Jump to content
Pandemic Potentials Blog

niman

Super Administrators
 View Profile  See their activity

  • Posts

    74,774

  • Joined

  • Last visited

  • Days Won

    31

 Content Type 

Everything posted by niman

  1. niman
  2. niman
    Kentucky - Poultry slaughtered on or after February 23, 2017, which originated from or passed through or is slaughtered/processed within the zone shown on the attached map is ineligible. Within the zone, poultry slaughtered and processed before February 23 , 2017 is eligible.*
  3. niman
    Japan has now banned poultry in a restriction zone centered in Christian County, Kentucky, which extends to Todd County https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Japan
  4. niman
    Peco Foods https://www.pecofoods.com/avianflu.php
  5. niman
    Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1k-KvqZz3R_Dhe4TOrFD7aYv34Hs&ll=33.30384513352203%2C-87.8713778043213&z=14
  6. niman
  7. niman
    Poultry slaughtered on or after February 14, 2017, which originated from or passed through or is slaughtered/processed within the zones shown on the attached maps (2 pages) is ineligible. Within those zones, poultry slaughtered and processed before February 14 , 2017 is eligible.*
  8. niman
    Japan has issue a ban for a new region in Alabama. The center of the restriction zone is a farm in Pickens Co Alabama near the border with Tusaloosa. Therefore the exclusion zone covers areas in both counties. The center of the circle is on a farm owned by Peco Foods. https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Japan
  9. niman
    Poultry meat and poultry meat products from Lincoln, Franklin, and Moore Counties in Tennessee and Madison and Jackson Counties in Alabama produced on or after March 4, 2017 are not eligible to export to or transit via the European Union. Poultry meat and poultry meat products from Lincoln, Franklin, and Moore Counties in Tennessee and Madison and Jackson Counties in Alabama produced prior to March 4, 2017 are eligible.* https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/European-Union
  10. niman
    EU has banned poultry from Moore County Tennessee, suggesting further H7N9 spread.
  11. niman
    Align Segment-ID Name Score E-Value Identity EPI959439 A/mute swan/Poland/64/2017 (A/H5N5) segment 8 (NS) 1460.0 0.000000e+00 790/790 (100%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI925950 A/gadwall/Chany/97/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI888092 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 782/787 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 782/787 (99%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909368 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI869947 A/herring gull/Poland/84/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860499 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860405 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860397 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI859657 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 781/787 (99%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 781/787 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI959429 A/chicken/Poland/79A/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909432 A/turkey/Rostov/11/2017 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI881283 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI869813 A/duck/France/161108h/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 780/787 (99%) EPI952643 A/chicken/Korea/H903/2017 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 782/791 (98%) EPI942947 A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI881278 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1408.3 0.000000e+00 779/790 (98%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 780/790 (98%) EPI959420 A/domestic goose/Poland/33/2016 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI952801 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI942939 A/turkey/England/003778/2017 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI887472 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1393.5 0.000000e+00 779/791 (98%)
  12. niman
    Align Segment-ID Name Score E-Value Identity EPI959438 A/mute swan/Poland/64/2017 (A/H5N5) segment 5 (NP) 2730.5 0.000000e+00 1478/1478 (100%) EPI926005 A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 5 (NP) 2658.4 0.000000e+00 1465/1478 (99%) EPI889966 A/mallard duck/Netherlands/7/2014 (A/H6N2) segment 5 (NP) 2608.6 0.000000e+00 1456/1478 (98%) EPI617869 A/mallard/Republic of Georgia/4/2012 (A/H1N1) segment 5 (NP) 2608.6 0.000000e+00 1456/1478 (98%) EPI687188 A/chicken/Scotland/532/2016 (A/H5N1) segment 5 (NP) 2564.3 0.000000e+00 1449/1479 (97%) EPI704357 A/duck/Mongolia/200/2015 (A/H3N8) segment 5 (NP) 2558.7 0.000000e+00 1447/1478 (97%) EPI493029 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 5 (NP) 2558.7 0.000000e+00 1447/1478 (97%) EPI438282 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 5 (NP) 2553.2 0.000000e+00 1446/1478 (97%) EPI618038 A/domestic duck/Republic of Georgia/2/2010 (A/H10N7) segment 5 (NP) 2547.7 0.000000e+00 1446/1479 (97%) EPI618025 A/domestic duck/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2547.7 0.000000e+00 1446/1479 (97%) EPI683033 A/wild bird/Wuhan/WHHN58/2014 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1444/1478 (97%) EPI683032 A/wild bird/Wuhan/WHHN16/2014 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1444/1478 (97%) EPI601644 A/duck/Jiangxi/5581/2013 (A/H0) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI601635 A/duck/Jiangxi/5576/2013 (A/H0) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI461630 A/duck/Hunan/S1256/2012 (A/H3N8) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI446508 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 5 (NP) 2532.9 0.000000e+00 1442/1478 (97%) EPI407865 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 5 (NP) 2532.9 0.000000e+00 1442/1478 (97%) EPI942171 A/duck/Ganzhou/GZ5/2015 (A/H4N6) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI909468 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704373 A/duck/Mongolia/211/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704365 A/duck/Mongolia/208/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704316 