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niman

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  1. niman
    Isolate name: A/Hong Kong/VB17002884/2017 Isolate ID: EPI_ISL_240829 Passage details/history: Original Type: A / H7N9 Lineage: Sample information Collection date: 2017-01-05 Host Human Additional host information: Zip code: Patient status: In-patient Last vaccinated: In-vivo pathogenicity test: Location: Hong Kong (SAR) Additional location information: Patient age: 62 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Tracheal Institute information Originating lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the sample provider: Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Submitting lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the submitting laboratory: VB17002884 Authors: Mak,G.C.; Lo,J.Y.C. Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Hong Kong/VB17002884/2017_s1 2280 EPI874335 PB1 A/Hong Kong/VB17002884/2017_s2 2274 EPI874336 PA A/Hong Kong/VB17002884/2017_s3 2151 EPI874334 HA A/Hong Kong/VB17002884/2017_s4 1683 EPI874338 NP A/Hong Kong/VB17002884/2017_s5 1497 EPI874331 NA A/Hong Kong/VB17002884/2017_s6 1398 EPI874337 MP A/Hong Kong/VB17002884/2017_s7 982 EPI874333 NS A/Hong Kong/VB17002884/2017_s8 838 EPI874332 Submitter information Submitter: Mak, Gannon Submission Date: 2017-01-12 Last modifier: Mak, Gannon Last modified: 2017-01-12 Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR)
  2. niman
    Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=18hzYEnr0cRj2MpRMciJAN_b2e6s&ll=22.369409633676895%2C114.11816138621828&z=18
  3. niman
    The Centre for Health Protection (CHP) of the Department of Health is today (January 5) investigating an imported human case of avian influenza A(H7N9) in Hong Kong, and again urged the public to maintain strict personal, food and environmental hygiene both locally and during travel. The male patient, aged 62 with underlying illnesses, departed Hong Kong since December 15 last year and travelled to Zengcheng, Guangzhou. He has developed fever, cough and shortness of breath since January 1. He was admitted to a hospital for treatment in Dongguan during January 2 to 3. The patient discharged himself against medical advice on January 3 and returned to Hong Kong via Lo Wu on the same day. He attended the Accident and Emergency Department of Yan Chai Hospital yesterday (January 4) and was admitted for treatment on the same day. His condition deteriorated today and has been transferred to intensive care unit for further management. The patient is now in critical condition. His endotracheal aspirate and nasopharyngeal aspirate specimen were confirmed to be positive for influenza A(H7N9) virus by the CHP's Public Health Laboratory Services Branch tonight. The patient denied recent exposure to poultry or wet market. His close contacts have remained asymptomatic so far and have been put under medical surveillance. Tracing of his other contacts in Hong Kong is underway. "The case has been reported to Guangdong and Macau health authorities. We are communicating with the Mainland authority to follow up the patient's exposure and movements in the Mainland. Based on information available thus far, it is classified as an imported case. Epidemiological investigations are ongoing," a spokesman for the CHP said. "Locally, three confirmed human cases of avian influenza A(H7N9) were recorded in the past three weeks. The activity of avian influenza is expected to increase in winter based on its seasonal pattern. Letters to doctors, hospitals, schools and institutions will be issued to alert them to the latest situation, " a spokesman for the CHP added. Meanwhile, the CHP is closely monitoring 14 additional human cases of avian influenza A(H7N9) in Guangdong. According to the Health and Family Planning Commission of Guangdong Province’s announcement today, the distribution of the additional cases of last month are as follows: Guangzhou (3), Jiangmen (3), Jieyang (2), Shenzhen (2), Zhaoqing (2), Dongguan (1) and Zhongshan (1). "The public should avoid touching birds, poultry or their droppings and visiting poultry markets or farms during travel, particularly in the upcoming Lunar New Year holidays. If feeling unwell such as having fever or cough, wear a mask and seek medical advice at once. Travellers returning from affected areas should consult doctors promptly if symptoms develop and let them know their travel history," the spokesman said. The CHP's Port Health Office conducts health surveillance measures at all boundary control points. Thermal imaging systems are in place for body temperature checks on inbound travellers. Suspected cases will be immediately referred to public hospitals for follow-up. The display of posters and broadcasting of health messages in departure and arrival halls as health education for travellers is underway. The travel industry and other stakeholders are regularly updated on the latest information. The public should maintain strict personal, hand, food and environmental hygiene and take heed of the advice below while handling poultry: Avoid touching poultry, birds, animals or their droppings; When buying live chickens, do not touch them and their droppings. Do not blow at their bottoms. Wash eggs with detergent if soiled with faecal matter and cook and consume them immediately. Always wash hands thoroughly with soap and water after handling chickens and eggs; Eggs should be cooked well until the white and yolk become firm. Do not eat raw eggs or dip cooked food into any sauce with raw eggs. Poultry should be cooked thoroughly. If there is pinkish juice running from the cooked poultry or the middle part of its bone is still red, the poultry should be cooked again until fully done; Wash hands frequently, especially before touching the mouth, nose or eyes, before handling food or eating, and after going to the toilet, touching public installations or equipment such as escalator handrails, elevator control panels or door knobs, or when hands are dirtied by respiratory secretions after coughing or sneezing; and Wear a mask if fever or respiratory symptoms develop, when going to a hospital or clinic, or while taking care of patients with fever or respiratory symptoms. The public may visit the CHP's pages for more information: the avian influenza page, the weekly Avian Influenza Report, global statistics and affected areas of avian influenza, the Facebook Page and the YouTube Channel. Ends/Thursday, January 5, 2017 Issued at HKT 23:40
  4. niman
    The male patient, aged 62 with underlying illnesses, departed Hong Kong since December 15 last year and travelled to Zengcheng, Guangzhou. He has developed fever, cough and shortness of breath since January 1. He was admitted to a hospital for treatment in Dongguan during January 2 to 3. The patient discharged himself against medical advice on January 3 and returned to Hong Kong via Lo Wu on the same day. He attended the Accident and Emergency Department of Yan Chai Hospital yesterday (January 4) and was admitted for treatment on the same day. His condition deteriorated today and has been transferred to intensive care unit for further management. The patient is now in critical condition. http://www.info.gov.hk/gia/general/201701/05/P2017010501042.htm
  5. niman
    Align Segment-ID Name Score E-Value Identity EPI884216 A/Hong Kong/214/2017 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI628362 A/Zhejiang/3/2014 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI602360 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI602293 A/duck/Jiangxi/36501/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601957 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601850 A/chicken/Jiangxi/31860/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601592 A/chicken/Jiangxi/1214/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601581 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601563 A/chicken/Jiangxi/36247/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601331 A/chicken/Jiangxi/1255/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601270 A/chicken/Jiangxi/1269/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601218 A/chicken/Jiangxi/36293/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI599792 A/chicken/Jiangxi/36226/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI599767 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI599569 A/chicken/Jiangxi/29075/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI596750 A/chicken/Jiangxi/30801/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI584150 A/chicken/Jiangxi/S3612/2013 (A/H10N8) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI578064 A/chicken/Jiangxi/33621/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI578055 A/chicken/Jiangxi/33583/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI578047 A/chicken/Jiangxi/33552/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI559411 A/Hong Kong/2550/2015 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI530512 A/Environment/Jiangxi/10726/2014 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI530482 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI530464 A/Environment/Jiangxi/03470/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI846043 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764649 A/chicken/Jiaxing/4640/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764619 A/chicken/Jiaxing/4490/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764537 A/chicken/Huzhou/4034/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI691661 A/chicken/Henan/141/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI691660 A/chicken/Henan/117/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI691659 A/chicken/Henan/114/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI681039 A/chicken/Zhejiang/4C91/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI681003 A/pigeon/Zhejiang/2P5/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI681002 A/pigeon/Zhejiang/2P4/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI663522 A/pigeon/Wuxi/0405007/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI663499 A/duck/Sunan/040802/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI663498 A/duck/Wuxi/04030204/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636948 A/Anhui/1-YK_RG39/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636941 A/Anhui/1-YK_RG38/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636934 A/Anhui/1-YK_RG37/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636918 A/Anhui/1-YK_RG35/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636911 A/Anhui/1-YK_RG34/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636881 A/Anhui/1-YK_RG30/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636874 A/Anhui/1-YK_RG29/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636867 A/Anhui/1-YK_RG28/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636860 A/Anhui/1-YK_RG27/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636853 A/Anhui/1-YK_RG26/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636844 A/Anhui/1-YK_RG25/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636837 A/Anhui/1-YK_RG24/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636830 A/Anhui/1-YK_RG23/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636823 A/Anhui/1-YK_RG22/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636816 A/Anhui/1-YK_RG21/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636809 A/Anhui/1-YK_RG20/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636798 