.000000e+00 1560/1704 (91%) EPI294973 A/chicken/Netherlands/03008200/03(H7N7) (A/H7N7) segment 4 (HA) 2337.1 0.000000e+00 1558/1700 (91%) EPI294958 A/chicken/Netherlands/03008374/03(H7N7) (A/H7N7) segment 4 (HA) 2337.1 0.000000e+00 1558/1700 (91%) EPI237855 A/chicken/Netherlands/03009127/03 (A/H7N7) segment 4 (HA) 2337.1 0.000000e+00 1558/1700 (91%) EPI505851 A/chicken/Italy/1730/2000 (A/H7N1) segment 4 (HA) 2335.3 0.000000e+00 1560/1704 (91%) EPI505603 A/chicken/Italy/5074/1999 (A/H7N1) segment 4 (HA) 2335.3 0.000000e+00 1557/1699 (91%) EPI304486 A/chicken/belgium/06601/2003 (A/H7N7) segment 4 (HA) 2335.3 0.000000e+00 1557/1699 (91%) EPI507726 A/turkey/Italy/4749/1999 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI505811 A/chicken/Italy/1651/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1559/1703 (91%) EPI505781 A/chicken/Italy/933/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1558/1702 (91%) EPI505703 A/chicken/Italy/797/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI319946 A/Netherlands/295/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1556/1698 (91%) EPI304477 A/chicken/belgium/06383/2003 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI304468 A/chicken/belgium/06175/2003 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295048 A/chicken/Netherlands/03013833/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295045 A/chicken/Netherlands/03012010/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295042 A/chicken/Netherlands/03012012/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI295024 A/chicken/Netherlands/03008331/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI294976 A/chicken/Netherlands/03009080/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI294952 A/chicken/Netherlands/03008381/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI294910 A/chicken/Netherlands/03002974/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290444 A/chicken/Netherlands/03012785/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290438 A/chicken/Netherlands/03012011/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290435 A/chicken/Netherlands/03011061/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290432 A/turkey/Netherlands/03010737/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290426 A/turkey/Netherlands/03010495/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290381 A/chicken/Netherlands/03009831/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290285 A/chicken/Netherlands/03003441/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290273 A/chicken/Netherlands/03008059/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290228 A/chicken/Netherlands/03003325/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290225 A/chicken/Netherlands/03003403/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI290189 A/chicken/Netherlands/03002994/03(H7N7) (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI238415 A/Turkey/Italy/13489/99 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1560/1704 (91%) EPI237887 A/turkey/Netherlands/03010821/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237810 A/chicken/Netherlands/03013531/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237807 A/chicken/Netherlands/03013010/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237804 A/turkey/Netherlands/03012387/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237801 A/chicken/Netherlands/03012013/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237798 A/chicken/Netherlands/03011766/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237795 A/chicken/Netherlands/UN242/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237792 A/chicken/Netherlands/03011236/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237789 A/chicken/Netherlands/03012915/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237787 A/chicken/Netherlands/03009939/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237784 A/chicken/Netherlands/03007917/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI237673 A/turkey/Netherlands/03010350/03 (A/H7N7) segment 4 (HA) 2333.4 0.000000e+00 1558/1701 (91%) EPI63277 A/guinea fowl/Italy/155/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1561/1705 (91%) EPI43057 A/chicken/Italy/1285/2000 (A/H7N1) segment 4 (HA) 2333.4 0.000000e+00 1559/1703 (91%) EPI505875 A/quail/Italy/1764/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1559/1704 (91%) EPI505809 A/goose/Italy/1310/2000 (A/H7N1) segment 4 (HA) 2329.7 0.000000e+00 1559/1704 (91%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919598 A/Guangdong/17SF006/2017 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI918738 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 6 (NA) 2577.2 0.000000e+00 1397/1398 (99%) EPI919614 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 6 (NA) 2555.0 0.000000e+00 1393/1398 (99%) EPI919606 A/Guangdong/17SF003/2016 (A/H7N9) segment 6 (NA) 2555.0 0.000000e+00 1393/1398 (99%) EPI919626 A/Environment/Guangdong/C162811110/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2549.5 0.000000e+00 1392/1398 (99%) EPI919624 A/Environment/Guangdong/C16283219/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2549.5 0.000000e+00 1392/1398 (99%) EPI919622 A/Environment/Guangdong/C16283277/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2549.5 0.000000e+00 1392/1398 (99%) EPI919620 A/Environment/Guangdong/KGZ4048/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2532.9 0.000000e+00 1389/1398 (99%) EPI919616 A/Environment/Guangdong/KGZ4075/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2532.9 0.000000e+00 1389/1398 (99%) EPI919618 A/Environment/Guangdong/KGZ4068/2016(H7,H9,N2,N9) (A/H0) segment 6 (NA) 2529.2 0.000000e+00 1388/1398 (99%) EPI627232 A/Fujian/23/2015 (A/H7N9) segment 6 (NA) 2521.8 0.000000e+00 1388/1399 (99%) EPI627384 A/Guangdong/02497/2014 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627216 A/Fujian/25/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627024 A/Guangdong/15SF027/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI627000 A/Guangdong/15SF080/2015 (A/H7N9) segment 6 (NA) 2516.3 0.000000e+00 1387/1399 (99%) EPI769577 A/Fujian/16/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628807 A/Fujian/27/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI628695 A/Guangdong/15SF055/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627312 A/Fujian/8/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627296 A/Fujian/19/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627264 A/Guangdong/15SF021/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627104 A/Fujian/17/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI627048 A/Guangdong/15SF081/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI580389 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI580381 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI566130 A/Fujian/09273/2015 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1386/1399 (99%) EPI769569 A/Fujian/10/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628687 A/Guangdong/15SF054/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628655 A/Environment/Hunan/20986/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628631 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI628583 A/Environment/Anhui/33248/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627256 A/Fujian/7/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627224 A/Fujian/24/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627120 A/Guangdong/15SF030/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627112 A/Guangdong/15SF043/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627096 A/Jiangsu/19758/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627040 A/Fujian/6/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI627008 