A/duck/Mongolia/167/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI693707 A/duck/Mongolia/83/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI693699 A/duck/Mongolia/20/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI601705 A/duck/Jiangxi/285/2013 (A/H0) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI600185 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600179 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600173 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600167 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600159 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI591918 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI703486 A/duck/Anhui/FA258/2013 (A/H1N3) segment 5 (NP) 2529.2 0.000000e+00 1441/1477 (97%) EPI703477 A/duck/Yunan/V286/2012 (A/H1N2) segment 5 (NP) 2529.2 0.000000e+00 1441/1477 (97%) EPI704447 A/duck/Mongolia/996/2015 (A/H3N8) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI617996 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI617968 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI591924 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 5 (NP) 2525.5 0.000000e+00 1442/1479 (97%) EPI591912 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 5 (NP) 2525.5 0.000000e+00 1442/1479 (97%) EPI470398 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI925997 A/mallard/Chany/355/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI925989 A/gadwall/Chany/315/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI925981 A/mallard/Chany/313/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI889141 A/wild bird/Jiangxi/P419/2016 (A/H6N8) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI841764 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI683035 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI601836 A/duck/Jiangxi/17142/2013 (A/H0) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI601684 A/duck/Jiangxi/3961/2013 (A/H0) segment 5 (NP) 2520.0 0.000000e+00 1438/1475 (97%) EPI596424 A/duck/Vietnam/LBM439/2013 (A/H6N6) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI583947 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI703476 A/duck/Fujian/JF47/2014 (A/H1N1) segment 5 (NP) 2518.1 0.000000e+00 1439/1477 (97%) EPI683042 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI683037 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI683036 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI664214 A/duck/Jiangxi/01.14 NCJD034-P/2015(Mixed) (A/H5N6) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI599810 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 5 (NP) 2514.4 0.000000e+00 1440/1479 (97%) EPI692489 A/duck/Hubei/S2213/2012 (A/H4N2) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI618599 A/mallard/Sweden/107688/2009 (A/H10N1) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI617770 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI602410 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 5 (NP) 2508.9 0.000000e+00 1439/1479 (97%) EPI602350 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 5 (NP) 2508.9 0.000000e+00 1439/1479 (97%) EPI596635 A/duck/Quang Ninh/14/2013 (A/H3N6) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI470377 A/wild duck/Jiangxi/19831/2009 (A/H7N7) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI891012 A/turnstone/Netherlands/1/2010 (A/H3N8) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI617758 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI602448 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602441 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602403 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602396 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602389 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602382 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602375 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602368 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602343 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602336 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602329 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599873 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599866 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599859 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599852 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599845 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599838 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599831 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI590035 A/duck/Quang Ninh/220/2014 (A/H3N2) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI392508 A/pintail/Korea/1173/09 (A/H7N7) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI315101 A/mallard/PT/27972-B139/2007 (A/H9N2) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI602434 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 5 (NP) 2501.5 0.000000e+00 1437/1479 (97%) EPI891060 A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 5 (NP) 2497.8 0.000000e+00 1437/1479 (97%) EPI889265 A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI836615 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI836607 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823757 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823749 A/wild duck/Tyva/35/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823461 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI773758 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI602427 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 5 (NP) 2497.8 0.000000e+00 1437/1479 (97%) EPI470441 A/wild waterfowl/Hong Kong/MPM2121/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470440 A/wild waterfowl/Hong Kong/MPL705/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470438 A/common teal/Hong Kong/MPL634/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470436 A/common teal/Hong Kong/MPM1645/2011 (A/H7N1) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470411 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%)
  13. niman