A/Anhui/1-YK_RG19/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636791 A/Anhui/1-YK_RG18/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636784 A/Anhui/1-YK_RG17/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636777 A/Anhui/1-YK_RG16/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636770 A/Anhui/1-YK_RG15/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636763 A/Anhui/1-YK_RG14/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636756 A/Anhui/1-YK_RG13/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636749 A/Anhui/1-YK_RG12/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636742 A/Anhui/1-YK_RG10/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636734 A/Anhui/1-YK_RG09/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636726 A/Anhui/1-YK_RG08/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636719 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636712 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636705 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636698 A/Anhui/1-YK_RG04/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636691 A/Anhui/1-YK_RG03/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636684 A/Anhui/1-YK_RG02/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636677 A/Anhui/1-YK_RG01/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI628762 A/Zhejiang/8/2015 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI627603 A/Environment/Guangdong-Guangzhou/XN01070/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI627059 A/Guangdong/15SF053/2015 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620203 A/Anhui/1-BALF_RG6/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620196 A/Anhui/1-JCVI1_RG3/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620189 A/Anhui/1-JCVI1_RG2/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620182 A/Anhui/1-JCVI1_RG1/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620171 A/Anhui/1-BALF_RG9/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620164 A/Anhui/1-BALF_RG8/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620157 A/Anhui/1-BALF_RG7/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620146 A/Anhui/1-BALF_RG20/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620139 A/Anhui/1-BALF_RG19/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620132 A/Anhui/1-BALF_RG18/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620125 A/Anhui/1-BALF_RG17/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620122 A/Anhui/1-BALF_RG32/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620115 A/Anhui/1-BALF_RG31/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620108 A/Anhui/1-BALF_RG29/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620101 A/Anhui/1-BALF_RG21/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620096 A/Anhui/1-BALF_RG44/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620089 A/Anhui/1-BALF_RG43/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620082 A/Anhui/1-BALF_RG42/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620075 A/Anhui/1-BALF_RG41/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620068 A/Anhui/1-BALF_RG40/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620057 A/Anhui/1-BALF_RG1/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620050 A/Anhui/1-BALF_RG45/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620043 A/Anhui/1-BALF_RG5/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620036 A/Anhui/1-BALF_RG4/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620029 A/Anhui/1-BALF_RG3/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620022 A/Anhui/1-BALF_RG2/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
  6. niman
    Align Segment-ID Name Score E-Value Identity EPI884215 A/Hong Kong/214/2017 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI838112 A/chicken/Guangdong/SIC37/2015 (A/H9N2) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI843857 A/environment/Zhongshan/ZS201505/2015 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI654455 A/Environment/GD-CH_68/H9N2/2015-1 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1481/1494 (99%) EPI627698 A/Guangdong-Guangzhou/XN08763/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597592 A/chicken/Dongguan/1433/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597575 A/chicken/Dongguan/1415/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597559 A/chicken/Dongguan/1393/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597552 A/chicken/Dongguan/1382/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597543 A/chicken/Dongguan/1373/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597527 A/chicken/Dongguan/1318/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597513 A/chicken/Dongguan/1307/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597374 A/chicken/Dongguan/934/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597325 A/chicken/Dongguan/836/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597304 A/chicken/Dongguan/803/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597097 A/chicken/Dongguan/1523/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597085 A/silkie chicken/Dongguan/1516/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596995 A/chicken/Dongguan/1418/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596955 A/silkie chicken/Dongguan/1264/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596927 A/chicken/Dongguan/1057/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596855 A/chicken/Dongguan/856/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596818 A/chicken/Dongguan/584/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596790 A/chicken/Dongguan/449/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI592202 A/chicken/Dongguan/1096/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI583319 A/chicken/Dongguan/4040/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581973 A/silkie chicken/Dongguan/4126/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581959 A/chicken/Dongguan/4102/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581943 A/chicken/Dongguan/4063/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581936 A/chicken/Dongguan/4048/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581929 A/chicken/Dongguan/4037/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581908 A/chicken/Dongguan/3972/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581681 A/silkie chicken/Dongguan/3281/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI578179 A/chicken/Dongguan/1533/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI578172 A/chicken/Dongguan/1527/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI656149 A/GD-121/2014/H7N9/2014-02-19 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1477/1494 (98%) EPI628505 A/Guangdong/24999/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628481 A/Guangdong/02125/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628473 A/Guangdong/033/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628417 A/Guangdong/037/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628121 A/Guangdong/0031/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628113 A/Guangdong/0029/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627778 A/Guangdong-Guangzhou/XN00175/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627730 A/Guangdong-Guangzhou/XN06587/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627722 A/Guangdong/0024/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627666 A/Guangdong-Guangzhou/XN02778/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627634 A/Guangdong-Guangzhou/XN09086/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597497 A/silkie chicken/Dongguan/1271/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597475 A/chicken/Dongguan/1188/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597434 A/silkie chicken/Dongguan/994/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597413 A/silkie chicken/Dongguan/968/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597382 A/silkie chicken/Dongguan/966/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597339 A/chicken/Dongguan/850/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597332 A/chicken/Dongguan/843/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597311 A/chicken/Dongguan/815/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597295 A/chicken/Dongguan/795/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597266 A/chicken/Dongguan/748/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597259 A/chicken/Dongguan/744/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597245 A/chicken/Dongguan/709/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597238 A/silkie chicken/Dongguan/634/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597139 A/chicken/Dongguan/1666/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597125 A/chicken/Dongguan/1619/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597028 A/silkie chicken/Dongguan/1450/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597015 A/silkie chicken/Dongguan/1448/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596980 A/chicken/Dongguan/1312/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596967 A/silkie chicken/Dongguan/1274/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596961 A/silkie chicken/Dongguan/1268/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596863 A/chicken/Dongguan/891/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI592209 A/chicken/Dongguan/1358/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI583312 A/chicken/Dongguan/4064/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI583292 A/chicken/Dongguan/4119/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI583250 A/Shenzhen/SP-W1/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI582362 A/chicken/Dongguan/4195/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581992 A/silkie chicken/Dongguan/4129/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581986 A/silkie chicken/Dongguan/4128/2013 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581950 A/chicken/Dongguan/4094/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581923 A/silkie chicken/Dongguan/3990/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581757 A/silkie chicken/Dongguan/3526/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581745 A/silkie chicken/Dongguan/3522/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581739 A/silkie chicken/Dongguan/3520/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581732 A/chicken/Dongguan/3491/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581725 A/chicken/Dongguan/3488/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581704 A/chicken/Dongguan/3438/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581693 A/chicken/Dongguan/3418/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581650 A/chicken/Dongguan/3219/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581644 A/silkie chicken/Dongguan/3166/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581637 A/chicken/Dongguan/3146/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581630 A/chicken/Dongguan/3145/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581623 A/chicken/Dongguan/3141/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581610 A/silkie chicken/Dongguan/3049/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578193 A/silkie chicken/Dongguan/1641/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578153 A/silkie chicken/Dongguan/1519/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578146 A/chicken/Dongguan/1100/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578134 A/silkie chicken/Dongguan/953/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578086 A/chicken/Shenzhen/138/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578079 A/chicken/Dongguan/575/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578023 A/Shenzhen/SP116/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578016 A/Shenzhen/SP113/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI509881 A/Hong Kong/8113530/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627738 A/Guangdong/0010/2014 (A/H7N9) segment 5 (NP) 2662.1 0.000000e+00 1478/1497 (98%) EPI656087 A/GD-104/2014/H7N9/2014-02-11 (A/H7N9) segment 5 (NP) 2660.3 0.000000e+00 1476/1494 (98%)