A/Jiangsu/19757/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI566083 A/Guizhou/03240/2015 (A/H7N9) segment 6 (NA) 2505.2 0.000000e+00 1385/1399 (98%) EPI683029 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628743 A/Anhui/33224/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628663 A/Anhui/33227/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628639 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628623 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628591 A/Environment/Anhui/33240/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI628575 A/Environment/Anhui/33250/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627472 A/Fujian/1/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627456 A/Fujian/3/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627304 A/Fujian/11/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627168 A/Zhejiang/4/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627088 A/Hunan/19763/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI627080 A/Hunan/19762/2015 (A/H7N9) segment 6 (NA) 2499.6 0.000000e+00 1384/1399 (98%) EPI692616 A/Huai'an/002/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628823 A/Zhejiang/10/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI628775 A/Zhejiang/7/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627464 A/Fujian/2/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627288 A/Fujian/20/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI627192 A/Guangdong/15SF020/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1383/1399 (98%) EPI729461 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI692626 A/chicken/Huai'an/003/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI683028 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI683027 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI628751 A/Anhui/33225/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI628727 A/Anhui/33228/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI628607 A/Environment/Anhui/39280/2015 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593638 A/chicken/Jiangxi/19463/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593625 A/chicken/Jiangxi/19426/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI593383 A/chicken/Jiangxi/18008/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592610 A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592594 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592579 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592570 A/chicken/Jiangxi/13540/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592534 A/chicken/Jiangxi/13526/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592526 A/chicken/Jiangxi/13525/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592517 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592510 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592486 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592462 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592283 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI592246 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI521919 A/Taiwan/2/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI627480 A/Fujian/17/2014 (A/H7N9) segment 6 (NA) 2484.9 0.000000e+00 1381/1399 (98%) EPI729453 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707902 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI628567 A/Anhui/40095/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627919 A/Xinjiang/73030/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627911 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627440 A/Anhui/01887/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627240 A/Fujian/21/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627160 A/Zhejiang/3/2015 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593583 A/chicken/Jiangxi/18524/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593543 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593453 A/chicken/Jiangxi/18470/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593400 A/chicken/Jiangxi/18035/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI593132 A/chicken/Jiangxi/14502/2014 (A/H0) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI592276 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707983 A/chicken/Shanghai/S3086/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI707982 A/chicken/Shanghai/S3085/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI707981 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) EPI707904 A/duck/Jiangsu/J3619/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1380/1399 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919594 A/Guangdong/17SF006/2017 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI918739 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI919610 A/Environment/Guangdong/C16283222/2016 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI919602 A/Guangdong/17SF003/2016 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI917068 A/Taiwan/1/2017 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI682977 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI681159 A/chicken/Zhejiang/727192/2014 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI682978 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628747 A/Anhui/33225/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627260 A/Guangdong/15SF021/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627212 A/Fujian/25/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627132 A/Zhejiang/1/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627108 A/Guangdong/15SF043/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627044 A/Guangdong/15SF081/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627012 A/Jiangsu/18828/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593614 A/chicken/Jiangxi/18527/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593576 A/chicken/Jiangxi/18523/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593551 A/chicken/Jiangxi/18515/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593513 A/chicken/Jiangxi/18491/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593479 A/chicken/Jiangxi/18483/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593472 A/chicken/Jiangxi/18482/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593430 A/chicken/Jiangxi/18466/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593408 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI566071 A/Jiangsu/06306/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI895154 A/chicken/Ganzhou/GZ50/2015 (A/H5N6) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888055 A/Anhui/60935/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888047 A/Anhui/60934/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888039 A/Anhui/60933/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888031 A/Anhui/60931/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888015 A/Anhui/60929/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888007 A/Anhui/60928/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI887959 A/Jiangsu/60450/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI887703 A/Zhejiang/7/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI846042 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI838162 A/chicken/Jiangsu/SIC42/2015 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI838159 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI833717 A/Fujian/3/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI769578 A/Fujian/16/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI769570 A/Fujian/10/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI740733 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI729782 A/chicken/Shanghai/15/2015 