    Align Segment-ID Name Score E-Value Identity EPI959440 A/mute swan/Poland/64/2017 (A/H5N5) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2135/2152 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2134/2152 (99%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI909467 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 3829.2 0.000000e+00 2123/2148 (98%) EPI959430 A/chicken/Poland/79A/2016 (A/H5N8) segment 3 (PA) 3825.5 0.000000e+00 2124/2151 (98%) EPI869808 A/duck/France/161108h/2016 (A/H5N8) segment 3 (PA) 3823.7 0.000000e+00 2124/2151 (98%) EPI887467 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 3 (PA) 3807.1 0.000000e+00 2121/2151 (98%) EPI959418 A/domestic goose/Poland/33/2016 (A/H5N8) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI895128 A/whooper swan/Korea/Gangjin 49_2/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895105 A/whooper swan/Korea/Gangjin 48/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895095 A/environment/Korea/W544/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895094 A/environment/Korea/W543/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895093 A/environment/Korea/W542/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895092 A/environment/Korea/W541/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3618.7 0.000000e+00 2087/2151 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3613.2 0.000000e+00 2086/2151 (96%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2087/2153 (96%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI890596 A/greater white-fronted goose/Netherlands/1/2012 (A/H1N1) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%) EPI891127 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%)
  14. niman
    Align Segment-ID Name Score E-Value Identity EPI959441 A/mute swan/Poland/64/2017 (A/H5N5) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI942215 A/duck/Hubei/ZYSYG3/2015 (A/H6N2) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704534 A/duck/Mongolia/709/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704526 A/duck/Mongolia/626/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704509 A/duck/Mongolia/499/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI942217 A/duck/Hubei/ZYSYG8/2015 (A/H6N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI942216 A/duck/Hubei/ZYSYG7/2015 (A/H6N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI704396 A/duck/Mongolia/520/2015 (A/H1N1) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI704501 A/duck/Mongolia/326/2015 (A/H10N3) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI704479 A/duck/Mongolia/245/2015 (A/H10N3) segment 2 (PB1) 3997.3 0.000000e+00 2237/2274 (98%) EPI704297 A/duck/Mongolia/141/2015 (A/H0N2) segment 2 (PB1) 3997.3 0.000000e+00 2237/2274 (98%) EPI618043 A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 2 (PB1) 3991.7 0.000000e+00 2236/2274 (98%) EPI891424 A/mallard duck/Netherlands/26/2010 (A/H4N6) segment 2 (PB1) 3986.2 0.000000e+00 2236/2275 (98%) EPI617988 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 2 (PB1) 3967.7 0.000000e+00 2231/2273 (98%) EPI617899 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 2 (PB1) 3958.5 0.000000e+00 2230/2274 (98%) EPI617760 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 2 (PB1) 3958.5 0.000000e+00 2230/2274 (98%) EPI891371 A/mallard duck/Netherlands/6/2013 (A/H3N8) segment 2 (PB1) 3953.0 0.000000e+00 2229/2274 (98%) EPI891426 A/mallard duck/Netherlands/26/2011 (A/H11N9) segment 2 (PB1) 3947.4 0.000000e+00 2228/2274 (97%) EPI618617 A/mallard/Sweden/133546/2011 (A/H10N4) segment 2 (PB1) 3947.4 0.000000e+00 2228/2274 (97%) EPI891301 A/greater white-fronted goose/Netherlands/2/2010 (A/H5N2) segment 2 (PB1) 3925.3 0.000000e+00 2224/2274 (97%) EPI514974 A/mallard/Sweden/80261/2008 (A/H4N9) segment 2 (PB1) 3914.2 0.000000e+00 2222/2274 (97%) EPI464920 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 2 (PB1) 3914.2 0.000000e+00 2218/2268 (97%) EPI623944 A/chicken/England/26352/2015 (A/H7N7) segment 2 (PB1) 3908.6 0.000000e+00 2221/2274 (97%) EPI629347 A/chicken/NL-Barneveld/15004745-006-010/2015 (A/H7N7) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI629339 A/Chicken/NL-Barneveld/15004745-001-005/2015 (A/H7N7) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI540405 A/waterfowl/Bangladesh/12301/2013 (A/H6N7) segment 2 (PB1) 3877.2 0.000000e+00 2215/2274 (97%) EPI940659 A/duck/India/11CL01/2014 (A/H6N2) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI372361 A/shoveler/Egypt/14879-NAMRU3/2006 (A/H7N1) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI560057 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 2 (PB1) 3866.2 0.000000e+00 2212/2272 (97%) EPI182047 A/common eider/Netherlands/1/2006 (A/H3N8) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI617954 A/Mediterranean gull/Republic of Georgia/1/2011 (A/H9N3) segment 2 (PB1) 3853.2 0.000000e+00 2211/2274 (97%) EPI617793 A/yellow-legged gull/Republic of Georgia/1/2012 (A/H0) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI887466 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI839726 A/chicken/France/150169a/2015 (A/H5N1) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704370 A/duck/Mongolia/211/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704362 A/duck/Mongolia/208/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704313 A/duck/Mongolia/167/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI693704 A/duck/Mongolia/83/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI693696 A/duck/Mongolia/20/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI464928 A/chicken/Italy/11VIR-7548/2011 (A/H5N2) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI959417 A/domestic goose/Poland/33/2016 (A/H5N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI617820 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 2 (PB1) 3825.5 0.000000e+00 2206/2274 (97%) EPI891412 A/mallard duck/Netherlands/30/2010 (A/H3N8) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI891408 A/mallard duck/Netherlands/67/2008 (A/H10N7) segment 2 (PB1) 3786.8 0.000000e+00 2199/2274 (96%) EPI891297 A/mallard duck/Netherlands/2/2015 (A/H7N7) segment 2 (PB1) 3786.8 0.000000e+00 2200/2275 (96%) EPI891469 A/mallard duck/Netherlands/1/2009 (A/H10N7) segment 2 (PB1) 3781.2 0.000000e+00 2198/2274 (96%) EPI345434 A/Larus argentatus/Belgium/02936cls9/2010 (A/H5N2) segment 2 (PB1) 3777.5 0.000000e+00 2193/2267 (96%) EPI891291 A/mallard duck/Netherlands/29/2009 (A/H11N9) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI464944 A/chicken/Italy/12VIR-7785-67/2012 (A/H5N2) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI464936 A/turkey/Italy/12VIR-6607-5/2012 (A/H5N2) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI618937 A/mallard/Sweden/101165/2009 (A/H8N4) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI618407 A/mallard/Sweden/101589/2009 (A/H11N9) segment 2 (PB1) 3770.1 0.000000e+00 2197/2275 (96%) EPI464952 A/turkey/Italy/12VIR-8036-2/2012 (A/H5N2) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI891326 A/greater white-fronted goose/Netherlands/4/2011 (A/H1N1) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI618651 A/mallard/Sweden/69794/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618636 A/mallard/Sweden/68529/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618622 A/mallard/Sweden/60069/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618605 A/mallard/Sweden/107688/2009 (A/H10N1) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI211183 A/mallard/Poland/16/09 (A/H7N7) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618014 A/mallard/Republic of Georgia/4/2010 (A/H1N1) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%) EPI687185 A/chicken/Scotland/532/2016 (A/H5N1) segment 2 (PB1) 3749.8 0.000000e+00 2149/2209 (97%) EPI891374 A/mallard duck/Netherlands/51/2010 (A/H1N1) segment 2 (PB1) 3748.0 0.000000e+00 2192/2274 (96%) EPI475930 A/mallard/Iceland/1007/2011 (A/H3N6) segment 2 (PB1) 3742.4 0.000000e+00 2191/2274 (96%) EPI618448 A/mallard/Sweden/101993/2009 (A/H2N9) segment 2 (PB1) 3736.9 0.000000e+00 2191/2275 (96%) EPI457917 A/duck/Guangxi/GXd-4/2011 (A/H1N2) segment 2 (PB1) 3736.9 0.000000e+00 2190/2274 (96%) EPI378008 A/mallard/Netherlands/29/2010 (A/H2N3) segment 2 (PB1) 3736.9 0.000000e+00 2191/2275 (96%) EPI891447 A/mallard duck/Netherlands/7/2011 (A/H4N6) segment 2 (PB1) 3735.0 0.000000e+00 2190/2274 (96%) EPI387542 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 2 (PB1) 3725.8 0.000000e+00 2189/2275 (96%) EPI891361 A/Eurasian wigeon/Netherlands/1/2010 (A/H5N2) segment 2 (PB1) 3720.3 0.000000e+00 2187/2274 (96%) EPI475944 A/great black-backed gull/Iceland/1110/2011 (A/H5N2) segment 2 (PB1) 3714.7 0.000000e+00 2187/2275 (96%) EPI457909 A/duck/Guangxi/GXd-1/2011 (A/H1N2) segment 2 (PB1) 3714.7 0.000000e+00 2186/2274 (96%) EPI367587 A/mallard/Czech Republic/15008-11K/2009 (A/H5N3) segment 2 (PB1) 3714.7 0.000000e+00 2187/2275 (96%) EPI485721 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3709.2 0.000000e+00 2186/2275 (96%) EPI439584 A/avian/Israel/289/2001 (A/H6N2) segment 2 (PB1) 3709.2 0.000000e+00 2185/2274 (96%) EPI236192 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3709.2 0.000000e+00 2186/2275 (96%) EPI433380 A/mallard/Czech Republic/15902-18K/2009 (A/H6N9) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI367595 A/mallard/Czech Republic/15962-1T/2010 (A/H6N9) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI284355 A/mallard/Czech Republic/15902-17K/2009 (A/H6N2) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI891346 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 2 (PB1) 3698.1 0.000000e+00 2183/2274 (95%) EPI891336 A/greater white-fronted goose/Netherlands/6/2010 (A/H6N2) segment 2 (PB1) 3698.1 0.000000e+00 2184/2275 (96%) EPI891221 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 2 (PB1) 3698.1 0.000000e+00 2183/2274 (95%) EPI439586 A/avian/Israel/320/2001 (A/H6N2) segment 2 (PB1) 3694.4 0.000000e+00 2182/2274 (95%) EPI618214 A/mallard/Sweden/1689/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI618201 A/mallard/Sweden/1645/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI617059 A/mallard/Sweden/1671/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI891316 A/greater white-fronted goose/Netherlands/1/2011 (A/H6N8) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI618139 A/mallard/Sweden/1690/2002 (A/H7N7) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI372273 A/teal/Egypt/20431-NAMRU3/2003 (A/H1N2) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI692423 A/duck/Guangxi/S1107/2010 (A/H4N6) segment 2 (PB1) 3681.5 0.000000e+00 2181/2275 (95%) EPI285821 A/avian/Egypt/920431/2006 (A/H9N2) segment 2 (PB1) 3681.5 0.000000e+00 2181/2275 (95%) EPI692454 A/duck/Guizhou/S1167/2010 (A/H4N6) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI692430 A/duck/Guangxi/S1211/2010 (A/H4N6) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI540165 A/duck/Bangladesh/1578/2009 (A/H11N3) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI540157 A/duck/Bangladesh/1595/2010 (A/H11N3) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI336987 A/duck/Zhejiang/2245/2011 (A/H5N1) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI229961 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3676.0 0.000000e+00 2181/2276 (95%) EPI173879 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI169291 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3676.0 0.000000e+00 2181/2276 (95%) EPI167837 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI891458 A/greater white-fronted goose/Netherlands/1/2007 (A/H1N1) segment 2 (PB1) 3670.4 0.000000e+00 2179/2275 (95%)
  15. niman
    Align Segment-ID Name Score E-Value Identity EPI602445 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602438 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602400 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602379 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602372 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599877 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599870 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599856 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599835 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602386 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI602326 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI602452 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602424 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602393 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602347 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602340 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602333 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599863 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599842 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599828 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602431 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 1 (PB2) 3951.1 0.000000e+00 2232/2280 (97%) EPI602407 