niman

Align Segment-ID Name Score E-Value Identity EPI915870 A/duck/Taiwan/1702004/2017 (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI895136 A/whooper swan/Korea/Gangjin 49_1/2016 (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI888474 A/teal/Tottori/2/2016 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI866144 A/spot_billed_duck/Korea/WB141/2016(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI861585 A/environment/Kagoshima/KU-ngr-I/2016(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI895129 A/whooper swan/Korea/Gangjin 49_2/2016 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI866132 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI866093 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI866708 A/duck/Hyogo/1/2016 (A/H5N6) segment 4 (HA) 3083.2 0.000000e+00 1690/1701 (99%) EPI895106 A/whooper swan/Korea/Gangjin 48/2016 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI895074 A/environment/Korea/W544/2016 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI895073 A/environment/Korea/W543/2016 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI895072 A/environment/Korea/W542/2016 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI895071 A/environment/Korea/W541/2016 (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI867580 A/crane/Kagoshima/KU-4/2016(H5N6) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI866114 A/Eurasian eagle owl/Korea/960/2016(H5N6) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI866085 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI888466 A/teal/Tottori/1/2016 (A/H5N6) segment 4 (HA) 3077.6 0.000000e+00 1689/1701 (99%) EPI888458 A/black swan/Akita/2/2016 (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI888450 A/black swan/Akita/1/2016 (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI888441 A/Northern Pintail/Tottori/b37/2016 (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI866122 A/mandarin duck/Korea/T102-1/2016(H5N6) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI866077 A/chicken/Korea/H23/2016(H5N6) (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI760034 A/duck/Guangdong/01.01 SZSGXJK005-G /2016 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1688/1701 (99%) EPI760007 A/duck/Guangdong/01.01 SZSGXJK004-Y/2016 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1688/1701 (99%) EPI759991 A/duck/Guangdong/01.01 SZSGXJK002-G/2016 (A/H5N6) segment 4 (HA) 3070.3 0.000000e+00 1688/1701 (99%) EPI861484 A/Mandarin_duck/Korea/K16-187-3/2016 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1679/1689 (99%) EPI760050 A/duck/Guangdong/01.01 SZSGXJK006-G/2016 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1687/1701 (99%) EPI760026 A/duck/Guangdong/01.01 SZSGXJK005-Y/2016 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1687/1701 (99%) EPI759982 A/duck/Guangdong/01.01 SZSGXJK002-Y/2016 (A/H5N6) segment 4 (HA) 3064.7 0.000000e+00 1687/1701 (99%) EPI759966 A/duck/Guangdong/01.01 SZSGXJK001-Y /2016 (A/H5N6) segment 4 (HA) 3059.2 0.000000e+00 1686/1701 (99%) EPI866101 A/duck/Korea/H15/2016(H5N6) (A/H5N6) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%) EPI760042 A/duck/Guangdong/01.01 SZSGXJK006-Y/2016 (A/H5N6) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%) EPI759974 A/duck/Guangdong/01.01 SZSGXJK001-G/2016 (A/H5N6) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%) EPI760002 A/duck/Guangdong/01.01 SZSGXJK003-G/2016 (A/H5N6) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%) EPI687156 A/great_egret/Hong_Kong/00032/2016 (A/H5N6) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%) EPI760015 A/duck/Guangdong/01.01 SZSGXJK003-W/2016 (A/H5N6) segment 4 (HA) 3025.9 0.000000e+00 1680/1701 (98%) EPI758867 A/environment/Guangdong/GZ693/2015 (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI662079 A/environment/Guangdong/04.16 SZLGWLShui1/2015(H5N6) (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI661279 A/duck/Guangdong/04.23 DGQTSJ134-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI664373 A/duck/Guangdong/03.27 DGQTSJ121-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3003.8 0.000000e+00 1678/1703 (98%) EPI664325 A/duck/Guangdong/03.27 DGQTSJ133-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI664293 A/duck/Guangdong/04.22 DGCP083-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI662055 A/duck/Guangdong/04.16 SZLGWL002/2015(H5N6) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661479 A/duck/Guangdong/03.27 DGQTSJ129-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661351 A/duck/Guangdong/04.23 DGQTSJ138-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661335 A/duck/Guangdong/04.23 DGQTSJ138-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661327 A/duck/Guangdong/04.23 DGQTSJ135-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661319 A/duck/Guangdong/04.23 DGQTSJ135-P/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661311 A/duck/Guangdong/04.23 DGQTXC204-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661247 A/duck/Guangdong/04.23 DGQTSJ146-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661239 A/duck/Guangdong/04.23 DGQTSJ136-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661207 A/duck/Guangdong/04.23 DGQTSJ137-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI661191 A/duck/Guangdong/04.23 DGQTXC202-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI660775 A/duck/Guangdong/04.22 DGCP084-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI660503 A/goose/Guangdong/04.23 DGQTXC216-P/2015(H5N6) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI660351 A/duck/Guangdong/04.22 DGCP079-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI664237 A/duck/Guangdong/04.23 DGQTSJ127-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2998.2 0.000000e+00 1677/1703 (98%) EPI661295 A/duck/Guangdong/04.23 DGQTSJ128-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2998.2 0.000000e+00 1677/1703 (98%) EPI660599 A/duck/Guangdong/04.22 DGCP080-O/2015(H5N6) (A/H5N6) segment 4 (HA) 2998.2 0.000000e+00 1677/1703 (98%) EPI760089 A/feline/Guangdong/1/2015 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI664317 A/goose/Guangdong/03.27 DGQTSJ180-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI664301 A/duck/Guangdong/04.23 DGQTXC188-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI664197 A/goose/Guangdong/04.23 DGQTXC216-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI661343 A/duck/Guangdong/03.27 DGQTXC203-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI660455 A/goose/Guangdong/04.22 DGCP116-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI660007 A/goose/Guangdong/04.22 DGCP117-O/2015(H5N6) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI580408 A/feline/Guangdong/1/2014(H5N6) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI660711 A/duck/Guangdong/04.23 DGQTXC228-P/2015(H5N6) (A/H5N6) segment 4 (HA) 2992.7 0.000000e+00 1676/1703 (98%) EPI660663 A/duck/Guangdong/04.23 DGQTXC213-P/2015(H5N6) (A/H5N6) segment 4 (HA) 2992.7 0.000000e+00 1676/1703 (98%) EPI661223 A/duck/Guangdong/03.27 DGQTXC210-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI660679 A/duck/Guangdong/04.23 DGQTXC213-O/2015(H5N6) (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI760097 A/feline/Guangdong/2/2015 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI691378 A/ Guangdong /ZQ874/2015（H5N6） (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI661847 A/duck/Guangdong/02.11 DGCP094-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI661831 A/duck/Guangdong/02.11 DGCP092-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI661735 A/duck/Guangdong/02.11 DGCP104-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI661719 A/duck/Guangdong/02.11 DGCP102-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI580422 A/feline/Guangdong/2/2014(H5N6) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI760055 A/duck/Guangdong/01.01 SZSGXJK007-G/2016 (A/H5N6) segment 4 (HA) 2981.6 0.000000e+00 1640/1653 (99%) EPI661839 A/duck/Guangdong/02.11 DGCP093-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI661727 A/duck/Guangdong/02.11 DGCP103-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI660447 A/duck/Guangdong/04.23 DGQTXC228-O/2015(H5N6) (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%) EPI593896 A/duck/Guangzhou/41227/2014 (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%) EPI664253 A/goose/Guangdong/04.23 DGQTXC237-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2966.8 0.000000e+00 1672/1704 (98%) EPI660591 A/duck/Guangdong/04.22 DGCP067-O/2015(H5N6) (A/H5N6) segment 4 (HA) 2966.8 0.000000e+00 1672/1704 (98%) EPI660295 A/environment/Guangdong/04.22 DGCP027/2015(H5N6) (A/H5N6) segment 4 (HA) 2966.8 0.000000e+00 1672/1704 (98%) EPI660111 A/goose/Guangdong/04.22 DGCP106-O/2015(Mixed) (A/H5N6) segment 4 (HA) 2966.8 0.000000e+00 1672/1704 (98%) EPI676398 A/environment/GZ/76/2014 (A/H5N2) segment 4 (HA) 2961.3 0.000000e+00 1672/1705 (98%) EPI661807 A/environment/Guangdong/02.11 DGCPSJ050/2015(Mixed) (A/H5N6) segment 4 (HA) 2961.3 0.000000e+00 1671/1704 (98%) EPI661799 A/environment/Guangdong/02.11 DGQTSJ046E/2015(Mixed) (A/H5N6) segment 4 (HA) 2961.3 0.000000e+00 1671/1704 (98%) EPI660071 A/duck/Guangdong/04.22 DGCP069-O/2015(H5N6) (A/H5N6) segment 4 (HA) 2961.3 0.000000e+00 1671/1704 (98%) EPI658719 A/duck/Hunan/04.22 LDDX037-P/2015(H5N6) (A/H5N6) segment 4 (HA) 2961.3 0.000000e+00 1671/1704 (98%) EPI895124 A/chicken/Ganzhou/GZ50/2015 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1670/1704 (98%) EPI661911 A/environment/Guangdong/04.15 SZBAXQshui2/2015(H5N6) (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI656626 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI656602 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%

