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niman

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Everything posted by niman

  1. DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI641395A/chicken/Yunnan/22/2015 (A/H5N6) segment 6 (NA)2549.50.000000e+001380/1380 (100%)EPI641393A/chicken/Yunnan/19/2015 (A/H5N6) segment 6 (NA)2549.50.000000e+001380/1380 (100%)EPI641397A/chicken/Yunnan/25A/2015 (A/H5N6) segment 6 (NA)2527.30.000000e+001376/1380 (99%)EPI641400A/Yunnan/0127/2015 (A/H5N6) segment 6 (NA)2521.80.000000e+001375/1380 (99%)EPI602414A/chicken/Dongguan/2690/2013 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI601944A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI599294A/chicken/Shenzhen/552/2013 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI530056A/duck/Jiangxi/95/2014 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI602493A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 6 (NA)2494.10.000000e+001370/1380 (99%)EPI599322A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 6 (NA)2494.10.000000e+001370/1380 (99%)EPI550765A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA)2494.10.000000e+001370/1380 (99%)EPI550754A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 6 (NA)2494.10.000000e+001370/1380 (99%)EPI601070A/chicken/Jiangxi/13259/2014 (A/H0) segment 6 (NA)2488.60.000000e+001370/1381 (99%)EPI599315A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 6 (NA)2488.60.000000e+001369/1380 (99%)EPI602319A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602312A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602305A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602298A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602274A/chicken/Jiangxi/13238/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602267A/chicken/Jiangxi/13235/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602260A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602253A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602236A/chicken/Jiangxi/13264/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602229A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602222A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602208A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602201A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602155A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602048A/chicken/Dongguan/2818/2013 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601464A/chicken/Jiangxi/13211/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601453A/chicken/Jiangxi/13198/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601443A/chicken/Jiangxi/13196/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601406A/chicken/Jiangxi/13253/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601394A/chicken/Jiangxi/13237/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601342A/chicken/Jiangxi/13272/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601197A/chicken/Jiangxi/13216/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601190A/chicken/Jiangxi/13215/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601180A/chicken/Jiangxi/13212/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601171A/chicken/Jiangxi/13206/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601162A/chicken/Jiangxi/13204/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601152A/chicken/Jiangxi/13246/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601126A/chicken/Jiangxi/13228/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601117A/chicken/Jiangxi/13219/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601099A/chicken/Jiangxi/13271/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI601080A/chicken/Jiangxi/13260/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI600276A/chicken/Jiangxi/13275/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI600269A/chicken/Jiangxi/13263/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI600255A/chicken/Jiangxi/13248/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI600241A/chicken/Jiangxi/13222/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI600234A/chicken/Jiangxi/13218/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI600220A/chicken/Jiangxi/13208/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI600199A/chicken/Jiangxi/12782/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI599657A/goose/Shantou/1791/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI593183A/chicken/Jiangxi/14535/2014 (A/H7N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI593140A/chicken/Jiangxi/14510/2014 (A/H0) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI593123A/chicken/Jiangxi/14501/2014 (A/H7N6) segment 6 (NA)2483.00.000000e+001369/1381 (99%)EPI602246A/chicken/Jiangxi/13217/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI602239A/chicken/Jiangxi/13213/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI602215A/chicken/Jiangxi/13249/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI602162A/chicken/Jiangxi/13274/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI601474A/chicken/Jiangxi/13232/2014 (A/H0) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI601145A/chicken/Jiangxi/13244/2014 (A/H0) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI601135A/chicken/Jiangxi/13233/2014 (A/H0) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI601088A/chicken/Jiangxi/13262/2014 (A/H0) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI600248A/chicken/Jiangxi/13242/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI600227A/chicken/Jiangxi/13214/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI600213A/chicken/Jiangxi/13202/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI600192A/chicken/Jiangxi/12272/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI599650A/goose/Shantou/1763/2014 (A/H5N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI599329A/duck/Dongguan/2685/2013 (A/H5N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI599301A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI592609A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI602194A/chicken/Jiangxi/13240/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001367/1381 (98%)EPI602190A/chicken/Jiangxi/14512/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001367/1381 (98%)EPI601242A/chicken/Jiangxi/13203/2014 (A/H0) segment 6 (NA)2471.90.000000e+001367/1381 (98%)EPI600262A/chicken/Jiangxi/13256/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001367/1381 (98%)EPI600206A/chicken/Jiangxi/13200/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001367/1381 (98%)EPI599664A/goose/Shantou/1806/2014 (A/H5N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI599341A/duck/Dongguan/3069/2013 (A/H5N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI599335A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI602479A/chicken/Shenzhen/715/2013 (A/H5N6) segment 6 (NA)2466.40.000000e+001365/1380 (98%)EPI599287A/chicken/Shenzhen/433/2013 (A/H5N6) segment 6 (NA)2466.40.000000e+001365/1380 (98%)EPI531458A/duck/Guangdong/GD01/2014 (A/H5N6) segment 6 (NA)2466.40.000000e+001365/1380 (98%)EPI602421A/chicken/Dongguan/3363/2013 (A/H5N6) segment 6 (NA)2460.90.000000e+001365/1381 (98%)EPI602032A/chicken/Dongguan/4190/2013 (A/H0) segment 6 (NA)2460.90.000000e+001365/1381 (98%)EPI602019A/chicken/Shenzhen/2072/2013 (A/H0) segment 6 (NA)2460.90.000000e+001365/1381 (98%)EPI599348A/chicken/Dongguan/4259/2013 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596624A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596618A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596612A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596606A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596600A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596594A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596588A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596576A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI530065A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 6 (NA)2460.90.000000e+001364/1380 (98%)EPI596582A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 6 (NA)2457.20.000000e+001363/1380 (98%)EPI602486A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 6 (NA)2455.30.000000e+001363/1380 (98%)EPI601415A/chicken/Jiangxi/13257/2014 (A/H0) segment 6 (NA)2455.30.000000e+001364/1381 (98%)EPI681352A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 6 (NA)2449.80.000000e+001362/1380 (98%)EPI645044A/swine/Guangdong/2/2014 (A/H5N6) segment 6 (NA)2449.80.000000e+001362/1380 (98%)EPI645037A/swine/Guangdong/1/2014 (A/H5N6) segment 6 (NA)2449.80.000000e+001362/1380 (98%)EPI681353A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 6 (NA)2444.20.000000e+001361/1380 (98%)EPI681344A/goose/Zhejiang/727092/2014 (A/H5N6) segment 6 (NA)2438.70.000000e+001360/1380 (98%)EPI681343A/duck/Zhejiang/727158/2014 (A/H5N6) segment 6 (NA)2438.70.000000e+001360/1380 (98%)EPI593898A/duck/Guangzhou/41227/2014 (A/H5N6) segment 6 (NA)2438.70.000000e+001361/1381 (98%)EPI681354A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 6 (NA)2433.20.000000e+001359/1380 (98%)EPI681346A/goose/Zhejiang/925036/2014 (A/H5N6) segment 6 (NA)2433.20.000000e+001359/1380 (98%)EPI590815A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 6 (NA)2433.20.000000e+001359/1380 (98%)EPI590808A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 6 (NA)2433.20.000000e+001359/1380 (98%)EPI683020A/duck/Wuhan/JXYFB22/2015 (A/H5N6) segment 6 (NA)2427.60.000000e+001358/1380 (98%)EPI683016A/chicken/Wuhan/WHYJ02/2015 (A/H5N6) segment 6 (NA)2427.60.000000e+001358/1380 (98%)EPI683015A/chicken/Wuhan/WHYJ01/2015 (A/H5N6) segment 6 (NA)2427.60.000000e+001358/1380 (98%)EPI615107A/duck/Guangxi/175D12/2014 (A/H3N6) segment 6 (NA)2427.60.000000e+001358/1380 (98%)EPI683018A/duck/Wuhan/WHYF03/2015 (A/H5N6) segment 6 (NA)2416.50.000000e+001356/1380 (98%)EPI683017A/duck/Wuhan/WHYF02/2015 (A/H5N6) segment 6 (NA)2416.50.000000e+001356/1380 (98%)EPI683011A/turtledove/Wuhan/WHBJ12/2014 (A/H5N6) segment 6 (NA)2416.50.000000e+001356/1380 (98%)EPI683014A/turtledove/Wuhan/HKBJ43/2015 (A/H5N6) segment 6 (NA)2411.00.000000e+001355/1380 (98%)EPI683013A/turtledove/Wuhan/HKBJ27/2015 (A/H5N6) segment 6 (NA)2411.00.000000e+001355/1380 (98%)EPI683012A/turtledove/Wuhan/WHBJ28/2014 (A/H5N6) segment 6 (NA)2411.00.000000e+001355/1380 (98%)EPI683009A/turtledove/Wuhan/WHBJ26/2014 (A/H5N6) segment 6 (NA)2411.00.000000e+001355/1380 (98%)EPI681348A/goose/Zhejiang/925106/2014 (A/H5N6) segment 6 (NA)2411.00.000000e+001355/1380 (98%)EPI593891A/Guangzhou/39715/2014 (A/H5N6) segment 6 (NA)2411.00.000000e+001355/1380 (98%)EPI683010A/turtledove/Wuhan/HKBJ07/2015 (A/H5N6) segment 6 (NA)2409.20.000000e+001354/1380 (98%)EPI681345A/goose/Zhejiang/727110/2014 (A/H5N6) segment 6 (NA)2377.80.000000e+001350/1381 (97%)EPI314283A/swine/Guangdong/K6/2010 (A/H6N6) segment 6 (NA)2361.10.000000e+001346/1380 (97%)EPI500957A/Duck/Guangdong/S1419/2011 (A/H6N6) segment 6 (NA)2344.50.000000e+001343/1380 (97%)EPI602040A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA)2283.60.000000e+001332/1380 (96%)EPI501037A/Duck/Guangdong/S4251/2010 (A/H6N6) segment 6 (NA)2267.00.000000e+001330/1381 (96%)EPI364045A/duck/Shantou/1984/2007 (A/H6N6) segment 6 (NA)2250.30.000000e+001327/1381 (96%)EPI550758A/duck/Laos/LPQ002/2014 (A/H5N6) segment 6 (NA)2228.20.000000e+001220/1227 (99%)EPI550760A/chicken/Laos/XBY003/2014 (A/H5N6) segment 6 (NA)2198.60.000000e+001200/1205 (99%)EPI364271A/duck/Shantou/12958/2006 (A/H6N6) segment 6 (NA)2191.20.000000e+001318/1382 (95%)EPI268291A/duck/Fujian/11661/2005 (A/H6N6) segment 6 (NA)2145.10.000000e+001311/1384 (94%)EPI363773A/duck/Fujian/958/2006 (A/H6N6) segment 6 (NA)2139.50.000000e+001310/1384 (94%)EPI550769A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA)2119.20.000000e+001155/1159 (99%)EPI268294A/mallard/Shantou/972/2005 (A/H6N6) segment 6 (NA)1956.70.000000e+001161/1211 (95%)EPI268297A/duck/Shantou/6233/2004 (A/H6N6) segment 6 (NA)1940.10.000000e+001158/1211 (95%)EPI364732A/duck/Shantou/9350/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001158/1213 (95%)EPI364554A/duck/Shantou/2798/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001158/1213 (95%)EPI364227A/duck/Shantou/3389/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001158/1213 (95%)EPI268292A/duck/Shantou/11392/2005 (A/H6N6) segment 6 (NA)1929.00.000000e+001156/1211 (95%)EPI364728A/duck/Shantou/7429/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364331A/duck/Shantou/19616/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364303A/duck/Shantou/16158/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364301A/duck/Shantou/16124/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364287A/duck/Shantou/14877/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364277A/duck/Shantou/13655/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364267A/duck/Shantou/11228/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364265A/duck/Shantou/11034/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364256A/duck/Shantou/9702/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364254A/duck/Shantou/9374/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI363681A/duck/Shantou/14841/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI268293A/duck/Shantou/8365/2005 (A/H6N6) segment 6 (NA)1923.50.000000e+001155/1211 (95%)EPI364861A/duck/Shantou/18088/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001157/1214 (95%)EPI364804A/duck/Shantou/15048/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364784A/duck/Shantou/14531/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364770A/duck/Shantou/10143/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364299A/duck/Shantou/15940/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001157/1214 (95%)EPI364263A/duck/Shantou/10284/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364244A/duck/Shantou/5697/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI268289A/goose/Shantou/18647/2005 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI365031A/duck/Fujian/1641/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001154/1211 (95%)EPI364444A/duck/Fujian/3046/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001154/1211 (95%)EPI364339A/duck/Fujian/2292/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001154/1211 (95%)EPI364273A/duck/Shantou/13252/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001152/1208 (95%)EPI363837A/duck/Fujian/6708/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001154/1211 (95%)EPI364810A/duck/Shantou/16147/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364634A/duck/Shantou/5051/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364626A/duck/Shantou/5041/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364297A/duck/Shantou/15798/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI364283A/duck/Shantou/14607/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI364279A/duck/Shantou/14163/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI364235A/duck/Shantou/4414/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI363593A/duck/Shantou/1165/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI268288A/duck/Shantou/20313/2005 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI365123A/duck/Fujian/2087/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI365058A/duck/Fujian/2606/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI364530A/duck/Fujian/6860/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001154/1212 (95%)EPI364450A/duck/Fujian/6222/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI364448A/duck/Fujian/4008/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI364337A/duck/Fujian/1904/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI363829A/duck/Fujian/5498/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI268299A/wild duck/Shantou/192/2004 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI268290A/duck/Fujian/12035/2005 (A/H6N6) segment 6 (NA)1912.40.000000e+001153/1211 (95%)EPI364844A/duck/Shantou/17036/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364812A/duck/Shantou/16144/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364586A/duck/Shantou/4129/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001155/1214 (95%)EPI364293A/duck/Shantou/15479/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364289A/duck/Shantou/15037/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364281A/duck/Shantou/14565/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364239A/duck/Shantou/4980/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001155/1214 (95%)EPI364237A/duck/Shantou/4938/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364037A/duck/Shantou/1240/2007 (A/H6N6) segment 6 (NA)1908.70.000000e+001155/1214 (95%)EPI363601A/wild duck/Shantou/2441/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI365155A/duck/Fujian/2749/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI365131A/duck/Fujian/2278/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI365115A/duck/Fujian/1879/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI365107A/duck/Fujian/912/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI365103A/duck/Fujian/816/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI365095A/duck/Fujian/402/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI365074A/duck/Fujian/6955/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001152/1211 (95%)EPI365066A/duck/Fujian/6605/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001152/1211 (95%)EPI365050A/duck/Fujian/2281/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI365042A/duck/Fujian/1674/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001152/1211 (95%)EPI364497A/duck/Fujian/2582/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI364494A/duck/Fujian/1772/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI364492A/duck/Fujian/1600/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI364480A/duck/Fujian/576/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI364474A/duck/Fujian/118/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI364470A/duck/Fujian/10706/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI364460A/duck/Fujian/7830/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001152/1211 (95%)EPI364458A/duck/Fujian/7652/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI364446A/duck/Fujian/3574/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001152/1211 (95%)EPI364076A/duck/Fujian/1565/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001153/1212 (95%)EPI363805A/duck/Fujian/3354/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001152/1211 (95%)EPI363781A/duck/Fujian/1651/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001152/1211 (95%)EPI364092A/duck/Fujian/2018/2007 (A/H6N6) segment 6 (NA)1905.00.000000e+001152/1211 (95%)EPI363797A/duck/Fujian/2854/2006 (A/H6N6) segment 6 (NA)1905.00.000000e+001151/1210 (95%)EPI364870A/duck/Shantou/18729/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI364852A/duck/Shantou/17081/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI364329A/duck/Shantou/19369/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI364317A/duck/Shantou/18070/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI364315A/duck/Shantou/17800/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI364309A/duck/Shantou/16810/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI364305A/duck/Shantou/16440/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI364013A/duck/Shantou/358/2007 (A/H6N6) segment 6 (NA)1903.20.000000e+001153/1213 (95%)EPI363757A/duck/Shantou/19597/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI363689A/duck/Shantou/17058/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001154/1214 (95%)EPI363633A/duck/Shantou/4636/2006 (A/H6N6) segment 6 (NA)1903.20.000000e+001153/1213 (95%)EPI365139A/duck/Fujian/2356/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI365088A/duck/Fujian/145/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364532A/duck/Fujian/6908/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364514A/duck/Fujian/4185/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364512A/duck/Fujian/3756/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364510A/duck/Fujian/3460/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364490A/duck/Fujian/1322/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364468A/duck/Fujian/9308/2006 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364464A/duck/Fujian/8388/2006 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364462A/duck/Fujian/8114/2006 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364454A/duck/Fujian/6908/2006 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364335A/duck/Fujian/1348/2006 (A/H6N6) segment 6 (NA)1901.30.000000e+001151/1211 (95%)EPI364117A/duck/Fujian/3264/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364060A/duck/Fujian/378/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI363877A/duck/Fujian/11418/2006 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI363853A/duck/Fujian/9062/2006 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI363739A/duck/Fujian/2787/2007 (A/H6N6) segment 6 (NA)1901.30.000000e+001152/1212 (95%)EPI364325A/duck/Shantou/19097/2006 (A/H6N6) segment 6 (NA)1897.60.000000e+001152/1213 (94%)EPI364323A/duck/Shantou/18765/2006 (A/H6N6) segment 6 (NA)1897.60.000000e+001152/1213 (94%)EPI364321A/duck/Shantou/18709/2006 (A/H6N6) segment 6 (NA)1897.60.000000e+001153/1214 (94%)
  2. DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI641392A/chicken/Yunnan/19/2015 (A/H5N6) segment 4 (HA)3142.30.000000e+001701/1701 (100%)EPI641394A/chicken/Yunnan/22/2015 (A/H5N6) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI641398A/Yunnan/0127/2015 (A/H5N6) segment 4 (HA)3009.30.000000e+001678/1702 (98%)EPI641396A/chicken/Yunnan/25A/2015 (A/H5N6) segment 4 (HA)3009.30.000000e+001678/1702 (98%)EPI550768A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA)2950.20.000000e+001670/1705 (97%)EPI550763A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA)2950.20.000000e+001670/1705 (97%)EPI550759A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA)2950.20.000000e+001670/1705 (97%)EPI550757A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA)2950.20.000000e+001670/1705 (97%)EPI550752A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 4 (HA)2944.70.000000e+001669/1705 (97%)EPI602412A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA)2928.10.000000e+001665/1704 (97%)EPI602045A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA)2928.10.000000e+001665/1704 (97%)EPI599662A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA)2922.50.000000e+001665/1705 (97%)EPI599655A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA)2922.50.000000e+001665/1705 (97%)EPI599648A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA)2922.50.000000e+001665/1705 (97%)EPI530054A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA)2922.50.000000e+001664/1704 (97%)EPI681296A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA)2917.00.000000e+001663/1704 (97%)EPI602419A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA)2917.00.000000e+001663/1704 (97%)EPI599292A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA)2917.00.000000e+001663/1704 (97%)EPI602028A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA)2913.30.000000e+001662/1704 (97%)EPI681295A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI681294A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI681284A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI681283A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI599339A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI599320A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI599313A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI599299A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA)2911.40.000000e+001662/1704 (97%)EPI681287A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA)2905.90.000000e+001661/1704 (97%)EPI602491A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA)2905.90.000000e+001661/1704 (97%)EPI601941A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA)2905.90.000000e+001661/1704 (97%)EPI599346A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA)2905.90.000000e+001661/1704 (97%)EPI599333A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA)2905.90.000000e+001661/1704 (97%)EPI599327A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA)2905.90.000000e+001661/1704 (97%)EPI531456A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA)2905.90.000000e+001661/1704 (97%)EPI681285A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA)2900.40.000000e+001660/1704 (97%)EPI602477A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA)2900.40.000000e+001660/1704 (97%)EPI599285A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA)2900.40.000000e+001660/1704 (97%)EPI645049A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA)2898.50.000000e+001659/1703 (97%)EPI681286A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA)2894.80.000000e+001659/1704 (97%)EPI681279A/duck/Zhejiang/727041/2014 (A/H5N2) segment 4 (HA)2894.80.000000e+001659/1704 (97%)EPI602103A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA)2894.80.000000e+001659/1704 (97%)EPI593889A/Guangzhou/39715/2014 (A/H5N6) segment 4 (HA)2894.80.000000e+001659/1704 (97%)EPI590813A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 4 (HA)2894.80.000000e+001659/1704 (97%)EPI530063A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA)2894.80.000000e+001659/1704 (97%)EPI645042A/swine/Guangdong/2/2014 (A/H5N6) segment 4 (HA)2893.00.000000e+001658/1703 (97%)EPI590806A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 4 (HA)2889.30.000000e+001658/1704 (97%)EPI596610A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 4 (HA)2885.60.000000e+001657/1704 (97%)EPI596598A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 4 (HA)2883.70.000000e+001657/1704 (97%)EPI596592A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 4 (HA)2883.70.000000e+001657/1704 (97%)EPI596586A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 4 (HA)2883.70.000000e+001657/1704 (97%)EPI596580A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 4 (HA)2883.70.000000e+001657/1704 (97%)EPI596574A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 4 (HA)2883.70.000000e+001657/1704 (97%)EPI593896A/duck/Guangzhou/41227/2014 (A/H5N6) segment 4 (HA)2883.70.000000e+001657/1704 (97%)EPI596622A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 4 (HA)2878.20.000000e+001656/1704 (97%)EPI596616A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 4 (HA)2878.20.000000e+001656/1704 (97%)EPI596604A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 4 (HA)2878.20.000000e+001656/1704 (97%)EPI586256A/Little egret/Vietnam/WBT210/2014 (A/H5N6) segment 4 (HA)2878.20.000000e+001656/1704 (97%)EPI586255A/Black-crowned night heron/Vietnam/WBT198/2014 (A/H5N6) segment 4 (HA)2878.20.000000e+001656/1704 (97%)EPI586254A/Spotted dove/Vietnam/WBT191/2014 (A/H5N6) segment 4 (HA)2878.20.000000e+001656/1704 (97%)EPI602484A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA)2872.70.000000e+001655/1704 (97%)EPI586258A/Chinese pond heron/Vietnam/WBT231/2014 (A/H5N6) segment 4 (HA)2872.70.000000e+001655/1704 (97%)EPI682912A/duck/Wuhan/WHYF03/2015 (A/H5N6) segment 4 (HA)2861.60.000000e+001653/1704 (97%)EPI682911A/duck/Wuhan/WHYF02/2015 (A/H5N6) segment 4 (HA)2861.60.000000e+001653/1704 (97%)EPI676398A/environment/GZ/76/2014 (A/H5N2) segment 4 (HA)2861.60.000000e+001654/1705 (97%)EPI682939A/turtledove/Wuhan/HKBJ07/2015 (A/H5N6) segment 4 (HA)2856.00.000000e+001653/1705 (96%)EPI682938A/turtledove/Wuhan/WHBJ26/2014 (A/H5N6) segment 4 (HA)2856.00.000000e+001653/1705 (96%)EPI682937A/turtledove/Wuhan/HKBJ43/2015 (A/H5N6) segment 4 (HA)2856.00.000000e+001653/1705 (96%)EPI682936A/turtledove/Wuhan/HKBJ27/2015 (A/H5N6) segment 4 (HA)2856.00.000000e+001653/1705 (96%)EPI682935A/turtledove/Wuhan/WHBJ28/2014 (A/H5N6) segment 4 (HA)2856.00.000000e+001653/1705 (96%)EPI681288A/goose/Zhejiang/925036/2014 (A/H5N6) segment 4 (HA)2856.00.000000e+001652/1704 (96%)EPI586257A/Common moorhen/Vietnam/WBT226/2014 (A/H5N6) segment 4 (HA)2856.00.000000e+001652/1704 (96%)EPI682934A/turtledove/Wuhan/WHBJ12/2014 (A/H5N6) segment 4 (HA)2850.50.000000e+001652/1705 (96%)EPI682914A/chicken/Wuhan/WHYJ02/2015 (A/H5N6) segment 4 (HA)2850.50.000000e+001651/1704 (96%)EPI682913A/chicken/Wuhan/WHYJ01/2015 (A/H5N6) segment 4 (HA)2850.50.000000e+001651/1704 (96%)EPI590898A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 