  7. niman
    Align Segment-ID Name Score E-Value Identity EPI884218 A/Hong Kong/214/2017 (A/H7N9) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI874334 A/Hong Kong/VB17002884/2017 (A/H7N9) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI693856 A/Shenzhen/TH003/2016(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI628748 A/Anhui/33225/2015 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI869669 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI628700 A/Environment/Hunan/07626/2015 (A/H7N9) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI627013 A/Jiangsu/18828/2014 (A/H7N9) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI838067 A/chicken/Shandong/SIC34/2014 (A/H9N2) segment 3 (PA) 3796.0 0.000000e+00 2119/2151 (98%) EPI628716 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 3 (PA) 3796.0 0.000000e+00 2119/2151 (98%) EPI692495 A/duck/Hubei/S2227/2012 (A/H4N2) segment 3 (PA) 3779.4 0.000000e+00 2117/2152 (98%) EPI691871 A/chicken/Anhui/w107/2011 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2110/2143 (98%) EPI661507 A/environment/Guangdong/04.23 DGQTXC055/2015(Mixed) (A/H5N6) segment 3 (PA) 3768.3 0.000000e+00 2114/2151 (98%) EPI627189 A/Guangdong/15SF020/2015 (A/H7N9) segment 3 (PA) 3768.3 0.000000e+00 2114/2151 (98%) EPI529225 A/chicken/Shanghai/C/2011 (A/H9N2) segment 3 (PA) 3768.3 0.000000e+00 2115/2152 (98%) EPI466406 A/chicken/Jiangsu/MYJMF/2012 (A/H9N2) segment 3 (PA) 3768.3 0.000000e+00 2115/2152 (98%) EPI691877 A/chicken/Henan/322/2012 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI627069 A/Guangdong/15SF050/2015 (A/H7N9) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI594046 A/chicken/Jiangsu/XZ0616/2012 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI572883 A/chicken/Shandong/qd0427/2012 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI497525 A/environment/Jiangxi/00452/2013 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI515821 A/Chicken/Suzhou/097-2/2013 (A/H9N2) segment 3 (PA) 3760.9 0.000000e+00 2111/2148 (98%) EPI661915 A/chicken/Guangdong/04.15 SZBAXQ019/2015(H5N6) (A/H5N6) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%) EPI661427 A/chicken/Guangdong/04.16 LGWL013/2015(Mixed) (A/H5N6) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI580386 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%) EPI572890 A/chicken/Shaanxi/xa0414/2013 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI497541 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI466382 A/chicken/Jiangsu/CZYWP/2012 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI838040 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI580370 A/Chicken/Guangdong/CZ145/2015 (A/H7N9) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI572896 A/chicken/Hebei/1024/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI568776 A/chicken/Shandong/qd1115/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI497532 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI466270 A/chicken/Jiangsu/WJHRG/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI457673 A/environment/Shanghai/S1436/2013 (A/H7N9) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI580378 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%) EPI572876 A/chicken/Shandong/qd1224/2012 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI568778 A/chicken/Shandong/qd0107/2013 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI568777 A/chicken/Shandong/qd0307/2013 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI691903 A/pigeon/Hubei/269/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2106/2146 (98%) EPI691901 A/pigeon/Hubei/228/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2102/2140 (98%) EPI680745 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI680744 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI594071 A/chicken/Jiangsu/WJ58/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2112/2154 (98%) EPI577337 A/chicken/Wenzhou/3330/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI572898 A/chicken/Hebei/0109/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI532335 A/chicken/Zhejiang/C497/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI497516 A/environment/Jiangxi/00449/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI466294 A/chicken/Jiangsu/XZMG/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI691923 A/pigeon/Shanxi/87/2012 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2103/2143 (98%) EPI680743 A/chicken/Zhejiang/C493/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI598801 A/chicken/Jiangxi/6741/2013 (A/H0) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI594023 A/chicken/Shandong/0613/2012 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI572893 A/chicken/Liaoning/0517/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI557657 A/duck/Zhejiang/D485/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI532334 A/chicken/Zhejiang/C494/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI532292 A/pigeon/Zhejiang/P1/2013 (A/H7N9) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI497847 A/environment/Zhenjiang/4/2013 (A/H7N9) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI497499 A/environment/Chongqing/00516/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI466454 A/chicken/Jiangsu/ZJ4/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI450830 A/quail/Hangzhou/35/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI760825 A/chicken/Guangdong/10.16 SZLGKQHY-072/2015 (A/H5N6) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI654367 A/Environment/GD-QY_201/H9N2/2014-5 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2083/2115 (98%) EPI572885 A/chicken/Shandong/qd0225/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI487858 A/chicken/Rizhao/1436/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487857 A/chicken/Rizhao/1363/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487854 A/chicken/Rizhao/853/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487853 A/chicken/Rizhao/811/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487840 A/chicken/Wenzhou/614/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI487828 A/chicken/Wenzhou/666/2013 (A/H7N7) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI468351 A/chicken/Hangzhou/48-2/2013(H9N2) (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI466492 A/chicken/Jiangsu/CZ1/2012 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI466342 A/chicken/Jiangsu/XZWHL/2012 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI443658 A/chicken/Hangzhou/48-1/2013(H7N9) (A/H7N9) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI487839 A/chicken/Wenzhou/606/2013 (A/H9N2) segment 3 (PA) 3725.8 0.000000e+00 2107/2152 (97%) EPI838050 A/chicken/Guangxi/SIC15/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI729792 A/chicken/Shanghai/02/2015 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2110/2155 (97%) EPI691900 A/pigeon/Hubei/227/2012 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2101/2143 (98%) EPI680742 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680740 A/chicken/Zhejiang/C485/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680736 A/pigeon/Zhejiang/P5/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680735 A/pigeon/Zhejiang/P4/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680734 A/pigeon/Zhejiang/P3/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680724 A/quail/Zhejiang/A2/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680723 A/quail/Zhejiang/A1/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI654149 A/Environment/GD-ZS_162/H7N9/2014-5 (A/H7N9) segment 3 (PA) 3724.0 0.000000e+00 2082/2115 (98%) EPI599274 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599268 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599266 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599226 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599225 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599222 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599220 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598795 A/chicken/Jiangxi/36240/2013 (A/H0) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598714 A/chicken/Jiangxi/36266/2013 (A/H0) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598622 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598458 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598452 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598441 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598347 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI577063 A/chicken/Shenzhen/1047/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%)
  8. niman
    Align Segment-ID Name Score E-Value Identity EPI884220 A/Hong Kong/214/2017 (A/H7N9) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI685603 A/Shenzhen/TH001/2015 (H5N6) (A/H5N6) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI684539 A/Shenzhen/1/2015 (A/H5N6) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI654222 A/Environment/GD-GZ_791/H9N2/2014-10 (A/H9N2) segment 2 (PB1) 4054.5 0.000000e+00 2245/2270 (98%) EPI838028 A/chicken/Guangdong/SIC37/2015 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI691368 A/ Guangdong /SZ872/2015（H5N6） (A/H5N6) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI654438 A/Environment/GD-GZ_50/H9N2/2014-9 (A/H9N2) segment 2 (PB1) 4045.3 0.000000e+00 2242/2268 (98%) EPI596895 A/silkie chicken/Dongguan/978/2014 (A/H0) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI654460 A/Environment/GD-CH_68/H9N2/2015-1 (A/H9N2) segment 2 (PB1) 4037.9 0.000000e+00 2242/2270 (98%) EPI838021 A/chicken/Guangdong/SIC28/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI837995 A/chicken/Guangdong/SIC31/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI583459 A/chicken/Shenzhen/1488/2013 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI583445 A/chicken/Shenzhen/1377/2013 (A/H9N2) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI718497 A/chicken/Yuhang/1/2013 (A/H5N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI583409 A/chicken/Shenzhen/1036/2013 (A/H0) segment 2 (PB1) 4026.8 0.000000e+00 2240/2270 (98%) EPI583529 A/chicken/Shenzhen/2066/2013 (A/H9N2) segment 2 (PB1) 4025.0 0.000000e+00 2242/2274 (98%) EPI583376 A/chicken/Shenzhen/844/2013 (A/H9N2) segment 2 (PB1) 4025.0 0.000000e+00 2242/2274 (98%) EPI583416 A/chicken/Shenzhen/1047/2013 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI583690 A/chicken/Dongguan/3964/2013 (A/H9N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI627974 A/Guangdong/0081/2014 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI627782 A/Guangdong-Guangzhou/XN00175/2014 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI626991 A/Guangdong/15SF082/2015 