Isolate name: A/duck/Taiwan/1702004/2017 Isolate ID: EPI_ISL_248634 Passage details/history: Type: A / H5N6 Lineage: Sample information Collection date: 2017-02-03 Host Duck Additional host information: Domestic status: Is vaccinated: N Location: Taiwan Additional location information: Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Animal Health Research Institute Sample ID given by the submitting laboratory: Authors: Yu-Ju,Lin; Li-Hsuan,Chen; Wan-Chen,Li; Yen-Ping,Chen; Yu-Pin,Liu; Fan,Lee; Wen-Jane,Tu Address: Animal Health Research Institute 376 Chung-Cheng Rd., Tansui District 25158 New Taipei City Taiwan Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/duck/Taiwan/1702004/2017 2291 EPI915867 PB1 A/duck/Taiwan/1702004/2017 2298 EPI915868 PA A/duck/Taiwan/1702004/2017 2189 EPI915869 HA A/duck/Taiwan/1702004/2017 1725 EPI915870 NP A/duck/Taiwan/1702004/2017 1513 EPI915871 NA A/duck/Taiwan/1702004/2017 1388 EPI915872 MP A/duck/Taiwan/1702004/2017 978 EPI915873 NS A/duck/Taiwan/1702004/2017 827 EPI915874 Submitter information Submitter: Liu, Yu-Pin Submission Date: 2017-02-15 Last modifier: Liu, Yu-Pin Last modified: 2017-02-15 Address: Animal Health Research Institute 376 Chung-Cheng Rd., Tansui District 25158 New Taipei City Taiwan

Animal Health Research Institute has released full H5N6 sequence (at GISAID) from Feb 2017 collection from duck in Taiwan.