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI704296 A/duck/Mongolia/141/2015 (A/H0N2) segment 1 (PB2) 3945.6 0.000000e+00 2242/2295 (97%) EPI599849 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI704500 A/duck/Mongolia/326/2015 (A/H10N3) segment 1 (PB2) 3940.0 0.000000e+00 2241/2295 (97%) EPI704478 A/duck/Mongolia/245/2015 (A/H10N3) segment 1 (PB2) 3940.0 0.000000e+00 2241/2295 (97%) EPI600182 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600176 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600170 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600162 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600156 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI591921 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI591915 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI591909 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 1 (PB2) 3928.9 0.000000e+00 2229/2280 (97%) EPI890976 A/mallard duck/Netherlands/2/2011 (A/H10N7) segment 1 (PB2) 3917.9 0.000000e+00 2237/2295 (97%) EPI890786 A/mallard duck/Netherlands/47/2010 (A/H10N7) segment 1 (PB2) 3912.3 0.000000e+00 2236/2295 (97%) EPI703415 A/duck/Fujian/JF47/2014 (A/H1N1) segment 1 (PB2) 3910.5 0.000000e+00 2213/2261 (97%) EPI574291 A/duck/Vietnam/LBM48/2011 (A/H3N2) segment 1 (PB2) 3906.8 0.000000e+00 2231/2289 (97%) EPI596394 A/muscovy duck/Vietnam/LBM115/2012 (A/H3N2) segment 1 (PB2) 3890.2 0.000000e+00 2232/2295 (97%) EPI401796 A/canvasback/Xianghai/428/2011 (A/H5N2) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI617989 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI463584 A/tundra swan/Shimane/3211A001/2011 (A/H5N2) segment 1 (PB2) 3868.0 0.000000e+00 2229/2296 (97%) EPI942332 A/duck/Shanghai/602/2009 (A/H10N8) segment 1 (PB2) 3856.9 0.000000e+00 2226/2295 (96%) EPI618102 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI889413 A/mallard duck/Netherlands/9/2013 (A/H6N8) segment 1 (PB2) 3840.3 0.000000e+00 2223/2295 (96%) EPI692509 A/duck/Hunan/S1166/2010 (A/H4N6) segment 1 (PB2) 3840.3 0.000000e+00 2214/2281 (97%) EPI560058 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI527564 A/common goldeneye/Mongolia/1216/2010 (A/H1N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI527545 A/tufted duck/Mongolia/1409/2010 (A/H1N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI324555 A/quail/Lebanon/273/2010 (A/H9N2) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI618117 A/black-headed gull/Republic of Georgia/1/2010 (A/H11N1) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI527563 A/common goldeneye/Mongolia/1238/2010 (A/H1N1) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI361736 A/lesser whistling-duck/Thailand/CU-W3946/2010 (A/H12N1) segment 1 (PB2) 3823.7 0.000000e+00 2202/2268 (97%) EPI461612 A/duck/Hunan/S11893/2012 (A/H4N6) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI395159 A/duck/Vietnam/LBM1/2011 (A/H4N6) segment 1 (PB2) 3812.6 0.000000e+00 2219/2296 (96%) EPI372391 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 1 (PB2) 3812.6 0.000000e+00 2210/2282 (96%) EPI617950 A/black-headed gull/Republic of Georgia/2/2011 (A/H9N1) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI775000 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 1 (PB2) 3801.5 0.000000e+00 2217/2296 (96%) EPI703416 A/duck/Yunan/V286/2012 (A/H1N2) segment 1 (PB2) 3794.1 0.000000e+00 2192/2261 (96%) EPI361726 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 1 (PB2) 3792.3 0.000000e+00 2194/2264 (96%) EPI387906 A/mallard/Korea/1041/2010 (A/H10N8) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI619253 A/mallard/Sweden/5994/2005 (A/H7N7) segment 1 (PB2) 3786.8 0.000000e+00 2215/2296 (96%) EPI619239 A/mallard/Sweden/5927/2005 (A/H0) segment 1 (PB2) 3786.8 0.000000e+00 2214/2295 (96%) EPI527553 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI508037 A/wild duck/Korea/CSM42-34/2011 (A/H7N9) segment 1 (PB2) 3784.9 0.000000e+00 2214/2296 (96%) EPI508036 A/wild duck/Korea/CSM42-1/2011 (A/H7N9) segment 1 (PB2) 3784.9 0.000000e+00 2214/2296 (96%) EPI395168 A/muscovy duck/Vietnam/LBM14/2011 (H3N2) (A/H3N2) segment 1 (PB2) 3779.4 0.000000e+00 2213/2296 (96%) EPI262712 A/aquatic bird/Korea/w347/2008 (A/H5N2) segment 1 (PB2) 3779.4 0.000000e+00 2203/2281 (96%) EPI775005 A/duck/Hebei/B1647-1/2011 (A/H3N2) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI469129 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI692469 A/duck/Henan/S4179/2009 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2200/2280 (96%) EPI618220 A/mallard/Sweden/5944/2005 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI617797 A/black-headed gull/Republic of Georgia/7/2012 (A/H2N7) segment 1 (PB2) 3757.2 0.000000e+00 2199/2281 (96%) EPI361746 A/lesser whistling-duck/Thailand/CU-W3947/2010 (A/H12N1) segment 1 (PB2) 3748.0 0.000000e+00 2170/2240 (96%) EPI617839 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372304 A/teal/Egypt/00835-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372280 A/shoveler/Egypt/00597-NAMRU3/2004 (A/H7N1) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372288 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 1 (PB2) 3740.6 0.000000e+00 2197/2282 (96%) EPI361718 A/watercock/Thailand/CU-W3699/2009 (A/H12N1) segment 1 (PB2) 3731.4 0.000000e+00 2180/2259 (96%) EPI296631 A/mallard/Sweden/95/2005 (A/H7N7) segment 1 (PB2) 3731.4 0.000000e+00 2204/2295 (96%) EPI372493 A/pied avocet/Ukraine/05848-NAMRU3/2006 (A/H10N4) segment 1 (PB2) 3729.5 0.000000e+00 2195/2282 (96%) EPI618307 A/mallard/Sweden/68621/2007 (A/H11N9) segment 1 (PB2) 3724.0 0.000000e+00 2204/2297 (95%) EPI618293 A/mallard/Sweden/69639/2007 (A/H11N9) segment 1 (PB2) 3724.0 0.000000e+00 2204/2297 (95%) EPI270059 A/aquatic bird/India/NIV-17095/2007 (A/H11N1) segment 1 (PB2) 3724.0 0.000000e+00 2194/2282 (96%) EPI959432 A/chicken/Poland/79A/2016 (A/H5N8) segment 1 (PB2) 3718.4 0.000000e+00 2201/2295 (95%) EPI959416 A/domestic goose/Poland/33/2016 (A/H5N8) segment 1 (PB2) 3718.4 0.000000e+00 2201/2295 (95%) EPI513753 A/mallard/Sweden/79978/2008 (A/H4N6) segment 1 (PB2) 3718.4 0.000000e+00 2203/2297 (95%) EPI372509 A/garganey/Ukraine/05835-NAMRU3/2006 (A/H8N4) segment 1 (PB2) 3718.4 0.000000e+00 2193/2282 (96%) EPI869806 A/duck/France/161108h/2016 (A/H5N8) segment 1 (PB2) 3712.9 0.000000e+00 2200/2295 (95%) EPI618400 