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI583353 A/chicken/Shenzhen/515/2013 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI498035 A/Hong Kong/308/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI656028 A/GD-81/2014/H7N9/2014-01-30 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2238/2270 (98%) EPI627950 A/Guangdong/0069/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI844499 A/environment/Zhongshan/ZS201506/2015 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) EPI838005 A/chicken/Fujian/SIC13/2013 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) EPI680683 A/pigeon/Zhejiang/P5/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI680681 A/pigeon/Zhejiang/P3/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI583383 A/chicken/Shenzhen/881/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI532296 A/pigeon/Zhejiang/P1/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI468350 A/chicken/Hangzhou/48-2/2013(H9N2) (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI450829 A/quail/Hangzhou/35/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI443657 A/chicken/Hangzhou/48-1/2013(H7N9) (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI583473 A/chicken/Shenzhen/1591/2013 (A/H9N2) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI680690 A/chicken/Zhejiang/C493/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI680670 A/quail/Zhejiang/A1/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI627207 A/Guangdong/15SF002/2015 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI580361 A/Chicken/Guangdong/GZ068/2015 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI557660 A/duck/Zhejiang/D485/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI532330 A/chicken/Zhejiang/C494/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI443649 A/environment/Hangzhou/37/2013 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI656280 A/GD-2/2015/H7N9/2015-01-06 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI656068 A/GD-98/2014/H7N9/2014-02-06 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI656020 A/GD-69/2014/H7N9/2014-01-30 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI492269 A/environment/Zhejiang/13/2013 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI492262 A/environment/Zhejiang/09/2013 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI628646 A/Environment/Guangdong/21123/2015 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI580353 A/Environment/Guangdong/DG127/2015 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI580345 A/Chicken/Guangdong/DG120/2015 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI446456 A/Hangzhou/3/2013 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI656328 A/GD-44/2015/H7N9/2015-01-19 (A/H7N9) segment 2 (PB1) 3993.6 0.000000e+00 2234/2270 (98%) EPI654304 A/Environment/GD-ZQ_499/H9N2/2014-12 (A/H9N2) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI838027 A/chicken/Guangdong/SIC41/2015 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI838013 A/chicken/Guangdong/SIC1/2012 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI838009 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI764809 A/chicken/Beijing/11/2013 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI654325 A/Environment/GD-QY_71/H9N2/2014-4 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2232/2268 (98%) EPI627519 A/fujian/16/2014 (A/H7N9) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI654409 A/Environment/GD-YF_233/H9N2/2014-7 (A/H9N2) segment 2 (PB1) 3988.0 0.000000e+00 2233/2270 (98%) EPI654320 A/Environment/GD-MZ_308/H9N2/2014-4 (A/H9N2) segment 2 (PB1) 3982.5 0.000000e+00 2232/2270 (98%) EPI844498 A/environment/Zhongshan/ZS201505/2015 (A/H9N2) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI838031 A/chicken/Guangdong/SIC38/2015 (A/H9N2) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI457763 A/chicken/Zhejiang/SD007/2013 (A/H7N9) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI580325 A/Duck/Guangdong/DG103/2015 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580289 A/Chicken/Guangdong/DG592/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580281 A/Duck/Guangdong/DG527/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580273 A/Chicken/Guangdong/DG479/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580265 A/Chicken/Guangdong/DG478/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI566670 A/Hong Kong/8130773/2015 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI566090 A/Guangdong/02496/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI566034 A/Guangdong/15SF018/2015 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI468344 A/environment/Hangzhou/109-2/2013(H5N1) (A/H5N1) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI443673 A/environment/Hangzhou/109-1/2013(H7N9) (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI656296 A/GD-18/2015/H7N9/2015-01-11 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2230/2270 (98%) EPI831454 A/GD-155/2014/H7N9/2014-11-19 (A/H7N9) segment 2 (PB1) 3969.6 0.000000e+00 2230/2270 (98%) EPI627271 A/Guangdong/15SF001/2015 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI580335 A/Environment/Guangdong/DG104/2015 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI580311 A/Chicken/Guangdong/HZ098/2015 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI580297 A/Chicken/Guangdong/DG593/2014 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI553468 A/Hong Kong/8194273/2014 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI423865 A/brambling/Beijing/16/2012 (A/H9N2) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI656272 A/GD-1/2015/H7N9/2015-01-03 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2229/2270 (98%) EPI656504 A/GD-120/2015/H7N9/2015-03-10 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2229/2270 (98%) EPI572937 A/chicken/Beijing/0512/2013 (A/H9N2) segment 2 (PB1) 3962.2 0.000000e+00 2231/2274 (98%) EPI568782 A/chicken/Liaoning/1116/2012 (A/H9N2) segment 2 (PB1) 3962.2 0.000000e+00 2231/2274 (98%) EPI559415 A/Hong Kong/2550/2015 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2231/2274 (98%) EPI628710 A/Environment/Guangdong/22351/2015 (A/H7N9) segment 2 (PB1) 3956.6 0.000000e+00 2230/2274 (98%) EPI656360 A/GD-42/2015/H7N9/2015-01-25 (A/H7N9) segment 2 (PB1) 3954.8 0.000000e+00 2227/2270 (98%) EPI654258 A/Environment/GD-MM_281/H9N2/2014-11 (A/H9N2) segment 2 (PB1) 3954.8 0.000000e+00 2227/2270 (98%) EPI760085 A/environment/Guangdong/01.01 SZSGXJK006-E/2016 (A/H5N6) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI568781 A/chicken/Shandong/qd0312/2013 (A/H9N2) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI532348 A/chicken/Zhejiang/C11/2013 (A/H9N9) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI450848 A/Hangzhou/327/2013 (A/H7N9) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI572924 A/chicken/Shandong/lc0903/2013 (A/H9N2) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI845706 A/chicken/Shandong/903/2013 (A/H9N2) segment 2 (PB1) 3928.9 0.000000e+00 2225/2274 (97%) EPI656496 A/GD-95/2015/H7N9/2015-03-05 (A/H7N9) segment 2 (PB1) 3928.9 0.000000e+00 2221/2268 (97%) EPI568746 A/chicken/Tianjin/61/2012 (A/H9N2) segment 2 (PB1) 3928.9 0.000000e+00 2226/2275 (97%) EPI680671 A/quail/Zhejiang/A2/2013 (A/H9N2) segment 2 (PB1) 3923.4 0.000000e+00 2224/2274 (97%)
  9. niman
    Align Segment-ID Name Score E-Value Identity EPI884219 A/Hong Kong/214/2017 (A/H7N9) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI844491 A/environment/Zhongshan/ZS201601/2016 (A/H9N2) segment 1 (PB2) 4137.6 0.000000e+00 2266/2279 (99%) EPI844493 A/environment/Zhongshan/ZS201603/2016 (A/H9N2) segment 1 (PB2) 4121.0 0.000000e+00 2263/2279 (99%) EPI874335 A/Hong Kong/VB17002884/2017 (A/H7N9) segment 1 (PB2) 4111.8 0.000000e+00 2262/2280 (99%) EPI578196 A/chicken/Dongguan/1674/2014 (A/H9N2) segment 1 (PB2) 4021.3 0.000000e+00 2245/2279 (98%) EPI601321 A/chicken/Jiangxi/1255/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI600087 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI600052 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599500 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599458 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599430 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599423 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593590 A/chicken/Jiangxi/18526/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593568 A/chicken/Jiangxi/18523/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593502 A/chicken/Jiangxi/18491/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593420 A/chicken/Jiangxi/18466/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593410 A/chicken/Jiangxi/18457/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI602117 A/chicken/Jiangxi/18474/2013 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI600101 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI600073 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599528 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599493 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599472 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599465 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599444 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599416 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599408 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599401 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599394 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599387 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI593518 A/chicken/Jiangxi/18500/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI593482 A/chicken/Jiangxi/18486/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI593443 A/chicken/Jiangxi/18470/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI593394 A/chicken/Jiangxi/18035/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI578056 A/chicken/Jiangxi/33621/2013 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI837987 A/chicken/Sichuan/SIC36/2014 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI602354 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI602064 A/chicken/Jiangxi/19967/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601970 A/chicken/Jiangxi/1271/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI601930 A/chicken/Jiangxi/25941/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601920 A/chicken/Jiangxi/23273/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601892 A/chicken/Jiangxi/1286/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601604 A/chicken/Jiangxi/1288/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601543 A/chicken/Jiangxi/36240/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI601363 A/chicken/Jiangxi/1242/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601354 A/chicken/Jiangxi/1226/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601262 A/chicken/Jiangxi/1269/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI600108 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI600080 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI600066 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599814 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599786 A/chicken/Jiangxi/36226/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599747 A/chicken/Jiangxi/31856/2013 (A/H10N8) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599521 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599514 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599507 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599486 