Align Segment-ID Name Score E-Value Identity EPI909453 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909461 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI909421 A/chicken/Voronezh/20/2017 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI909413 A/chicken/Voronezh/19/2017 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI909405 A/chicken/Voronezh/18/2017 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI909397 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI909389 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI909381 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI860394 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI861394 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP) 2739.7 0.000000e+00 1492/1497 (99%) EPI909437 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909365 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI860402 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI859656 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI888089 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI909429 A/turkey/Rostov/11/2017 (A/H5N8) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI909445 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2686.1 0.000000e+00 1460/1463 (99%) EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI869688 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI869945 A/herring gull/Poland/84/2016 (A/H5N8) segment 5 (NP) 2640.0 0.000000e+00 1437/1441 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2621.5 0.000000e+00 1471/1497 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2616.0 0.000000e+00 1470/1497 (98%) EPI889359 A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI890809 A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI890255 A/mallard duck/Netherlands/24/2009 (A/H6N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI889801 A/mallard duck/Netherlands/12/2012 (A/H6N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI891063 A/greater white-fronted goose/Netherlands/11/2009 (A/H6N1) segment 5 (NP) 2599.4 0.000000e+00 1468/1498 (97%) EPI891011 A/mallard duck/Netherlands/32/2013 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI890073 A/mallard duck/Netherlands/31/2013 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI890830 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI890355 A/mallard duck/Netherlands/1/2014 (A/H10N7) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI890009 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI891176 A/barnacle goose/Netherlands/1/2014 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI889498 A/mallard duck/Netherlands/9/2013 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI891191 A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI889267 A/mallard duck/Netherlands/6/2015 (A/H10N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI890956 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI890292 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI889306 A/mallard duck/Netherlands/33/2014 (A/H10N7) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI890023 A/greater white-fronted goose/Netherlands/4/2006 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI869810 A/duck/France/161108h/2016 (A/H5N8) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2544.0 0.000000e+00 1458/1498 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1450/1487 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2538.4 0.000000e+00 1457/1498 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2534.7 0.000000e+00 1436/1468 (97%) EPI887469 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 5 (NP) 2532.9 0.000000e+00 1456/1498 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2532.9 0.000000e+00 1456/1498 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI891082 A/mallard duck/Netherlands/18/2007 (A/H4N6) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI890628 A/mallard duck/Netherlands/28/2009 (A/H1N1) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2512.6 0.000000e+00 1418/1447 (97%) EPI889259 A/mallard duck/Netherlands/17/2009 (A/H6N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1435/1473 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1435/1473 (97%

Align Segment-ID Name Score E-Value Identity EPI909459 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909451 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI868847 A/turkey/England/052131/2016 (A/H5N8) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI909427 A/turkey/Rostov/11/2017 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI860400 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3936.3 0.000000e+00 2144/2151 (99%) EPI881285 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI869686 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI860392 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI859658 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2143/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2143/2151 (99%) EPI909443 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI861185 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3925.3 0.000000e+00 2141/2151 (99%) EPI909363 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 3 (PA) 3919.7 0.000000e+00 2141/2151 (99%) EPI909435 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909419 A/chicken/Voronezh/20/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909411 A/chicken/Voronezh/19/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909403 A/chicken/Voronezh/18/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909395 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909387 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909379 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI888087 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3655.6 0.000000e+00 2078/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3640.9 0.000000e+00 2094/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3629.8 0.000000e+00 2091/2153 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3629.8 0.000000e+00 2089/2151 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3618.7 0.000000e+00 2068/2122 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3616.9 0.000000e+00 2067/2121 (97%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3613.2 0.000000e+00 2086/2151 (96%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3602.1 0.000000e+00 2084/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3602.1 0.000000e+00 2084/2151 (96%) EPI889139 A/wild bird/Jiangxi/P419/2016 (A/H6N8) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3596.5 0.000000e+00 2065/2124 (97%) EPI890476 A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 3 (PA) 3591.0 0.000000e+00 2083/2152 (96%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3589.2 0.000000e+00 2065/2126 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3585.5 0.000000e+00 2082/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3585.5 0.000000e+00 2082/2152 (96%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3581.8 0.000000e+00 2049/2103 (97%) EPI889662 A/mallard duck/Netherlands/7/2012 (A/H1N1) segment 3 (PA) 3579.9 0.000000e+00 2081/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3579.9 0.000000e+00 2082/2153 (96%) EPI890932 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 3 (PA) 3574.4 0.000000e+00 2080/2152 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3568.8 0.000000e+00 2080/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3568.8 0.000000e+00 2073/2143 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3552.2 0.000000e+00 2077/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3552.2 0.000000e+00 2076/2152 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3541.1 0.000000e+00 2075/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%)

Align Segment-ID Name Score E-Value Identity EPI909450 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI909458 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 2 (PB1) 4194.9 0.000000e+00 2273/2274 (99%) EPI860495 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI860390 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI909362 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI881281 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI881276 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI860398 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI859659 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI909466 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4163.5 0.000000e+00 2267/2274 (99%) EPI909442 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI909426 A/turkey/Rostov/11/2017 (A/H5N8) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI869807 A/duck/France/161108h/2016 (A/H5N8) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4159.8 0.000000e+00 2266/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4159.8 0.000000e+00 2266/2274 (99%) EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4157.9 0.000000e+00 2266/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2265/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI909418 A/chicken/Voronezh/20/2017 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI909410 A/chicken/Voronezh/19/2017 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI909402 A/chicken/Voronezh/18/2017 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI909394 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI909386 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI909378 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2263/2271 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI909434 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2261/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI869943 A/herring gull/Poland/84/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2225/2229 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4076.7 0.000000e+00 2251/2275 (98%) EPI888086 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 2 (PB1) 4041.6 0.000000e+00 2198/2203 (99%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3928.9 0.000000e+00 2225/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3923.4 0.000000e+00 2224/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3901.2 0.000000e+00 2221/2275 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3884.6 0.000000e+00 2217/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3884.6 0.000000e+00 2217/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%) EPI891216 A/mallard duck/Netherlands/30/2011 (A/H6N4) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%)

