Everything posted by niman
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N23-8988/2021 1/21 51 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N41-9002/2021 1/25 76 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N1O-8985/2021 1/21 17 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N1E-8983/2021 1/20 7 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N3W-9001/2021 1/25 22 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N3H-8998/2021 1/23 28 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N2S-8993/2021 1/22 28 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N1Y-8987/2021 1/20 30 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.447679191608835%2C-96.26087694287895&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N2D-8990/2021 1/20 14 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=28.894338943386078%2C-99.3659595194552&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9N2I-8991/2021 1/20 32 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=28.894338943386078%2C-99.3659595194552&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9MNS-8885/2021 1/18 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=28.894338943386078%2C-99.3659595194552&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-9NPP-9158/2021 1/7 49F Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=28.894338943386078%2C-99.3659595194552&z=8
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
45 cases of the U.K. variant had been identified in Texas as of Feb. 12. Region 2/3 (includes Dallas-Fort Worth) – 9 cases Region 6/5S (includes Houston) – 20 cases Region 7 (includes Temple) – 11 cases Region 8 (includes San Antonio) – 4 cases Region 11 (includes Laredo) – 1 case (Source: Texas Department of State Health Services) https://www.dallasnews.com/news/2021/02/13/cases-of-more-contagious-uk-variant-are-seeing-rapid-growth-in-texas/
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25 UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
CDC has released (at GISAID) 25 UK variant (B.1.1.7) sequences collected Jan 7-25 USA/TX-CDC-9NPP-9158/2021 1/7 49F Texas USA/TX-CDC-9MNS-8885/2021 1/18 Texas USA/TX-CDC-9MNX-8886/2021 1/19 Texas USA/TX-CDC-9N2I-8991/2021 1/20 32 Texas USA/TX-CDC-9N2D-8990/2021 1/20 14 Texas USA/TX-CDC-9N1Y-8987/2021 1/20 30 Texas USA/TX-CDC-9N2S-8993/2021 1/22 28 Texas USA/TX-CDC-9N3H-8998/2021 1/23 28 Texas USA/TX-CDC-9N3W-9001/2021 1/25 22 Texas USA/TX-CDC-9N1E-8983/2021 1/20 7 Texas USA/TX-CDC-9N1O-8985/2021 1/21 17 Texas USA/TX-CDC-9N41-9002/2021 1/25 76 Texas USA/TX-CDC-9N23-8988/2021 1/21 51 Texas USA/TX-CDC-9N37-8996/2021 1/23 32 Texas USA/TX-CDC-9N3R-9000/2021 1/25 6 Texas USA/TX-CDC-9N2X-8994/2021 1/23 24 Texas USA/TX-CDC-9N46-9003/2021 1/25 80 Texas USA/TX-CDC-9N0Z-8980/2021 1/20 3 Texas USA/TX-CDC-9N4B-9004/2021 1/25 78 Texas USA/TX-CDC-9N1T-8986/2021 1/21 32 Texas USA/TX-CDC-9N0P-8978/2021 1/20 33 Texas USA/TX-CDC-9N19-8982/2021 1/20 3 Texas USA/TX-CDC-9N1J-8984/2021 1/20 3 Texas USA/TX-CDC-9N14-8981/2021 1/20 26 Texas USA/TX-CDC-9N32-8995/2021 1/23 44 Texas
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-STM-0000025-B11/2021 1/11 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=32.01672602650041%2C-98.17351291725512&z=7
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
USA/TX-CDC-STM-000003659/2021 1/17 52M Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=32.01672602650041%2C-98.17351291725512&z=7
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Texas
CDC has released (at GISAID) two UK variant (B.1.1.7) sequences collected Jan 11-17 USA/TX-CDC-STM-000003659/2021 1/17 52M Texas USA/TX-CDC-STM-0000025-B11/2021 1/11 Texas
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UK Variant B.1.1.7 SARS CoV2 Sequence From Houston Texas
USA/TX-HHD-2102095378/2021 1/9 57 Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.1676507108371%2C-95.87737033913012&z=7
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UK Variant B.1.1.7 SARS CoV2 Sequence From Houston Texas
Houston Health Dept has released (at GISAID) a UK variant (B.1.1.7) sequences collected Jan 9 in Houston USA/TX-HHD-2102095378/2021 1/9 57 Texas
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Holland Texas
USA/TX-BSWTemple-HO68290/2021 1/16 24F Holland Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. Map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=30.851974997473494%2C-97.60037726979307&z=10
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Holland Texas
USA/TX-BSW-KU51457/2021 2/1 17F Holland Texas matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. Map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=30.851974997473494%2C-97.60037726979307&z=10
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Holland Texas
Baylor Scott & White has released (at GISAID) two UK variant (B.1.1.7) sequences collected Jan 16- Feb 1 in Holland USA/TX-BSW-KU51457/2021 2/1 17F Holland Texas USA/TX-BSWTemple-HO68290/2021 1/16 24F Holland Texas
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Norwich England With E484K
England/ARCH-000052H2/2021 2021 Norwich England matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=52.74884594667307%2C1.0602490119613206&z=9
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Norwich England With E484K
England/ARCH-000052C6/2021 2021 Norwich England matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=52.74884594667307%2C1.0602490119613206&z=9
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Two UK Variant B.1.1.7 SARS CoV2 Sequences From Norwich England With E484K
COG-UK has released (at GISAID) two UK variant (B.1.1.7) sequences collected in Norwich in 2021 England/ARCH-000052C6/2021 2021 Norwich England England/ARCH-000052H2/2021 2021 Norwich England