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599479 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599437 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI537478 A/chicken/B15/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI537469 A/chicken/77/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601486 A/chicken/Jiangxi/36274/2013 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2241/2279 (98%) EPI601332 A/chicken/Jiangxi/1257/2014 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI683196 A/duck/Wuhan/WHYF14/2014 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI623615 A/chicken/Hubei/2014 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI602461 A/chicken/Jiangxi/3152/2014 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI602083 A/chicken/Jiangxi/20471/2013 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI601593 A/chicken/Jiangxi/1218/2014 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI601024 A/chicken/Jiangxi/1289/2014 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI600293 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI600279 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI600094 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI600059 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI599733 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI599577 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI599570 A/chicken/Jiangxi/29086/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI599451 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI593629 A/chicken/Jiangxi/19463/2014 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI593346 A/chicken/Shantou/4832/2014 (A/H7N9) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI591968 A/chicken/Suzhou/4833/2013 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI589864 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI583824 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI557811 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI530485 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI530391 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI601871 A/chicken/Jiangxi/36242/2013 (A/H0) segment 1 (PB2) 3997.3 0.000000e+00 2240/2279 (98%) EPI601475 A/chicken/Jiangxi/36256/2013 (A/H0) segment 1 (PB2) 3997.3 0.000000e+00 2240/2279 (98%) EPI596740 A/chicken/Jiangxi/30801/2013 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2240/2279 (98%) EPI736582 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI601911 A/chicken/Jiangxi/23241/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI601613 A/chicken/Jiangxi/20420/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2241/2280 (98%) EPI601301 A/chicken/Jiangxi/1247/2014 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2241/2280 (98%) EPI601211 A/chicken/Jiangxi/36293/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI599373 A/duck/Jiangxi/36505/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI596731 A/chicken/Jiangxi/29132/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2241/2280 (98%) EPI593618 A/chicken/Jiangxi/19426/2014 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI593353 A/chicken/Shantou/4833/2014 (A/H7N9) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI583817 A/chicken/Suzhou/4837/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI583810 A/chicken/Suzhou/4822/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI578065 A/chicken/Jiangxi/36277/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%)
  10. niman
    Align Segment-ID Name Score E-Value Identity EPI884217 A/Hong Kong/214/2017 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI730490 A/Hong Kong/VB16049808/2016 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI843875 A/environment/Zhongshan/ZS201505/2015 (A/H9N2) segment 7 (MP) 1729.6 0.000000e+00 966/981 (98%) EPI838140 A/chicken/Guangxi/SIC19/2014 (A/H9N2) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI583470 A/chicken/Shenzhen/1544/2013 (A/H9N2) segment 7 (MP) 1716.7 0.000000e+00 964/982 (98%) EPI838129 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682980 A/duck/Wuhan/WHYF14/2014 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI664544 A/duck/Hunan/03.09 YYFQH0036-P/2015(Mixed) (A/H5N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602131 A/chicken/Jiangxi/18926/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602123 A/chicken/Jiangxi/18474/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602081 A/chicken/Jiangxi/19982/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602070 A/chicken/Jiangxi/19967/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602062 A/chicken/Jiangxi/19912/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI601359 A/chicken/Jiangxi/1226/2014 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600106 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600092 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600085 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600078 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600071 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600057 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599819 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599540 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599526 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599498 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599477 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599449 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599392 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599184 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI589862 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI589854 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI583328 A/chicken/Shenzhen/317/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI557786 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI469991 A/chicken/Hong Kong/JV75/2011 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI469990 A/chicken/Hong Kong/YU158/2011 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI469974 A/chicken/Hong Kong/FL96/2010 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI736588 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI692271 A/chicken/Shandong/WG18/2011 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI652908 A/chicken/Qingdao/017/2014 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602473 A/chicken/Jiangxi/5195/2014 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602320 A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602230 A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602216 A/chicken/Jiangxi/13249/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602163 A/chicken/Jiangxi/13274/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602156 A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602141 A/chicken/Jiangxi/18955/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601918 A/chicken/Jiangxi/23241/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601812 A/chicken/Jiangxi/36266/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601562 A/chicken/Jiangxi/36247/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601525 A/chicken/Jiangxi/20420/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601454 A/chicken/Jiangxi/13198/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601407 A/chicken/Jiangxi/13253/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601396 A/chicken/Jiangxi/13237/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601385 A/chicken/Jiangxi/13232/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601379 A/chicken/Jiangxi/1243/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601343 A/chicken/Jiangxi/13272/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601268 A/chicken/Jiangxi/1269/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601243 A/chicken/Jiangxi/13203/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601198 A/chicken/Jiangxi/13216/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601191 A/chicken/Jiangxi/13215/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601182 A/chicken/Jiangxi/13212/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601172 A/chicken/Jiangxi/13206/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601163 A/chicken/Jiangxi/13204/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601153 A/chicken/Jiangxi/13246/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601146 A/chicken/Jiangxi/13244/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601127 A/chicken/Jiangxi/13228/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601118 A/chicken/Jiangxi/13219/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601101 A/chicken/Jiangxi/13271/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601089 A/chicken/Jiangxi/13262/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601071 A/chicken/Jiangxi/13259/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600270 A/chicken/Jiangxi/13263/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600263 A/chicken/Jiangxi/13256/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600249 A/chicken/Jiangxi/13242/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600228 A/chicken/Jiangxi/13214/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600214 A/chicken/Jiangxi/13202/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600200 A/chicken/Jiangxi/12782/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600193 A/chicken/Jiangxi/12272/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599777 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599766 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599702 A/chicken/Jiangxi/23259/2013 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599561 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599547 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599505 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599484 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599470 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599456 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599428 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599421 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599414 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599406 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599399 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599281 A/chicken/Jiangxi/19960/2013 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594349 A/chicken/Jiangxi/10964/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594342 A/chicken/Jiangxi/10963/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594335 A/chicken/Jiangxi/10962/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594321 A/chicken/Jiangxi/10959/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594314 A/chicken/Jiangxi/10958/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594300 A/chicken/Jiangxi/10956/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594293 A/chicken/Jiangxi/10955/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594286 A/chicken/Jiangxi/10954/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594279 A/chicken/Jiangxi/10953/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%)
  11. niman