Align Segment-ID Name Score E-Value Identity EPI909457 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI909449 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI868845 A/turkey/England/052131/2016 (A/H5N8) segment 1 (PB2) 4169.0 0.000000e+00 2272/2280 (99%) EPI909433 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI869684 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 1 (PB2) 4161.6 0.000000e+00 2271/2280 (99%) EPI881279 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4146.8 0.000000e+00 2268/2280 (99%) EPI909417 A/chicken/Voronezh/20/2017 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI909409 A/chicken/Voronezh/19/2017 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI909401 A/chicken/Voronezh/18/2017 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI909385 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI909377 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI909393 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI869942 A/herring gull/Poland/84/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI860399 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI859660 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI909441 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI909425 A/turkey/Rostov/11/2017 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI860391 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI860494 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 1 (PB2) 4132.1 0.000000e+00 2263/2276 (99%) EPI909361 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 1 (PB2) 4130.2 0.000000e+00 2265/2280 (99%) EPI888085 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 1 (PB2) 4122.8 0.000000e+00 2264/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4119.1 0.000000e+00 2263/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3928.9 0.000000e+00 2229/2280 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3928.9 0.000000e+00 2229/2280 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3923.4 0.000000e+00 2228/2280 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3840.3 0.000000e+00 2214/2281 (97%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2214/2281 (97%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3834.8 0.000000e+00 2213/2281 (97%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3812.6 0.000000e+00 2209/2281 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3812.6 0.000000e+00 2209/2281 (96%) EPI909465 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 1 (PB2) 3807.1 0.000000e+00 2209/2282 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3796.0 0.000000e+00 2205/2280 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%

Align Segment-ID Name Score E-Value Identity EPI909463 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI909455 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI860404 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI859654 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI909447 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI909439 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI909367 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI881282 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 978/979 (99%) EPI881277 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 978/979 (99%) EPI869946 A/herring gull/Poland/84/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI860498 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI860396 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1799.8 0.000000e+00 979/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1799.8 0.000000e+00 979/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1799.8 0.000000e+00 979/982 (99%) EPI909431 A/turkey/Rostov/11/2017 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI888091 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI888279 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 977/981 (99%) EPI909423 A/chicken/Voronezh/20/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909415 A/chicken/Voronezh/19/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909407 A/chicken/Voronezh/18/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909399 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909391 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909383 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI887471 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 7 (MP) 1790.5 0.000000e+00 977/981 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1790.5 0.000000e+00 975/978 (99%) EPI909469 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI890598 A/mallard duck/Netherlands/2/2015 (A/H7N7) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%)

Align Segment-ID Name Score E-Value Identity EPI909454 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI909462 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1403/1406 (99%) EPI909430 A/turkey/Rostov/11/2017 (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1403/1406 (99%) EPI869939 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI909446 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI909438 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI909406 A/chicken/Voronezh/18/2017 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI909398 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI909422 A/chicken/Voronezh/20/2017 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI909414 A/chicken/Voronezh/19/2017 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI909390 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI909382 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI869935 A/mute swan/Poland/108/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI869933 A/chicken/Poland/79A/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI869811 A/duck/France/161108h/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI861014 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI861010 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI860510 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI860403 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI860395 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI859655 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI888278 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI881900 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI909366 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 6 (NA) 2556.9 0.000000e+00 1398/1406 (99%) EPI888090 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 6 (NA) 2556.9 0.000000e+00 1398/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2555.0 0.000000e+00 1398/1406 (99%) EPI887470 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI881902 A/mute swan/Croatia/15/2017 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI873213 A/chicken/Croatia/103/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI869934 A/chicken/Poland/85A/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI861013 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1396/1406 (99%) EPI873627 A/mute swan/Croatia/104/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI861015 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1396/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI873625 A/mute swan/Croatia/9/2017 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869937 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869932 A/domestic goose/Poland/72/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI869925 A/domestic goose/Poland/33/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%)

Align Segment-ID Name Score E-Value Identity EPI909452 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3133.0 0.000000e+00 1701/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI909444 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI909436 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI888277 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 4 (HA) 3105.3 0.000000e+00 1696/1704 (99%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3105.3 0.000000e+00 1696/1704 (99%) EPI909428 A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI909404 A/chicken/Voronezh/18/2017 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI909396 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI909388 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI909380 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI888088 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI860401 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI859653 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1697/1705 (99%) EPI909364 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1683/1686 (99%) EPI909420 A/chicken/Voronezh/20/2017 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI909412 A/chicken/Voronezh/19/2017 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI869938 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI861224 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI909460 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI869927 A/chicken/Poland/79A/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI861012 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI860509 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1693/1704 (99%) EPI869928 A/chicken/Poland/85A/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI873626 A/mute swan/Croatia/104/2016 (A/H5N8) segment 4 (HA) 3085.0 0.000000e+00 1690/1700 (99%) EPI861222 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 4 (HA) 3085.0 0.000000e+00 1691/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%)