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI729462 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI729454 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI682985 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI681155 A/chicken/Zhejiang/3C34/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI680963 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI680962 A/chicken/Zhejiang/C71921/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628811 A/Zhejiang/11/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628555 A/Anhui/40094/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627308 A/Fujian/8/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627292 A/Fujian/19/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627252 A/Fujian/7/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627148 A/Zhejiang/34/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627140 A/Zhejiang/35/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593441 A/chicken/Jiangxi/18468/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI583126 A/chicken/Shaoxing/5186/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI566126 A/Fujian/09273/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI531804 A/Taiwan/2/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI529239 A/wild chicken/Shanghai/C1/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888023 A/Anhui/60932/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887983 A/Anhui/60927/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887887 A/Jiangsu/60461/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887879 A/Jiangsu/60462/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887863 A/Jiangsu/60465/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887799 A/Zhejiang/6/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI846034 A/chicken/Anhui/AH120/2015 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI838148 A/chicken/Shandong/SIC24/2014 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI769642 A/Fujian/22/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI769586 A/Fujian/18/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI682983 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI682982 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI681154 A/chicken/Zhejiang/3C28/2014 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI680978 A/chicken/Zhejiang/C58/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI680959 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI639590 A/chicken/Hangzhou/174/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628787 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628779 A/Shandong-Taian/01/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628675 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628667 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628603 A/Environment/Anhui/39280/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628563 A/Anhui/40095/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628547 A/Environment/Hunan/39719/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627356 A/Fujian/5/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627220 A/Fujian/24/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627156 A/Zhejiang/3/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627100 A/Fujian/17/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI621117 A/chicken/Quzhou/2/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI602002 A/black chicken/Jiangxi/10139/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI601992 A/black chicken/Jiangxi/10136/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI601974 A/chicken/Jiangxi/10122/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI601533 A/chicken/Jiangxi/23772/2013 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI599582 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI594412 A/chicken/Rizhao/2658/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI594363 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593565 A/chicken/Jiangxi/18517/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593273 A/chicken/Jiangxi/15520/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593256 A/chicken/Jiangxi/15492/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593133 A/chicken/Jiangxi/14502/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI592006 A/silkie chicken/Shaoxing/5371/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI583857 A/chicken/Rizhao/3052/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919596 A/Guangdong/17SF006/2017 (A/H7N9) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI918730 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI578196 A/chicken/Dongguan/1674/2014 (A/H9N2) segment 1 (PB2) 4058.2 0.000000e+00 2252/2280 (98%) EPI872955 A/Hong Kong/VB16189623/2016 (A/H7N9) segment 1 (PB2) 4047.1 0.000000e+00 2251/2281 (98%) EPI837987 A/chicken/Sichuan/SIC36/2014 (A/H9N2) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI601321 A/chicken/Jiangxi/1255/2014 (A/H0) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI600087 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI600052 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI599500 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI599458 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI599423 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI593590 A/chicken/Jiangxi/18526/2014 (A/H0) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI593568 A/chicken/Jiangxi/18523/2014 (A/H0) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI593518 A/chicken/Jiangxi/18500/2014 (A/H0) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI593502 A/chicken/Jiangxi/18491/2014 (A/H0) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI593482 A/chicken/Jiangxi/18486/2014 (A/H0) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI593420 A/chicken/Jiangxi/18466/2014 (A/H0) segment 1 (PB2) 4041.6 0.000000e+00 2249/2280 (98%) EPI623615 A/chicken/Hubei/2014 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI602117 A/chicken/Jiangxi/18474/2013 (A/H0) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI602083 A/chicken/Jiangxi/20471/2013 (A/H0) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI600101 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI600073 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599528 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599493 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599472 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599465 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599444 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599416 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599408 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599394 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI599387 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI593443 A/chicken/Jiangxi/18470/2014 (A/H0) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI593394 A/chicken/Jiangxi/18035/2014 (A/H0) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI578056 A/chicken/Jiangxi/33621/2013 (A/H0) segment 1 (PB2) 4036.0 0.000000e+00 2248/2280 (98%) EPI736582 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2248/2281 (98%) EPI602064 A/chicken/Jiangxi/19967/2013 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601970 A/chicken/Jiangxi/1271/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601930 A/chicken/Jiangxi/25941/2013 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601920 A/chicken/Jiangxi/23273/2013 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601892 A/chicken/Jiangxi/1286/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601604 A/chicken/Jiangxi/1288/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601593 