4 (HA)2800.60.000000e+001642/1704 (96%)EPI590897A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 4 (HA)2800.60.000000e+001642/1704 (96%)EPI593747A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA)2795.10.000000e+001644/1707 (96%)EPI442017A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA)2795.10.000000e+001644/1707 (96%)EPI398966A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA)2795.10.000000e+001643/1706 (96%)EPI676397A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA)2789.60.000000e+001643/1707 (96%)EPI590896A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 4 (HA)2789.60.000000e+001641/1705 (96%)EPI475579A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA)2789.60.000000e+001643/1707 (96%)EPI590116A/chicken/Tonghai/802/2014 (A/H5N1) segment 4 (HA)2784.00.000000e+001639/1704 (96%)EPI590115A/chicken/Tonghai/5/2014 (A/H5N1) segment 4 (HA)2784.00.000000e+001639/1704 (96%)EPI590114A/chicken/Tonghai/3/2014 (A/H5N1) segment 4 (HA)2784.00.000000e+001639/1704 (96%)EPI590109A/chicken/AnNing/1/2014 (A/H5N1) segment 4 (HA)2784.00.000000e+001639/1704 (96%)EPI585951A/chicken/TongHai/302/2014 (A/H5N1) segment 4 (HA)2784.00.000000e+001639/1704 (96%)EPI398965A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA)2778.50.000000e+001641/1707 (96%)EPI682917A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA)2772.90.000000e+001639/1706 (96%)EPI682916A/duck/Wuhan/JXYFB22/2015 (A/H5N6) segment 4 (HA)2772.90.000000e+001637/1704 (96%)EPI590111A/chicken/AnNing/6/2014 (A/H5N1) segment 4 (HA)2772.90.000000e+001638/1705 (96%)EPI431456A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA)2772.90.000000e+001640/1707 (96%)EPI590110A/chicken/AnNing/4/2014 (A/H5N1) segment 4 (HA)2767.40.000000e+001636/1704 (96%)EPI591879A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA)2756.30.000000e+001637/1707 (95%)EPI431448A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA)2752.60.000000e+001637/1708 (95%)EPI509698A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA)2750.80.000000e+001636/1707 (95%)EPI399960A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA)2750.80.000000e+001637/1708 (95%)EPI590113A/chicken/DaLi/502/2014 (A/H5N1) segment 4 (HA)2745.20.000000e+001633/1705 (95%)EPI590112A/chicken/DaLi/302/2014 (A/H5N1) segment 4 (HA)2745.20.000000e+001633/1705 (95%)EPI544892A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA)2745.20.000000e+001635/1707 (95%)EPI681300A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA)2739.70.000000e+001634/1707 (95%)EPI681299A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA)2739.70.000000e+001634/1707 (95%)EPI672795A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA)2739.70.000000e+001634/1707 (95%)EPI672787A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA)2739.70.000000e+001634/1707 (95%)EPI561495A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA)2739.70.000000e+001634/1707 (95%)EPI493825A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA)2734.20.000000e+001636/1710 (95%)EPI602037A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA)2728.60.000000e+001632/1707 (95%)EPI583870A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA)2728.60.000000e+001632/1707 (95%)EPI681280A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA)2724.90.000000e+001630/1705 (95%)EPI602094A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA)2723.10.000000e+001632/1708 (95%)EPI530986A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA)2723.10.000000e+001631/1707 (95%)EPI681290A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA)2717.50.000000e+001630/1707 (95%)EPI530985A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA)2717.50.000000e+001630/1707 (95%)EPI682915A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA)2712.00.000000e+001629/1707 (95%)EPI681298A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA)2712.00.000000e+001629/1707 (95%)EPI602113A/environment/Jiangxi/10170/2014 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI601997A/black chicken/Jiangxi/10139/2014 (A/H0) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI599369A/environment/Jiangxi/10171/2014 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI599360A/environment/Jiangxi/10164/2014 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI599353A/duck/Jiangxi/10160/2014 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI585724A/cat/Sichuan/SC18/2014 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI569711A/duck/Zhejiang/6D2/2013 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI569710A/chicken/Zhejiang/6C2/2013 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI533583A/Sichuan/26221/2014 (A/H5N6) segment 4 (HA)2712.00.000000e+001630/1708 (95%)EPI507673A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA)2712.00.000000e+001629/1707 (95%)EPI499478A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA)2712.00.000000e+001629/1707 (95%)EPI493817A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA)2712.00.000000e+001634/1712 (95%)EPI602107A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI601986A/black chicken/Jiangxi/10136/2014 (A/H0) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI601977A/black chicken/Jiangxi/10131/2014 (A/H0) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI599306A/chicken/Shenzhen/1845/2013 (A/H5N6) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI590894A/duck/Sichuan/NCXJ24/2014 (A/H5N6) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI590893A/duck/Sichuan/NCXJ16/2014 (A/H5N6) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI590890A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI547402A/environment/Zhenjiang/C13/2013 (A/H5N6) segment 4 (HA)2706.50.000000e+001629/1708 (95%)EPI602056A/chicken/Jiangxi/10122/2014 (A/H0) segment 4 (HA)2702.80.000000e+001628/1708 (95%)EPI681297A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA)2700.90.000000e+001627/1707 (95%)EPI681281A/goose/Zhejiang/77167/2014 (A/H5N2) segment 4 (HA)2695.40.000000e+001627/1708 (95%)EPI681282A/goose/Zhejiang/77168/2014 (A/H5N2) segment 4 (HA)2689.80.000000e+001626/1708 (95%)EPI681278A/duck/Zhejiang/77138/2014 (A/H5N2) segment 4 (HA)2689.80.000000e+001626/1708 (95%)EPI676399A/environment/GZ/77/2014 (A/H5N6) segment 4 (HA)2689.80.000000e+001627/1709 (95%)EPI573197A/chicken/Korea/H881/2014 (A/H5N8) segment 4 (HA)2689.80.000000e+001627/1709 (95%)EPI561612A/breeder duck/Korea/H158/2014 (A/H5N8) segment 4 (HA)2689.80.000000e+001627/1709 (95%)EPI590892A/duck/Sichuan/NCXJ15/2014 (A/H5N6) segment 4 (HA)2684.30.000000e+001625/1708 (95%)EPI590891A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 4 (HA)2684.30.000000e+001625/1708 (95%)EPI585731A/swan goose/Jilin/JL01/2014 (A/H5N6) segment 4 (HA)2684.30.000000e+001625/1708 (95%)EPI585595A/baikal teal/Korea/2417/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI585589A/baikal teal/Korea/2399/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI585586A/baikal teal/Korea/1456/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI573242A/Common Teal/Korea/H844/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI561646A/breeder duck/Korea/H249/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI561626A/mallard/Korea/H207/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI561605A/broiler duck/Korea/H145/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI561591A/breeder duck/Korea/H128/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI561529A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI561508A/bean goose/Korea/H53/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI561341A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 4 (HA)2684.30.000000e+001626/1709 (95%)EPI602181A/duck/Jiangxi/13484/2014 (A/H5N6) segment 4 (HA)2678.80.000000e+001624/1708 (95%)EPI602167A/duck/Jiangxi/13469/2014 (A/H5N6) segment 4 (HA)2678.80.000000e+001624/1708 (95%)EPI590895A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 4 (HA)2678.80.000000e+001624/1708 (95%)EPI590889A/Anas_crecca/Hubei/Chenhu1623-5/2014 (A/H5N6) segment 4 (HA)2678.80.000000e+001624/1708 (95%)EPI585594A/baikal teal/Korea/2416/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI585592A/baikal teal/Korea/2406/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI585591A/baikal teal/Korea/2403/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI585590A/baikal teal/Korea/2402/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI585582A/baikal teal/Korea/1448/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI585581A/baikal teal/Korea/1447/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001626/1710 (95%)EPI585579A/baikal teal/Korea/1445/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI585577A/baikal teal/Korea/1437/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI573200A/Korean native chicken/Korea/H1139/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI573199A/breeder chicken/Korea/H1068/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001626/1710 (95%)EPI561674A/bean goose/Korea/H328/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI561577A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI561570A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI561563A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI561542A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI561522A/broiler duck/Korea/H65/2014 (A/H5N8) segment 4 (HA)2678.80.000000e+001625/1709 (95%)EPI328878A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA)2678.80.000000e+001627/1711 (95%)EPI681293A/goose/Zhejiang/1120132/2014 (A/H5N6) segment 4 (HA)2673.20.000000e+001623/1708 (95%)EPI602174A/duck/Jiangxi/13475/2014 (A/H5N6) segment 4 (HA)2673.20.000000e+001623/1708 (95%)EPI585593A/baikal teal/Korea/2414/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI585587A/baikal teal/Korea/1457/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI585584A/baikal teal/Korea/1452/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI585583A/baikal teal/Korea/1449/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI573192A/breeder chicken/Korea/H503/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI561705A/bean goose/Korea/H40/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI561667A/mallard/Korea/H297/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI561653A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI561633A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI509709A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI509704A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 4 (HA)2673.20.000000e+001624/1709 (95%)EPI585585A/baikal teal/Korea/1454/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI585580A/baikal teal/Korea/1446/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI585578A/baikal teal/Korea/1441/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI585379A/duck/Vietnam/1144/2014 (A/H5N6) segment 4 (HA)2667.70.000000e+001622/1708 (94%)EPI585378A/duck/Vietnam/1434/2014 (A/H5N6) segment 4 (HA)2667.70.000000e+001622/1708 (94%)EPI585376A/duck/Vietnam/1507/2014 (A/H5N6) segment 4 (HA)2667.70.000000e+001622/1708 (94%)EPI585374A/duck/Vietnam/1152/2014 (A/H5N6) segment 4 (HA)2667.70.000000e+001622/1708 (94%)EPI573208A/gadwall/Korea/H1351/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001624/1710 (94%)EPI573196A/broiler duck/Korea/H651/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI573194A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561697A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561681A/tundra swan/Korea/H411/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561660A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561598A/broiler duck/Korea/H133/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561515A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561360A/broiler duck/Korea/H49/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561348A/broiler duck/Korea/H47/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561336A/broiler duck/Korea/H48/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561204A/broiler duck/Korea/H31/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561196A/broiler duck/Korea/H29/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI561187A/waterfowl/Korea/S005/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI517161A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 4 (HA)2667.70.000000e+001623/1709 (94%)EPI681292A/goose/Zhejiang/112080/2014 (A/H5N6) segment 4 (HA)2662.10.000000e+001622/1709 (94%)EPI681289A/goose/Zhejiang/925105/2014 (A/H5N6) segment 4 (HA)2662.10.000000e+001622/1709 (94%)EPI585588A/baikal teal/Korea/1458/2014 (A/H5N8) segment 4 (HA)2662.10.000000e+001622/1709 (94%)EPI585377A/duck/Vietnam/1511/2014 (A/H5N6) segment 4 (HA)2662.10.000000e+001621/1708 (94%)EPI573207A/chicken/Korea/H1350/2014 (A/H5N8) segment 4 (HA)2662.10.000000e+001622/1709 (94%)EPI573201A/chicken/Korea/H1236/2014 (A/H5N8) segment 4 (HA)2662.10.000000e+001622/1709 (94%)EPI561690A/common teal/Korea/H455-30/2014 (A/H5N8) segment 4 (HA)2662.10.000000e+001622/1709 (94%)EPI561556A/Coot/Korea/H81/2014 (A/H5N8) segment 4 (HA)2662.10.000000e+001623/1710 (94%)EPI561549A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 4 (HA)2662.10.000000e+001623/1710 (94%)EPI542628A/mallard/Korea/W452/2014 (A/H5N8) segment 4 (HA)2662.10.000000e+001622/1709 (94%)EPI493833A/duck/Guangdong/wy24/2008 (A/H5N5) segment 4 (HA)2660.30.000000e+001626/1714 (94%)EPI676400A/environment/GZ/NIOSH-187/2014 (A/H5N6) segment 4 (HA)2656.60.000000e+001620/1708 (94%)EPI589841A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 4 (HA)2656.60.000000e+001620/1708 (94%)EPI589366A/muscovy duck/Quang Ninh/4c111/2013 (A/H5N6) segment 4 (HA)2656.60.000000e+001620/1708 (94%)EPI573240A/breeder duck/Korea/H345/2014 (A/H5N8) segment 4 (HA)2656.60.000000e+001621/1709 (94%)EPI573203A/chicken/Korea/H1292/2014 (A/H5N8) segment 4 (HA)2656.60.000000e+001622/1710 (94%)EPI573202A/chicken/Korea/H1268/2014 (A/H5N8) segment 4 (HA)2656.60.000000e+001621/1709 (94%)EPI573195A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)2656.60.000000e+001621/1709 (94%)EPI585389A/duck/Vietnam/1151/2014 (A/H5N6) segment 4 (HA)2652.90.000000e+001614/1700 (94%)EPI681291A/goose/Zhejiang/925108/2014 (A/H5N6) segment 4 (HA)2651.10.000000e+001620/1709 (94%)EPI589373A/muscovy duck/Quang Ninh/5c112/2013 (A/H5N6) segment 4 (HA)2651.10.000000e+001619/1708 (94%)EPI561619A/breeder duck/Korea/H200/2014 (A/H5N8) segment 4 (HA)2651.10.000000e+001620/1709 (94%)EPI573241A/breeder duck/Korea/H566/2014 (A/H5N8) segment 4 (HA)2645.50.000000e+001619/1709 (94%)EPI573205A/Korean native chicken/Korea/H1299/2014 (A/H5N8) segment 4 (HA)2645.50.000000e+001619/1709 (94%)EPI573204A/goose/Korea/H1296/2014 (A/H5N8) segment 4 (HA)2645.50.000000e+001619/1709 (94%)EPI328870A/duck/Eastern China/008/2008 (A/H5N5) segment 4 (HA)2645.50.000000e+001621/1711 (94%)EPI593753A/goose/Yangzhou/ZG62/2011 (A/H5N5) segment 4 (HA)2640.00.000000e+001620/1711 (94%)EPI573198A/broiler duck/Korea/H959/2014 (A/H5N8) segment 4 (HA)2640.00.000000e+001618/1709 (94%)EPI328886A/duck/Eastern China/108/2008 (A/H5N1) segment 4 (HA)2640.00.000000e+001620/1711 (94%)EPI573218A/Korean native chicken/Korea/H1687/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI573217A/broiler duck/Korea/H1685/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI573216A/broiler duck/Korea/H1683/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI573212A/Korean native chicken/Korea/H1554/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001618/1710 (94%)EPI573211A/goose/Korea/H1545/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001618/1710 (94%)EPI573210A/broiler duck/Korea/H1414/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI573209A/broiler duck/Korea/H1413/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI573206A/breeder duck/Korea/H1343/2014 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI550849A/duck/England/36226/14 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI550848A/duck/England/36038/14 (A/H5N8) segment 4 (HA)2634.40.000000e+001617/1709 (94%)EPI442025A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 4 (HA)2632.60.000000e+001621/1714 (94%)EPI595055A/common teal/Korea/KU-12/2015 (A/H5N8) segment 4 (HA)2628.90.000000e+001617/1710 (94%)EPI588968A/chicken/Taiwan/a174/2015 (A/H5N3) segment 4 (HA)2628.90.000000e+001618/1711 (94%)EPI573638A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 4 (HA)2628.90.000000e+001618/1711 (94%)EPI573219A/goose/Korea/H1689/2014 (A/H5N8) segment 4 (HA)2628.90.000000e+001616/1709 (94%)EPI573213A/broiler duck/Korea/H1556/2014 (A/H5N8) segment 4 (HA)2628.90.000000e+001617/1710 (94%)EPI553349A/wigeon/Sakha/1/2014 (A/H5N8) segment 4 (HA)2628.90.000000e+001616/1709 (94%)EPI576384A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 4 (HA)2625.20.000000e+001615/1709 (94%)EPI662744A/chicken/Wisconsin/15-012160-1/2015 (A/H5N2) segment 4 (HA)2623.40.000000e+001616/1710 (94%)EPI662723A/turkey/South Dakota/15-010371/2015 (A/H5N2) segment 4 (HA)2623.40.000000e+001616/1710 (94%)EPI662688A/turkey/North Dakota/15-011420-13/2015 (A/H5N2) segment 4 (HA)2623.40.000000e+001616/1710 (94%)EPI595066A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 4 (HA)2623.40.000000e+001616/1710 (94%)EPI590740A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 4 (HA)2623.40.000000e+001616/1710 (94%)EPI576391A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 4 (HA)2623.40.000000e+001615/1709 (94%)EPI573235A/Korean native chicken/Korea/H1903/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001613/1707 (94%)EPI573228A/broiler duck/Korea/H1755/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001613/1707 (94%)EPI573227A/breeder duck/Korea/H1752/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001613/1707 (94%)EPI573222A/broiler duck/Korea/H1733/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001613/1707 (94%)EPI573220A/goose/Korea/H1698/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001615/1709 (94%)EPI573215A/breeder duck/Korea/H1596/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001615/1709 (94%)EPI573214A/broiler duck/Korea/H1582/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001615/1709 (94%)EPI573179A/duck/Netherlands/14015898/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001615/1709 (94%)EPI553343A/chicken/Miyazaki/7/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001616/1710 (94%)EPI548493A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001615/1709 (94%)EPI548485A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 4 (HA)2623.40.000000e+001615/1709 (94%)EPI547673A/duck/England/36254/14 (A/H5N8) segment 4 (HA)2623.40.000000e+001616/1710 (94%)EPI586534A/chicken/BC/FAV22/2014 (A/H5N2) segment 4 (HA)2619.70.000000e+001617/1712 (94%)EPI662737A/chicken/Wisconsin/15-011595-1/2015 (A/H5N2) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI662701A/turkey/Wisconsin/15-012012-2/2015 (A/H5N2) segment 4 (HA)2617.80.000000e+001616/1711 (94%)EPI620408A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI595138A/greater white-fronted goose/Korea/K14-372-2/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI595133A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI595124A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI595116A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI595107A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI595094A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI590726A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI590712A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 4 (HA)2617.80.000000e+001616/1711 (94%)EPI588960A/duck/Taiwan/a043/2015 (A/H5N2) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI587521A/American wigeon/BC/050-31/2015 (A/H5N8) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI586550A/chicken/BC/FAV24/2014 (A/H5N2) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI586518A/chicken/BC/FAV20/2014 (A/H5N2) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI586509A/poultry/BC/FAV19/2014 (A/H5N2) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI585084A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI584079A/turkey/BC/FAV14/2014 (A/H5N2) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI576477A/chicken/BC/FAV9/2014 (A/H5N2) segment 4 (HA)2617.80.000000e+001615/1710 (94%)EPI573654A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 4 (HA)2617.80.000000e+001616/1711 (94%)EPI573646A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 4 (HA)2617.80.000000e+001616/1711 (94%)EPI573298A/turkey/BC/FAV10/2014 (A/H5N2) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI573239A/mallard/Korea/H1924-6/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001614/1709 (94%)EPI573229A/broiler duck/Korea/H1763/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001612/1707 (94%)EPI573226A/Korean native chicken/Korea/H1747/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001614/1709 (94%)EPI573224A/broiler duck/Korea/H1739/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001612/1707 (94%)EPI573187A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001614/1709 (94%)EPI573171A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 4 (HA)2617.80.000000e+001614/1709 (94%)EPI569383A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 4 (HA)2617.80.000000e+001617/1712 (94%)EPI595146A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 4 (HA)2614.10.000000e+001614/1710 (94%)EPI595082A/mandarin duck/Korea/K14-363-1/2014 (A/H5N8) segment 4 (HA)2614.10.000000e+001614/1710 (94%)EPI662709A/turkey/North Dakota/15-013049-1/2015 (A/H5N2) segment 4 (HA)2612.30.000000e+001614/1710 (94%)EPI595079A/mallard/Korea/N15-99/2015 (A/H5N8) segment 4 (HA)2612.30.000000e+001615/1711 (94%)EPI590733A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI590719A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI590685A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 4 (HA)2612.30.000000e+001614/1710 (94%)EPI588976A/duck/Taiwan/a068/2015 (A/H5N8) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI586542A/chicken/BC/FAV23/2014 (A/H5N2) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI586526A/chicken/BC/FAV21/2014 (A/H5N2) segment 4 (HA)2612.30.000000e+001617/1713 (94%)EPI586493A/poultry/BC/FAV15/2014 (A/H5N2) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI585092A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI576470A/chicken/BC/FAV8/2014 (A/H5N2) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI573664A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 4 (HA)2612.30.000000e+001615/1711 (94%)EPI573233A/Korean native chicken/Korea/H1847/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001613/1709 (94%)EPI573231A/broiler duck/Korea/H1839/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001611/1707 (94%)EPI573225A/broiler duck/Korea/H1745/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001611/1707 (94%)EPI573223A/broiler duck/Korea/H1734/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001611/1707 (94%)EPI573221A/broiler duck/Korea/H1731/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001611/1707 (94%)EPI573163A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001613/1709 (94%)EPI569390A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI569376A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI569372A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001616/1712 (94%)EPI553362A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001613/1709 (94%)EPI552746A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001613/1709 (94%)EPI547678A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 4 (HA)2612.30.000000e+001613/1709 (94%)EPI662730A/chicken/Nebraska/15-017990-5/2015 (A/H5N2) segment 4 (HA)2606.70.000000e+001614/1711 (94%)EPI662716A/chicken/Minnesota/15-013533-1/2015 (A/H5N2) segment 4 (HA)2606.70.000000e+001613/1710 (94%)EPI662694A/chicken/Nebraska/15-017897-1/2015 (A/H5N2) segment 4 (HA)2606.70.000000e+001614/1711 (94%)EPI620422A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 4 (HA)2606.70.000000e+001614/1711 (94%)EPI590699A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 4 (HA)2606.70.000000e+001616/1713 (94%)EPI590692A/chicken/Washington/3490-18/2015 (A/H5N2) segment 4 (HA)2606.70.000000e+001615/1712 (94%)EPI587633A/chicken/Iowa/04-20/2015 (A/H5N2) segment 4 (HA)2606.70.000000e+001615/1712 (94%)EPI586501A/poultry/BC/FAV17/2014 (A/H5N2) segment 4 (HA)2606.70.000000e+001616/1713 (94%)EPI573680A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 4 (HA)2606.70.000000e+001614/1711 (94%)EPI573672A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 4 (HA)2606.70.000000e+001614/1711 (94%)EPI573281A/turkey/Washington/61-22/2014 (A/H5N2) segment 4 (HA)2606.70.000000e+001615/1712 (94%)EPI573238A/mallard/Korea/H2003/2014 (A/H5N8) segment 4 (HA)2606.70.000000e+001613/1710 (94%)EPI573237A/mallard/Korea/H1991/2014 (A/H5N8) segment 4 (HA)2606.70.000000e+001613/1710 (94%)EPI573236A/spot-billed duck/Korea/H1981/2014 (A/H5N8) segment 4 (HA)2606.70.000000e+001613/1710 (94%)EPI573230A/broiler duck/Korea/H1803/2014 (A/H5N8) segment 4 (HA)2606.70.000000e+001611/1708 (94%)EPI548623A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 4 (HA)2606.70.000000e+001612/1709 (94%)EPI553208A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 4 (HA)2604.90.000000e+001611/1707 (94%)EPI620436A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 4 (HA)2601.20.000000e+001613/1711 (94%)EPI586558A/chicken/BC/FAV25/2014 (A/H5N2) segment 4 (HA)2601.20.000000e+001614/1712 (94%)EPI573286A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 4 (HA)2601.20.000000e+001615/1713 (94%)EPI573271A/chicken/Washington/61-9/2014 (A/H5N2) segment 4 (HA)2601.20.000000e+001614/1712 (94%)EPI573234A/broiler duck/Korea/H1864/2014 (A/H5N8) segment 4 (HA)2601.20.000000e+001609/1707 (94%)EPI573232A/broiler duck/Korea/H1840/2014 (A/H5N8) segment 4 (HA)2601.20.000000e+001609/1707 (94%)EPI662681A/chicken/Montana/15-010559-1/2015 (A/H5N2) segment 4 (HA)2595.70.000000e+001612/1711 (94%)EPI620457A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 4 (HA)2595.70.000000e+001612/1711 (94%)EPI620450A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 4 (HA)2595.70.000000e+001612/1711 (94%)EPI620443A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 4 (HA)2595.70.000000e+001612/1711 (94%)EPI620415A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 4 (HA)2595.70.000000e+001612/1711 (94%)EPI588952A/goose/Taiwan/a015/2015 (A/H5N8) segment 4 (HA)2595.70.000000e+001612/1711 (94%)EPI573276A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 4 (HA)2595.70.000000e+001613/1712 (94%)EPI568474A/green-winged teal/Korea/KU-12/2015 (A/H5) segment 4 (HA)2595.70.000000e+001601/1695 (94%)EPI442001A/goose/Shandong/k1204/2009 (A/H5N5) segment 4 (HA)2595.70.000000e+001612/1711 (94%)EPI620429A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 4 (HA)2590.10.000000e+001611/1711 (94%)EPI590679A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 4 (HA)2590.10.000000e+001599/1695 (94%)EPI585111A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 4 (HA)2590.10.000000e+001599/1695 (94%)EPI544756A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 4 (HA)2590.10.000000e+001601/1697 (94%)EPI596301A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 4 (HA)2577.20.000000e+001592/1687 (94%)EPI552776A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 4 (HA)2577.20.000000e+001592/1687 (94%)EPI442009A/goose/Guangdong/k0103/2010 (A/H5N5) segment 4 (HA)2577.20.000000e+001611/1714 (93%)EPI596295A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 4 (HA)2571.70.000000e+001598/1697 (94%)EPI552768A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA)2571.70.000000e+001598/1697 (94%)EPI593754A/goose/Yangzhou/ZG60/2009 (A/H5N5) segment 4 (HA)2568.00.000000e+001608/1712 (93%)EPI543010A/duck/Beijing/CT01/2014 (A/H5N8) segment 4 (HA)2562.40.000000e+001537/1610 (95%)EPI127406A/wild duck/Hunan/211/2005 (A/H5N1) segment 4 (HA)2556.90.000000e+001605/1711 (93%)EPI439897A/goose/Guangdong/08/2005 (A/H5N1) segment 4 (HA)2555.00.000000e+001603/1708 (93%)EPI399886A/duck/HuBei/03/2010 (A/H5N5) segment 4 (HA)2551.30.000000e+001605/1712 (93%)EPI279949A/Zhejiang/1/2006 (A/H5N1) segment 4 (HA)2551.30.000000e+001604/1711 (93%)EPI181297A/Zhejiang/1/2006 (A/H5N1) segment 4 (HA)2551.30.000000e+001604/1711 (93%)EPI597677A/duck/Hunan/316/2005 (A/H5N1) segment 4 (HA)2545.80.000000e+001603/1711 (93%)EPI542617A/duck/Beijing/FS01/2013 (A/H5N8) segment 4 (HA)2545.80.000000e+001534/1611 (95%)EPI227309A/Mallard/Huadong/lk/2005 (A/H5N1) segment 4 (HA)2545.80.000000e+001603/1711 (93%)EPI127384A/wild duck/Hunan/021/2005 (A/H5N1) segment 