    Align Segment-ID Name Score E-Value Identity EPI884221 A/Hong Kong/214/2017 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI628647 A/Environment/Guangdong/21123/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627208 A/Guangdong/15SF002/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI626992 A/Guangdong/15SF082/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI580365 A/Chicken/Guangdong/GZ068/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627056 A/Guangdong/15SF051/2015 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI597535 A/chicken/Dongguan/1348/2014 (A/H0) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI597008 A/chicken/Dongguan/1424/2014 (A/H0) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI596988 A/chicken/Dongguan/1374/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI578165 A/chicken/Dongguan/1445/2014 (A/H0) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI601943 A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597586 A/chicken/Dongguan/1421/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597521 A/chicken/Dongguan/1314/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597504 A/chicken/Dongguan/1303/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597455 A/chicken/Dongguan/1124/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597429 A/silkie chicken/Dongguan/986/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597423 A/silkie chicken/Dongguan/981/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597401 A/silkie chicken/Dongguan/979/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597169 A/chicken/Dongguan/1108/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597162 A/chicken/Dongguan/1091/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597148 A/chicken/Dongguan/1670/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597134 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597079 A/chicken/Dongguan/1506/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597072 A/chicken/Dongguan/1505/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597056 A/silkie chicken/Dongguan/1473/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597048 A/chicken/Dongguan/1459/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597041 A/chicken/Dongguan/1456/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597035 A/silkie chicken/Dongguan/1451/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597023 A/silkie chicken/Dongguan/1449/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596974 A/chicken/Dongguan/1297/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596921 A/chicken/Dongguan/1051/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596886 A/silkie chicken/Dongguan/959/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596805 A/chicken/Dongguan/536/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596761 A/chicken/Dongguan/169/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593357 A/chicken/Shantou/4833/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593350 A/chicken/Shantou/4832/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593329 A/chicken/Shantou/4329/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593321 A/chicken/Shantou/4325/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593232 A/chicken/Shantou/2556/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593225 A/chicken/Shantou/2550/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593197 A/chicken/Shantou/2537/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI592203 A/chicken/Dongguan/1096/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI592195 A/Shenzhen/SP139/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI592188 A/Shenzhen/SP126/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578226 A/chicken/Dongguan/1697/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578218 A/chicken/Dongguan/1693/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578187 A/chicken/Dongguan/1548/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578141 A/silkie chicken/Dongguan/997/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578114 A/chicken/Shantou/1554/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578107 A/chicken/Shantou/1552/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578100 A/chicken/Shantou/1550/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578010 A/Shenzhen/SP62/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI516605 A/Hong Kong/8122430/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI509879 A/Hong Kong/4495/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI628535 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI628527 A/environment/Guangdong/25003/2013 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI628015 A/Guangdong/0075/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627983 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627855 A/Hunan/26938/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627847 A/Hunan/26937/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627760 A/Guangdong-Guangzhou/XN00429/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627720 A/Guangdong-Guangzhou/XN08664/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627696 A/Guangdong-Guangzhou/XN13392/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627648 A/Guangdong-Guangzhou/XN08423/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627632 A/Guangdong-Guangzhou/XN14050/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627064 A/Guangdong/15SF053/2015 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI597448 A/chicken/Dongguan/1022/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI597183 A/chicken/Dongguan/191/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI597155 A/chicken/Dongguan/1673/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593308 A/silkie chicken/Shantou/2056/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593302 A/silkie chicken/Shantou/2054/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593296 A/silkie chicken/Shantou/2050/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593239 A/chicken/Shantou/2562/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593204 A/chicken/Shantou/2538/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI580277 A/Chicken/Guangdong/DG479/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI578121 A/chicken/Shantou/1556/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI566091 A/Guangdong/02496/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI516597 A/Hong Kong/5581/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI505123 A/silky_chicken/Hong_Kong/1772-3/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627664 A/Guangdong-Guangzhou/XN00509/2014 (A/H7N9) segment 6 (NA) 2431.3 0.000000e+00 1370/1398 (97%) EPI730494 A/Hong Kong/VB16049808/2016 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI656289 A/GD-10/2015/H7N9/2015-01-06 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1354/1374 (98%) EPI628711 A/Environment/Guangdong/22351/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI597567 A/chicken/Dongguan/1401/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI597545 A/chicken/Dongguan/1373/2014 (A/H0) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI596856 A/chicken/Dongguan/856/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI593314 A/chicken/Shantou/3057/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI593211 A/chicken/Shantou/2539/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI583279 A/Shenzhen/SP48/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580339 A/Environment/Guangdong/DG104/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580329 A/Duck/Guangdong/DG103/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580301 A/Chicken/Guangdong/DG593/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580293 A/Chicken/Guangdong/DG592/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580285 A/Duck/Guangdong/DG527/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI578207 A/chicken/Dongguan/1690/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI578003 A/Shenzhen/SP75/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI566035 A/Guangdong/15SF018/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI520863 A/Hong Kong/5731/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI507086 A/Hong Kong/3263/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI578235 A/silkie chicken/Dongguan/1002/2014 (A/H0) segment 6 (NA) 2423.9 0.000000e+00 1369/1398 (97%)
  12. niman
    Align Segment-ID Name Score E-Value Identity EPI884222 A/Hong Kong/214/2017 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%) EPI627209 A/Guangdong/15SF002/2015 (A/H7N9) segment 4 (HA) 3005.6 0.000000e+00 1664/1683 (98%) EPI580363 A/Chicken/Guangdong/GZ068/2015 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI628648 A/Environment/Guangdong/21123/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1662/1684 (98%) EPI626993 A/Guangdong/15SF082/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1662/1684 (98%) EPI627057 A/Guangdong/15SF051/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627721 A/Guangdong-Guangzhou/XN08664/2014 (A/H7N9) segment 4 (HA) 2970.5 0.000000e+00 1658/1683 (98%) EPI601940 A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597584 A/chicken/Dongguan/1421/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597453 A/chicken/Dongguan/1124/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597446 A/chicken/Dongguan/1022/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597427 A/silkie chicken/Dongguan/986/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597421 A/silkie chicken/Dongguan/981/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597160 A/chicken/Dongguan/1091/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI592201 A/chicken/Dongguan/1096/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI592186 A/Shenzhen/SP126/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI578139 A/silkie chicken/Dongguan/997/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI509880 A/Hong Kong/4495/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI627665 A/Guangdong-Guangzhou/XN00509/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI627649 A/Guangdong-Guangzhou/XN08423/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597399 A/silkie chicken/Dongguan/979/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597181 A/chicken/Dongguan/191/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597167 A/chicken/Dongguan/1108/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597077 A/chicken/Dongguan/1506/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI596907 A/silkie chicken/Dongguan/988/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593237 A/chicken/Shantou/2562/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593216 A/chicken/Shantou/2546/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593202 A/chicken/Shantou/2538/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593195 A/chicken/Shantou/2537/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578119 A/chicken/Shantou/1556/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578112 A/chicken/Shantou/1554/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578105 A/chicken/Shantou/1552/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578098 A/chicken/Shantou/1550/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI656282 A/GD-2/2015/H7N9/2015-01-06 (A/H7N9) segment 4 (HA) 2955.8 0.000000e+00 1636/1654 (98%) EPI628536 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI597146 A/chicken/Dongguan/1670/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI597132 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI597067 A/chicken/Dongguan/1505/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI596881 A/silkie chicken/Dongguan/959/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI596759 