A/chicken/Jiangxi/1218/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601363 A/chicken/Jiangxi/1242/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601354 A/chicken/Jiangxi/1226/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601262 A/chicken/Jiangxi/1269/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI600108 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI600080 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI600066 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599814 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599747 A/chicken/Jiangxi/31856/2013 (A/H10N8) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599521 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599514 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599507 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599486 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599479 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599437 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599430 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI599401 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI593410 A/chicken/Jiangxi/18457/2014 (A/H0) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI537478 A/chicken/B15/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI537469 A/chicken/77/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4030.5 0.000000e+00 2247/2280 (98%) EPI601486 A/chicken/Jiangxi/36274/2013 (A/H0) segment 1 (PB2) 4026.8 0.000000e+00 2246/2280 (98%) EPI601332 A/chicken/Jiangxi/1257/2014 (A/H0) segment 1 (PB2) 4026.8 0.000000e+00 2246/2280 (98%) EPI683196 A/duck/Wuhan/WHYF14/2014 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI602461 A/chicken/Jiangxi/3152/2014 (A/H10N8) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI602354 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI601024 A/chicken/Jiangxi/1289/2014 (A/H0) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI600293 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI600279 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI600094 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI600059 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI599786 A/chicken/Jiangxi/36226/2013 (A/H0) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI599733 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI599577 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI599451 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI594358 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI593629 A/chicken/Jiangxi/19463/2014 (A/H0) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI593346 A/chicken/Shantou/4832/2014 (A/H7N9) segment 1 (PB2) 4025.0 0.000000e+00 2247/2281 (98%) EPI591968 A/chicken/Suzhou/4833/2013 (A/H0) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI589864 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI583824 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI557811 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI530391 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 1 (PB2) 4025.0 0.000000e+00 2246/2280 (98%) EPI601871 A/chicken/Jiangxi/36242/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2245/2280 (98%) EPI601475 A/chicken/Jiangxi/36256/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2245/2280 (98%) EPI596740 A/chicken/Jiangxi/30801/2013 (A/H0) segment 1 (PB2) 4021.3 0.000000e+00 2245/2280 (98%) EPI858163 A/Environment/Jiangxi/14737/2014 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI601911 A/chicken/Jiangxi/23241/2013 (A/H0) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI601543 A/chicken/Jiangxi/36240/2013 (A/H0) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI601301 A/chicken/Jiangxi/1247/2014 (A/H0) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI601211 A/chicken/Jiangxi/36293/2013 (A/H0) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI599570 A/chicken/Jiangxi/29086/2013 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI599373 A/duck/Jiangxi/36505/2013 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI596731 A/chicken/Jiangxi/29132/2013 (A/H0) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI593353 A/chicken/Shantou/4833/2014 (A/H7N9) segment 1 (PB2) 4019.4 0.000000e+00 2246/2281 (98%) EPI583817 A/chicken/Suzhou/4837/2013 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI583810 A/chicken/Suzhou/4822/2013 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI578065 A/chicken/Jiangxi/36277/2013 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI530485 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI530479 A/Environment/Jiangxi/03481/2013 (A/H9N2) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919597 A/Guangdong/17SF006/2017 (A/H7N9) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI918732 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 2 (PB1) 4191.2 0.000000e+00 2272/2274 (99%) EPI578211 A/chicken/Dongguan/1693/2014 (A/H0) segment 2 (PB1) 4047.1 0.000000e+00 2246/2274 (98%) EPI578197 A/chicken/Dongguan/1674/2014 (A/H9N2) segment 2 (PB1) 4047.1 0.000000e+00 2246/2274 (98%) EPI627375 A/Fujian/21/2014 (A/H7N9) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI594289 A/chicken/Jiangxi/10955/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2241/2275 (98%) EPI601498 A/chicken/Jiangxi/36278/2013 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI599787 A/chicken/Jiangxi/36226/2013 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI594352 A/chicken/Jiangxi/10965/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594345 A/chicken/Jiangxi/10964/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594317 A/chicken/Jiangxi/10959/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594310 A/chicken/Jiangxi/10958/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594296 A/chicken/Jiangxi/10956/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594282 A/chicken/Jiangxi/10954/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594268 A/chicken/Jiangxi/10950/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594247 A/chicken/Jiangxi/10946/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594233 A/chicken/Jiangxi/10943/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594226 A/chicken/Jiangxi/10939/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594219 A/chicken/Jiangxi/10929/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594212 A/chicken/Jiangxi/10897/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594205 A/chicken/Jiangxi/10896/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594191 A/chicken/Jiangxi/10894/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594170 A/chicken/Jiangxi/10877/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594163 A/chicken/Jiangxi/10875/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594156 A/chicken/Jiangxi/10874/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI594135 A/chicken/Jiangxi/10870/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI593605 A/chicken/Jiangxi/18527/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593591 A/chicken/Jiangxi/18526/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593569 A/chicken/Jiangxi/18523/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593531 A/chicken/Jiangxi/18502/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593505 A/chicken/Jiangxi/18491/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593485 A/chicken/Jiangxi/18486/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593446 A/chicken/Jiangxi/18470/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593422 A/chicken/Jiangxi/18466/2014 (A/H0) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI593404 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI592318 A/chicken/Jiangxi/9530/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI592311 