4 (HA)2545.80.000000e+001603/1711 (93%)EPI596289A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 4 (HA)2542.10.000000e+001563/1653 (94%)EPI552760A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 4 (HA)2542.10.000000e+001563/1653 (94%)EPI543002A/duck/Beijing/FS01/2014 (A/H5N8) segment 4 (HA)2540.30.000000e+001535/1612 (95%)EPI337076A/Sichuan/2/2006 (A/H5N1) segment 4 (HA)2540.30.000000e+001601/1710 (93%)EPI280104A/Guangdong/1/2006 (A/H5N1) segment 4 (HA)2540.30.000000e+001602/1711 (93%)EPI276046A/goose/Hubei/65/2005 (A/H5N1) segment 4 (HA)2540.30.000000e+001602/1711 (93%)EPI224777A/Shanghai/1/2006 (A/H5N1) segment 4 (HA)2540.30.000000e+001602/1711 (93%)EPI181301A/Guangdong/1/2006 (A/H5N1) segment 4 (HA)2540.30.000000e+001602/1711 (93%)EPI181298A/Sichuan/1/2006 (A/H5N1) segment 4 (HA)2540.30.000000e+001601/1710 (93%)EPI164232A/Sichuan/2/2006 (A/H5N1) segment 4 (HA)2540.30.000000e+001601/1710 (93%)EPI164224A/Sichuan/1/2006 (A/H5N1) segment 4 (HA)2540.30.000000e+001601/1710 (93%)EPI573523A/wildbird/Anhui/82/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001602/1712 (93%)EPI337107A/Shanghai/1/2006 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI280112A/Shanghai/1/2006 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI275982A/duck/Hubei/49/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001602/1712 (93%)EPI275966A/duck/Anhui/56/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI275958A/duck/Anhui/1/06 (A/H5N1) segment 4 (HA)2534.70.000000e+001602/1712 (93%)EPI275386A/Anhui/2/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001602/1712 (93%)EPI225081A/duck/Hai Phong /208/2006 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI170615A/chicken/Vietnam/216/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI170607A/Muscovy duck/Vietnam/217/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI170599A/duck/Vietnam/218/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI170591A/duck/Vietnam/219/2005 (A/H5N1) segment 4 (HA)2534.70.000000e+001601/1711 (93%)EPI107913A/goose/Yunnan/1144/2006 (A/H5N1) segment 4 (HA)2534.70.000000e+001595/1702 (93%)EPI107829A/goose/Guiyang/1304/2006 (A/H5N1) segment 4 (HA)2534.70.000000e+001595/1702 (93%)EPI551149A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA)2531.00.000000e+001573/1670 (94%)EPI275870A/chicken/Sichuan/81/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI275774A/chicken/Hunan/21/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI270188A/Vietnam/UT30850/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001598/1708 (93%)EPI227371A/muscovy duck/VietNam/209/2005 (A/H5) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI227010A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI181299A/Fujian/1/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001601/1712 (93%)EPI170742A/duck/Vietnam/215/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170741A/Muscovy duck/Vietnam/213/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170740A/chicken/Vietnam/212/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170739A/Muscovy duck/Vietnam/211/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170738A/duck/Vietnam/210/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170714A/chicken/Vietnam/202/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170690A/duck/Vietnam/205/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170674A/duck/Vietnam/207/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI170658A/chicken/Vietnam/209/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI164250A/Fujian/1/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001601/1712 (93%)EPI164216A/Anhui/1/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001601/1712 (93%)EPI107769A/duck/Guangxi/288/2006 (A/H5N1) segment 4 (HA)2529.20.000000e+001594/1702 (93%)EPI107765A/duck/Guangxi/150/2006 (A/H5N1) segment 4 (HA)2529.20.000000e+001594/1702 (93%)EPI106243A/duck/Laos/3295/2006 (A/H5N1) segment 4 (HA)2529.20.000000e+001599/1709 (93%)EPI106026A/China/GD01/2006 (A/H5N1) segment 4 (HA)2529.20.000000e+001600/1711 (93%)EPI101917A/Anhui/1/2005 (A/H5N1) segment 4 (HA)2529.20.000000e+001601/1712 (93%)EPI97209A/Duck/Fujian/1734/05 (A/H5N1) segment 4 (HA)2525.50.000000e+001596/1706 (93%)EPI337959A/Guangxi/1/2005 (A/H5N1) segment 4 (HA)2523.60.000000e+001599/1711 (93%)EPI227293A/Mallard/Huadong/S/2005 (A/H5N1) segment 4 (HA)2523.60.000000e+001599/1711 (93%)EPI170666A/duck/Vietnam/208/2005 (A/H5N1) segment 4 (HA)2523.60.000000e+001599/1711 (93%)EPI164258A/Guangxi/1/2005 (A/H5N1) segment 4 (HA)2523.60.000000e+001599/1711 (93%)EPI108331A/goose/Guangxi/1633/2006 (A/H5N1) segment 4 (HA)2523.60.000000e+001592/1701 (93%)EPI107771A/chicken/Guangxi/463/2006 (A/H5N1) segment 4 (HA)2523.60.000000e+001593/1702 (93%)EPI276022A/duck/Jiangxi/80/2005 (A/H5N1) segment 4 (HA)2521.80.000000e+001601/1714 (93%)EPI439068A/domestic green-winged teal/Hunan/3450/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001599/1712 (93%)EPI337141A/Anhui/1/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001598/1711 (93%)EPI280032A/Anhui/1/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001598/1711 (93%)EPI224965A/chicken/Hong Kong/D-06-0947/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001599/1712 (93%)EPI180956A/duck/Laos/22/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001599/1712 (93%)EPI180951A/duck/Laos/25/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001599/1712 (93%)EPI164325A/goose/Yunnan/4985/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001596/1709 (93%)EPI164240A/Anhui/2/2005 (A/H5N1) segment 4 (HA)2518.10.000000e+001601/1714 (93%)EPI108329A/goose/Guangxi/1898/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001592/1702 (93%)EPI107865A/duck/Hunan/856/2006 (A/H5N1) segment 4 (HA)2518.10.000000e+001590/1699 (93%)EPI107799A/chicken/Guiyang/3721/2005 (A/H5N1) segment 4 (HA)2518.10.000000e+001593/1703 (93%)EPI107755A/duck/Guangxi/5270/2005 (A/H5N1) segment 4 (HA)2518.10.000000e+001592/1702 (93%)EPI107753A/duck/Guangxi/5165/2005 (A/H5N1) segment 4 (HA)2518.10.000000e+001592/1702 (93%)EPI107741A/duck/Guangxi/4428/2005 (A/H5N1) segment 4 (HA)2518.10.000000e+001592/1702 (93%)EPI101919A/Anhui/2/2005 (A/H5N1) segment 4 (HA)2518.10.000000e+001601/1714 (93%)EPI78021A/chicken/Malaysia/5223/2007 (A/H5N1) segment 4 (HA)2518.10.000000e+001591/1700 (93%)EPI337121A/Sichuan/3/2006 (A/H5N1) segment 4 (HA)2516.30.000000e+001597/1711 (93%)EPI280018A/Sichuan/3/2006 (A/H5N1) segment 4 (HA)2516.30.000000e+001597/1711 (93%)EPI406406A/Muscovy duck/Ca Mau/22/2007 (A/H5N1) segment 4 (HA)2512.60.000000e+001596/1710 (93%)EPI280096A/Hunan/1/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001598/1712 (93%)EPI275462A/Guangxi/1/2005 (A/H5N1) segment 4 (HA)2512.60.000000e+001597/1711 (93%)EPI222002A/environment/Hunan/1-8/2007 (A/H5N1) segment 4 (HA)2512.60.000000e+001597/1711 (93%)EPI181296A/Hunan/1/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001598/1712 (93%)EPI174656A/duck/Hunan/3340/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001597/1711 (93%)EPI164317A/goose/Yunnan/4389/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001596/1710 (93%)EPI164309A/goose/Yunnan/4371/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001596/1710 (93%)EPI164277A/duck/Yunnan/4873/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001596/1710 (93%)EPI107857A/duck/Hunan/5152/2005 (A/H5N1) segment 4 (HA)2512.60.000000e+001592/1703 (93%)EPI107855A/duck/Hunan/5106/2005 (A/H5N1) segment 4 (HA)2512.60.000000e+001592/1703 (93%)EPI107831A/duck/Guiyang/1418/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001592/1703 (93%)EPI107815A/duck/Guiyang/497/2006 (A/H5N1) segment 4 (HA)2512.60.000000e+001592/1703 (93%)EPI107747A/duck/Guangxi/4830/2005 (A/H5N1) segment 4 (HA)2512.60.000000e+001591/1702 (93%)EPI620814A/duck/Vietnam SonLa/NCVD-33/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001595/1710 (93%)EPI337154A/Anhui/1/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI286383A/chicken/Cao Bang/07-42/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001595/1710 (93%)EPI286381A/chicken/Nam Dinh/07-32/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001595/1710 (93%)EPI280136A/Fujian/1/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI280039A/Anhui/1/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI276070A/shrike/Tibet/13/2006 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI222568A/scaly-breasted munia/Hong Kong/2433/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI222148A/lesser kestrel/Heilongjiang/194/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI181300A/Fujian/1/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI174653A/chicken/Hubei/3002/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001597/1712 (93%)EPI174646A/duck/Henan/1652/2006 (A/H5N1) segment 4 (HA)2507.00.000000e+001597/1712 (93%)EPI174642A/chicken/Anhui/1089/2007 (A/H5N1) segment 4 (HA)2507.00.000000e+001597/1712 (93%)EPI164285A/duck/Yunnan/5310/2006 (A/H5N1) segment 4 (HA)2507.00.000000e+001596/1711 (93%)EPI108515A/goose/Guangxi/532/2006 (A/H5N1) segment 4 (HA)2507.00.000000e+001590/1702 (93%)EPI108333A/chicken/Guangxi/1951/2006 (A/H5N1) segment 4 (HA)2507.00.000000e+001591/1703 (93%)EPI108327A/duck/Guangxi/1830/2006 (A/H5N1) segment 4 (HA)2507.00.000000e+001590/1702 (93%)EPI107833A/duck/Shantou/13323/2005 (A/H5N1) segment 4 (HA)2507.00.000000e+001591/1703 (93%)EPI107809A/duck/Guiyang/293/2006 (A/H5N1) segment 4 (HA)2507.00.000000e+001591/1703 (93%)EPI107803A/duck/Guiyang/3996/2005 (A/H5N1) segment 4 (HA)2507.00.000000e+001588/1698 (93%)EPI107743A/goose/Guangxi/4513/2005 (A/H5N1) segment 4 (HA)2507.00.000000e+001590/1702 (93%)EPI406392A/chicken/Cao Bang/20/2007 (A/H5N1) segment 4 (HA)2503.30.000000e+001594/1710 (93%)EPI337128A/Guangdong/2/2006 (A/H5N1) segment 4 (HA)2501.50.000000e+001596/1712 (93%)EPI337114A/Hubei/1/2006 (A/H5N1) segment 4 (HA)2501.50.000000e+001596/1712 (93%)EPI280120A/Hubei/1/2006 (A/H5N1) segment 4 (HA)2501.50.000000e+001596/1712 (93%)EPI280025A/Guangdong/2/2006 (A/H5N1) segment 4 (HA)2501.50.000000e+001596/1712 (93%)
  3. LOCUS KT963046 1701 bp cRNA linear VRL 24-NOV-2015 DEFINITION Influenza A virus (A/environment/Yunnan/YN19/2015(H5N6)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT963046 VERSION KT963046.1 GI:953525540 KEYWORDS . SOURCE Influenza A virus (A/environment/Yunnan/YN19/2015(H5N6)) ORGANISM Influenza A virus (A/environment/Yunnan/YN19/2015(H5N6)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1701) AUTHORS Feng,Y., Guan,W., Yuan,B., Wang,Y., Li,Z., Song,Y., Li,S., Yang,Z., Zhong,N., Xia,X. and Zhang,Y. TITLE Suspected poultry origin of a reassortant avian influenza A H5N6 virus from a fatal human case in Yunnan, China JOURNAL Unpublished REFERENCE 2 (bases 1 to 1701) AUTHORS Feng,Y., Guan,W., Bing,Y., Wang,Y., Li,Z., Song,Y., Li,S., Yang,Z., Zhong,N., Xia,X. and Zhang,Y. TITLE Direct Submission JOURNAL Submitted (26-OCT-2015) Kunming University of Science and Technology, Faculty of Life Science and Technology, No. 727 Jing Ming Road, Chenggong District, Kunming, Yunnan 650500, China COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1701 /organism="Influenza A virus (A/environment/Yunnan/YN19/2015(H5N6))" /mol_type="viral cRNA" /strain="A/environment/Yunnan/YN19/2015" /serotype="H5N6" /isolation_source="fecal droppings" /db_xref="taxon:1747098" /segment="4" /country="China" /collection_date="16-Feb-2015" gene 1..1701 /gene="HA" CDS 1..1701 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALO75919.1" /db_xref="GI:953525541" /translation="MEKIVLLLAIVSLVKGDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLHGNRMCDEFIRVPEWSYIVERANPA NDLCYPGNLNDYEELKHLLSRINHFEKTLIIPKSSWPNHTSSGVSAACPYQGMPSFFR NVVWLTKKNDAYPTIKMSYNNTYREDLLILWGIHHSNNAAEQTNLYKNPTTYVSVGTS TLNQRLEPKIATRSQVNGQRGRMDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKGD STIMKSEMEYGHCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRN SPLRERRRKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADRESTQKAIDGV TNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENER TLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPLYSE EASLKREEISGVKLESIGTYQILSIYSTVASSLALAIIVAGLSLWMCSNGSLQCRICI " sig_peptide 1..48 /gene="HA" mat_peptide 49..1032 /gene="HA" /product="HA1" mat_peptide 1033..1698 /gene="HA" /product="HA2" ORIGIN 1 atggagaaaa tagtgcttct tcttgcaata gttagccttg ttaaaggtga tcagatttgc 61 attggttacc atgcaaacaa ctcgacggag caggttgaca cgataatgga aaagaacgtc 121 actgttacac atgcccaaga catactggaa aagacacaca atggaaagct ctgcgattta 181 aatggagtga agcctctgat tttaaaggat tgtagtgtag ctggatggct ccatggaaac 241 cgaatgtgtg acgagttcat cagagtgccg gaatggtctt acatagtgga gagggctaac 301 ccagccaatg acctctgtta tccagggaac ctcaatgact atgaggaact gaaacaccta 361 ttgagcagaa taaatcattt tgagaagact ctgatcatcc ccaagagttc ttggcccaat 421 catacatcat caggggtgag tgcagcatgt ccataccagg gaatgccctc ctttttcaga 481 aatgtggtat ggcttaccaa aaagaacgat gcatacccaa caataaagat gagctacaat 541 aatacctata gggaagatct tttgatactg tgggggattc atcattccaa caatgcagca 601 gagcagacaa atctctataa aaacccaacc acctatgttt ccgttgggac atcaacatta 661 aaccagagat tggagccaaa aatagctact agatcccaag taaacgggca acgtggaaga 721 atggatttct tctggaccat tttaaaaccg aatgatgcaa tccacttcga gagtaatgga 781 aattttattg ctccagaata tgcatacaaa attgtcaaga aaggggactc aacaattatg 841 aaaagtgaaa tggaatatgg gcactgcaac accaaatgtc aaactccaat aggggcgata 901 aactctagta tgccattcca caatatacac cctctcacta tcggggagtg ccccaaatac 961 gtgaaatcga acaaattagt ccttgcgact gggctcagaa atagtcctct aagagaaaga 1021 agaagaaaaa gaggactatt tggagctata gcagggttta tagagggagg atggcaagga 1081 atggtagatg gttggtatgg gtaccaccat agcaatgaac aggggagtgg gtacgctgca 1141 gacagagaat ccacccaaaa ggcaatagat ggagttacca ataaggtcaa ctcgataata 1201 gacaaaatga acactcaatt tgaggccgtt ggaagagaat ttaataactt agaacggaga 1261 atagagaatt taaataagaa aatggaagac ggattcttag atgtctggac ttataatgct 1321 gaacttttag ttctcatgga aaatgagaga actctagatt tccatgactc aaatgtcaag 1381 aacctttatg acaaggtccg actacagctt agggataatg caaaggagct gggtaatggt 1441 tgtttcgagt tctatcacaa atgtgataat gaatgtatgg aaagtgtaag aaatgggacg 1501 tatgactacc ccctgtattc agaagaagcc agcttaaaaa gggaagaaat aagcggagtg 1561 aaattggaat caataggaac ttaccaaata ctgtcaattt attcaacagt ggcgagttcc 1621 ctagcactgg caatcatagt ggctggttta tctttatgga tgtgctccaa tgggtcgttg 1681 cagtgcagaa tttgcattta a