A/mallard/Sweden/79984/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI618386 A/mallard/Sweden/79436/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI618372 A/mallard/Sweden/80079/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI867457 A/mute swan/Croatia/70/2016 (A/H5N8) segment 1 (PB2) 3709.2 0.000000e+00 2194/2287 (95%) EPI749574 A/Environment/Chongqing/45208/2015 (A/H5N6) segment 1 (PB2) 3707.3 0.000000e+00 2189/2280 (96%) EPI618365 A/mallard/Sweden/80253/2008 (A/H11N9) segment 1 (PB2) 3707.3 0.000000e+00 2201/2297 (95%) EPI750183 A/goose/Taiwan/01038/2015 (A/H5N3) segment 1 (PB2) 3701.8 0.000000e+00 2199/2296 (95%) EPI750103 A/chicken/Taiwan/01174/2015 (A/H5N3) segment 1 (PB2) 3701.8 0.000000e+00 2199/2296 (95%) EPI372368 A/shoveler/Egypt/13251-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3701.8 0.000000e+00 2190/2282 (95%) EPI363564 A/wild duck/Jiangxi/8462/2006 (A/H6N1) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI178535 A/Duck/Italy/62330/2006 (A/H10N7) segment 1 (PB2) 3701.8 0.000000e+00 2200/2297 (95%)
  16. niman
    Descriptions Align Segment-ID Name Score E-Value Identity EPI931201 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 7 (MP) 1391.6 0.000000e+00 753/753 (100%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI959427 A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI931199 A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI931112 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI930844 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI930839 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909463 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909455 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909367 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI881282 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI881277 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI869946 A/herring gull/Poland/84/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860498 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860404 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860396 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI859654 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI959421 A/domestic goose/Poland/33/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI942946 A/chicken/Wales/000023/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI942938 A/turkey/England/003778/2017 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI931196 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI930842 A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI919638 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI917482 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI916524 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI916387 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI888279 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP) 1367.6 0.000000e+00 748/753 (99%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1367.6 0.000000e+00 746/749 (99%) EPI916606 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI952800 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI925951 A/gadwall/Chany/97/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909469 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909447 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909439 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909431 A/turkey/Rostov/11/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI888091 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI887471 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 749/754 (99%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI952642 A/chicken/Korea/H903/2017 (A/H5N8) segment 7 (MP) 1358.4 0.000000e+00 747/753 (99%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1358.4 0.000000e+00 747/753 (99%) EPI909423 A/chicken/Voronezh/20/2017 (A/H5N8) segment 7 (MP) 1352.9 0.000000e+00 746/753 (99%)
  17. niman
    Align Segment-ID Name Score E-Value Identity EPI888601 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 6 (NA) 2555.0 0.000000e+00 1387/1389 (99%) EPI873621 A/mute swan/Croatia/102/2016 (A/H5N5) segment 6 (NA) 2544.0 0.000000e+00 1385/1389 (99%) EPI680489 A/common redshank/Singapore/F83-2/2015(H9N5) (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI680487 A/common redshank/Singapore/F83-1/2015(H9N5) (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI678380 A/common redshank/Singapore/F83-2/2015 (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI678379 A/common redshank/Singapore/F83-1/2015 (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI940483 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 6 (NA) 2405.5 0.000000e+00 1304/1305 (99%) EPI600154 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 6 (NA) 2405.5 0.000000e+00 1360/1389 (97%) EPI399897 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2327.9 0.000000e+00 1346/1389 (96%) EPI314739 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2327.9 0.000000e+00 1346/1389 (96%) EPI461090 A/duck/Guangxi/GXd-1/2009 (A/H6N5) segment 6 (NA) 2316.8 0.000000e+00 1344/1389 (96%) EPI268287 A/duck/Hunan/5613/2003 (A/H6N5) segment 6 (NA) 2255.9 0.000000e+00 1333/1389 (95%) EPI600798 A/migratory duck/Jiangxi/7231/2003 (A/H10N5) segment 6 (NA) 2244.8 0.000000e+00 1331/1389 (95%) EPI600792 A/migratory duck/Jiangxi/6847/2003 (A/H10N5) segment 6 (NA) 2228.2 0.000000e+00 1328/1389 (95%) EPI618625 A/mallard/Sweden/343/2002 (A/H12N5) segment 6 (NA) 2200.5 0.000000e+00 1323/1389 (95%) EPI377768 A/mallard/Sweden/30/2002 (A/H2N5) segment 6 (NA) 2194.9 0.000000e+00 1322/1389 (95%) EPI296546 A/Bewicks swan/Netherlands/1/2007 (A/H1N5) segment 6 (NA) 2167.2 0.000000e+00 1317/1389 (94%) EPI190186 A/mallard/Switzerland/WV4060167/2006 (A/H3N5) segment 6 (NA) 2167.2 0.000000e+00 1317/1389 (94%) EPI618665 A/mallard/Sweden/2213/2003 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI618645 A/mallard/Sweden/69794/2007 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1317/1390 (94%) EPI618630 A/mallard/Sweden/68529/2007 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1317/1390 (94%) EPI514607 A/mallard/Sweden/50709/2006 (A/H4N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI251818 A/mallard/Sweden/86/2003 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI618616 A/mallard/Sweden/60069/2007 (A/H12N5) segment 6 (NA) 2156.2 