A/chicken/Dongguan/169/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593306 A/silkie chicken/Shantou/2056/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593300 A/silkie chicken/Shantou/2054/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593294 A/silkie chicken/Shantou/2050/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593230 A/chicken/Shantou/2556/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593223 A/chicken/Shantou/2550/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI578224 A/chicken/Dongguan/1697/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI578213 A/chicken/Dongguan/1693/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI578205 A/chicken/Dongguan/1690/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI516606 A/Hong Kong/8122430/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI516598 A/Hong Kong/5581/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI656330 A/GD-44/2015/H7N9/2015-01-19 (A/H7N9) segment 4 (HA) 2950.2 0.000000e+00 1635/1654 (98%) EPI656290 A/GD-10/2015/H7N9/2015-01-06 (A/H7N9) segment 4 (HA) 2950.2 0.000000e+00 1635/1654 (98%) EPI627761 A/Guangdong-Guangzhou/XN00429/2014 (A/H7N9) segment 4 (HA) 2950.2 0.000000e+00 1653/1683 (98%) EPI730495 A/Hong Kong/VB16049808/2016 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1655/1684 (98%) EPI627856 A/Hunan/26938/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627848 A/Hunan/26937/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627689 A/Guangdong-Guangzhou/XN15122/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627625 A/Guangdong-Guangzhou/XN14670/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI597033 A/silkie chicken/Dongguan/1451/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI596803 A/chicken/Dongguan/536/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593312 A/chicken/Shantou/3057/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593209 A/chicken/Shantou/2539/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI597021 A/silkie chicken/Dongguan/1449/2014 (A/H0) segment 4 (HA) 2942.8 0.000000e+00 1651/1683 (98%) EPI520864 A/Hong Kong/5731/2014 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI656498 A/GD-95/2015/H7N9/2015-03-05 (A/H7N9) segment 4 (HA) 2939.1 0.000000e+00 1633/1654 (98%) EPI596919 A/chicken/Dongguan/1051/2014 (A/H7N9) segment 4 (HA) 2939.1 0.000000e+00 1650/1683 (98%) EPI708131 A/chicken/Guangdong/G1381/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1642/1668 (98%) EPI628096 A/Guangdong/0012/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI627633 A/Guangdong-Guangzhou/XN14050/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI593326 A/chicken/Shantou/4329/2014 (A/H0) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI593319 A/chicken/Shantou/4325/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI592193 A/Shenzhen/SP139/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI708036 A/chicken/Guangdong/G1392/2014 (A/H7N9) segment 4 (HA) 2933.6 0.000000e+00 1644/1672 (98%) EPI628496 A/Guangdong/02124/2014 (A/H7N9) segment 4 (HA) 2933.6 0.000000e+00 1651/1683 (98%) EPI707946 A/chicken/Guangdong/G1381/2014 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1641/1668 (98%) EPI628528 A/environment/Guangdong/25003/2013 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI627984 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI593355 A/chicken/Shantou/4833/2014 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI593348 A/chicken/Shantou/4832/2014 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI509205 Influenza A Virus (A/Malaysia/228/2014(H7N9)) segment 4 hemagglutinin (HA) gene (A/H7N9) segment 4 (HA) 2929.9 0.000000e+00 1638/1664 (98%) EPI628472 A/Guangdong/035/2014 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI627273 A/Guangdong/15SF001/2015 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI627201 A/Guangdong/15SF017/2015 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1651/1684 (98%) EPI583318 A/chicken/Dongguan/4040/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI583249 A/Shenzhen/SP-W1/2014 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581984 A/silkie chicken/Dongguan/4128/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581965 A/chicken/Dongguan/4114/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581958 A/chicken/Dongguan/4102/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581949 A/chicken/Dongguan/4094/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581942 A/chicken/Dongguan/4063/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581935 A/chicken/Dongguan/4048/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581907 A/chicken/Dongguan/3972/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581900 A/chicken/Dongguan/3945/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581886 A/chicken/Dongguan/3917/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581649 A/chicken/Dongguan/3219/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581629 A/chicken/Dongguan/3145/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI708039 A/chicken/Guangdong/G1521/2014 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1642/1672 (98%) EPI708038 A/chicken/Guangdong/G1519/2014 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1642/1672 (98%) EPI656442 A/GD-68/2015/H7N9/2015-02-08 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1630/1654 (98%) EPI656402 A/GD-51/2015/H7N9/2015-01-30 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1630/1654 (98%)
  13. niman
    Imported human case of avian influenza A(H7N9) confirmed ********************************************* The Centre for Health Protection (CHP) of the Department of Health today (January 11) reported that the suspected imported human case of avian influenza A(H7) affecting a boy aged 10 last night (January 10) has been laboratory confirmed. This is the fourth human H7N9 case in Hong Kong this winter. His nasopharyngeal aspirate tested positive for influenza A(H7N9) virus upon laboratory testing by the CHP's Public Health Laboratory Services Branch. Contact tracing has so far identified 27 close contacts and 70 other contacts. Close contacts are the patient's family and school contacts as well as relevant in-patients and visitors of Princess Margaret Hospital (PMH). All have remained asymptomatic. They will be given antiviral prophylaxis with oseltamivir (Tamiflu) for five days, advised to wear a mask and put under medical surveillance for 10 days following their last exposure to the patient. Other contacts include the patient's school contacts, healthcare workers (HCWs) of North Lantau Hospital and PMH and ambulance personnel involved in patient transfer. Four HCWs of PMH have mild symptoms. Two of them tested negative for influenza A and two are pending testing. The others have remained asymptomatic. They will be advised to wear a mask and will be put under medical surveillance for 10 days following their last exposure to the patient. From 2013 to date, 20 imported human H7N9 cases, including 13 males and seven females aged from 5 months to 85 years (median: 66.5 years), have been confirmed in Hong Kong, with seven deaths (35 per cent). "In view of the upcoming Lunar New Year holidays, adults and parents should look after children with extra care in personal, hand, food and environmental hygiene against infections during travel," a spokesman for the CHP said. "We strongly urge the public to avoid touching birds, poultry or their droppings and visiting poultry markets or farms during travel. If feeling unwell, such as having a fever or cough, wear a mask and seek medical advice at once. Travellers returning from affected areas should consult doctors promptly if symptoms develop, and actively inform the doctors of their travel history for prompt diagnosis and treatment," the spokesman said. In addition, the CHP is closely monitoring an additional human H7N9 case in Shanghai. According to the Shanghai Municipal Commission of Health and Family Planning, the patient is a man aged 60 from Hubei. "While local surveillance, prevention and control measures are in place, we will remain vigilant and work closely with the World Health Organization and relevant health authorities to monitor the latest developments," the spokesman said. As the H7N9 virus continues to be detected in animals and environments in the Mainland, additional human cases are expected in affected and possibly neighbouring areas. In view of the heavy trade and travel between the Mainland and Hong Kong, further sporadic imported human cases in Hong Kong every now and then are expected, especially in the coming few months. Ends/Wednesday, January 11, 2017 Issued at HKT 19:40 http://www.info.gov.hk/gia/general/201701/11/P2017011100831.htm
  14. niman
    Isolate name: A/Hong Kong/214/2017 Isolate ID: EPI_ISL_242275 Passage details/history: MDCK Type: A / H7N9 Lineage: Sample information Collection date: 2017-01-09 Host Human Additional host information: Zip code: Patient status: In-patient Last vaccinated: In-vivo pathogenicity test: Location: Hong Kong (SAR) Additional location information: Patient age: 10 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Nasopharyngeal Institute information Originating lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the sample provider: Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Submitting lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the submitting laboratory: VB17005301 Authors: Mak,G.C.; Lo,J.Y.C. Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Hong Kong/214/2017_s1 2280 EPI884219 PB1 A/Hong Kong/214/2017_s2 2274 EPI884220 PA A/Hong Kong/214/2017_s3 2151 EPI884218 HA A/Hong Kong/214/2017_s4 1683 EPI884222 NP A/Hong Kong/214/2017_s5 1497 EPI884215 NA A/Hong Kong/214/2017_s6 1398 EPI884221 MP A/Hong Kong/214/2017_s7 982 EPI884217 NS A/Hong Kong/214/2017_s8 838 EPI884216 Submitter information Submitter: Mak, Gannon Submission Date: 2017-01-20 Last modifier: Mak, Gannon Last modified: 2017-01-20 Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR)
  15. niman
    CHP has release a full H7N9 sequence (at GISAID) from 10M, A/Hong Kong/214/2017
  16. niman
    http://www.renseradio.com/listenlive.htm
  17. niman
    http://rense2.gsradio.net/rense/special/rense_121516_hr2.mp3
  18. niman
    Focus tonight {10 PM ET) will be H5N8 Dr. Henry L. Niman, PhDBird Flu Update
  19. niman
    Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1E-GiK3kfvi7q21vE1RhtxZnPqKY&ll=40.742512091644386%2C-73.94221540503236&z=18
  20. niman