Isolate name: A/wild duck/Tatarstan/3059/2016 Isolate ID: EPI_ISL_247724 Passage details/history: e2 Type: A / H5N8 Lineage: Sample information Collection date: 2016-10-02 Host Duck Additional host information: Domestic status: Wild Is vaccinated: Location: Russian Federation / Republic of Tatarstan Additional location information: Health status: Healthy Specimen source: Cloacal swab Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: State Research Center of Virology and Biotechnology (VECTOR) Sample ID given by the submitting laboratory: Authors: Ivan,Susloparov; Natalya,Goncharova; Natalya,Kolosova; Vasiliy,Marchenko; Alexander,Ryzhikov Address: State Research Center of Virology and Biotechnology (VECTOR) Emerging Zoonotic Diseases and Influenza Vector Street Build 12 630559 Koltsovo Russian Federation Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/wild duck/Tatarstan/3059/2016 2341 EPI909449 PB1 A/wild duck/Tatarstan/3059/2016 2341 EPI909450 PA A/wild duck/Tatarstan/3059/2016 2233 EPI909451 HA A/wild duck/Tatarstan/3059/2016 1776 EPI909452 NP A/wild duck/Tatarstan/3059/2016 1565 EPI909453 NA A/wild duck/Tatarstan/3059/2016 1460 EPI909454 MP A/wild duck/Tatarstan/3059/2016 1027 EPI909455 NS A/wild duck/Tatarstan/3059/2016 890 EPI909456 Submitter information Submitter: Susloparov, Ivan Submission Date: 2017-02-12 Last modifier: Susloparov, Ivan Last modified: 2017-02-12 Address: State Research Center of Virology and Biotechnology (VECTOR) Emerging Zoonotic Diseases and Influenza Vector Street Build 12 630559 Koltsovo Russian Federation

Vector labs released a full H5N8 sequence from a wild duck in Tatarstan, Russia. A/wild duck/Tatarstan/3059/2016

Align Segment-ID Name Score E-Value Identity EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 827/829 (99%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 827/829 (99%) EPI909432 A/turkey/Rostov/11/2017 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 827/829 (99%) EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI888092 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 822/823 (99%) EPI869813 A/duck/France/161108h/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 820/820 (100%) EPI860405 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI859657 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909368 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI881283 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI860397 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI860499 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 8 (NS) 1506.1 0.000000e+00 819/821 (99%) EPI887472 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 818/820 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI881278 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 820/824 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1496.9 0.000000e+00 817/823 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 816/820 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 816/820 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 816/820 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 816/820 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI869947 A/herring gull/Poland/84/2016 (A/H5N8) segment 8 (NS) 1489.5 0.000000e+00 810/812 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1489.5 0.000000e+00 815/820 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 812/822 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1450.7 0.000000e+00 810/822 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 810/824 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 814/831 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 813/830 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 813/830 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 813/830 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI909421 A/chicken/Voronezh/20/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909413 A/chicken/Voronezh/19/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909405 A/chicken/Voronezh/18/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909397 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909389 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909381 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909437 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 5 (NP) 2748.9 0.000000e+00 1494/1497 (99%) EPI909453 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI888089 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI860394 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI861394 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP) 2739.7 0.000000e+00 1492/1497 (99%) EPI909461 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909429 A/turkey/Rostov/11/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909365 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI860402 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI859656 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909445 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2686.1 0.000000e+00 1460/1463 (99%) EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI869688 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2660.3 0.000000e+00 1455/1463 (99%) EPI869945 A/herring gull/Poland/84/2016 (A/H5N8) segment 5 (NP) 2640.0 0.000000e+00 1437/1441 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2621.5 0.000000e+00 1471/1497 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2616.0 0.000000e+00 1470/1497 (98%) EPI889359 A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI890809 A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI890255 A/mallard duck/Netherlands/24/2009 (A/H6N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI889801 A/mallard duck/Netherlands/12/2012 (A/H6N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI891063 A/greater white-fronted goose/Netherlands/11/2009 (A/H6N1) segment 5 (NP) 2599.4 0.000000e+00 1468/1498 (97%) EPI891011 A/mallard duck/Netherlands/32/2013 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI890073 A/mallard duck/Netherlands/31/2013 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI890830 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI890355 A/mallard duck/Netherlands/1/2014 (A/H10N7) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI890009 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI891176 A/barnacle goose/Netherlands/1/2014 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI889498 A/mallard duck/Netherlands/9/2013 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI891191 A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI889267 A/mallard duck/Netherlands/6/2015 (A/H10N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI890956 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI890292 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI889306 A/mallard duck/Netherlands/33/2014 (A/H10N7) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI890023 A/greater white-fronted goose/Netherlands/4/2006 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2545.8 0.000000e+00 1438/1468 (97%) EPI869810 A/duck/France/161108h/2016 (A/H5N8) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2544.0 0.000000e+00 1458/1498 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2544.0 0.000000e+00 1458/1498 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1450/1487 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI887469 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 5 (NP) 2532.9 0.000000e+00 1456/1498 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI891082 A/mallard duck/Netherlands/18/2007 (A/H4N6) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI890628 A/mallard duck/Netherlands/28/2009 (A/H1N1) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2512.6 0.000000e+00 1418/1447 (97%) EPI889259 A/mallard duck/Netherlands/17/2009 (A/H6N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1435/1473 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1435/1473 (97%)