A/chicken/Jiangxi/9497/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI583924 A/chicken/Jiangxi/9558/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI583904 A/silkie chicken/Jiangxi/9476/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI583892 A/silkie chicken/Jiangxi/9469/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI557812 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 2 (PB1) 4013.9 0.000000e+00 2241/2275 (98%) EPI530486 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI594324 A/chicken/Jiangxi/10961/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2240/2275 (98%) EPI594198 A/chicken/Jiangxi/10895/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2240/2275 (98%) EPI593519 A/chicken/Jiangxi/18500/2014 (A/H0) segment 2 (PB1) 4010.2 0.000000e+00 2239/2274 (98%) EPI583910 A/chicken/Jiangxi/9508/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2240/2275 (98%) EPI858164 A/Environment/Jiangxi/14737/2014 (A/H9N2) segment 2 (PB1) 4008.4 0.000000e+00 2239/2274 (98%) EPI601843 A/chicken/Jiangxi/31860/2013 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI601383 A/chicken/Jiangxi/1244/2014 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI601263 A/chicken/Jiangxi/1269/2014 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI601106 A/chicken/Jiangxi/1203/2014 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI601041 A/chicken/Jiangxi/36263/2013 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI599762 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI599585 A/chicken/Jiangxi/29117/2013 (A/H9N2) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI596742 A/chicken/Jiangxi/30801/2013 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI594331 A/chicken/Jiangxi/10962/2014 (A/H7N9) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI594184 A/chicken/Jiangxi/10885/2014 (A/H7N9) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI594177 A/chicken/Jiangxi/10882/2014 (A/H7N9) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI593619 A/chicken/Jiangxi/19426/2014 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2239/2274 (98%) EPI593436 A/chicken/Jiangxi/18468/2014 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2239/2274 (98%) EPI593395 A/chicken/Jiangxi/18035/2014 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2239/2274 (98%) EPI592178 A/chicken/Jiangxi/9513/2014 (A/H7N9) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI578058 A/chicken/Jiangxi/33621/2013 (A/H0) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI578042 A/chicken/Jiangxi/33552/2013 (A/H9N2) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI530462 A/Environment/Jiangxi/03365/2014 (A/H9N2) segment 2 (PB1) 4008.4 0.000000e+00 2240/2275 (98%) EPI583938 A/chicken/Jiangxi/10573/2014 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2275 (98%) EPI596733 A/chicken/Jiangxi/29132/2013 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2236/2270 (98%) EPI602469 A/chicken/Jiangxi/5195/2014 (A/H10N8) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602455 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI602362 A/duck/Jiangxi/36487/2013 (A/H9N2) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602323 A/chicken/Jiangxi/13213/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602309 A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602302 A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602295 A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602281 A/duck/Jiangxi/36489/2013 (A/H9N2) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602257 A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602250 A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602243 A/chicken/Jiangxi/13217/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602219 A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602205 A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI602198 A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601948 A/chicken/Jiangxi/1208/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601902 A/chicken/Jiangxi/1287/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI601572 A/chicken/Jiangxi/1206/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601488 A/chicken/Jiangxi/36274/2013 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601477 A/chicken/Jiangxi/36256/2013 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601449 A/chicken/Jiangxi/13198/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601355 A/chicken/Jiangxi/1226/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601333 A/chicken/Jiangxi/1257/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601303 A/chicken/Jiangxi/1247/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601291 A/chicken/Jiangxi/36291/2013 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601252 A/chicken/Jiangxi/1267/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601230 A/duck/Jiangxi/36477/2013 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI601025 A/chicken/Jiangxi/1289/2014 (A/H0) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI600280 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI600273 A/chicken/Jiangxi/13275/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI600259 A/chicken/Jiangxi/13256/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI600252 A/chicken/Jiangxi/13248/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI600238 A/chicken/Jiangxi/13222/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) EPI600231 A/chicken/Jiangxi/13218/2014 (A/H10N6) segment 2 (PB1) 4002.8 0.000000e+00 2239/2275 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919595 A/Guangdong/17SF006/2017 (A/H7N9) segment 3 (PA) 3969.6 0.000000e+00 2151/2151 (100%) EPI918734 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 3 (PA) 3969.6 0.000000e+00 2150/2151 (99%) EPI627061 A/Guangdong/15SF053/2015 (A/H7N9) segment 3 (PA) 3853.2 0.000000e+00 2129/2151 (98%) EPI627429 A/Anhui/01883/2014 (A/H7N9) segment 3 (PA) 3842.2 0.000000e+00 2127/2151 (98%) EPI627421 A/Anhui/01882/2014 (A/H7N9) segment 3 (PA) 3842.2 0.000000e+00 2127/2151 (98%) EPI577892 A/chicken/Jiangxi/33621/2013 (A/H0) segment 3 (PA) 3825.5 0.000000e+00 2124/2151 (98%) EPI652793 A/chicken/Qingdao/013/2014 (A/H9N2) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI599105 A/chicken/Jiangxi/1289/2014 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI599104 A/chicken/Jiangxi/1203/2014 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI599059 A/chicken/Jiangxi/36286/2013 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI599050 A/chicken/Jiangxi/1243/2014 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI598800 A/chicken/Jiangxi/36278/2013 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI598799 A/chicken/Jiangxi/36274/2013 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI598777 A/chicken/Jiangxi/1206/2014 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI584255 A/chicken/Jiangxi/S3581/2013 (A/H10N8) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI577891 A/chicken/Jiangxi/33583/2013 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI577341 A/chicken/Jiangxi/30801/2013 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI568433 A/chicken/Jiangxi/29086/2013 (A/H9N2) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI568409 A/chicken/Jiangxi/1271/2014 (A/H0) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI530490 A/Environment/Jiangxi/10618/2014 (A/H9N2) segment 3 (PA) 3820.0 0.000000e+00 2123/2151 (98%) EPI599063 A/duck/Jiangxi/36477/2013 (A/H0) segment 3 (PA) 3818.1 0.000000e+00 2122/2151 (98%) EPI599060 A/chicken/Jiangxi/36291/2013 (A/H0) segment 3 (PA) 3816.3 0.000000e+00 2122/2151 (98%) EPI599276 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI599057 A/chicken/Jiangxi/1269/2014 (A/H0) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI599055 