  4. Kunming University of Science and Technology in Yunnan has released 2015 poultry an environmental H5N6 sequences.
  5. Human infection with avian influenza A(H5N6) virus – ChinaDisease outbreak news 11 January 2016 On 8 January 2016, the National Health and Family Planning Commission (NHFPC) of China notified WHO of 2 additional laboratory-confirmed cases of human infection with avian influenza A(H5N6) virus. Details of the casesThe first case is a 25-year-old male from Shenzhen City, Guangdong Province, who developed symptoms on 1 January. The patient was admitted to hospital on 4 January and is now in severe condition. He has a history of visiting a live poultry market.The second case is a 42-year-old male from Jieyang City, Guangdong Province, who developed symptoms on 12 December. The patient was admitted to hospital on 19 December and died on 21 December. He had a history of visiting a live poultry market.Public health responseThe Chinese Government has taken the following surveillance and control measures: making every effort to treat the patient; collecting and testing the specimens of the patient, carrying out viral isolation and whole genome sequencing and comparison;conducting epidemiological investigation; tracing, managing and observing the close contacts of the patient;strengthening surveillance of unexplained pneumonia and routine sentinel surveillance of influenza; strengthening the etiological surveillance of influenza/avian influenza virus.WHO risk assessmentWHO continues to closely monitor the influenza A(H5N6) situation and conduct risk assessments. So far, the overall risk associated with avian influenza A(H5N6) viruses has not changed. WHO adviceWHO advises that travellers to countries with known outbreaks of avian influenza should avoid poultry farms, or contact with animals in live bird markets, or entering areas where poultry may be slaughtered, or contact with any surfaces that appear to be contaminated with faeces from poultry or other animals. Travellers should also wash their hands often with soap and water. Travellers should follow good food safety and good food hygiene practices. WHO does not advise special screening at points of entry with regard to this event, nor does it currently recommend any travel or trade restrictions. As always, a diagnosis of infection with an avian influenza virus should be considered in individuals who develop severe acute respiratory symptoms while travelling or soon after returning from an area where avian influenza is a concern. WHO encourages countries to continue strengthening influenza surveillance, including surveillance for severe acute respiratory infections (SARI) and to carefully review any unusual patterns, in order to ensure reporting of human infections under the IHR (2005), and continue national health preparedness actions. http://www.who.int/csr/don/11-january-2016-avian-influenza-china/en/#.VpSXupFEmMw.twitter
  6. Human infection with avian influenza A(H5N6) virus – ChinaDisease outbreak news 11 January 2016 On 8 January 2016, the National Health and Family Planning Commission (NHFPC) of China notified WHO of 2 additional laboratory-confirmed cases of human infection with avian influenza A(H5N6) virus. Details of the casesThe first case is a 25-year-old male from Shenzhen City, Guangdong Province, who developed symptoms on 1 January. The patient was admitted to hospital on 4 January and is now in severe condition. He has a history of visiting a live poultry market.The second case is a 42-year-old male from Jieyang City, Guangdong Province, who developed symptoms on 12 December. The patient was admitted to hospital on 19 December and died on 21 December. He had a history of visiting a live poultry market.Public health responseThe Chinese Government has taken the following surveillance and control measures: making every effort to treat the patient; collecting and testing the specimens of the patient, carrying out viral isolation and whole genome sequencing and comparison;conducting epidemiological investigation; tracing, managing and observing the close contacts of the patient;strengthening surveillance of unexplained pneumonia and routine sentinel surveillance of influenza; strengthening the etiological surveillance of influenza/avian influenza virus.WHO risk assessmentWHO continues to closely monitor the influenza A(H5N6) situation and conduct risk assessments. So far, the overall risk associated with avian influenza A(H5N6) viruses has not changed. WHO adviceWHO advises that travellers to countries with known outbreaks of avian influenza should avoid poultry farms, or contact with animals in live bird markets, or entering areas where poultry may be slaughtered, or contact with any surfaces that appear to be contaminated with faeces from poultry or other animals. Travellers should also wash their hands often with soap and water. Travellers should follow good food safety and good food hygiene practices. WHO does not advise special screening at points of entry with regard to this event, nor does it currently recommend any travel or trade restrictions. As always, a diagnosis of infection with an avian influenza virus should be considered in individuals who develop severe acute respiratory symptoms while travelling or soon after returning from an area where avian influenza is a concern. WHO encourages countries to continue strengthening influenza surveillance, including surveillance for severe acute respiratory infections (SARI) and to carefully review any unusual patterns, in order to ensure reporting of human infections under the IHR (2005), and continue national health preparedness actions. http://www.who.int/csr/don/11-january-2016-avian-influenza-china/en/#.VpSXupFEmMw.twitter
  7. Map update https://www.google.com/maps/d/edit?mid=zv94AJqgUct4.khRctlgYWTZM
  8. References1. World Health Organization. Antigenic and genetic characteristics of zoonotic influenza viruses and development of candidate vaccine viruses for pandemic preparedness [cited 2015 Feb 27].http://www.who.int/influenza/vaccines/virus/201502_zoonotic_vaccinevirusupdate.pdf?ua=12. European Food Safety Authority. Highly pathogenic avian influenza A subtype H5N8. EFSA Journal. 2014;12:3941–72.3. Centers for Disease Control and Prevention. Outbreaks of avian influenza A (H5N2), (H5N8), and (H5N1) among birds—-United States, December 2014–January 2015. MMWR Morb Mortal Wkly Rep. 2015;64:111 . [PMC free article] [PubMed]4. Shen H, Wu B, Chen Y, Bi Y, Xie Q, Influenza A. H5N6) virus reassortant, southern China, 2014.Emerg Infect Dis. 2015;21:1261–2. 10.3201/eid2107.140838 [PMC free article] [PubMed] [Cross Ref]5. Bi Y, Mei K, Shi W, Liu D, Yu X, Gao Z, et al. Two novel reassortants of avian influenza A(H5N6) virus in China. J Gen Virol. 2015;96:975–81 . 10.1099/vir.0.000056 [PubMed] [Cross Ref]6. Yang ZF, Mok CKP, Peiris JSM, Zhong NS. Human disease caused by novel reassortant highly pathogenic avian influenza A H5N6 virus: A case report. N Engl J Med. 2015. In press.7. Wang G, Deng G, Shi J, Luo W, Zhang G, Zhang Q, et al. H6 influenza viruses pose a potential threat to human health. J Virol. 2014;88:3953–64. 10.1128/JVI.03292-13 [PMC free article] [PubMed] [Cross Ref]8. Wong FY, Phommachanh P, Kalpravidh W, Chanthavisouk C, Gilbert J, Bingham J, et al. Reassortant highly pathogenic influenza A(H5N6) virus in Laos. Emerg Infect Dis. 2015;21:511–6. 10.3201/eid2103.141488 [PMC free article] [PubMed] [Cross Ref]9. Hai-bo W, Chao-tan G, Ru-feng L, Li-hua X, En-kang W, Jin-biao Y, et al. Characterization of a highly pathogenic H5N1 avian influenza virus isolated from ducks in eastern China in 2011. Arch Virol. 2012;157:1131–6. 10.1007/s00705-012-1259-1 [PubMed] [Cross Ref]10. Deng G, Tan D, Shi J, Cui P, Jiang Y, Liu L, et al. Complex reassortment of multiple subtypes of avian influenza viruses in domestic ducks at the Dongting Lake region of China. J Virol. 2013;87:9452–62. 10.1128/JVI.00776-13 [PMC free article] [PubMed] [Cross Ref]
  9. To the Editor: Since the first detection of the influenza A(H5N1) virus in geese in China during 1996 (http://www.cdc.gov/flu/avianflu/h5n1-virus.htm), H5 subtype viruses have continued to reassort and evolve, giving rise to multiple virus clades and gene constellations. Recently, clade 2.3.4.4 viruses have shown a predilection for genetic reassortment, giving rise to H5N2, H5N5, H5N6, and H5N8 virus subtypes, and have become globally widespread, causing infections in wild birds or poultry elsewhere in Asia, and in Europe and North America (1–3). The H5N6 subtype viruses have circulated in China since 2013 and have been mainly identified in ducks or chickens in the southern (Jiangxi, Guangdong) or western (Sichuan) areas (4,5). Two lineages of H5N6 viruses with distant genetic background were found among the H5N6 viruses isolated in China (5). In China, there have been 3 cases of H5N6 virus infection among humans, causing 2 deaths. We recently reported the clinical characteristics and progression of a patient infected by the H5N6 virus in Guangzhou City, China, who was the second reported case-patient infected with this subtype (6). After having contact with poultry, he began to manifest an influenza-like illness on December 3, 2014, and progressed to a primary viral pneumonia. The H5N6 virus A/Guangzhou/39715/2014 (GenBank accession nos. KP765785-KP765792) was isolated from a throat swab specimen collected on day 8 of his illness by inoculation into 9–11-day-old, specific pathogen-free embryonated chicken eggs. He recovered from his infection and was discharged from the hospital on day 58. Multiple sequence alignments showed that the hemagglutinin (HA) and neuraminidase (NA) genes of A/Guangzhou/39715/2014 shared the highest nucleotide identity with A/chicken/Dongguan/2690/2013 (H5N6) (99.4% and 98.3%, respectively) (Technical Appendix 1). All internal genes were also closely related to A/chicken/Dongguan/2690/2013 (H5N6), ranging from 98.5% nucleotide identity for the polymerase acidic (PA) gene and 100.0% for the matrix (M) gene. The genome segments were also 98.2%–99.7% identical to A/duck/Guangdong/GD012014 and 98.3%–99.4% identical to A/chicken/Laos/LPQ001/2014, which caused outbreaks in domestic ducks and poultry, respectively, indicating that these viruses have the same genotype. HA gene phylogeny confirmed that this virus belonged to clade 2.3.4.4 (Technical Appendix 1, Figure 4). Notably, the HA genes of the H5N1, H5N2, and H5N8 viruses that were recently detected in wild birds in North America also belong to this clade, indicating that viruses from this clade are becoming globally widespread. More specifically, this isolate clustered within a sublineage that includes H5N6 isolates from poultry from Guangdong and Jiangxi provinces, China, and from Laos (5,7). The A/Sichuan/26221/2014 (H5N6) virus that recently caused a fatal human infection in Sichuan Province, China is also within clade 2.3.4.4, but clusters in a distinct sub-lineage (Figure, panel A). FigurePhylogenetic trees of influenza A(H5N6) virus isolate A/Guangzhou/39715/2014 compared with other influenza viruses based on the A) hemagglutinin (HA) and B) neuraminidase (NA) genes, China. Maximum-likelihood trees were constructed by using the the general ...The HA cleavage site of both human isolates contained multiple basic amino acids, suggesting that that they are highly pathogenic avian influenza viruses. Amino acid substitutions E190D, Q226L, or G228S (H3 numbering) in the HA gene that are known to enhance binding to mammalian receptors were not found. The NA gene phylogeny showed that A/Guangzhou/39715/2014 is likely originated from group II lineage influenza A(H6N6) viruses that circulate among domestic ducks in China (8) (Figure, panel B). An 11-aa deletion at the residue 59–69 position of the NA protein was identified in the isolate of this study, in the other H5N6 viruses of the same cluster, and in an H4N6 virus isolate from a duck in Shanghai, China. This deletion was monophyletic and likely originated from A/swine/Guangdong/K6/2010 (H6N6)–like viruses (Figure, panel B). However, it was not observed in other 2.3.4.4 viruses, such as A/Sichuan/26221/2014. No mutations associated with oseltamivir or amantadine resistance was found in NA or M2 genes. The internal genes of the current H5N6 isolate were similar to 2.3.2.1b H5N1 subtype viruses found in domestic ducks from south-central and eastern China (5,7–10 [Technical Appendix 1]). The 6 internal genes are 97%–99% homologous to another isolate from a human, A/Sichuan/26221/2014, suggesting that the internal genes of the viruses may be reassorted from a common origin. The phylogenetic clustering observed for the HA gene was also conserved for the internal genes. In contrast with all avian viruses within this clade, the current human isolate contains the mammalian adaptation mutation PB2-E627K, and A/Sichuan/26221/2014 has acquired PB2-D701N, suggesting a rapid acquisition of mammalian adaptation changes that likely arose after human infection. There is still limited information on human disease caused by the emerging H5 lineage. Our genetic analysis suggests that the H5N6 virus isolated from the patient is originated from the avian host. Although the genetic background of H5N6 virus isolated from the third case in Yunnan Province, China, on January 2015 is still not known, the isolates from the human cases of H5N6 infection reported to date show distant genetic diversity, indicating that viruses from both clusters may pose a threat to humans. This rapidly evolving and globally spreading virus lineage thus provides a threat to global public health. Technical Appendix 1:Full phylogenetic trees of polymerase basic 2 (PB2) (Technical Appendix Figure 1), PB1 (Technical Appendix Figure 2), polymerase acidic (PA) (Technical Appendix Figure 3), hemagglutinin (HA) (Technical Appendix Figure 4), nucleoprotein (NP) (Technical Appendix Figure 5), neuraminidase (NA) (Technical Appendix Figure 6), matrix (M) (Technical Appendix Figure 7), and nonstructural (NS) (Technical Appendix Figure 8) genes. Click here to view.(2.1M, pdf)Technical Appendix 2:Authors and originating and submitting laboratories of the sequences from the Global Initiative on Sharing Avian Influenza Data EpiFlu Database, on which the current research is based. Click here to view.(63K, xlsx)Go to:AcknowledgmentsWe thank the authors and originating and submitting laboratories of the sequences in the EpiFlu Database from Global Initiative on Sharing Avian Influenza Data, on which this research is based (Technical Appendix 2). This study was supported by Municipal Science and Technology Bureau Foundation of Guangzhou (2014Y2-00031), National Science and Technology Major Project of the Ministry of Science and Technology of China (2014ZX10004006), Science research project of the Guangdong Province (2013B020224006), the Area of Excellence Scheme of the Hong Kong University Grants Committee (AoE/M-12/06) of the Government of Hong Kong Special Administrative Region, China and Contract HHSN272201400006C from the National Institute of Allergy and Infectious Disease, National Institutes of Health, USA. Go to:Footnotes Suggested citation for this article: Mok CPK, Guan WD, Liu XQ, Lamers MM, Li XB, Wang M, et al. Genetic characterization of highly pathogenic avian influenza A(H5N6) virus, Guangdong, China [letter]. Emerg Infect Dis. 2015 Dec [date cited]. http://dx.doi.org/10.3201/eid2112.150809 1These authors contributed equally to this article.
  10. Emerg Infect Dis. 2015 Dec; 21(12): 2268–2271.doi: 10.3201/eid2112.150809PMCID: PMC4672456Genetic Characterization of Highly Pathogenic Avian Influenza A(H5N6) Virus, Guangdong, ChinaChris Ka Pun Mok,1 Wen Da Guan,1 Xiao Qing Liu,1 Mart Matthias Lamers,1 Xiao Bo Li, Ming Wang, Tami Jing Shu Zhang, Qing Ling Zhang, Zheng Tu Li, Ji Cheng Huang, Jin Yan Lin, Yong Hui Zhang, Ping Zhao, Horace Hok Yeung Lee, Ling Chen, Yi Min Li, Joseph Sriyal Malik Peiris, Rong Chang Chen, Nan Shan Zhong, and Zi Feng YangThe University of Hong Kong,HKU–Pasteur Research Pole, Hong Kong, China (C.K.P Mok, M.M. Lamers, T.J.S. Zhang, H.H.Y. Lee, J.S.M. Peiris);State Key Laboratory of Respiratory Disease, Guangzhou, China (W.D. Guan, X.Q. Liu, Q.L. Zhang, Z.T. Li, L. Chen, Y.M. Li, R.C. Chen, N.S. Zhong, Z.F. Yang);Guangdong Inspection and Quarantine Technology Center, Guangzhou (X.B. Li, J.C. Huang);Guangdong Center for Disease Control and Prevention, Guangzhou (J.Y. Lin, Y.H. Zhang);Guangzhou Center for Disease Control and Prevention, Guangzhou (M. Wang);Guangzhou Clifford Hospital, Guangzhou (P. Zhao)Corresponding author.Address for correspondence: Zi Feng Yang, Guangzhou Institute of Respiratory Disease, National Clinical Research Center of Respiratory Disease, State Key Laboratory of Respiratory Disease (Guangzhou Medical University), 151 Yanjiang Rd, Guangzhou 510120, P.R. China; email: moc.361@hayffej
  11. EID paper on sequence from first Guangdong H5N6 case http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4672456/ Genetic Characterization of Highly Pathogenic Avian Influenza A(H5N6) Virus, Guangdong, China.