Align Segment-ID Name Score E-Value Identity EPI909419 A/chicken/Voronezh/20/2017 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909411 A/chicken/Voronezh/19/2017 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909403 A/chicken/Voronezh/18/2017 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909395 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909387 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909379 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909427 A/turkey/Rostov/11/2017 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI868847 A/turkey/England/052131/2016 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI860400 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3925.3 0.000000e+00 2142/2151 (99%) EPI881285 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI869686 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI860392 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI859658 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2141/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2141/2151 (99%) EPI909459 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909451 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI861185 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3914.2 0.000000e+00 2139/2151 (99%) EPI909363 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 3 (PA) 3908.6 0.000000e+00 2139/2151 (99%) EPI909443 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI909435 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI888087 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3633.5 0.000000e+00 2074/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3618.7 0.000000e+00 2090/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3607.6 0.000000e+00 2087/2153 (96%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3607.6 0.000000e+00 2066/2122 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3607.6 0.000000e+00 2085/2151 (96%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3605.8 0.000000e+00 2065/2121 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3602.1 0.000000e+00 2086/2153 (96%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3591.0 0.000000e+00 2083/2152 (96%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3591.0 0.000000e+00 2082/2151 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3591.0 0.000000e+00 2082/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3591.0 0.000000e+00 2082/2151 (96%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3585.5 0.000000e+00 2082/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3585.5 0.000000e+00 2082/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3579.9 0.000000e+00 2081/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3579.9 0.000000e+00 2081/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3579.9 0.000000e+00 2081/2152 (96%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3578.1 0.000000e+00 2063/2126 (97%) EPI889139 A/wild bird/Jiangxi/P419/2016 (A/H6N8) segment 3 (PA) 3574.4 0.000000e+00 2080/2152 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3574.4 0.000000e+00 2061/2124 (97%) EPI890476 A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 3 (PA) 3568.8 0.000000e+00 2079/2152 (96%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3565.2 0.000000e+00 2046/2103 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3563.3 0.000000e+00 2078/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3563.3 0.000000e+00 2078/2152 (96%) EPI890932 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 3 (PA) 3557.8 0.000000e+00 2077/2152 (96%) EPI889662 A/mallard duck/Netherlands/7/2012 (A/H1N1) segment 3 (PA) 3557.8 0.000000e+00 2077/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3546.7 0.000000e+00 2076/2153 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3546.7 0.000000e+00 2076/2153 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3535.6 0.000000e+00 2074/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3535.6 0.000000e+00 2074/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3535.6 0.000000e+00 2074/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3535.6 0.000000e+00 2074/2153 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3530.1 0.000000e+00 2073/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3530.1 0.000000e+00 2072/2152 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI372287 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%)

Align Segment-ID Name Score E-Value Identity EPI909418 A/chicken/Voronezh/20/2017 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI909410 A/chicken/Voronezh/19/2017 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI909402 A/chicken/Voronezh/18/2017 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI909394 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI909386 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI909378 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI909426 A/turkey/Rostov/11/2017 (A/H5N8) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI909458 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4152.4 0.000000e+00 2265/2274 (99%) EPI909450 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI909434 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI860495 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI860390 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI909466 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI909362 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI881281 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI881276 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI860398 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI859659 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2260/2274 (99%) EPI909442 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI869807 A/duck/France/161108h/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4121.0 0.000000e+00 2259/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4121.0 0.000000e+00 2259/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2258/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2256/2271 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2254/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI869943 A/herring gull/Poland/84/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2218/2229 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4037.9 0.000000e+00 2244/2275 (98%) EPI888086 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 2 (PB1) 4002.8 0.000000e+00 2191/2203 (99%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2217/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3862.5 0.000000e+00 2214/2275 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3851.4 0.000000e+00 2212/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI891216 A/mallard duck/Netherlands/30/2011 (A/H6N4) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%

Align Segment-ID Name Score E-Value Identity EPI909417 A/chicken/Voronezh/20/2017 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI909409 A/chicken/Voronezh/19/2017 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI909401 A/chicken/Voronezh/18/2017 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI909385 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI909377 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI909393 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI909433 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI869684 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 1 (PB2) 4161.6 0.000000e+00 2271/2280 (99%) EPI881279 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI868845 A/turkey/England/052131/2016 (A/H5N8) segment 1 (PB2) 4146.8 0.000000e+00 2268/2280 (99%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4146.8 0.000000e+00 2268/2280 (99%) EPI909457 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI909449 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI869942 A/herring gull/Poland/84/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI860399 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI859660 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI909441 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI909425 A/turkey/Rostov/11/2017 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI860391 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI860494 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 1 (PB2) 4132.1 0.000000e+00 2263/2276 (99%) EPI909361 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 1 (PB2) 4130.2 0.000000e+00 2265/2280 (99%) EPI888085 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 1 (PB2) 4122.8 0.000000e+00 2264/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4119.1 0.000000e+00 2263/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3945.6 0.000000e+00 2233/2281 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3928.9 0.000000e+00 2230/2281 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3923.4 0.000000e+00 2229/2281 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3923.4 0.000000e+00 2229/2281 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3917.9 0.000000e+00 2228/2281 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3895.7 0.000000e+00 2224/2281 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3890.2 0.000000e+00 2223/2281 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2219/2280 (97%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3856.9 0.000000e+00 2218/2282 (97%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3851.4 0.000000e+00 2217/2282 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 3834.8 0.000000e+00 2213/2281 (97%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3818.1 0.000000e+00 2211/2282 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3812.6 0.000000e+00 2209/2281 (96%) EPI909465 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%)