A/chicken/Jiangxi/1257/2014 (A/H0) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI599049 A/chicken/Jiangxi/1242/2014 (A/H0) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI598798 A/chicken/Jiangxi/36256/2013 (A/H0) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI598790 A/chicken/Jiangxi/1288/2014 (A/H0) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI598697 A/chicken/Jiangxi/36242/2013 (A/H0) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI598620 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI598340 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI577889 A/chicken/Jiangxi/10278/2013 (A/H9N2) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI577183 A/chicken/Suzhou/4960/2013 (A/H9N2) segment 3 (PA) 3814.5 0.000000e+00 2122/2151 (98%) EPI598789 A/chicken/Jiangxi/1218/2014 (A/H0) segment 3 (PA) 3810.8 0.000000e+00 2121/2151 (98%) EPI652797 A/chicken/Qingdao/017/2014 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI599274 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI599268 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI599266 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI599225 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI599220 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI599107 A/chicken/Jiangxi/36263/2013 (A/H0) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI598714 A/chicken/Jiangxi/36266/2013 (A/H0) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI598458 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI598452 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI598441 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI598347 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI598343 A/chicken/Jiangxi/36226/2013 (A/H0) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI598339 A/chicken/Jiangxi/31872/2013 (A/H9N2) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI568385 A/chicken/Jiangxi/19912/2013 (A/H0) segment 3 (PA) 3808.9 0.000000e+00 2121/2151 (98%) EPI599054 A/chicken/Jiangxi/1255/2014 (A/H0) segment 3 (PA) 3807.1 0.000000e+00 2120/2151 (98%) EPI628404 A/environment/Jiangsu/03174/2013 (A/H7N9) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI628020 A/Environment/Jiangsu/09386/2013 (A/H7N9) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI599278 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI599272 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI599202 A/chicken/Jiangxi/19960/2013 (A/H10N8) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI599196 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI599058 A/chicken/Jiangxi/3119/2014 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598794 A/chicken/Jiangxi/36225/2013 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598696 A/chicken/Jiangxi/36227/2013 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598695 A/chicken/Jiangxi/36223/2013 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598694 A/chicken/Jiangxi/31860/2013 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598659 A/chicken/Jiangxi/18474/2013 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598645 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598531 A/chicken/Jiangxi/36229/2013 (A/H10N8) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI598466 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI568453 A/chicken/Jiangxi/23241/2013 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI568443 A/chicken/Jiangxi/23252/2013 (A/H10N8) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI568408 A/chicken/Jiangxi/1209/2014 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2119/2151 (98%) EPI568383 A/chicken/Jiangxi/18926/2013 (A/H0) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI530484 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 3 (PA) 3803.4 0.000000e+00 2120/2151 (98%) EPI599271 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 3 (PA) 3799.7 0.000000e+00 2119/2151 (98%) EPI530472 A/Environment/Jiangxi/03476/2013 (A/H9N2) segment 3 (PA) 3799.7 0.000000e+00 2119/2151 (98%) EPI599275 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599273 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599270 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599269 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599267 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599226 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599224 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599223 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599193 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599056 A/chicken/Jiangxi/1267/2014 (A/H0) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI599052 A/chicken/Jiangxi/1247/2014 (A/H0) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI598795 A/chicken/Jiangxi/36240/2013 (A/H0) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI598791 A/chicken/Jiangxi/20420/2013 (A/H0) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI598622 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI598442 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI598440 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI577184 A/chicken/Suzhou/4965/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2120/2152 (98%) EPI568448 A/chicken/Jiangxi/28113/2013 (A/H10N8) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI568445 A/chicken/Jiangxi/23274/2013 (A/H10N8) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI568434 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI568401 A/chicken/Jiangxi/23786/2013 (A/H0) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI568386 A/chicken/Jiangxi/19967/2013 (A/H0) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI557733 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI530466 A/Environment/Jiangxi/03470/2013 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI530454 A/Environment/Jiangxi/03355/2014 (A/H9N2) segment 3 (PA) 3797.8 0.000000e+00 2119/2151 (98%) EPI838045 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 3 (PA) 3792.3 0.000000e+00 2118/2151 (98%) EPI656406 A/GD-53/2015/H7N9/2015-02-03 (A/H7N9) segment 3 (PA) 3792.3 0.000000e+00 2094/2115 (99%) EPI599277 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 3 (PA) 3792.3 0.000000e+00 2118/2151 (98%) 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niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919592 A/Guangdong/17SF006/2017 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI918737 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI693857 A/Shenzhen/TH003/2016(H5N6) (A/H5N6) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI530387 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 5 (NP) 2660.3 0.000000e+00 1478/1497 (98%) EPI602139 A/chicken/Jiangxi/18955/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI602087 A/chicken/Jiangxi/20471/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI602007 A/chicken/Jiangxi/23786/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601926 A/chicken/Jiangxi/23273/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601916 A/chicken/Jiangxi/23241/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601480 A/chicken/Jiangxi/36256/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI601306 A/chicken/Jiangxi/1247/2014 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600104 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600097 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600090 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600083 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600076 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600069 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600062 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI600055 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599817 