    Vets Test Cats For Bird Flu At LIC Warehouse on: January 19, 2017In: News, Top News Print Email Share0 Tweet Share0 BY ARIEL HERNANDEZ Staff Writer The city’s Health Department is trying to determine what the cat dragged in after hundreds of felines were taken to a Long Island City warehouse following the discovery that they had been exposed to a strain of the avian flu. The warehouse, located on Austell Place, is temporarily sheltering the cats, which have been exposed to H7N2, a type of avian influenza that is also known as the bird flu. ASPCA personnel holds one of the felines being treated at the temporary shelter. Photo courtesy of the ASPCA The shelter was coordinated by the Health Department, Animal Care Centers of NYC (ACC) and the ASPCA (American Society for the Prevention of Cruelty to Animals), and was funded by Maddie’s Fund to provide daily care while veterinary experts closely monitor the cats during a 45- to 90-day quarantine period. “Responders from the ASPCA, ACC and other agencies are working around the clock to safely monitor and care for these cats,” said ASPCA president and CEO Matt Bershadker. As of last week, more than 450 cats from ACC shelters in Manhattan, Brooklyn and Staten Island were transported to the temporary Long Island City shelter by ACC and the Mayor’s Alliance for NYC’s Animals. Although some cats are doing well and settling in at the shelter, others are showing mild flu-like symptoms such as sneezing or runny nose. This is why the cats are being quarantined at the facility until ongoing lab tests, conducted by the Shelter Medicine Program at the University of Wisconsin School of Veterinary Medicine, determine that the animals are healthy and no longer contagious. While the virus is said to occasionally mutate and transfer to mammals, such as cats, the investigation of the H7N2 virus by the Department of Health and Mental Hygiene (DOHMH) confirmed that the risk to humans is low, given that there has only been one cat-to-human transmission—and no human-to-human transmission—associated with the outbreak. However, to ensure the safety of both the responders and cats, the ASPCA has implemented strict protocols, such as decontamination training and personal protective equipment for all the individuals who are in direct contact with the cats. “Once the cats are healthy and no longer contagious, we’ll do everything we can to help them find homes,” Bershadker said. The ASPCA and ACC encourage all New Yorkers who have adopted a cat from an ACC shelter between Nov. 12 and Dec. 15 to monitor their pets for flu-like symptoms, such as sneezing, coughing, runny nose and runny or red eyes. If these symptoms appear, owners are also encouraged to take their cats to a veterinarian and inform him/her that the cat may have been exposed to H7N2, so that he/she can make arrangements to prevent exposure of the virus to other cats in the clinic. “We continue to urge New Yorkers who have adopted cats from ACC shelters to be on alert for symptoms in their pets and take proper precautions,” city Health Commissioner Dr. Mary T. Bassett said. Reach Ariel Hernandez at (718) 357-7400 x144 or [email protected]
  21. niman
    The city’s Health Department is trying to determine what the cat dragged in after hundreds of felines were taken to a Long Island City warehouse following the discovery that they had been exposed to a strain of the avian flu. The warehouse, located on Austell Place, is temporarily sheltering the cats, which have been exposed to H7N2, a type of avian influenza that is also known as the bird flu. http://queenstribune.com/vets-test-cats-bird-flu-lic-warehouse/
  22. niman
    Kalangala locals eating suspected flu-infected birds Residents living on the shores of Lake Victoria in Kalangala District are capturing weakened migrant birds and eating them despite the Health ministry’s warning that such birds can pass the deadly birds flu onto humans. TUESDAY JANUARY 17 2017 0 Alerted. Poultry farmers are under panic after the Ministry of Health announced an outbreak of Avian flu in birds. PHOTO BY RACHEL MABALA In Summary Concern. Kalangala, Wakiso and Masaka districts have registered massive deaths of migrant birds infected by the deadly Highly Pathogenic Avian Influenza (HPAI) type H5N1. ADVERTISEMENT By Andrew Bagala, Henry Lubuulwa & Martin E Ssekweyama KAMPALA. Residents living on the shores of Lake Victoria in Kalangala District are capturing weakened migrant birds and eating them despite the Health ministry’s warning that such birds can pass the deadly birds flu onto humans. Kalangala, Wakiso and Masaka districts have registered massive deaths of migrant birds infected by the deadly Highly Pathogenic Avian Influenza (HPAI) type H5N1. It is the first time that the bird flu type H5N1 has been reported in birds in Uganda. This strain of the disease, one of three types, affects humans, animals and birds, according to UN health agency WHO. Humans contract the disease through close contact with infected poultry or with objects contaminated by their faecal matter, according to the global health agency. Incidences of island district residents eating the dead or weak birds were reported in Jaana and Buyange islands in Bubeke Sub-county, Kalangala District. Mr Samuel Mutimba, a resident in the area, said they have been trapping and catching some of the bird species that migrate to the islands for food. “These birds are part of our food. We have been eating them for ages,” Mr Mutimba said. Mr Richard Lule, a resident on Jaana Island, said he saw some of his colleagues picking up birds around the rocky island. “I have seen some of our colleagues here picking up these birds and some have told us that they are sweet,” Mr Lule said. Bubeke Sub-county is a known bird sanctuary and harbours close to 923 bird species. Most of the birds are found in Nsirwe Island, which is close to Jaana Island. Kalangala District health inspectors yesterday visited the affected areas and collected the dead and weak birds and culled them in an effort to stop the spread of the bird flu. The Kalangala District health officer, Mr Hillary Bitakaramire, said precautions and guidelines have been disseminated to health officials in Bubeke Sub-county to ensure the residents are safe. The health inspectors also held awareness meetings with the locals warning them against eating or having contact with the dead birds. Prof Anthony Mbonye, the director general for health services, yesterday warned the public against touching such birds and eating their meat suspected to have the deadly virus. “Although this is bird flu, caused by a virus, human infection can sometimes occur, and 60 per cent of the affected cases die. The H5N1 virus in humans causes typical flu-like symptoms, such as fever greater than 38 centigrade, sore throat, runny nose, headache, cough and chest pain,” Prof Mbonye said. Symptoms Prof Mbonye added that patients of bird flu have difficulty in breathing, suffer diarrhoea, and muscle aches. He said those who consume poultry products must cook them thoroughly before eating them since the virus can’t live in great heat. http://www.monitor.co.ug/News/National/Kalangala-locals-eating-suspected-flu-infected-birds/688334-3520906-it4n8h/index.html
  23. niman
    Align Segment-ID Name Score E-Value Identity EPI881900 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI869935 A/mute swan/Poland/108/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI869933 A/chicken/Poland/79A/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI869811 A/duck/France/161108h/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI873213 A/chicken/Croatia/103/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI869939 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI869934 A/chicken/Poland/85A/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI873627 A/mute swan/Croatia/104/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI873625 A/mute swan/Croatia/9/2017 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI861014 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI861010 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI860510 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI860403 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI860395 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI859655 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2544.0 0.000000e+00 1396/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1395/1406 (99%) EPI869937 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1393/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI861013 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1393/1406 (99%) EPI869932 A/domestic goose/Poland/72/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI869925 A/domestic goose/Poland/33/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI861015 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1393/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1394/1407 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1392/1406 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1392/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2497.8 0.000000e+00 1388/1406 (98%) EPI869941 A/herring gull/Poland/84/2016 (A/H5N8) segment 6 (NA) 2473.8 0.000000e+00 1359/1369 (99%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2464.6 0.000000e+00 1382/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2453.5 0.000000e+00 1380/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI873660 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 6 (NA) 2405.5 0.000000e+00 1329/1343 (98%)
  24. niman
    Align Segment-ID Name Score E-Value Identity EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3125.7 0.000000e+00 1700/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3125.7 0.000000e+00 1700/1704 (99%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3110.9 0.000000e+00 1697/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI869927 A/chicken/Poland/79A/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI869928 A/chicken/Poland/85A/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI873626 A/mute swan/Croatia/104/2016 (A/H5N8) segment 4 (HA) 3096.1 0.000000e+00 1692/1700 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI869938 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI873212 A/chicken/Croatia/103/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1691/1702 (99%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1693/1705 (99%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3077.6 0.000000e+00 1679/1686 (99%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI860509 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI860401 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI859653 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI861224 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI861012 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1687/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1688/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI861222 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 4 (HA) 3051.8 0.000000e+00 1685/1704 (98%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2976.1 0.000000e+00 1673/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2976.1 0.000000e+00 1673/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2965.0 0.000000e+00 1671/1704 (98%) EPI675774 A/duck/Liaoning/S1001/2014 (A/H5N8) segment 4 (HA) 2965.0 0.000000e+00 1671/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2953.9 0.000000e+00 1669/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%)
  25. niman
    Isolate name: A/breeder duck/Croatia/21/2017 Isolate ID: EPI_ISL_241952 Passage details/history: 0 Type: A / H5N8 Lineage: Sample information Collection date: 2017-01-14 Host Anas platyrhynchos Additional host information: Domestic status: Domestic Is vaccinated: N Location: Croatia / Zagrebacka Zupanija Additional location information: Sop Bukevski Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Croatian Veterinary Institute Sample ID given by the submitting laboratory: Authors: Savić, Vladimir Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence HA A/breeder duck/Croatia/21/2017 1736 EPI881899 NA A/breeder duck/Croatia/21/2017 1425 EPI881900 Submitter information Submitter: Savić, Vladimir Submission Date: 2017-01-19 Last modifier: Savić, Vladimir Last modified: 2017-01-19 Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia
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