Align Segment-ID Name Score E-Value Identity EPI909423 A/chicken/Voronezh/20/2017 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI909415 A/chicken/Voronezh/19/2017 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI909407 A/chicken/Voronezh/18/2017 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI909399 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI909391 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI909383 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI909463 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909455 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909447 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909439 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI909431 A/turkey/Rostov/11/2017 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI888091 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI860404 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI859654 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI909367 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI881282 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 974/979 (99%) EPI881277 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 974/979 (99%) EPI869946 A/herring gull/Poland/84/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI860498 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI860396 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1777.6 0.000000e+00 975/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1777.6 0.000000e+00 975/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1777.6 0.000000e+00 975/982 (99%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888279 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP) 1772.1 0.000000e+00 973/981 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI887471 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 7 (MP) 1768.4 0.000000e+00 973/981 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1768.4 0.000000e+00 971/978 (99%) EPI909469 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 968/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1725.9 0.000000e+00 967/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI890598 A/mallard duck/Netherlands/2/2015 (A/H7N7) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%)

Align Segment-ID Name Score E-Value Identity EPI909422 A/chicken/Voronezh/20/2017 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI909414 A/chicken/Voronezh/19/2017 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI909406 A/chicken/Voronezh/18/2017 (A/H5N8) segment 6 (NA) 2592.0 0.000000e+00 1405/1406 (99%) EPI909398 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 6 (NA) 2592.0 0.000000e+00 1405/1406 (99%) EPI909390 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 6 (NA) 2586.4 0.000000e+00 1404/1406 (99%) EPI909382 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 6 (NA) 2586.4 0.000000e+00 1404/1406 (99%) EPI869939 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 6 (NA) 2586.4 0.000000e+00 1404/1406 (99%) EPI909430 A/turkey/Rostov/11/2017 (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1403/1406 (99%) EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI909462 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI909438 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI909454 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI909446 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI869935 A/mute swan/Poland/108/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI869933 A/chicken/Poland/79A/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI869811 A/duck/France/161108h/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI861014 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI861010 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI860510 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI860403 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI860395 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859655 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI888278 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI881900 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI909366 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 6 (NA) 2545.8 0.000000e+00 1396/1406 (99%) EPI888090 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 6 (NA) 2545.8 0.000000e+00 1396/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2544.0 0.000000e+00 1396/1406 (99%) EPI887470 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI881902 A/mute swan/Croatia/15/2017 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI873213 A/chicken/Croatia/103/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869934 A/chicken/Poland/85A/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI861013 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1394/1406 (99%) EPI873627 A/mute swan/Croatia/104/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI861015 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1394/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1393/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1393/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI873625 A/mute swan/Croatia/9/2017 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI869937 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1392/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI869932 A/domestic goose/Poland/72/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI869925 A/domestic goose/Poland/33/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%)

Align Segment-ID Name Score E-Value Identity EPI909420 A/chicken/Voronezh/20/2017 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI909412 A/chicken/Voronezh/19/2017 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI909404 A/chicken/Voronezh/18/2017 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI909396 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI909388 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI909380 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI869938 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI909460 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI909444 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI909436 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3110.9 0.000000e+00 1697/1704 (99%) EPI909428 A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI860401 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI859653 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI909364 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 3105.3 0.000000e+00 1696/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI861224 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI909452 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI888088 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI861012 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI860509 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI861222 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 4 (HA) 3090.6 0.000000e+00 1692/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3077.6 0.000000e+00 1691/1704 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3077.6 0.000000e+00 1691/1704 (99%) EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI888277 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1690/1705 (99%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1676/1686 (99%) EPI869927 A/chicken/Poland/79A/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI869928 A/chicken/Poland/85A/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI873626 A/mute swan/Croatia/104/2016 (A/H5N8) segment 4 (HA) 3046.2 0.000000e+00 1683/1700 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%)

Isolate name: A/chicken/Voronezh/20/2017 Isolate ID: EPI_ISL_247720 Passage details/history: e2 Type: A / H5N8 Lineage: Sample information Collection date: 2017-01-06 Host Gallus gallus Additional host information: Domestic status: Domestic Is vaccinated: Location: Russian Federation / Voronezh Oblast Additional location information: Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: State Research Center of Virology and Biotechnology (VECTOR) Sample ID given by the submitting laboratory: Authors: Ivan,Susloparov; Natalya,Goncharova; Natalya,Kolosova; Vasiliy,Marchenko; Alexander,Ryzhikov Address: State Research Center of Virology and Biotechnology (VECTOR) Emerging Zoonotic Diseases and Influenza Vector Street Build 12 630559 Koltsovo Russian Federation Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/chicken/Voronezh/20/2017 2341 EPI909417 PB1 A/chicken/Voronezh/20/2017 2341 EPI909418 PA A/chicken/Voronezh/20/2017 2233 EPI909419 HA A/chicken/Voronezh/20/2017 1776 EPI909420 NP A/chicken/Voronezh/20/2017 1565 EPI909421 NA A/chicken/Voronezh/20/2017 1460 EPI909422 MP A/chicken/Voronezh/20/2017 1027 EPI909423 NS A/chicken/Voronezh/20/2017 890 EPI909424 Submitter information Submitter: Susloparov, Ivan Submission Date: 2017-02-11 Last modifier: Susloparov, Ivan Last modified: 2017-02-11 Address: State Research Center of Virology and Biotechnology (VECTOR) Emerging Zoonotic Diseases and Influenza Vector Street Build 12 630559 Koltsovo Russian Federation