0.000000e+00 1316/1390 (94%) EPI618602 A/mallard/Sweden/50968/2006 (A/H12N5) segment 6 (NA) 2139.5 0.000000e+00 1312/1389 (94%) EPI296562 A/black-headed gull/Netherlands/1/2006 (A/H4N5) segment 6 (NA) 2139.5 0.000000e+00 1312/1389 (94%) EPI890453 A/greater white-fronted goose/Netherlands/3/2007 (A/H6N5) segment 6 (NA) 2134.0 0.000000e+00 1311/1389 (94%) EPI760593 A/wigeon/Italy/6127-23/2007 (A/H6N5) segment 6 (NA) 2134.0 0.000000e+00 1311/1389 (94%) EPI618810 A/mallard/Sweden/69773/2007 (A/H10N5) segment 6 (NA) 2134.0 0.000000e+00 1312/1390 (94%) EPI618769 A/mallard/Sweden/69792/2007 (A/H10N5) segment 6 (NA) 2134.0 0.000000e+00 1312/1390 (94%) EPI463356 A/mallard/Sweden/100127/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI463355 A/mallard/Sweden/100117/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI463353 A/mallard/Sweden/100103/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI251663 A/mallard/Netherlands/2/1999 (A/H3N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI174859 A/mallard/Denmark/77-64590-5/2005 (A/H7N5) segment 6 (NA) 2122.9 0.000000e+00 1311/1391 (94%) EPI345387 A/Arenaria interpres/Belgium/02936pcs1/2010 (A/H12N5) segment 6 (NA) 2111.8 0.000000e+00 1308/1390 (94%) EPI295953 A/duck/Yangzhou/013/2008 (A/H6N5) segment 6 (NA) 2111.8 0.000000e+00 1307/1389 (94%) EPI476025 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 6 (NA) 2106.3 0.000000e+00 1307/1390 (94%) EPI316866 A/mallard/Czech Republic/14924-1/2007 (A/H6N5) segment 6 (NA) 2106.3 0.000000e+00 1306/1389 (94%) EPI397609 A/sentinel mallard/Germany/sum156/2007 (A/H6N5) segment 6 (NA) 2100.8 0.000000e+00 1306/1390 (93%) EPI259429 A/duck/Hokkaido/111/2009 (A/H1N5) segment 6 (NA) 2100.8 0.000000e+00 1305/1389 (93%) EPI476092 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI476074 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI328876 A/duck/Eastern China/031/2009 (A/H5N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI328868 A/duck/Eastern China/008/2008 (A/H5N5) segment 6 (NA) 2095.2 0.000000e+00 1304/1389 (93%) EPI160652 A/duck/Hokkaido/24/04 (A/H10N5) segment 6 (NA) 2095.2 0.000000e+00 1306/1391 (93%) EPI160651 A/duck/Mongolia/149/03 (A/H10N5) segment 6 (NA) 2095.2 0.000000e+00 1306/1391 (93%) EPI1871 A/duck/Hokkaido/1058/01 (A/H4N5) segment 6 (NA) 2089.7 0.000000e+00 1305/1391 (93%) EPI476059 A/black-headed gull/Iceland/1298/2011 (A/H10N5) segment 6 (NA) 2084.1 0.000000e+00 1304/1391 (93%) EPI181656 A/duck/Tsukuba/255/2005 (A/H8N5) segment 6 (NA) 2078.6 0.000000e+00 1304/1392 (93%) EPI363513 A/duck/Guizhou/888/2006 (A/H6N5) segment 6 (NA) 2073.1 0.000000e+00 1302/1391 (93%) EPI534745 A/mallard/Finland/10952/2008 (A/H4N5) segment 6 (NA) 2071.2 0.000000e+00 1297/1385 (93%) EPI764880 A/duck/Bangladesh/18-C/2013 (A/H1N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI357827 A/duck/Mongolia/OIE-7457/2011 (A/H3N5) segment 6 (NA) 2067.5 0.000000e+00 1300/1390 (93%) EPI268286 A/duck/Guangxi/1455/2004 (A/H6N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI1887 A/duck/Hokkaido/66/01 (A/H12N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI102207 A/duck/Taiwan/WB459/04 (A/H6N5) segment 6 (NA) 2062.0 0.000000e+00 1300/1391 (93%) EPI299316 A/avian/Japan/8KI0040/2008 (A/H3N5) segment 6 (NA) 2056.4 0.000000e+00 1300/1392 (93%) EPI764882 A/duck/Bangladesh/33-O/2013 (A/H2N5) segment 6 (NA) 2050.9 0.000000e+00 1298/1391 (93%) EPI442027 A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 6 (NA) 2050.9 0.000000e+00 1296/1389 (93%) EPI268283 A/duck/Guangxi/585/2005 (A/H6N5) segment 6 (NA) 2050.9 0.000000e+00 1298/1391 (93%) EPI493827 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 6 (NA) 2045.4 0.000000e+00 1296/1390 (93%) EPI493819 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 6 (NA) 2045.4 0.000000e+00 1296/1390 (93%) EPI338864 A/aquatic bird/Korea/W69/2005 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1297/1391 (93%) EPI299284 A/avian/Japan/8KI0135/2008 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1298/1392 (93%) EPI181654 A/duck/Tsukuba/11/2005 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1297/1391 (93%) EPI268285 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 6 (NA) 2039.8 0.000000e+00 1297/1392 (93%) EPI181655 A/duck/Shiga/69/2006 (A/H6N5) segment 6 (NA) 2039.8 0.000000e+00 1297/1392 (93%) EPI268284 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 6 (NA) 2034.3 0.000000e+00 1296/1392 (93%) EPI268282 A/duck/Hunan/748/2005 (A/H6N5) segment 6 (NA) 2034.3 0.000000e+00 1295/1391 (93%) EPI493835 A/duck/Guangdong/wy24/2008 (A/H5N5) segment 6 (NA) 2028.7 0.000000e+00 1293/1390 (93%) EPI618588 A/mallard/Sweden/3328/2003 (A/H12N5) segment 6 (NA) 2012.1 0.000000e+00 1289/1389 (92%) EPI182107 A/mallard/Netherlands/11/2007 (A/H6N5) segment 6 (NA) 1995.5 0.000000e+00 1289/1392 (92%) EPI442003 A/goose/Shandong/k1204/2009 (A/H5N5) segment 6 (NA) 1993.7 0.000000e+00 1264/1356 (93%) EPI889488 A/mallard duck/Netherlands/13/2007 (A/H6N5) segment 6 (NA) 1990.0 0.000000e+00 1288/1392 (92%) EPI408363 A/wild duck/Korea/SH12-7/2008 (A/H10N5) segment 6 (NA) 1990.0 0.000000e+00 1287/1391 (92%) EPI221527 A/Anas plathyrhynchos/Spain/1252/2007 (A/H6N5) segment 6 (NA) 1990.0 0.000000e+00 1288/1392 (92%) EPI454768 A/ruddy turnstone/Delaware/AI03-162/2003 (A/H0) segment 6 (NA) 1984.4 0.000000e+00 1287/1392 (92%) EPI454761 A/ruddy turnstone/Delaware/AI03-165/2003 (A/H9N5) segment 6 (NA) 1984.4 0.000000e+00 1287/1392 (92%) EPI343733 A/shorebird/Delaware Bay/246/2003 (A/H9N5) segment 6 (NA) 1978.9 0.000000e+00 1286/1392 (92%) EPI574266 A/mule duck/Bulgaria/674/2010 (A/H6N5) segment 6 (NA) 1973.3 0.000000e+00 1286/1393 (92%) EPI454689 A/ruddy turnstone/Delaware/AI03-193/2003 (A/H9N5) segment 6 (NA) 1973.3 0.000000e+00 1286/1393 (92%) EPI617866 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 6 (NA) 1967.8 0.000000e+00 1287/1395 (92%) EPI315149 A/duck/Vietnam/G18/2009 (A/H12N5) segment 6 (NA) 1956.7 0.000000e+00 1283/1393 (92%) EPI534755 A/mallard/Finland/13016/2008 (A/H12N5) segment 6 (NA) 1916.1 0.000000e+00 1202/1284 (93%) EPI399888 A/duck/HuBei/03/2010 (A/H5N5) segment 6 (NA) 1895.8 0.000000e+00 1271/1392 (91%) EPI395082 A/swine/Hubei/10/2008 (A/H10N5) segment 6 (NA) 1895.8 0.000000e+00 1270/1391 (91%) EPI816852 A/chinstrap penguin/Antarctica/B04/2015 (A/H5N5) segment 6 (NA) 1890.2 0.000000e+00 1270/1392 (91%) EPI774536 A/Chinstrap