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Pandemic Potentials Blog

Sequences (COVID)

  1. First XDD Sequence from King Washington

    Started by niman,

    USA/WA-GBW-H10-018-0210/2023 King Sea-Tac - pool 11/21/23 collection Spike ins16MPLF, V483del NSP1 K47R C2334T (NSP2) G5720A (NSP3) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 102 views
    niman

  2. Second XDD Sequence from Vastra Gotaland Sweden

    Started by niman,

    Sweden/O-14_SE300_DC23-006444/2023 Vastra Gotaland 11/24/23 collection Spike ins16MPLF, V483del NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 131 views
    niman

  3. First XDD Sequence from Vastra Gotaland Sweden

    Started by niman,

    Sweden/O-14_SE300_DC23-006270/2023 Vastra Gotaland 11/17/23 collection Spike ins16MPLF, V483del NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 160 views
    niman

  4. First XDD Sequence from Villanueva De La Serena Spain

    Started by niman,

    Spain/EX-BA_18601650/2023 Villanueva De La Serena 11/11/23 collection Spike ins16MPLF, V483del NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 143 views
    niman

  5. Second XDD Sequence from Isere France

    Started by niman,

    France/ARA-CHUGA-3113159794/2023 Isere Spike V483del 11/24/23 collection NSP1 K47R G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 130 views
    niman

  6. First XDD Sequence from Isere France

    Started by niman,

    France/ARA-CHUGA-3113149048/2023 Isere Spike V483del 11/22/23 collection NSP1 K47R G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 109 views
    niman

  7. First XDD Sequence from Burgenland Austria

    Started by niman,

    Austria/AGES-1142719/2023 Burgenland Spike ins16MPLF, V483del 11/20/23 collection C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 151 views
    niman

  8. First XDD Sequence from Nantes France

    Started by niman,

    France/PDL-IPP27538/2023 Nantes 11/11/23 collection Spike ins16MPLF, V483del NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 159 views
    niman

  9. First XDD Sequence from Pannes France

    Started by niman,

    France/GES-IPP27612/2023 Pannes 11/13/23 collection Spike ins16MPLF, V483del NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 135 views
    niman

  10. Thirtieth JN.1 Sequence from New York USA

    Started by niman,

    USA/NY-CDC-QDX87155637/2023 New York 11/1/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L

    • 1 reply
    • 155 views
    niman

  11. Fourth JN.1 Sequence from Colorado USA

    Started by niman,

    USA/CO-CDC-QDX87155540/2023 Colorado 11/1/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP1 T170I T18453C (NSP14) NS8 S103L

    • 1 reply
    • 109 views
    niman

  12. First JN.1 Sequence from Arkansas USA

    Started by niman,

    USA/AR-CDC-QDX87234450/2023 Arkansas 11/1/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 94 views
    niman

  13. Sixteenth JN.1 Sequence from New Jersey USA

    Started by niman,

    USA/NJ-CDC-QDX87155520/2023 New Jersey 11/1/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L

    • 1 reply
    • 106 views
    niman

  14. Third JN.1 Sequence from Florida USA

    Started by niman,

    USA/FL-CDC-QDX87155610/2023 Florida 10/31/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L C9142T (NSP4)

    • 1 reply
    • 116 views
    niman

  15. Fifth JN.1 Sequence from Clark Nevada

    Started by niman,

    USA/NV-SNPHL-785640/2023 Clark 11/7/23 collection Spike V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 91 views
    niman

  16. Twelfth JN.1 Sequence from Essex New Jersey

    Started by niman,

    USA/NJ-GBW-H20-338-4702/2023 Essex Newark International Airport ex-Portugal 10/30/23 collection Spike ins16MPLF, V483del NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 115 views
    niman

  17. First XDD Sequence from Sant Adria Del Besos Spain

    Started by niman,

    Spain/CT-HUGTiP-A2R164/2023 Sant Adria Del Besos Spike ins16MPLF, V483del 11/21/23 collection NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 158 views
    niman

  18. First XDD Sequence from Medina Ohio

    Started by niman,

    USA/OH-ODH-SC3033325/2023 Medina Cleveland Clinic Spike ins16MPLF, V483del 11/7/23 collection NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 140 views
    niman

  19. First XDD Sequence from Marseille France

    Started by niman,

    France/PAC-HCL023170882201/2023 Marseille Spike ins16MPLF, V483del 10/23/23 collection NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 194 views
    niman

  20. First XDD Sequence from Charente France

    Started by niman,

    France/NAQ-HCL723001503301/2023 Charente Spike ins16MPLF, V483del 11/6/23 collection NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 104 views
    niman

  21. First XDD Sequence from England

    Started by niman,

    England/CLIMB-CM7YK5PI/2023 England 11/15/23 collection NSP1 K47R C2334T (NSP2) G5720A (NSP3) C6541T (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S E T11A A27507C (NS7a) NS8 G8stop G27915T (NS8) T28297C (N) C29625T (NS10) XDD

    • 1 reply
    • 138 views
    niman

  22. Ninth JN.1 Sequence from Singapore

    Started by niman,

    Singapore/R86MR100/2023 Singapore ex-New Zealand 11/22/23 collection Spike ins16MPLF NSP3 K1155R T3565C (NSP3) C18894T (NSP14) Spike L455S NS7b F19L JN.1 Spike F456L

    • 1 reply
    • 124 views
    niman

  23. First BA.2.86 Recombinant Sequence from Vigo Spain

    Started by niman,

    Spain/GA-CHUVI-22273769/2023 Vigo Complexo Hospitalario Universitario de Vigo 10/5/23 collection NSP3 K1155R T3565C (NSP3) BA.2.86.1 Spike L452R Spike L455F Spike F456L

    • 1 reply
    • 162 views
    niman

  24. Sixth JN.1 Sequence from Washington USA

    Started by niman,

    USA/WA-GBW-H20-342-2432/2023 King Sea-Tac International Airport ex-UAE 11/11/23 collection NSP3 K1155R T3565C (NSP3) NSP6 R252K C11747T (NSP6) C18894T (NSP14) Spike L455S NS7b F19L JN.1 NSP2 F319L C9142T (NSP4)

    • 1 reply
    • 153 views
    niman

  25. Eleventh JN.1 Sequence from Essex New Jersey

    Started by niman,

    USA/NJ-GBW-H20-338-4755/2023 Essex Newark International Airport ex-France 11/9/23 collection NSP3 K1155R T3565C (NSP3) NSP6 R252K C18894T (NSP14) Spike L455S NS7b F19L JN.1

    • 1 reply
    • 108 views
    niman

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