  12. Map update https://www.google.com/maps/d/edit?mid=zv94AJqgUct4.khRctlgYWTZM
  13. Map update https://www.google.com/maps/d/edit?mid=zv94AJqgUct4.khRctlgYWTZM
  14. Map update https://www.google.com/maps/d/edit?mid=zv94AJqgUct4.khRctlgYWTZM
  15. H5N6-infected mother gives birth to healthy child English.news.cn 2016-01-10 20:29:42 GUANGZHOU, Jan. 10 (Xinhua) -- A H5N6 virus infected mother gave birth to a healthy child in the city of Zhaoqing in south China's Guangdong Province, according to a local hospital. The 40-year-old mother was diagnosed with H5N6 avian flu in the city's Zhaoqing No.1 hospital when she was 35 weeks pregnant. She gave birth to a healthy child on Dec. 29, 2015 and is still in critical condition due to a cesarean section and lung infection, said Zhong Jiali, spokesperson of the hospital on Sunday. Doctors have asked all close contacts of the woman to take Tamiflu, an anti-viral drug for flu, as a preventive measure. Editor: Xiang Bo http://news.xinhuanet.com/english/2016-01/10/c_134995552.htm
  16. CHP closely monitors additional human case of avian influenza A(H5N6) in Jiangxi **************************************************** The Centre for Health Protection (CHP) of the Department of Health (DH) is today (January 10) closely monitoring an additional human case of avian influenza A(H5N6) in Jiangxi, and again urged the public to maintain strict personal, food and environmental hygiene both locally and during travel. Under routine surveillance of the Health and Family Planning Commission of Jiangxi Province, a severe pneumonia case tested positive for H5N6 virus. It involves a 42-year-old man who lived in Jieyang, Guangdong, with exposure to poultry market. He died on December 21, 2015, in a hospital in Ganzhou, Jiangxi. No abnormalities were detected among his close contacts. From 2014 to date, a total of eight human cases of avian influenza A(H5N6) have been reported by the Mainland health authorities. "All novel influenza A infections, including H5N6, are statutory notifiable infectious diseases in Hong Kong," a spokesman for the CHP said. "We will remain vigilant and work closely with the World Health Organization and relevant health authorities to monitor the latest developments," the spokesman said. The DH's Port Health Office conducts health surveillance measures at all boundary control points. Thermal imaging systems are in place for body temperature checks on inbound travellers. Suspected cases will be immediately referred to public hospitals for follow-up. The display of posters and broadcast of health messages in departure and arrival halls as health education for travellers is under way. The travel industry and other stakeholders are regularly updated on latest information. Travellers, especially those returning from avian influenza-affected areas with fever or respiratory symptoms, should immediately wear masks, seek medical attention and reveal their travel history to doctors. Health-care professionals should pay special attention to patients who might have had contact with poultry, birds or their droppings in affected areas. The public should remain vigilant and take heed of the advice against avian influenza below: * Do not visit live poultry markets and farms. Avoid contact with poultry, birds and their droppings; * If contact has been made, thoroughly wash hands with soap; * Avoid entering areas where poultry may be slaughtered and contact with surfaces which might be contaminated by droppings of poultry or other animals; * Poultry and eggs should be thoroughly cooked before eating; * Wash hands frequently with soap, especially before touching the mouth, nose or eyes, handling food or eating; after going to the toilet or touching public installations or equipment (including escalator handrails, elevator control panels and door knobs); and when hands are dirtied by respiratory secretions after coughing or sneezing; * Cover the nose and mouth while sneezing or coughing, hold the spit with a tissue and put it into a covered dustbin; * Avoid crowded places and contact with fever patients; and * Wear masks when respiratory symptoms develop or when taking care of fever patients. The public may visit the CHP's pages below for more information: * The avian influenza page (www.chp.gov.hk/en/view_content/24244.html); * The weekly Avian Influenza Report (www.chp.gov.hk/en/view_content/3879.html); * Global statistics and affected areas of avian influenza (www.chp.gov.hk/files/pdf/global_statistics_avian_influenza_e.pdf); * The Facebook Page (www.fb.com/CentreforHealthProtection); and * The YouTube Channel (www.youtube.com/c/ChpGovHkChannel). Ends/Sunday, January 10, 2016 Issued at HKT 22:36 NNNN http://www.info.gov.hk/gia/general/201601/10/P201601100915.htm
  17. A fatal H5N6 case, 42M, was confirmed in Ganzhou, Jiangxi , ex Jieyang, Guagdong via routine surveillance.
  18. 4th case prior to the recent 3. 3 of the first 4 had died. Of the recent 3, one has died and 2 remain hospitalized. Of the 7 confirmed cases, there has only been one discharge. Notification of confirmed human case of avian influenza A(H5N6) in Yunnan******************************************************** The Centre for Health Protection (CHP) of the Department of Health (DH) has been notified by the National Health and Family Planning Commission of a confirmed human case of avian influenza A(H5N6) today (July 11) affecting a 37-year-old woman in Yunnan province. The patient, presented with fever and cough with sputum since July 6, was admitted to a local hospital on July 9 and died on July 10. "All novel influenza A infections (including H5N6) are notifiable diseases in Hong Kong," a spokesman for the DH said. http://www.info.gov.hk/gia/general/201507/11/P201507110974.htm
  19. Case Count: Detected U.S. Human Infections with H3N2v by State since August 2011Language:EnglishEspañolRecommend on FacebookTweetTable 1. Case Count: Detected U.S. Human Infections with H3N2v by State since August 2011States Reporting H3N2v CasesCases in 2011Cases in 2012Cases in 2013Cases in 2014Cases in 2015Hawaii 1 Illinois 41 Indiana 213814 Iowa 311 Maine 2 Maryland 12 Michigan 62 1Minnesota 5 1Ohio 10712 Pennsylvania 311 Utah 1* West Virginia 23 Wisconsin 20 1 Total 123091932* Case in Utah occurred in April 2012. This chart indicates the number of CDC-reported infections with H3N2v variant influenza A viruses since August 2011 and is current as of September 4, 2015. This case count will be updated each Friday as new cases are reported. NOTE: The state totals reported by CDC may not always be consistent with those reported by state health departments. If there is a discrepancy between these two counts, data from the state health departments should be used as the most accurate number. Table 2. H3N2v Hospitalizations and Deaths Since July 2012*H3N2v Hospitalizations and Deaths Since July 2012Cases in 2012Cases in 2013Cases in 2014Cases in 2015Hospitalizations 16112Deaths 1000* As reported by states to CDC. This chart indicates the number of CDC-reported infections with H3N2v variant influenza A viruses since July 2012 and is current as of September 4, 2015. This case count will be not be updated again until new cases are reported. See Reported Infections with Variant Influenza Viruses in the United States since 2005 for a complete list of human infections with all variant viruses since 2005. http://www.cdc.gov/flu/swineflu/h3n2v-case-count.htm
  20. Novel Influenza A Virus:One human infection with a novel influenza A virus was reported by the state of New Jersey. The person was infected with an influenza A (H3N2) variant (H3N2v) virus. The patient was not hospitalized and has fully recovered from their illness. The patient visited a farm near where swine are frequently housed but no direct contact with swine was reported in the week prior to illness onset. No ongoing human-to-human transmission has been identified. Early identification and investigation of human infections with novel influenza A viruses are critical so that the risk of infection can be more fully appreciated and appropriate public health measures can be taken. Additional information on influenza in swine, variant influenza infection in humans, and strategies to interact safely with swine can be found at http://www.cdc.gov/flu/swineflu/index.htm. http://www.cdc.gov/flu/weekly/
  21. CDC's week 52 FluView cites first H3N2v case in New Jersey -no direct swine contact.
  22. CHP notified of additional human case of avian influenza A(H5N6) in Guangdong********************************************************* The Centre for Health Protection (CHP) of the Department of Health (DH) was notified of an additional human case of avian influenza A (H5N6) by the Health and Family Planning Commission of Guangdong Province today (January 7), and again urged the public to maintain strict personal, food and environmental hygiene both locally and during travel. It involves a man aged 25 in Longgang, Shenzhen, currently hospitalised for treatment in serious condition.? From 2014 to date, a total of seven human cases of avian influenza A(H5N6) have been reported by the Mainland health authorities. "All novel influenza A infections, including H5N6, are statutory notifiable infectious diseases in Hong Kong," a spokesman for the CHP said.? "We will remain vigilant and work closely with the World Health Organization and relevant health authorities to monitor the latest developments," the spokesman said. The DH's Port Health Office conducts health surveillance measures at all boundary control points. Thermal imaging systems are in place for body temperature checks on inbound travellers. Suspected cases will be immediately referred to public hospitals for follow-up. The display of posters and broadcast of health messages in departure and arrival halls as health education for travellers is under way. The travel industry and other stakeholders are regularly updated on latest information. Travellers, especially those returning from avian influenza-affected areas with fever or respiratory symptoms, should immediately wear masks, seek medical attention and reveal their travel history to doctors. Health-care professionals should pay special attention to patients who might have had contact with poultry, birds or their droppings in affected areas. The public should remain vigilant and take heed of the advice against avian influenza below: * Do not visit live poultry markets and farms. Avoid contact with poultry, birds and their droppings; * If contact has been made, thoroughly wash hands with soap; * Avoid entering areas where poultry may be slaughtered and contact with surfaces which might be contaminated by droppings of poultry or other animals; * Poultry and eggs should be thoroughly cooked before eating; * Wash hands frequently with soap, especially before touching the mouth, nose or eyes, handling food or eating; after going to the toilet or touching public installations or equipment (including escalator handrails, elevator control panels and door knobs); and when hands are dirtied by respiratory secretions after coughing or sneezing; * Cover the nose and mouth while sneezing or coughing, hold the spit with a tissue and put it into a covered dustbin; * Avoid crowded places and contact with fever patients; and * Wear masks when respiratory symptoms develop or when taking care of fever patients. The public may visit the CHP's pages below for more information: * The avian influenza page (www.chp.gov.hk/en/view_content/24244.html); * The weekly Avian Influenza Report (www.chp.gov.hk/en/view_content/3879.html); * Global statistics and affected areas of avian influenza (www.chp.gov.hk/files/pdf/global_statistics_avian_influenza_e.pdf); * The Facebook Page (www.fb.com/CentreforHealthProtection); and * The YouTube Channel (www.youtube.com/c/ChpGovHkChannel). Ends/Thursday, January 7, 2016 Issued at HKT 21:05 NNNN http://www.info.gov.hk/gia/general/201601/07/P201601070863.htm
  23. CHP reporting another H5N6 case in Guangdong (3rd case in a week). This case increases the number of confirmed cases to 7 (2 in 2014 and 2 in 2015 prior to recent cases).
