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Pandemic Potentials Blog

niman

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  1. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman replied to niman's topic in Dr. Niman's Corner
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI576390A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 3 (PA)3973.30.000000e+002151/2151 (100%)EPI576385A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 3 (PA)3962.20.000000e+002149/2151 (99%)EPI552745A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 3 (PA)3945.60.000000e+002146/2151 (99%)EPI548429A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 3 (PA)3941.90.000000e+002145/2151 (99%)EPI558010A/duck/England/36038/14 (A/H5N8) segment 3 (PA)3940.00.000000e+002145/2151 (99%)EPI547672A/duck/England/36254/14 (A/H5N8) segment 3 (PA)3940.00.000000e+002145/2151 (99%)EPI573170A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI558003A/duck/England/36226/14 (A/H5N8) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI553184A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI548492A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI548484A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI547681A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI573186A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI573178A/duck/Netherlands/14015898/2014 (A/H5N8) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI573162A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI553361A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI548622A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI554601A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 3 (PA)3917.90.000000e+002141/2151 (99%)EPI555125A/domestic duck/Germany-NI/R3468/2014 (A/H5N8) segment 3 (PA)3912.30.000000e+002140/2151 (99%)EPI585536A/baikal teal/Korea/2414/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585535A/baikal teal/Korea/2406/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585531A/baikal teal/Korea/1458/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585530A/baikal teal/Korea/1457/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585528A/baikal teal/Korea/1454/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585525A/baikal teal/Korea/1448/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585524A/baikal teal/Korea/1447/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585523A/baikal teal/Korea/1446/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561712A/bean goose/Korea/H40/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561643A/tundra swan/Korea/H411/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561583A/broiler duck/Korea/H133/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561537A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561534A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561502A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561500A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561499A/bean goose/Korea/H53/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561338A/broiler duck/Korea/H49/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI561334A/broiler duck/Korea/H47/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI509694A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI585538A/baikal teal/Korea/2417/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI585537A/baikal teal/Korea/2416/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI585533A/baikal teal/Korea/2402/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI585532A/baikal teal/Korea/2399/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI585529A/baikal teal/Korea/1456/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561687A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561686A/common teal/Korea/H455-30/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561642A/bean goose/Korea/H328/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561640A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561588A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561587A/mallard/Korea/H207/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561586A/breeder duck/Korea/H200/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561584A/broiler duck/Korea/H145/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561582A/breeder duck/Korea/H128/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561501A/broiler duck/Korea/H65/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561335A/broiler duck/Korea/H48/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561333A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561193A/broiler duck/Korea/H31/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI561192A/broiler duck/Korea/H29/2014 (A/H5N8) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI585534A/baikal teal/Korea/2403/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002137/2152 (99%)EPI585527A/baikal teal/Korea/1452/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI585526A/baikal teal/Korea/1449/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI585522A/baikal teal/Korea/1445/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002137/2152 (99%)EPI585521A/baikal teal/Korea/1441/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI585520A/baikal teal/Korea/1437/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561641A/mallard/Korea/H297/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561639A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561585A/breeder duck/Korea/H158/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561539A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561538A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561536A/Coot/Korea/H81/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561535A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI561184A/waterfowl/Korea/S005/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI509693A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI573645A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI561638A/breeder duck/Korea/H249/2014 (A/H5N8) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI542618A/mallard/Korea/W452/2014 (A/H5N8) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI595141A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 3 (PA)3880.90.000000e+002134/2151 (99%)EPI595128A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI595119A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI595111A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI595102A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI595093A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI595081A/mandarin duck/Korea/K14-363-1/2014 (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI573663A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI573653A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI595065A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 3 (PA)3873.50.000000e+002133/2151 (99%)EPI595058A/common teal/Korea/KU-12/2015 (A/H5N8) segment 3 (PA)3868.00.000000e+002132/2151 (99%)EPI590468A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 3 (PA)3866.20.000000e+002111/2120 (99%)EPI585110A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 3 (PA)3866.20.000000e+002111/2120 (99%)EPI596245A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002109/2118 (99%)EPI595074A/mallard/Korea/N15-99/2015 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI553342A/chicken/Miyazaki/7/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI552775A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 3 (PA)3862.50.000000e+002109/2118 (99%)EPI542602A/duck/Beijing/FS01/2013 (A/H5N8) segment 3 (PA)3862.50.000000e+002129/2148 (99%)EPI596243A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002111/2122 (99%)EPI573671A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI552759A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002111/2122 (99%)EPI517160A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI573679A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 3 (PA)3851.40.000000e+002129/2151 (98%)EPI569389A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 3 (PA)3845.80.000000e+002128/2151 (98%)EPI543001A/duck/Beijing/FS01/2014 (A/H5N8) segment 3 (PA)3838.50.000000e+002124/2148 (98%)EPI587520A/American wigeon/BC/050-31/2015 (A/H5N8) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI586557A/chicken/BC/FAV25/2014 (A/H5N2) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI586541A/chicken/BC/FAV23/2014 (A/H5N2) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI586525A/chicken/BC/FAV21/2014 (A/H5N2) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI586508A/poultry/BC/FAV19/2014 (A/H5N2) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI569382A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI569370A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI569368A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI553207A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI596244A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 3 (PA)3832.90.000000e+002099/2111 (99%)EPI552767A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 3 (PA)3832.90.000000e+002099/2111 (99%)EPI588975A/duck/Taiwan/a068/2015 (A/H5N8) segment 3 (PA)3829.20.000000e+002123/2148 (98%)EPI588967A/chicken/Taiwan/a174/2015 (A/H5N3) segment 3 (PA)3829.20.000000e+002123/2148 (98%)EPI586533A/chicken/BC/FAV22/2014 (A/H5N2) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI586517A/chicken/BC/FAV20/2014 (A/H5N2) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI586500A/poultry/BC/FAV17/2014 (A/H5N2) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI585103A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI584078A/turkey/BC/FAV14/2014 (A/H5N2) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI576174A/chicken/BC/FAV9/2014 (A/H5N2) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI576173A/chicken/BC/FAV8/2014 (A/H5N2) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI543009A/duck/Beijing/CT01/2014 (A/H5N8) segment 3 (PA)3829.20.000000e+002122/2148 (98%)EPI590470A/chicken/Washington/3490-18/2015 (A/H5N2) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI588951A/goose/Taiwan/a015/2015 (A/H5N8) segment 3 (PA)3823.70.000000e+002122/2148 (98%)EPI586549A/chicken/BC/FAV24/2014 (A/H5N2) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI586492A/poultry/BC/FAV15/2014 (A/H5N2) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI573637A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI573292A/turkey/BC/FAV10/2014 (A/H5N2) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI569362A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI569360A/chicken/Washington/61-9/2014 (A/H5N2) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI590471A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 3 (PA)3818.10.000000e+002123/2151 (98%)EPI573280A/turkey/Washington/61-22/2014 (A/H5N2) segment 3 (PA)3818.10.000000e+002123/2151 (98%)EPI590475A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI590472A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI590469A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI585107A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI590473A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 3 (PA)3807.10.000000e+002121/2151 (98%)EPI620404A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI620403A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI620402A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI620401A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI620400A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI590476A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI590474A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI587639A/chicken/Iowa/04-20/2015 (A/H5N2) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI620399A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 3 (PA)3790.40.000000e+002118/2151 (98%)EPI620398A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 3 (PA)3790.40.000000e+002118/2151 (98%)EPI431447A/duck/Hebei/2/2011 (A/H5N2) segment 3 (PA)3757.20.000000e+002113/2152 (98%)EPI414237A/duck/Jiangsu/1-15/2011 (A/H4N2) segment 3 (PA)3718.40.000000e+002105/2151 (97%)EPI398961A/duck/Eastern China/1111/2011 (A/H5N2) segment 3 (PA)3701.80.000000e+002103/2152 (97%)EPI398962A/goose/Eastern China/1112/2011 (A/H5N2) segment 3 (PA)3629.80.000000e+002089/2151 (97%)EPI328887A/duck/Eastern China/108/2008 (A/H5N1) segment 3 (PA)3629.80.000000e+002089/2151 (97%)EPI328879A/duck/Eastern China/031/2009 (A/H5N5) segment 3 (PA)3618.70.000000e+002087/2151 (97%)EPI442024A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 3 (PA)3596.50.000000e+002083/2151 (96%)EPI493832A/duck/Guangdong/wy24/2008 (A/H5N5) segment 3 (PA)3591.00.000000e+002082/2151 (96%)EPI431455A/duck/Hebei/3/2011 (A/H5N2) segment 3 (PA)3574.40.000000e+002079/2151 (96%)EPI493816A/duck/Guangdong/wy11/2008 (A/H5N5) segment 3 (PA)3563.30.000000e+002077/2151 (96%)EPI493824A/duck/Guangdong/wy19/2008 (A/H5N5) segment 3 (PA)3552.20.000000e+002075/2151 (96%)EPI442008A/goose/Guangdong/k0103/2010 (A/H5N5) segment 3 (PA)3552.20.000000e+002075/2151 (96%)EPI442000A/goose/Shandong/k1204/2009 (A/H5N5) segment 3 (PA)3519.00.000000e+002069/2151 (96%)EPI399959A/duck/Jiangsu/m234/2012 (A/H5N2) segment 3 (PA)3513.40.000000e+002069/2152 (96%)EPI544891A/duck/Shandong/Q1/2013 (A/H5N8) segment 3 (PA)3502.40.000000e+002066/2151 (96%)EPI597674A/duck/Hunan/316/2005 (A/H5N1) segment 3 (PA)3496.80.000000e+002065/2151 (96%)EPI475578A/wild duck/Shandong/628/2011 (A/H5N1) segment 3 (PA)3496.80.000000e+002067/2153 (96%)EPI442016A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 3 (PA)3496.80.000000e+002045/2121 (96%)EPI127382A/wild duck/Hunan/021/2005 (A/H5N1) segment 3 (PA)3496.80.000000e+002065/2151 (96%)EPI227308A/Mallard/Huadong/lk/2005 (A/H5N1) segment 3 (PA)3480.20.000000e+002062/2151 (95%)EPI113022A/crested myna/Hong Kong/540/2006 (A/H5N1) segment 3 (PA)3480.20.000000e+002062/2151 (95%)EPI399885A/duck/HuBei/03/2010 (A/H5N5) segment 3 (PA)3463.60.000000e+002060/2152 (95%)EPI568391A/duck/Ningbo/3262/2013 (A/H0) segment 3 (PA)3452.50.000000e+002058/2152 (95%)EPI530983A/duck/Zhejiang/W24/2013 (A/H5N8) segment 3 (PA)3452.50.000000e+002059/2153 (95%)EPI337094A/Zhejiang/1/2006 (A/H5N1) segment 3 (PA)3441.40.000000e+002056/2152 (95%)EPI279945A/Zhejiang/1/2006 (A/H5N1) segment 3 (PA)3441.40.000000e+002056/2152 (95%)EPI591170A/duck/Jiangxi/23970/2013 (A/H0) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI507672A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI337063A/Anhui/2/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI337058A/Anhui/1/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI275385A/Anhui/2/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI225093A/duck/Nam Dinh/218/2006 (A/H5) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170671A/duck/Vietnam/208/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170655A/duck/Vietnam/210/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170648A/Muscovy duck/Vietnam/211/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170634A/Muscovy duck/Vietnam/213/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170620A/chicken/Vietnam/216/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170612A/Muscovy duck/Vietnam/217/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170604A/duck/Vietnam/218/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI170596A/duck/Vietnam/219/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI164247A/Anhui/2/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI164220A/Anhui/1/2005 (A/H5N1) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI139938A/Duck/Fujian/1734/05 (A/H5N1) segment 3 (PA)3435.90.000000e+002054/2151 (95%)EPI113110A/goose/Shantou/3265/2006 (A/H5N1) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI113100A/duck/Guiyang/497/2006 (A/H5N1) segment 3 (PA)3435.90.000000e+002055/2152 (95%)EPI577197A/duck/Shaoxing/5240/2013 (A/H0) segment 3 (PA)3430.30.000000e+002054/2152 (95%)EPI573516A/wildbird/Anhui/82/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002054/2152 (95%)EPI276021A/duck/Jiangxi/80/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002056/2154 (95%)EPI275981A/duck/Hubei/49/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002054/2152 (95%)EPI270187A/Vietnam/UT30850/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002051/2148 (95%)EPI170719A/chicken/Vietnam/202/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002053/2151 (95%)EPI170695A/duck/Vietnam/205/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002053/2151 (95%)EPI170679A/duck/Vietnam/207/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002053/2151 (95%)EPI170663A/chicken/Vietnam/209/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002053/2151 (95%)EPI170641A/chicken/Vietnam/212/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002053/2151 (95%)EPI113112A/goose/Shantou/3295/2006 (A/H5N1) segment 3 (PA)3430.30.000000e+002054/2152 (95%)EPI113102A/goose/Guiyang/538/2006 (A/H5N1) segment 3 (PA)3430.30.000000e+002054/2152 (95%)EPI113074A/duck/Guangxi/5457/2005 (A/H5N1) segment 3 (PA)3430.30.000000e+002053/2151 (95%)EPI275957A/duck/Anhui/1/06 (A/H5N1) segment 3 (PA)3426.70.000000e+002053/2152 (95%)EPI530984A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI509692A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI337140A/Anhui/1/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI337106A/Shanghai/1/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI337075A/Sichuan/2/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002054/2153 (95%)EPI280108A/Shanghai/1/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI280028A/Anhui/1/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI276045A/goose/Hubei/65/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI275773A/chicken/Hunan/21/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI227015A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI175649A/duck/Hubei/Hangmei01/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI170627A/duck/Vietnam/215/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI164237A/Sichuan/2/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002054/2153 (95%)EPI113254A/duck/Guiyang/1558/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI113160A/duck/Fujian/720/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI113158A/duck/Fujian/671/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI113126A/duck/Hunan/344/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002038/2130 (95%)EPI113124A/duck/Hunan/324/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002038/2130 (95%)EPI113122A/duck/Hunan/5472/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI113120A/duck/Hunan/5152/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113118A/duck/Hunan/5106/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113072A/goose/Guangxi/5414/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113068A/duck/Guangxi/5165/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113064A/chicken/Guangxi/4989/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113060A/goose/Guangxi/4513/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113058A/duck/Guangxi/4428/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113056A/goose/Guangxi/4289/2005 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113026A/little egret/Hong Kong/718/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002052/2151 (95%)EPI113024A/common magpie/Hong Kong/645/2006 (A/H5N1) segment 3 (PA)3424.80.000000e+002053/2152 (95%)EPI337082A/Sichuan/1/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002053/2153 (95%)EPI280100A/Guangdong/1/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002052/2152 (95%)EPI275869A/chicken/Sichuan/81/2005 (A/H5N1) segment 3 (PA)3419.30.000000e+002052/2152 (95%)EPI275377A/Anhui/1/2005 (A/H5N1) segment 3 (PA)3419.30.000000e+002052/2152 (95%)EPI164229A/Sichuan/1/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002053/2153 (95%)EPI113298A/chicken/Fujian/12239/2005 (A/H5N1) segment 3 (PA)3419.30.000000e+002051/2151 (95%)EPI113244A/chicken/Guiyang/3923/2005 (A/H5N1) segment 3 (PA)3419.30.000000e+002052/2152 (95%)EPI113156A/duck/Fujian/668/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002052/2152 (95%)EPI113098A/duck/Guiyang/293/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002052/2152 (95%)EPI113096A/chicken/Guiyang/29/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002051/2151 (95%)EPI113092A/chicken/Guiyang/3721/2005 (A/H5N1) segment 3 (PA)3419.30.000000e+002052/2152 (95%)EPI113076A/duck/Guangxi/150/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002051/2151 (95%)EPI113070A/duck/Guangxi/5270/2005 (A/H5N1) segment 3 (PA)3419.30.000000e+002051/2151 (95%)EPI113018A/chicken/Hong Kong/282/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002051/2151 (95%)EPI110458A/human/Zhejiang/16/2006 (A/H5N1) segment 3 (PA)3419.30.000000e+002054/2154 (95%)EPI561498A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 3 (PA)3413.70.000000e+002051/2152 (95%)

  2. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman replied to niman's topic in Dr. Niman's Corner