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599729 A/chicken/Jiangxi/28113/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599707 A/chicken/Jiangxi/23274/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599692 A/chicken/Jiangxi/23252/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599531 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599524 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599517 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599510 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599496 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599489 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599461 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599447 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599426 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599419 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599404 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI599397 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI589860 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI578052 A/chicken/Jiangxi/33583/2013 (A/H0) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI602121 A/chicken/Jiangxi/18474/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI602068 A/chicken/Jiangxi/19967/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601876 A/chicken/Jiangxi/36242/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601531 A/chicken/Jiangxi/23772/2013 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601357 A/chicken/Jiangxi/1226/2014 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601326 A/chicken/Jiangxi/1255/2014 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI601316 A/chicken/Jiangxi/1250/2014 (A/H0) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI600111 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599700 A/chicken/Jiangxi/23259/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599685 A/chicken/Jiangxi/1204/2014 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599580 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599552 A/chicken/Jiangxi/25970/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599545 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599503 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599482 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599468 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599440 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599412 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599390 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599190 A/chicken/Jiangxi/19960/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI599182 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI594446 A/chicken/Jinan/3925/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI557814 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI530451 A/Environment/Jiangxi/03355/2014 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI530419 A/Environment/Jiangxi/10721/2014 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI530379 A/Environment/Jiangxi/03366/2013 (A/H10N8) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI497526 A/environment/Jiangxi/00452/2013 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%) EPI589852 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 5 (NP) 2645.5 0.000000e+00 1474/1495 (98%) EPI691974 A/pigeon/Hubei/227/2012 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI602078 A/chicken/Jiangxi/19982/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI602060 A/chicken/Jiangxi/19912/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601934 A/chicken/Jiangxi/25941/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601559 A/chicken/Jiangxi/36247/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601523 A/chicken/Jiangxi/20420/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601232 A/duck/Jiangxi/36477/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601225 A/environment/Jiangxi/36468/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601028 A/chicken/Jiangxi/1289/2014 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599775 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599736 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599538 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI599433 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI596736 A/chicken/Jiangxi/29132/2013 (A/H0) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI594467 A/chicken/Jinan/4261/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI594460 A/chicken/Jinan/4225/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI584374 A/chicken/Jiangxi/S3735/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI584141 A/chicken/Jiangxi/S3581/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI530543 A/chicken/Jiangxi/102/2013(H10N8) (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI530435 A/Environment/Jiangxi/23930/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI530395 A/Environment/Jiangxi/03413/2013 (A/H10N8) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI497515 A/environment/Jiangxi/00449/2013 (A/H9N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%) EPI601295 A/chicken/Jiangxi/1244/2014 (A/H0) segment 5 (NP) 2640.0 0.000000e+00 1474/1497 (98%) EPI691975 A/pigeon/Hubei/228/2012 (A/H9N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI691696 A/pigeon/Hubei/269/2012 (A/H9N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI691694 A/pigeon/Hubei/230/2012 (A/H9N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601906 A/chicken/Jiangxi/1287/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601608 A/chicken/Jiangxi/1288/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601547 A/chicken/Jiangxi/36240/2013 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601491 A/chicken/Jiangxi/36274/2013 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601376 A/chicken/Jiangxi/1243/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601337 A/chicken/Jiangxi/1257/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601256 A/chicken/Jiangxi/1267/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601215 A/chicken/Jiangxi/36293/2013 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI601109 A/chicken/Jiangxi/1203/2014 (A/H0) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 20, 2017 Author Report Share Posted February 20, 2017 Align Segment-ID Name Score E-Value Identity EPI919593 A/Guangdong/17SF006/2017 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI918740 A/Qingyuan/GIRD1/2017 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI602360 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI602293 A/duck/Jiangxi/36501/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601957 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601850 A/chicken/Jiangxi/31860/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601592 A/chicken/Jiangxi/1214/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601581 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601563 A/chicken/Jiangxi/36247/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601331 A/chicken/Jiangxi/1255/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601270 A/chicken/Jiangxi/1269/2014 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI601218 A/chicken/Jiangxi/36293/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI599792 A/chicken/Jiangxi/36226/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI599767 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI599569 A/chicken/Jiangxi/29075/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI596750 A/chicken/Jiangxi/30801/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI584150 A/chicken/Jiangxi/S3612/2013 (A/H10N8) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI578064 