  24. EPI676397A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI602094A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI676399A/environment/GZ/77/2014 (A/H5N6) segment 4 (HA)2981.60.000000e+001676/1706 (98%)EPI602113A/environment/Jiangxi/10170/2014 (A/H5N6) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI601997A/black chicken/Jiangxi/10139/2014 (A/H0) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI599369A/environment/Jiangxi/10171/2014 (A/H5N6) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI599360A/environment/Jiangxi/10164/2014 (A/H5N6) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI599353A/duck/Jiangxi/10160/2014 (A/H5N6) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI585724A/cat/Sichuan/SC18/2014 (A/H5N6) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI533583A/Sichuan/26221/2014 (A/H5N6) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI602107A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI601986A/black chicken/Jiangxi/10136/2014 (A/H0) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI601977A/black chicken/Jiangxi/10131/2014 (A/H0) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI599306A/chicken/Shenzhen/1845/2013 (A/H5N6) segment 4 (HA)2976.10.000000e+001675/1706 (98%)EPI590894A/duck/Sichuan/NCXJ24/2014 (A/H5N6) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI590893A/duck/Sichuan/NCXJ16/2014 (A/H5N6) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI590890A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI547402A/environment/Zhenjiang/C13/2013 (A/H5N6) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI602056A/chicken/Jiangxi/10122/2014 (A/H0) segment 4 (HA)2972.40.000000e+001673/1705 (98%)EPI569711A/duck/Zhejiang/6D2/2013 (A/H5N6) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI569710A/chicken/Zhejiang/6C2/2013 (A/H5N6) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI585731A/swan 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(HA)2942.80.000000e+001668/1705 (97%)EPI398965A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI676400A/environment/GZ/NIOSH-187/2014 (A/H5N6) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI585379A/duck/Vietnam/1144/2014 (A/H5N6) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI585378A/duck/Vietnam/1434/2014 (A/H5N6) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI585376A/duck/Vietnam/1507/2014 (A/H5N6) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI585374A/duck/Vietnam/1152/2014 (A/H5N6) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI681293A/goose/Zhejiang/1120132/2014 (A/H5N6) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI681289A/goose/Zhejiang/925105/2014 (A/H5N6) segment 4 (HA)2931.80.000000e+001668/1707 (97%)EPI585377A/duck/Vietnam/1511/2014 (A/H5N6) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI589841A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI589366A/muscovy duck/Quang 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(HA)2870.80.000000e+001655/1705 (97%)EPI645042A/swine/Guangdong/2/2014 (A/H5N6) segment 4 (HA)2869.00.000000e+001654/1704 (97%)EPI681287A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA)2865.30.000000e+001654/1705 (97%)EPI602491A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA)2865.30.000000e+001654/1705 (97%)EPI561495A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA)2865.30.000000e+001654/1705 (97%)EPI530063A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA)2865.30.000000e+001654/1705 (97%)EPI681285A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA)2859.70.000000e+001653/1705 (96%)EPI590813A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 4 (HA)2859.70.000000e+001653/1705 (96%)EPI493825A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA)2859.70.000000e+001654/1706 (96%)EPI681290A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA)2854.20.000000e+001652/1705 (96%)EPI681286A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA)2854.20.000000e+001652/1705 (96%)EPI672795A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA)2854.20.000000e+001652/1705 (96%)EPI672787A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA)2854.20.000000e+001652/1705 (96%)EPI602037A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA)2854.20.000000e+001653/1706 (96%)EPI593889A/Guangzhou/39715/2014 (A/H5N6) segment 4 (HA)2854.20.000000e+001652/1705 (96%)EPI590806A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 4 (HA)2854.20.000000e+001652/1705 (96%)EPI583870A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA)2854.20.000000e+001652/1705 (96%)EPI544892A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA)2854.20.000000e+001654/1707 (96%)EPI399960A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA)2854.20.000000e+001655/1708 (96%)EPI681280A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA)2850.50.000000e+001650/1703 (96%)EPI682912A/duck/Wuhan/WHYF03/2015 (A/H5N6) segment 4 (HA)2848.70.000000e+001652/1706 (96%)EPI682911A/duck/Wuhan/WHYF02/2015 (A/H5N6) segment 4 (HA)2848.70.000000e+001652/1706 (96%)EPI676398A/environment/GZ/76/2014 (A/H5N2) segment 4 (HA)2848.70.000000e+001652/1706 (96%)EPI530986A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA)2848.70.000000e+001651/1705 (96%)EPI682939A/turtledove/Wuhan/HKBJ07/2015 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI682938A/turtledove/Wuhan/WHBJ26/2014 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI682937A/turtledove/Wuhan/HKBJ43/2015 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI682936A/turtledove/Wuhan/HKBJ27/2015 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI682935A/turtledove/Wuhan/WHBJ28/2014 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI682917A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA)2843.10.000000e+001649/1704 (96%)EPI682914A/chicken/Wuhan/WHYJ02/2015 (A/H5N6) segment 4 (HA)2843.10.000000e+001651/1706 (96%)EPI682913A/chicken/Wuhan/WHYJ01/2015 (A/H5N6) segment 4 (HA)2843.10.000000e+001651/1706 (96%)EPI681288A/goose/Zhejiang/925036/2014 (A/H5N6) segment 4 (HA)2843.10.000000e+001651/1706 (96%)EPI681279A/duck/Zhejiang/727041/2014 (A/H5N2) segment 4 (HA)2843.10.000000e+001651/1706 (96%)EPI550768A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI550763A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI550759A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI550757A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA)2843.10.000000e+001652/1707 (96%)EPI530985A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA)2843.10.000000e+001651/1706 (96%)EPI682934A/turtledove/Wuhan/WHBJ12/2014 (A/H5N6) segment 4 (HA)2837.60.000000e+001651/1707 (96%)EPI681298A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA)2837.60.000000e+001650/1706 (96%)EPI550752A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 4 (HA)2837.60.000000e+001651/1707 (96%)EPI507673A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA)2837.60.000000e+001650/1706 (96%)EPI493817A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA)2837.60.000000e+001651/1707 (96%)EPI596610A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 4 (HA)2833.90.000000e+001648/1705 (96%)EPI596598A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 4 (HA)2832.00.000000e+001648/1705 (96%)EPI596592A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 4 (HA)2832.00.000000e+001648/1705 (96%)EPI596586A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 4 (HA)2832.00.000000e+001648/1705 (96%)EPI596580A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 4 (HA)2832.00.000000e+001648/1705 (96%)EPI596574A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 4 (HA)2832.00.000000e+001648/1705 (96%)EPI593896A/duck/Guangzhou/41227/2014 (A/H5N6) segment 4 (HA)2832.00.000000e+001648/1705 (96%)EPI682915A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA)2826.50.000000e+001647/1705 (96%)EPI681297A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA)2826.50.000000e+001648/1706 (96%)EPI596622A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 4 (HA)2826.50.000000e+001647/1705 (96%)EPI596616A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 4 (HA)2826.50.000000e+001647/1705 (96%)EPI596604A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 4 (HA)2826.50.000000e+001647/1705 (96%)EPI586256A/Little egret/Vietnam/WBT210/2014 (A/H5N6) segment 4 (HA)2826.50.000000e+001647/1705 (96%)EPI586255A/Black-crowned night heron/Vietnam/WBT198/2014 (A/H5N6) segment 4 (HA)2826.50.000000e+001647/1705 (96%)EPI586254A/Spotted dove/Vietnam/WBT191/2014 (A/H5N6) segment 4 (HA)2826.50.000000e+001647/1705 (96%)EPI586258A/Chinese pond heron/Vietnam/WBT231/2014 (A/H5N6) segment 4 (HA)2821.00.000000e+001646/1705 (96%)EPI499478A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA)2821.00.000000e+001646/1705 (96%)EPI590898A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 4 (HA)2815.40.000000e+001645/1705 (96%)EPI590897A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 4 (HA)2815.40.000000e+001645/1705 (96%)EPI328878A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA)2809.90.000000e+001644/1705 (96%)EPI586257A/Common moorhen/Vietnam/WBT226/2014 (A/H5N6) segment 4 (HA)2804.30.000000e+001643/1705 (96%)EPI590116A/chicken/Tonghai/802/2014 (A/H5N1) segment 4 (HA)2798.80.000000e+001642/1705 (96%)EPI590115A/chicken/Tonghai/5/2014 (A/H5N1) segment 4 (HA)2798.80.000000e+001642/1705 (96%)EPI590114A/chicken/Tonghai/3/2014 (A/H5N1) segment 4 (HA)2798.80.000000e+001642/1705 (96%)EPI590109A/chicken/AnNing/1/2014 (A/H5N1) segment 4 (HA)2798.80.000000e+001642/1705 (96%)EPI585951A/chicken/TongHai/302/2014 (A/H5N1) segment 4 (HA)2798.80.000000e+001642/1705 (96%)EPI682916A/duck/Wuhan/JXYFB22/2015 (A/H5N6) segment 4 (HA)2793.30.000000e+001641/1705 (96%)EPI590896A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 4 (HA)2793.30.000000e+001642/1706 (96%)EPI641392A/chicken/Yunnan/19/2015 (A/H5N6) segment 4 (HA)2789.60.000000e+001643/1707 (96%)EPI590111A/chicken/AnNing/6/2014 (A/H5N1) segment 4 (HA)2787.70.000000e+001641/1706 (96%)EPI590110A/chicken/AnNing/4/2014 (A/H5N1) segment 4 (HA)2782.20.000000e+001639/1705 (96%)EPI328870A/duck/Eastern China/008/2008 (A/H5N5) segment 4 (HA)2776.60.000000e+001639/1706 (96%)EPI593753A/goose/Yangzhou/ZG62/2011 (A/H5N5) segment 4 (HA)2771.10.000000e+001638/1706 (96%)EPI328886A/duck/Eastern China/108/2008 (A/H5N1) segment 4 (HA)2771.10.000000e+001638/1706 (96%)EPI641396A/chicken/Yunnan/25A/2015 (A/H5N6) segment 4 (HA)2767.40.000000e+001639/1707 (96%)EPI641394A/chicken/Yunnan/22/2015 (A/H5N6) segment 4 (HA)2767.40.000000e+001639/1707 (96%)EPI493833A/duck/Guangdong/wy24/2008 (A/H5N5) segment 4 (HA)2767.40.000000e+001640/1709 (95%)EPI573197A/chicken/Korea/H881/2014 (A/H5N8) segment 4 (HA)2765.60.000000e+001637/1706 (95%)EPI561612A/breeder duck/Korea/H158/2014 (A/H5N8) segment 4 (HA)2765.60.000000e+001637/1706 (95%)EPI641398A/Yunnan/0127/2015 (A/H5N6) segment 4 (HA)2761.90.000000e+001638/1707 (95%)EPI442025A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 4 (HA)2761.90.000000e+001639/1709 (95%)EPI590113A/chicken/DaLi/502/2014 (A/H5N1) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI590112A/chicken/DaLi/302/2014 (A/H5N1) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI585595A/baikal teal/Korea/2417/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI585589A/baikal teal/Korea/2399/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI585586A/baikal teal/Korea/1456/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI573242A/Common Teal/Korea/H844/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561646A/breeder duck/Korea/H249/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561626A/mallard/Korea/H207/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561605A/broiler duck/Korea/H145/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561591A/breeder duck/Korea/H128/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561529A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561508A/bean goose/Korea/H53/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561341A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI585594A/baikal teal/Korea/2416/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585592A/baikal teal/Korea/2406/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585591A/baikal teal/Korea/2403/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585590A/baikal teal/Korea/2402/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585582A/baikal teal/Korea/1448/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585581A/baikal teal/Korea/1447/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585579A/baikal teal/Korea/1445/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585577A/baikal teal/Korea/1437/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI573200A/Korean native chicken/Korea/H1139/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI573199A/breeder chicken/Korea/H1068/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI561674A/bean goose/Korea/H328/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI561577A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI561570A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI561563A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI561542A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI561522A/broiler duck/Korea/H65/2014 (A/H5N8) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI585593A/baikal teal/Korea/2414/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI585587A/baikal teal/Korea/1457/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI585584A/baikal teal/Korea/1452/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI585583A/baikal teal/Korea/1449/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI561705A/bean goose/Korea/H40/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI561667A/mallard/Korea/H297/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI561653A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI561633A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI509709A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI509704A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI585580A/baikal teal/Korea/1446/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI585578A/baikal teal/Korea/1441/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI573208A/gadwall/Korea/H1351/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI573196A/broiler duck/Korea/H651/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI573194A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561697A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561681A/tundra swan/Korea/H411/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561660A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561598A/broiler duck/Korea/H133/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561360A/broiler duck/Korea/H49/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561348A/broiler duck/Korea/H47/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561336A/broiler duck/Korea/H48/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561204A/broiler duck/Korea/H31/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561196A/broiler duck/Korea/H29/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI561187A/waterfowl/Korea/S005/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI517161A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI585588A/baikal teal/Korea/1458/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI585585A/baikal teal/Korea/1454/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001633/1707 (95%)EPI573207A/chicken/Korea/H1350/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI573201A/chicken/Korea/H1236/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI573192A/breeder chicken/Korea/H503/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI561690A/common teal/Korea/H455-30/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI561556A/Coot/Korea/H81/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI561549A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI561515A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI542628A/mallard/Korea/W452/2014 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI573240A/breeder duck/Korea/H345/2014 (A/H5N8) segment 4 (HA)2732.30.000000e+001631/1706 (95%)EPI573203A/chicken/Korea/H1292/2014 (A/H5N8) segment 4 (HA)2732.30.000000e+001632/1707 (95%)EPI573202A/chicken/Korea/H1268/2014 (A/H5N8) segment 4 (HA)2732.30.000000e+001631/1706 (95%)EPI573195A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)2732.30.000000e+001631/1706 (95%)EPI561619A/breeder duck/Korea/H200/2014 (A/H5N8) segment 4 (HA)2726.80.000000e+001630/1706 (95%)EPI573241A/breeder duck/Korea/H566/2014 (A/H5N8) segment 4 (HA)2721.20.000000e+001629/1706 (95%)EPI573204A/goose/Korea/H1296/2014 (A/H5N8) segment 4 (HA)2721.20.000000e+001629/1706 (95%)EPI573205A/Korean native chicken/Korea/H1299/2014 (A/H5N8) segment 4 (HA)2715.70.000000e+001628/1706 (95%)EPI573198A/broiler duck/Korea/H959/2014 (A/H5N8) segment 4 (HA)2715.70.000000e+001628/1706 (95%)EPI442001A/goose/Shandong/k1204/2009 (A/H5N5) segment 4 (HA)2715.70.000000e+001628/1706 (95%)EPI573218A/Korean native chicken/Korea/H1687/2014 (A/H5N8) segment 4 (HA)2710.20.000000e+001627/1706 (95%)EPI573217A/broiler duck/Korea/H1685/2014 (A/H5N8) segment 4 (HA)2710.20.000000e+001627/1706 (95%)EPI573216A/broiler duck/Korea/H1683/2014 (A/H5N8) segment 4 (HA)2710.20.000000e+001627/1706 (95%)EPI573212A/Korean native chicken/Korea/H1554/2014 (A/H5N8) segment 4 (HA)2710.20.000000e+001628/1707 (95%)EPI573211A/goose/Korea/H1545/2014 (A/H5N8) segment 4 (HA)2710.20.000000e+001628/1707 (95%)EPI573209A/broiler duck/Korea/H1413/2014 (A/H5N8) segment 4 (HA)2710.20.000000e+001627/1706 (95%)
  25. Isolate name: A/environment/GZ/75/2014 Isolate ID: EPI_ISL_202763 Passage details/history: E1 Type: A / H5N6 Lineage: Sample information Collection date: 2014-10-22 Host Environment Additional host information: Location: China Additional location information: Guangdong Institute information Originating lab: Center of Influenza Research, School of Public Health, Li Ka Shing Faculty of Medicine, the University of Hong Kong Sample ID given by the sample provider: Address: Center of Influenza Research, School of Public Health, Li Ka Shing Faculty of Medicine, the University of Hong Kong Sassoon, Pokfulam Hong Kong Hong Kong (SAR) Submitting lab: University of Hong Kong Sample ID given by the submitting laboratory: Authors: Zhou, Jie; Zeng, Xianqiao, Wu, Jia; Yen, Hui-Ling Address: University of Hong Kong School of Public Health 21 Sassoon Road Hong Kong Hong Kong (SAR) PublicationPublication In vivo antiviral resistance PhenotypeGenotypeUnspecifiedAntiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional informationAntigenic characterization: Note: Sequence segmentidentifierlengthaccession #INSDCSequence HA GZ75HA 1704 EPI676397 Submitter information Submitter: Zhou, Jay Submission Date: 2015-12-13 Last modifier: Zhou, Jay Last modified: 2015-12-13 Address: University of Hong Kong School of Public Health 21 Sassoon Road Hong Kong
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