penguin/Antarctica/15459/2015 (A/H5N5) segment 6 (NA) 1884.7 0.000000e+00 1269/1392 (91%) EPI316499 A/chicken/Hubei/119/1983 (A/H10N5) segment 6 (NA) 1884.7 0.000000e+00 1269/1392 (91%) EPI407981 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1868.1 0.000000e+00 1265/1391 (90%) EPI3007 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1868.1 0.000000e+00 1265/1391 (90%) EPI704456 A/duck/Hong Kong/934/1980 (A/H10N5) segment 6 (NA) 1862.5 0.000000e+00 1265/1392 (90%) EPI442011 A/goose/Guangdong/k0103/2010 (A/H5N5) segment 6 (NA) 1851.5 0.000000e+00 1262/1391 (90%) EPI418314 A/duck/Vietnam/OIE-707/2011 (A/H11N5) segment 6 (NA) 1812.7 0.000000e+00 1258/1394 (90%) EPI290489 A/common murre/Oregon/19497-004/2005 (A/H9N5) segment 6 (NA) 1785.0 0.000000e+00 1252/1393 (89%) EPI184639 A/mallard/Gurjev/263/1982 (A/H14N5) segment 6 (NA) 1785.0 0.000000e+00 1223/1350 (90%) EPI700304 A/duck/Cambodia/1426W44M3/2013 (A/H2N5) segment 6 (NA) 1707.4 0.000000e+00 1229/1379 (89%) EPI407910 A/shearwater/Australia/1/1973 (A/H6N5) segment 6 (NA) 1458.1 0.000000e+00 1202/1400 (85%) EPI242559 A/shearwater/Australia/1/1972 (A/H6N5) segment 6 (NA) 1458.1 0.000000e+00 1202/1400 (85%)
  18. niman
    Align Segment-ID Name Score E-Value Identity EPI931200 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI888600 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI873619 A/mute swan/Croatia/102/2016 (A/H5N5) segment 4 (HA) 3125.7 0.000000e+00 1700/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI916604 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI909452 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI952639 A/chicken/Korea/H903/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI943320 A/pochard_duck/England/SA12_157809/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI930838 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI919636 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI959435 A/chicken/Poland/002/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI952782 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI942943 A/chicken/Wales/000023/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI930843 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI925956 A/gadwall/Chany/97/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI888277 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI931194 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI931145 A/duck/Czech Republic/1467-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI931110 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI909444 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI909364 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 3033.3 0.000000e+00 1683/1704 (98%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3033.3 0.000000e+00 1671/1686 (99%) EPI916503 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI916385 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI909436 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1684/1705 (98%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI959433 A/chicken/Poland/114/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI942935 A/turkey/England/003778/2017 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI917480 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI909428 A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%)
  19. niman
    Isolate name: A/mute swan/Poland/64/2017 Isolate ID: EPI_ISL_255917 Passage details/history: organ Type: A / H5N5 Lineage: Sample information Collection date: 2017-01-31 Host Cygnus olor Additional host information: Domestic status: Wild Is vaccinated: Location: Poland / Lower Silesian Voivodeship Additional location information: Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: National Veterinary Research Institut Poland, PIWet-PIB Sample ID given by the submitting laboratory: Authors: Swieton E., Smietanka K. Address: National Veterinary Research Institut Poland, PIWet-PIB Al. Partyzantow 57 24-100 Pulawy Poland Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/mute swan/Poland/64/2017 2308 EPI959442 PB1 A/mute swan/Poland/64/2017 2274 EPI959441 PA A/mute swan/Poland/64/2017 2151 EPI959440 HA A/mute swan/Poland/64/2017 1704 EPI959444 NP A/mute swan/Poland/64/2017 1478 EPI959438 NA A/mute swan/Poland/64/2017 1395 EPI959443 MP A/mute swan/Poland/64/2017 753 EPI959437 NS A/mute swan/Poland/64/2017 794 EPI959439 Submitter information Submitter: Świętoń, Edyta Submission Date: 2017-03-17 Last modifier: Świętoń, Edyta Last modified: 2017-03-17 Address: National Veterinary Research Institut Poland, PIWet-PIB Al. Partyzantow 57 24-100 Pulawy Poland
  20. niman
    National Veterinary Research Institut Poland has release sequences for all 8 gene segments from 2017 H5N5 isolate from a mute swan.
  21. niman
    Poultry meat and poultry products derived from birds raised, slaughtered, or processed in Lincoln County, Tennessee before March 6, 2017. Poultry meat and poultry products derived from birds raised, slaughtered, or processed in Barron County, Wisconsin before March 6, 2017. Poultry meat and poultry products derived from birds raised, slaughtered, or processed in Giles County, Tennessee before March 13, 2017.* https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Hong-Kong
  22. niman
    Fresh/frozen poultry and poultry products derived from birds from, slaughtered, processed or stored in the Lincoln County, Tennessee on or after March 4, 2017 and from Giles County, Tennessee on or after March 8, 2017 are ineligible for export.* https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Peru
  23. niman
    Poultry meat and poultry products derived from birds raised, slaughtered or processed from the following states on or after the respective dates below:* Wisconsin on or after March 10, 2017. * Tennessee on or after March 10, 2017. * https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Vietnam
  24. niman
    Ineligible Products All poultry and poultry products produced on or after March 4, 2017.* https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Congo-Brazzaville
  25. niman
    Whole frozen poultry, leg quarters, drumsticks, and thighs (chicken, turkey, and duck) derived from birds from Lincoln county, TN effective March 4, 2017.* https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Egypt
×
×
  • Create New...