Vectors has released a panel of full 2017 H5N8 sequences from Voronezh, Russia

Align Segment-ID Name Score E-Value Identity EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 826/829 (99%) EPI888092 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 821/823 (99%) EPI869813 A/duck/France/161108h/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI860405 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI859657 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI909432 A/turkey/Rostov/11/2017 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI909368 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI881283 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI860397 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI860499 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 818/821 (99%) EPI887472 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 817/820 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 817/820 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI881278 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 8 (NS) 1495.1 0.000000e+00 819/824 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1491.4 0.000000e+00 816/823 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI869947 A/herring gull/Poland/84/2016 (A/H5N8) segment 8 (NS) 1484.0 0.000000e+00 809/812 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1484.0 0.000000e+00 814/820 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 817/824 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 811/822 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 815/830 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1445.2 0.000000e+00 809/822 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 809/824 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 813/831 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%)

Align Segment-ID Name Score E-Value Identity EPI909461 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI909453 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI909421 A/chicken/Voronezh/20/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909413 A/chicken/Voronezh/19/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909405 A/chicken/Voronezh/18/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909397 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909389 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI909381 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI860394 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI861394 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP) 2734.2 0.000000e+00 1491/1497 (99%) EPI909437 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI909365 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI860402 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI859656 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI888089 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI909429 A/turkey/Rostov/11/2017 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI909445 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2680.6 0.000000e+00 1459/1463 (99%) EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2669.5 0.000000e+00 1457/1463 (99%) EPI869688 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2643.7 0.000000e+00 1452/1463 (99%) EPI869945 A/herring gull/Poland/84/2016 (A/H5N8) segment 5 (NP) 2634.4 0.000000e+00 1436/1441 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2616.0 0.000000e+00 1470/1497 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI889359 A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI890809 A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI890255 A/mallard duck/Netherlands/24/2009 (A/H6N1) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI889801 A/mallard duck/Netherlands/12/2012 (A/H6N1) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI891063 A/greater white-fronted goose/Netherlands/11/2009 (A/H6N1) segment 5 (NP) 2593.8 0.000000e+00 1467/1498 (97%) EPI891011 A/mallard duck/Netherlands/32/2013 (A/H10N7) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI890073 A/mallard duck/Netherlands/31/2013 (A/H10N7) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI890830 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI890355 A/mallard duck/Netherlands/1/2014 (A/H10N7) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI890009 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI891176 A/barnacle goose/Netherlands/1/2014 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI889498 A/mallard duck/Netherlands/9/2013 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI891191 A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI889267 A/mallard duck/Netherlands/6/2015 (A/H10N7) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI890956 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI890292 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI889306 A/mallard duck/Netherlands/33/2014 (A/H10N7) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI890023 A/greater white-fronted goose/Netherlands/4/2006 (A/H6N8) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI869810 A/duck/France/161108h/2016 (A/H5N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2538.4 0.000000e+00 1457/1498 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2536.6 0.000000e+00 1449/1487 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2532.9 0.000000e+00 1456/1498 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2529.2 0.000000e+00 1435/1468 (97%) EPI887469 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 5 (NP) 2527.3 0.000000e+00 1455/1498 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2527.3 0.000000e+00 1455/1498 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI891082 A/mallard duck/Netherlands/18/2007 (A/H4N6) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI890628 A/mallard duck/Netherlands/28/2009 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2510.7 0.000000e+00 1452/1498 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2510.7 0.000000e+00 1452/1498 (96%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2507.0 0.000000e+00 1417/1447 (97%) EPI889259 A/mallard duck/Netherlands/17/2009 (A/H6N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2505.2 0.000000e+00 1434/1473 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2505.2 0.000000e+00 1434/1473 (97%)

Align Segment-ID Name Score E-Value Identity EPI909459 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI909451 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI868847 A/turkey/England/052131/2016 (A/H5N8) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI909427 A/turkey/Rostov/11/2017 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI860400 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3936.3 0.000000e+00 2144/2151 (99%) EPI881285 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI869686 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI860392 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI859658 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2143/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2143/2151 (99%) EPI909443 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI861185 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3925.3 0.000000e+00 2141/2151 (99%) EPI909363 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 3 (PA) 3919.7 0.000000e+00 2141/2151 (99%) EPI909435 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909419 A/chicken/Voronezh/20/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909411 A/chicken/Voronezh/19/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909403 A/chicken/Voronezh/18/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909395 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909387 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI909379 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI888087 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3655.6 0.000000e+00 2078/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3640.9 0.000000e+00 2094/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3629.8 0.000000e+00 2091/2153 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3629.8 0.000000e+00 2089/2151 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3618.7 0.000000e+00 2068/2122 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3616.9 0.000000e+00 2067/2121 (97%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3613.2 0.000000e+00 2086/2151 (96%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3602.1 0.000000e+00 2085/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3602.1 0.000000e+00 2084/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3602.1 0.000000e+00 2084/2151 (96%) EPI889139 A/wild bird/Jiangxi/P419/2016 (A/H6N8) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3596.5 0.000000e+00 2065/2124 (97%) EPI890476 A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 3 (PA) 3591.0 0.000000e+00 2083/2152 (96%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3589.2 0.000000e+00 2065/2126 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3585.5 0.000000e+00 2082/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3585.5 0.000000e+00 2082/2152 (96%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3581.8 0.000000e+00 2049/2103 (97%) EPI889662 A/mallard duck/Netherlands/7/2012 (A/H1N1) segment 3 (PA) 3579.9 0.000000e+00 2081/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3579.9 0.000000e+00 2082/2153 (96%) EPI890932 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 3 (PA) 3574.4 0.000000e+00 2080/2152 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3568.8 0.000000e+00 2080/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3568.8 0.000000e+00 2073/2143 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3552.2 0.000000e+00 2077/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3552.2 0.000000e+00 2076/2152 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3541.1 0.000000e+00 2075/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%)