A/chicken/Jiangxi/33621/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI578055 A/chicken/Jiangxi/33583/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI578047 A/chicken/Jiangxi/33552/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI530512 A/Environment/Jiangxi/10726/2014 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI530482 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI530464 A/Environment/Jiangxi/03470/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764649 A/chicken/Jiaxing/4640/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI764619 A/chicken/Jiaxing/4490/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI764537 A/chicken/Huzhou/4034/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI691661 A/chicken/Henan/141/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI691660 A/chicken/Henan/117/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI691659 A/chicken/Henan/114/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681003 A/pigeon/Zhejiang/2P5/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681002 A/pigeon/Zhejiang/2P4/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI663522 A/pigeon/Wuxi/0405007/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI663499 A/duck/Sunan/040802/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI663498 A/duck/Wuxi/04030204/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636948 A/Anhui/1-YK_RG39/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636941 A/Anhui/1-YK_RG38/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636934 A/Anhui/1-YK_RG37/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636918 A/Anhui/1-YK_RG35/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636911 A/Anhui/1-YK_RG34/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636881 A/Anhui/1-YK_RG30/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636874 A/Anhui/1-YK_RG29/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636867 A/Anhui/1-YK_RG28/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636860 A/Anhui/1-YK_RG27/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636853 A/Anhui/1-YK_RG26/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636844 A/Anhui/1-YK_RG25/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636837 A/Anhui/1-YK_RG24/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636830 A/Anhui/1-YK_RG23/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636823 A/Anhui/1-YK_RG22/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636816 A/Anhui/1-YK_RG21/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636809 A/Anhui/1-YK_RG20/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636798 A/Anhui/1-YK_RG19/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636791 A/Anhui/1-YK_RG18/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636784 A/Anhui/1-YK_RG17/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636777 A/Anhui/1-YK_RG16/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636770 A/Anhui/1-YK_RG15/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636763 A/Anhui/1-YK_RG14/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636756 A/Anhui/1-YK_RG13/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636749 A/Anhui/1-YK_RG12/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636742 A/Anhui/1-YK_RG10/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636734 A/Anhui/1-YK_RG09/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636726 A/Anhui/1-YK_RG08/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636719 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636712 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636705 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636698 A/Anhui/1-YK_RG04/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636691 A/Anhui/1-YK_RG03/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636684 A/Anhui/1-YK_RG02/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI636677 A/Anhui/1-YK_RG01/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI628362 A/Zhejiang/3/2014 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI627603 A/Environment/Guangdong-Guangzhou/XN01070/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620203 A/Anhui/1-BALF_RG6/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620196 A/Anhui/1-JCVI1_RG3/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620189 A/Anhui/1-JCVI1_RG2/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620182 A/Anhui/1-JCVI1_RG1/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620171 A/Anhui/1-BALF_RG9/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620164 A/Anhui/1-BALF_RG8/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620157 A/Anhui/1-BALF_RG7/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620146 A/Anhui/1-BALF_RG20/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620139 A/Anhui/1-BALF_RG19/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620132 A/Anhui/1-BALF_RG18/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620125 A/Anhui/1-BALF_RG17/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620122 A/Anhui/1-BALF_RG32/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620115 A/Anhui/1-BALF_RG31/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620108 A/Anhui/1-BALF_RG29/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620101 A/Anhui/1-BALF_RG21/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620096 A/Anhui/1-BALF_RG44/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620089 A/Anhui/1-BALF_RG43/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620082 A/Anhui/1-BALF_RG42/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620075 A/Anhui/1-BALF_RG41/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620068 A/Anhui/1-BALF_RG40/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620057 A/Anhui/1-BALF_RG1/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620050 A/Anhui/1-BALF_RG45/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620043 A/Anhui/1-BALF_RG5/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620036 A/Anhui/1-BALF_RG4/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620029 A/Anhui/1-BALF_RG3/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI620022 A/Anhui/1-BALF_RG2/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI619988 A/Anhui/1-BALF_RG33/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI615185 A/chicken/Wuxi/04030201G/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI615182 A/duck/Wuxi/0405006G/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI613839 A/Anhui/DEWH72-05/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) Link to comment Share on other sites More sharing options...
niman Posted February 27, 2017 Author Report Share Posted February 27, 2017 Isolate name: A/Guangdong/17SF006/2017 Isolate ID: EPI_ISL_249308 Passage details/history: E1 Type: A / H7N9 Lineage: Sample information Collection date: 2017-01-12 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: China Additional location information: Guangdong Patient age: 57 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: WHO Chinese National Influenza Center Sample ID given by the submitting laboratory: Authors: Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Guangdong/17SF006/2017-PB2 2280 EPI919596 PB1 A/Guangdong/17SF006/2017-PB1 2274 EPI919597 PA A/Guangdong/17SF006/2017-PA 2151 EPI919595 HA A/Guangdong/17SF006/2017-HA 1695 EPI919599 NP A/Guangdong/17SF006/2017-NP 1497 EPI919592 NA A/Guangdong/17SF006/2017-NA 1398 EPI919598 MP A/Guangdong/17SF006/2017-MP 982 EPI919594 NS A/Guangdong/17SF006/2017-NS 838 EPI919593 Submitter information Submitter: Yang, Lei Submission Date: 2017-02-20 Last modifier: Yang, Lei Last modified: 2017-02-21 Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Link to comment Share on other sites More sharing options...
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