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI576389A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 2 (PB1)4217.00.000000e+002283/2283 (100%)EPI576386A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 2 (PB1)4217.00.000000e+002283/2283 (100%)EPI552744A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 2 (PB1)4205.90.000000e+002281/2283 (99%)EPI548430A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 2 (PB1)4205.90.000000e+002281/2283 (99%)EPI573177A/duck/Netherlands/14015898/2014 (A/H5N8) segment 2 (PB1)4200.40.000000e+002280/2283 (99%)EPI558009A/duck/England/36038/14 (A/H5N8) segment 2 (PB1)4200.40.000000e+002280/2283 (99%)EPI558002A/duck/England/36226/14 (A/H5N8) segment 2 (PB1)4200.40.000000e+002280/2283 (99%)EPI547671A/duck/England/36254/14 (A/H5N8) segment 2 (PB1)4200.40.000000e+002280/2283 (99%)EPI580263A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 2 (PB1)4194.90.000000e+002279/2283 (99%)EPI548621A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 2 (PB1)4194.90.000000e+002279/2283 (99%)EPI547680A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 2 (PB1)4194.90.000000e+002279/2283 (99%)EPI579005A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 2 (PB1)4189.30.000000e+002278/2283 (99%)EPI554600A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 2 (PB1)4189.30.000000e+002278/2283 (99%)EPI553360A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 2 (PB1)4189.30.000000e+002278/2283 (99%)EPI573161A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 2 (PB1)4183.80.000000e+002277/2283 (99%)EPI548491A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 2 (PB1)4183.80.000000e+002277/2283 (99%)EPI548483A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 2 (PB1)4183.80.000000e+002277/2283 (99%)EPI585569A/baikal teal/Korea/1458/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI585565A/baikal teal/Korea/1452/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI585564A/baikal teal/Korea/1449/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI585561A/baikal teal/Korea/1446/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI585559A/baikal teal/Korea/1441/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561666A/mallard/Korea/H297/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561659A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561645A/breeder duck/Korea/H249/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561611A/breeder duck/Korea/H158/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561604A/broiler duck/Korea/H145/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561597A/broiler duck/Korea/H133/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561590A/breeder duck/Korea/H128/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561562A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561528A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561347A/broiler duck/Korea/H47/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561340A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561202A/broiler duck/Korea/H31/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI561195A/broiler duck/Korea/H29/2014 (A/H5N8) segment 2 (PB1)4178.20.000000e+002276/2283 (99%)EPI585576A/baikal teal/Korea/2417/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585575A/baikal teal/Korea/2416/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585573A/baikal teal/Korea/2406/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585572A/baikal teal/Korea/2403/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585568A/baikal teal/Korea/1457/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585566A/baikal teal/Korea/1454/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585563A/baikal teal/Korea/1448/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585562A/baikal teal/Korea/1447/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI585560A/baikal teal/Korea/1445/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561703A/bean goose/Korea/H40/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561689A/common teal/Korea/H455-30/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561625A/mallard/Korea/H207/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561618A/breeder duck/Korea/H200/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561569A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561555A/Coot/Korea/H81/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561541A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561514A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561337A/broiler duck/Korea/H48/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI509708A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 2 (PB1)4172.70.000000e+002275/2283 (99%)EPI561186A/waterfowl/Korea/S005/2014 (A/H5N8) segment 2 (PB1)4170.90.000000e+002274/2283 (99%)EPI585570A/baikal teal/Korea/2399/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002274/2283 (99%)EPI585567A/baikal teal/Korea/1456/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002274/2283 (99%)EPI561696A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002274/2283 (99%)EPI561680A/tundra swan/Korea/H411/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002274/2283 (99%)EPI561548A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002274/2283 (99%)EPI561521A/broiler duck/Korea/H65/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002274/2283 (99%)EPI561359A/broiler duck/Korea/H49/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002274/2283 (99%)EPI542631A/mallard/Korea/W452/2014 (A/H5N8) segment 2 (PB1)4167.20.000000e+002270/2277 (99%)EPI585574A/baikal teal/Korea/2414/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002273/2283 (99%)EPI585571A/baikal teal/Korea/2402/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002273/2283 (99%)EPI585558A/baikal teal/Korea/1437/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002273/2283 (99%)EPI561652A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002273/2283 (99%)EPI561632A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002273/2283 (99%)EPI561576A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002273/2283 (99%)EPI553185A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002266/2275 (99%)EPI509703A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 2 (PB1)4161.60.000000e+002273/2283 (99%)EPI561673A/bean goose/Korea/H328/2014 (A/H5N8) segment 2 (PB1)4156.10.000000e+002272/2283 (99%)EPI561507A/bean goose/Korea/H53/2014 (A/H5N8) segment 2 (PB1)4156.10.000000e+002272/2283 (99%)EPI517159A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 2 (PB1)4156.10.000000e+002272/2283 (99%)EPI595126A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 2 (PB1)4145.00.000000e+002271/2284 (99%)EPI595118A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 2 (PB1)4145.00.000000e+002271/2284 (99%)EPI595110A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 2 (PB1)4145.00.000000e+002271/2284 (99%)EPI595101A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 2 (PB1)4145.00.000000e+002271/2284 (99%)EPI595140A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 2 (PB1)4141.30.000000e+002270/2284 (99%)EPI595092A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 2 (PB1)4139.50.000000e+002270/2284 (99%)EPI573644A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 2 (PB1)4139.50.000000e+002270/2284 (99%)EPI543000A/duck/Beijing/FS01/2014 (A/H5N8) segment 2 (PB1)4135.80.000000e+002262/2274 (99%)EPI595073A/mallard/Korea/N15-99/2015 (A/H5N8) segment 2 (PB1)4133.90.000000e+002269/2284 (99%)EPI595064A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 2 (PB1)4133.90.000000e+002269/2284 (99%)EPI573652A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 2 (PB1)4133.90.000000e+002269/2284 (99%)EPI553341A/chicken/Miyazaki/7/2014 (A/H5N8) segment 2 (PB1)4133.90.000000e+002269/2284 (99%)EPI573670A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 2 (PB1)4128.40.000000e+002267/2283 (99%)EPI573662A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 2 (PB1)4128.40.000000e+002268/2284 (99%)EPI595057A/common teal/Korea/KU-12/2015 (A/H5N8) segment 2 (PB1)4122.80.000000e+002267/2284 (99%)EPI590678A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 2 (PB1)4122.80.000000e+002238/2241 (99%)EPI585109A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 2 (PB1)4122.80.000000e+002238/2241 (99%)EPI596300A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 2 (PB1)4119.10.000000e+002240/2245 (99%)EPI573636A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 2 (PB1)4119.10.000000e+002265/2283 (99%)EPI552774A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 2 (PB1)4119.10.000000e+002240/2245 (99%)EPI573678A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 2 (PB1)4106.20.000000e+002259/2277 (99%)EPI569388A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 2 (PB1)4106.20.000000e+002263/2283 (99%)EPI543008A/duck/Beijing/CT01/2014 (A/H5N8) segment 2 (PB1)4104.40.000000e+002256/2274 (99%)EPI587526A/American wigeon/BC/050-31/2015 (A/H5N8) segment 2 (PB1)4095.10.000000e+002257/2277 (99%)EPI569375A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 2 (PB1)4095.10.000000e+002261/2283 (99%)EPI569371A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 2 (PB1)4095.10.000000e+002261/2283 (99%)EPI553206A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 2 (PB1)4095.10.000000e+002259/2280 (99%)EPI585082A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 2 (PB1)4078.50.000000e+002258/2283 (98%)EPI542598A/duck/Beijing/FS01/2013 (A/H5N8) segment 2 (PB1)4076.70.000000e+002229/2240 (99%)EPI596294A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 2 (PB1)4052.70.000000e+002198/2200 (99%)EPI552766A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 2 (PB1)4052.70.000000e+002198/2200 (99%)EPI431446A/duck/Hebei/2/2011 (A/H5N2) segment 2 (PB1)4012.00.000000e+002246/2283 (98%)EPI596288A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 2 (PB1)4010.20.000000e+002179/2183 (99%)EPI552758A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 2 (PB1)4010.20.000000e+002179/2183 (99%)EPI414236A/duck/Jiangsu/1-15/2011 (A/H4N2) segment 2 (PB1)4001.00.000000e+002245/2284 (98%)EPI398957A/duck/Eastern China/1111/2011 (A/H5N2) segment 2 (PB1)3973.30.000000e+002236/2278 (98%)EPI398958A/goose/Eastern China/1112/2011 (A/H5N2) segment 2 (PB1)3906.80.000000e+002226/2280 (97%)EPI328880A/duck/Eastern China/031/2009 (A/H5N5) segment 2 (PB1)3901.20.000000e+002226/2283 (97%)EPI328872A/duck/Eastern China/008/2008 (A/H5N5) segment 2 (PB1)3901.20.000000e+002227/2284 (97%)EPI328896A/duck/Eastern China/909/2009 (A/H5N1) segment 2 (PB1)3884.60.000000e+002223/2283 (97%)EPI442007A/goose/Guangdong/k0103/2010 (A/H5N5) segment 2 (PB1)3862.50.000000e+002220/2284 (97%)EPI441999A/goose/Shandong/k1204/2009 (A/H5N5) segment 2 (PB1)3845.80.000000e+002217/2284 (97%)EPI493815A/duck/Guangdong/wy11/2008 (A/H5N5) segment 2 (PB1)3799.70.000000e+002207/2282 (96%)EPI493823A/duck/Guangdong/wy19/2008 (A/H5N5) segment 2 (PB1)3788.60.000000e+002205/2282 (96%)EPI493831A/duck/Guangdong/wy24/2008 (A/H5N5) segment 2 (PB1)3783.10.000000e+002204/2282 (96%)EPI243255A/R(duck/Mongolia/54/01-duck/Mongolia/47/01) (A/H5N1) segment 2 (PB1)3685.20.000000e+002187/2283 (95%)EPI3417A/duck/Mongolia/54/01 (A/H5N2) segment 2 (PB1)3679.60.000000e+002186/2283 (95%)EPI1646A/duck/Hokkaido/Vac-1/04 (A/H5N1) segment 2 (PB1)3679.60.000000e+002186/2283 (95%)EPI174878A/mallard/Denmark/77-64849-G2/2005 (A/H1N3) segment 2 (PB1)3618.70.000000e+002175/2283 (95%)EPI414136A/duck/Jiangsu/26/2004 (A/H3N2) segment 2 (PB1)3602.10.000000e+002173/2284 (95%)EPI181959A/mallard/Netherlands/3/2005 (A/H3N8) segment 2 (PB1)3596.50.000000e+002171/2283 (95%)EPI296269A/wild duck/Korea/YS44/2004 (A/H1N2) segment 2 (PB1)3591.00.000000e+002162/2271 (95%)EPI372518A/garganey/Ukraine/05839-NAMRU3/2006 (A/H14N6) segment 2 (PB1)3585.50.000000e+002161/2271 (95%)EPI140270A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 2 (PB1)3585.50.000000e+002164/2275 (95%)EPI514603A/mallard/Sweden/50108/2006 (A/H4N6) segment 2 (PB1)3574.40.000000e+002167/2283 (94%)EPI461809A/environment/Hunan/S4350/2011 (A/H3N8) segment 2 (PB1)3568.80.000000e+002160/2273 (95%)EPI190362A/gadwall/Netherlands/1/2006 (A/H9N2) segment 2 (PB1)3568.80.000000e+002166/2283 (94%)EPI296534A/mallard/Netherlands/4/2006 (A/H10N6) segment 2 (PB1)3559.60.000000e+002158/2273 (94%)EPI140266A/migratory duck/Hong Kong/MPS180/2003 (A/H4N6) segment 2 (PB1)3541.10.000000e+002162/2284 (94%)EPI140268A/migratory duck/Hong Kong/MP2553/2003 (A/H8N4) segment 2 (PB1)3539.30.000000e+002154/2273 (94%)EPI251806A/mallard/Sweden/81/2002 (A/H6N1) segment 2 (PB1)3535.60.000000e+002161/2284 (94%)EPI169687A/duck/Mongolia/47/01 (A/H7N1) segment 2 (PB1)3535.60.000000e+002161/2284 (94%)EPI447400A/mallard/Italy/3401/2005 (A/H5N1) segment 2 (PB1)3530.10.000000e+002160/2284 (94%)EPI447390A/mallard/Italy/3401/2005 (A/H5N1) segment 2 (PB1)3530.10.000000e+002160/2284 (94%)EPI447376A/mallard/Italy/3401/2005 (A/H5N1) segment 2 (PB1)3530.10.000000e+002160/2284 (94%)EPI447365A/mallard/Italy/3401/2005 (A/H5N1) segment 2 (PB1)3530.10.000000e+002160/2284 (94%)EPI60381A/mallard/Italy/3401/2005 (A/H5N1) segment 2 (PB1)3530.10.000000e+002160/2284 (94%)EPI618950A/mallard/Sweden/223/2002 (A/H10N2) segment 2 (PB1)3519.00.000000e+002158/2284 (94%)EPI475577A/wild duck/Shandong/628/2011 (A/H5N1) segment 2 (PB1)3519.00.000000e+002160/2286 (94%)EPI442015A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 2 (PB1)3513.40.000000e+002155/2280 (94%)EPI251623A/mallard/Netherlands/1/1999 (A/H4N6) segment 2 (PB1)3513.40.000000e+002157/2284 (94%)EPI619210A/mallard/Sweden/4486/2004 (A/H8N4) segment 2 (PB1)3507.90.000000e+002156/2284 (94%)EPI514938A/mallard/Sweden/622/2002 (A/H4N6) segment 2 (PB1)3507.90.000000e+002156/2284 (94%)EPI514803A/mallard/Sweden/3272/2003 (A/H4N6) segment 2 (PB1)3507.90.000000e+002155/2283 (94%)EPI485717A/mallard/Sweden/111/2002 (A/H2N6) segment 2 (PB1)3507.90.000000e+002156/2284 (94%)EPI377900A/mallard/Sweden/73/2005 (A/H2N3) segment 2 (PB1)3507.90.000000e+002156/2284 (94%)EPI377755A/mallard/Sweden/112/2002 (A/H2N7) segment 2 (PB1)3507.90.000000e+002156/2284 (94%)EPI377743A/mallard/Sweden/111/2002 (A/H2N7) segment 2 (PB1)3507.90.000000e+002156/2284 (94%)EPI617101A/mallard/Sweden/1682/2002 (A/H7N7) segment 2 (PB1)3502.40.000000e+002156/2285 (94%)EPI617086A/mallard/Sweden/1681/2002 (A/H7N7) segment 2 (PB1)3502.40.000000e+002156/2285 (94%)EPI617072A/mallard/Sweden/1678/2002 (A/H7N7) segment 2 (PB1)3502.40.000000e+002156/2285 (94%)EPI617045A/mallard/Sweden/1628/2002 (A/H7N7) segment 2 (PB1)3502.40.000000e+002156/2285 (94%)EPI485656A/mallard/Sweden/102/2002 (A/H7N7) segment 2 (PB1)3502.40.000000e+002156/2285 (94%)EPI377834A/mallard/Sweden/84/2003 (A/H2N3) segment 2 (PB1)3502.40.000000e+002155/2284 (94%)EPI377811A/northern pintail/Sweden/1/2003 (A/H2N3) segment 2 (PB1)3502.40.000000e+002155/2284 (94%)EPI251834A/northern pintail/Sweden/1/2003 (A/H2N3) segment 2 (PB1)3502.40.000000e+002155/2284 (94%)EPI174851A/duck/Denmark/75-65472-P34/2003 (A/H3N8) segment 2 (PB1)3502.40.000000e+002154/2284 (94%)EPI377787A/mallard/Sweden/33/2002 (A/H2N3) segment 2 (PB1)3496.80.000000e+002153/2283 (94%)EPI377779A/mallard/Sweden/32/2002 (A/H2N3) segment 2 (PB1)3496.80.000000e+002153/2283 (94%)EPI377716A/mallard/Sweden/109/2002 (A/H2N7) segment 2 (PB1)3496.80.000000e+002154/2284 (94%)EPI377614A/white fronted goose/Netherlands/22/1999 (A/H2N2) segment 2 (PB1)3496.80.000000e+002154/2284 (94%)EPI251711A/mallard/Sweden/45/2002 (A/H11N8) segment 2 (PB1)3496.80.000000e+002154/2284 (94%)EPI222077A/gadwall/Altai/1328/2007 (A/H3N8) segment 2 (PB1)3496.80.000000e+002150/2278 (94%)EPI222069A/gadwall/Altai/1326/2007 (A/H3N8) segment 2 (PB1)3496.80.000000e+002150/2278 (94%)EPI600837A/duck/Jiangxi/2039/2005 (A/H10N8) segment 2 (PB1)3491.30.000000e+002149/2278 (94%)EPI377819A/mallard/Sweden/12/2003 (A/H2N3) segment 2 (PB1)3491.30.000000e+002154/2285 (94%)EPI372464A/teal/Egypt/01351-NAMRU3/2007 (A/H1N1) segment 2 (PB1)3491.30.000000e+002146/2273 (94%)EPI222053A/gadwall/Altai/1324/2007 (A/H3N8) segment 2 (PB1)3491.30.000000e+002149/2278 (94%)EPI618172A/mallard/Sweden/885/2002 (A/H7N7) segment 2 (PB1)3485.70.000000e+002153/2285 (94%)EPI485834A/mallard/Sweden/56/2002 (A/H7N7) segment 2 (PB1)3485.70.000000e+002153/2285 (94%)EPI485634A/mallard/Sweden/91/2002 (A/H7N9) segment 2 (PB1)3485.70.000000e+002153/2285 (94%)EPI485627A/mallard/Sweden/21/2002 (A/H5N2) segment 2 (PB1)3485.70.000000e+002151/2283 (94%)EPI377827A/mallard/Sweden/81/2003 (A/H2N3) segment 2 (PB1)3485.70.000000e+002148/2278 (94%)EPI296598A/Eurasian wigeon/Netherlands/4/2007 (A/H10N1) segment 2 (PB1)3485.70.000000e+002152/2284 (94%)EPI251748A/mallard/Sweden/55/2002 (A/H11N2) segment 2 (PB1)3485.70.000000e+002152/2284 (94%)EPI236198A/mallard/Sweden/56/2002 (A/H7N7) segment 2 (PB1)3485.70.000000e+002153/2285 (94%)EPI236184A/mallard/Sweden/21/2002 (A/H5N2) segment 2 (PB1)3485.70.000000e+002151/2283 (94%)EPI174856A/mallard/Denmark/74-08216/2002 (A/H2N3) segment 2 (PB1)3485.70.000000e+002151/2283 (94%)EPI618659A/mallard/Sweden/418/2002 (A/H11N9) segment 2 (PB1)3480.20.000000e+002150/2283 (94%)EPI514917A/mallard/Sweden/274/2002 (A/H4N2) segment 2 (PB1)3480.20.000000e+002150/2283 (94%)EPI431454A/duck/Hebei/3/2011 (A/H5N2) segment 2 (PB1)3480.20.000000e+002152/2285 (94%)EPI377940A/mallard/Sweden/5/2005 (A/H2N3) segment 2 (PB1)3480.20.000000e+002151/2284 (94%)EPI269135A/duck/Fujian/12035/2005 (A/H6N6) segment 2 (PB1)3480.20.000000e+002147/2278 (94%)EPI268990A/mallard/Jiangxi/227/2003 (A/H6N1) segment 2 (PB1)3480.20.000000e+002147/2278 (94%)EPI222061A/gadwall/Altai/1325/2007 (A/H3N8) segment 2 (PB1)3480.20.000000e+002147/2278 (94%)EPI619008A/mallard/Sweden/770/2002 (A/H10N6) segment 2 (PB1)3474.70.000000e+002150/2284 (94%)EPI618996A/mallard/Sweden/768/2002 (A/H10N6) segment 2 (PB1)3474.70.000000e+002150/2284 (94%)EPI618981A/mallard/Sweden/766/2002 (A/H0) segment 2 (PB1)3474.70.000000e+002150/2284 (94%)EPI251706A/mallard/Sweden/41/2002 (A/H10N6) segment 2 (PB1)3474.70.000000e+002150/2284 (94%)EPI485533A/mallard/Sweden/43/2002 (A/H10N5) segment 2 (PB1)3471.00.000000e+002149/2284 (94%)EPI618186A/mallard/Sweden/1337/2002 (A/H7N7) segment 2 (PB1)3469.10.000000e+002149/2284 (94%)EPI514269A/mallard/Sweden/52299/2006 (A/H4N6) segment 2 (PB1)3469.10.000000e+002149/2284 (94%)EPI485662A/mallard/Sweden/85/2002 (A/H7N7) segment 2 (PB1)3469.10.000000e+002149/2284 (94%)EPI275158A/glaucous gull/Alaska/44199-097/2006 (A/H13N3) segment 2 (PB1)3469.10.000000e+002148/2283 (94%)EPI236214A/mallard/Sweden/85/2002 (A/H7N7) segment 2 (PB1)3469.10.000000e+002149/2284 (94%)EPI485522A/whitefronted goose/Netherlands/22/1999 (A/H2N2) segment 2 (PB1)3463.60.000000e+002132/2260 (94%)EPI377670A/mallard/Sweden/88/2002 (A/H2N1) segment 2 (PB1)3463.60.000000e+002150/2286 (94%)EPI230019A/ruddy shelduck/Mongolia/37/2005 (A/H12N3) segment 2 (PB1)3463.60.000000e+002149/2285 (94%)EPI229925A/bar headed goose/Mongolia/143/2005 (A/H12N3) segment 2 (PB1)3463.60.000000e+002149/2285 (94%)EPI226676A/Eurasian wigeon/Netherlands/3/2005 (A/H9N2) segment 2 (PB1)3463.60.000000e+002147/2283 (94%)EPI174838A/duck/Denmark/75-65472-P24/2003 (A/H3N6) segment 2 (PB1)3463.60.000000e+002147/2283 (94%)EPI618965A/mallard/Sweden/737/2002 (A/H10N2) segment 2 (PB1)3458.00.000000e+002146/2283 (93%)EPI618939A/mallard/Sweden/831/2002 (A/H10N2) segment 2 (PB1)3458.00.000000e+002146/2283 (93%)EPI618055A/mallard/Sweden/6869/2004 (A/H0) segment 2 (PB1)3458.00.000000e+002138/2271 (94%)EPI514893A/mallard/Sweden/1616/2002 (A/H4N6) segment 2 (PB1)3458.00.000000e+002148/2285 (94%)EPI514886A/mallard/Sweden/1544/2002 (A/H4N6) segment 2 (PB1)3458.00.000000e+002148/2285 (94%)EPI514834A/mallard/Sweden/1705/2002 (A/H4N6) segment 2 (PB1)3458.00.000000e+002148/2285 (94%)EPI514827A/mallard/Sweden/1677/2002 (A/H4N6) segment 2 (PB1)3458.00.000000e+002148/2285 (94%)EPI514813A/mallard/Sweden/1656/2002 (A/H4N6) segment 2 (PB1)3458.00.000000e+002148/2285 (94%)EPI230037A/whooper swan/Mongolia/232/2005 (A/H12N3) segment 2 (PB1)3458.00.000000e+002148/2285 (94%)EPI230027A/ruddy shelduck/Mongolia/P52/2005 (A/H12N3) segment 2 (PB1)3458.00.000000e+002148/2285 (94%)EPI619015A/mallard/Sweden/4411/2004 (A/H10N4) segment 2 (PB1)3452.50.000000e+002145/2283 (93%)EPI619005A/mallard/Sweden/4401/2004 (A/H10N4) segment 2 (PB1)3452.50.000000e+002145/2283 (93%)EPI514987A/mallard/Sweden/4639/2004 (A/H0) segment 2 (PB1)3452.50.000000e+002145/2283 (93%)EPI514820A/mallard/Sweden/1665/2002 (A/H4N6) segment 2 (PB1)3452.50.000000e+002147/2285 (93%)EPI377803A/mallard/Sweden/70/2002 (A/H2N3) segment 2 (PB1)3452.50.000000e+002144/2280 (94%)EPI514775A/mallard/Sweden/2120/2003 (A/H4N6) segment 2 (PB1)3447.00.000000e+002144/2283 (93%)EPI514768A/mallard/Sweden/2101/2003 (A/H4N6) segment 2 (PB1)3447.00.000000e+002144/2283 (93%)EPI514757A/mallard/Sweden/5640/2005 (A/H4N6) segment 2 (PB1)3447.00.000000e+002145/2284 (93%)EPI514729A/mallard/Sweden/3374/2003 (A/H4N6) segment 2 (PB1)3447.00.000000e+002144/2283 (93%)EPI372526A/teal/Egypt/00677-NAMRU3/2004 (A/H1N1) segment 2 (PB1)3447.00.000000e+002138/2273 (94%)EPI269150A/duck/Hunan/1469/2002 (A/H6N8) segment 2 (PB1)3447.00.000000e+002142/2279 (93%)EPI227369A/mallard/Yan chen/2005 (A/H4N6) segment 2 (PB1)3447.00.000000e+002145/2284 (93%)EPI169701A/duck/Mongolia/867/2002 (A/H7N1) segment 2 (PB1)3447.00.000000e+002145/2284 (93%)EPI222085A/garganey/Altai/1213/2007 (A/H5N2) segment 2 (PB1)3441.40.000000e+002140/2278 (93%)EPI222045A/gadwall/Altai/1202/2007 (A/H5N2) segment 2 (PB1)3441.40.000000e+002140/2278 (93%)EPI377646A/mallard/Netherlands/14/2001 (A/H2N3) segment 2 (PB1)3435.90.000000e+002144/2285 (93%)EPI573159A/Ostrich/Netherlands/03006814/2003 (A/H2N3) segment 2 (PB1)3432.20.000000e+002142/2284 (93%)EPI618953A/mallard/Sweden/948/2002 (A/H10N9) segment 2 (PB1)3430.30.000000e+002141/2283 (93%)EPI618118A/mallard/Sweden/936/2002 (A/H10N9) segment 2 (PB1)3430.30.000000e+002141/2283 (93%)EPI251783A/mallard/Sweden/65/2002 (A/H10N9) segment 2 (PB1)3430.30.000000e+002141/2283 (93%)EPI314237A/wild duck/Taiwan/WB306/2002 (A/H4N6) segment 2 (PB1)3423.00.000000e+002039/2132 (95%)EPI561494A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 2 (PB1)3419.30.000000e+002141/2285 (93%)EPI544890A/duck/Shandong/Q1/2013 (A/H5N8) segment 2 (PB1)3419.30.000000e+002133/2273 (93%)EPI229979A/duck/France/080032/2008 (A/H5N2) segment 2 (PB1)3419.30.000000e+002136/2278 (93%)EPI326772A/environment/Korea/KCA16/2004 (A/H3N8) segment 2 (PB1)3415.60.000000e+002122/2257 (94%)EPI229956A/duck/France/02166/2002 (A/H5N3) segment 2 (PB1)3413.70.000000e+002140/2285 (93%)EPI102521A/duck/Taiwan/A68/03 (A/H6N1) segment 2 (PB1)3413.70.000000e+002141/2286 (93%)EPI509697A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 2 (PB1)3408.20.000000e+002140/2286 (93%)EPI377924A/mallard/Sweden/103/2005 (A/H2N9) segment 2 (PB1)3408.20.000000e+002139/2285 (93%)EPI296479A/mallard/Netherlands/30/2006 (A/H1N4) segment 2 (PB1)3408.20.000000e+002139/2285 (93%)EPI602036A/duck/Ningbo/3262/2013 (A/H0) segment 2 (PB1)3402.60.000000e+002130/2273 (93%)EPI527647A/red-crested pochard/Mongolia/463V/2009 (A/H3N1) segment 2 (PB1)3402.60.000000e+002137/2284 (93%)EPI178499A/Duck/Italy/268302/2004 (A/H10N4) segment 2 (PB1)3402.60.000000e+002137/2284 (93%)EPI530981A/duck/Zhejiang/W24/2013 (A/H5N8) segment 2 (PB1)3397.10.000000e+002130/2274 (93%)EPI583869A/duck/Shaoxing/5240/2013 (A/H0) segment 2 (PB1)3391.60.000000e+002128/2273 (93%)

  3. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman replied to niman's topic in Dr. Niman's Corner
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI576396A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 1 (PB2)4207.80.000000e+002280/2280 (100%)EPI576387A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 1 (PB2)4204.10.000000e+002278/2280 (99%)EPI552743A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 1 (PB2)4185.60.000000e+002275/2280 (99%)EPI573160A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 1 (PB2)4180.10.000000e+002274/2280 (99%)EPI573176A/duck/Netherlands/14015898/2014 (A/H5N8) segment 1 (PB2)4169.00.000000e+002272/2280 (99%)EPI573169A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 1 (PB2)4169.00.000000e+002272/2280 (99%)EPI547679A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 1 (PB2)4169.00.000000e+002272/2280 (99%)EPI573185A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 1 (PB2)4163.50.000000e+002271/2280 (99%)EPI548620A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 1 (PB2)4163.50.000000e+002271/2280 (99%)EPI547670A/duck/England/36254/14 (A/H5N8) segment 1 (PB2)4163.50.000000e+002271/2280 (99%)EPI558008A/duck/England/36038/14 (A/H5N8) segment 1 (PB2)4157.90.000000e+002270/2280 (99%)EPI558001A/duck/England/36226/14 (A/H5N8) segment 1 (PB2)4157.90.000000e+002270/2280 (99%)EPI548490A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 1 (PB2)4157.90.000000e+002270/2280 (99%)EPI548482A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 1 (PB2)4157.90.000000e+002270/2280 (99%)EPI585550A/baikal teal/Korea/1458/2014 (A/H5N8) segment 1 (PB2)4146.80.000000e+002268/2280 (99%)EPI585546A/baikal teal/Korea/1452/2014 (A/H5N8) segment 1 (PB2)4146.80.000000e+002268/2280 (99%)EPI585545A/baikal teal/Korea/1449/2014 (A/H5N8) segment 1 (PB2)4146.80.000000e+002268/2280 (99%)EPI561513A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 1 (PB2)4146.80.000000e+002268/2280 (99%)EPI585557A/baikal teal/Korea/2417/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI585556A/baikal teal/Korea/2416/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI585553A/baikal teal/Korea/2403/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI585543A/baikal teal/Korea/1447/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI585542A/baikal teal/Korea/1446/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI585541A/baikal teal/Korea/1445/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI585540A/baikal teal/Korea/1441/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561702A/bean goose/Korea/H40/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561679A/tundra swan/Korea/H411/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561672A/bean goose/Korea/H328/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561631A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561624A/mallard/Korea/H207/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561596A/broiler duck/Korea/H133/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561568A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561554A/Coot/Korea/H81/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561547A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561540A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561527A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561506A/bean goose/Korea/H53/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561358A/broiler duck/Korea/H49/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561346A/broiler duck/Korea/H47/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561201A/broiler duck/Korea/H31/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561194A/broiler duck/Korea/H29/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI561185A/waterfowl/Korea/S005/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI553359A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI542630A/mallard/Korea/W452/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI509707A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI509702A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 1 (PB2)4141.30.000000e+002267/2280 (99%)EPI596299A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002250/2256 (99%)EPI585554A/baikal teal/Korea/2406/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI585551A/baikal teal/Korea/2399/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI585548A/baikal teal/Korea/1456/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI585547A/baikal teal/Korea/1454/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI585544A/baikal teal/Korea/1448/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI585539A/baikal teal/Korea/1437/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561695A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561658A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561617A/breeder duck/Korea/H200/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561610A/breeder duck/Korea/H158/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561603A/broiler duck/Korea/H145/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561575A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561561A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561353A/broiler duck/Korea/H48/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI561339A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002267/2281 (99%)EPI552773A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002250/2256 (99%)EPI517158A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 1 (PB2)4135.80.000000e+002266/2280 (99%)EPI585555A/baikal teal/Korea/2414/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI585549A/baikal teal/Korea/1457/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI561688A/common teal/Korea/H455-30/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI561665A/mallard/Korea/H297/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI561651A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI561644A/breeder duck/Korea/H249/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI561589A/breeder duck/Korea/H128/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI561520A/broiler duck/Korea/H65/2014 (A/H5N8) segment 1 (PB2)4130.20.000000e+002265/2280 (99%)EPI553186A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 1 (PB2)4108.10.000000e+002246/2258 (99%)EPI595056A/common teal/Korea/KU-12/2015 (A/H5N8) segment 1 (PB2)4097.00.000000e+002259/2280 (99%)EPI569380A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 1 (PB2)4091.40.000000e+002258/2280 (99%)EPI553340A/chicken/Miyazaki/7/2014 (A/H5N8) segment 1 (PB2)4091.40.000000e+002258/2280 (99%)EPI590677A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 1 (PB2)4087.80.000000e+002229/2238 (99%)EPI585108A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 1 (PB2)4087.80.000000e+002229/2238 (99%)EPI543007A/duck/Beijing/CT01/2014 (A/H5N8) segment 1 (PB2)4087.80.000000e+002254/2277 (98%)EPI595139A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI595125A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI595117A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI595109A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI595099A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI595090A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI595088A/mandarin duck/Korea/K14-363-1/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI586531A/chicken/BC/FAV22/2014 (A/H5N2) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI586498A/poultry/BC/FAV17/2014 (A/H5N2) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI586490A/poultry/BC/FAV15/2014 (A/H5N2) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI585081A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI573296A/turkey/BC/FAV10/2014 (A/H5N2) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI569369A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI569367A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 1 (PB2)4085.90.000000e+002257/2280 (98%)EPI595063A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI587519A/American wigeon/BC/050-31/2015 (A/H5N8) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI586555A/chicken/BC/FAV25/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI586547A/chicken/BC/FAV24/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI586539A/chicken/BC/FAV23/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI586523A/chicken/BC/FAV21/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI584076A/turkey/BC/FAV14/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI576475A/chicken/BC/FAV9/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI576468A/chicken/BC/FAV8/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI573651A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI573643A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI569379A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 1 (PB2)4080.40.000000e+002256/2280 (98%)EPI542999A/duck/Beijing/FS01/2014 (A/H5N8) segment 1 (PB2)4078.50.000000e+002251/2277 (98%)EPI590738A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI586515A/chicken/BC/FAV20/2014 (A/H5N2) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI585552A/baikal teal/Korea/2402/2014 (A/H5N8) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI573669A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI573661A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI573283A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI573279A/turkey/Washington/61-22/2014 (A/H5N2) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI573274A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 1 (PB2)4074.80.000000e+002255/2280 (98%)EPI586506A/poultry/BC/FAV19/2014 (A/H5N2) segment 1 (PB2)4071.10.000000e+002254/2280 (98%)EPI620455A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI620427A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI620420A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI620413A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI590690A/chicken/Washington/3490-18/2015 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI588949A/goose/Taiwan/a015/2015 (A/H5N8) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI587630A/chicken/Iowa/04-20/2015 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI585089A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI573677A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 1 (PB2)4069.30.000000e+002253/2279 (98%)EPI573269A/chicken/Washington/61-9/2014 (A/H5N2) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI553205A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 1 (PB2)4069.30.000000e+002254/2280 (98%)EPI596293A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 1 (PB2)4065.60.000000e+002216/2224 (99%)EPI595072A/mallard/Korea/N15-99/2015 (A/H5N8) segment 1 (PB2)4065.60.000000e+002253/2280 (98%)EPI552765A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 1 (PB2)4065.60.000000e+002216/2224 (99%)EPI620448A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 1 (PB2)4063.70.000000e+002253/2280 (98%)EPI620441A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 1 (PB2)4063.70.000000e+002253/2280 (98%)EPI620434A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 1 (PB2)4063.70.000000e+002253/2280 (98%)EPI620406A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 1 (PB2)4063.70.000000e+002253/2280 (98%)EPI590724A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 1 (PB2)4063.70.000000e+002253/2280 (98%)EPI590697A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 1 (PB2)4063.70.000000e+002253/2280 (98%)EPI590683A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 1 (PB2)4063.70.000000e+002253/2280 (98%)EPI590731A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 1 (PB2)4058.20.000000e+002252/2280 (98%)EPI590717A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 1 (PB2)4058.20.000000e+002252/2280 (98%)EPI596287A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 1 (PB2)4056.40.000000e+002215/2225 (99%)EPI552757A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 1 (PB2)4056.40.000000e+002215/2225 (99%)EPI590710A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 1 (PB2)4052.70.000000e+002251/2280 (98%)EPI573635A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 1 (PB2)4052.70.000000e+002251/2280 (98%)EPI475576A/wild duck/Shandong/628/2011 (A/H5N1) segment 1 (PB2)3997.30.000000e+002241/2280 (98%)EPI442014A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 1 (PB2)3980.70.000000e+002228/2265 (98%)EPI399957A/duck/Jiangsu/m234/2012 (A/H5N2) segment 1 (PB2)3964.00.000000e+002235/2280 (98%)EPI544889A/duck/Shandong/Q1/2013 (A/H5N8) segment 1 (PB2)3940.00.000000e+002230/2279 (97%)EPI493814A/duck/Guangdong/wy11/2008 (A/H5N5) segment 1 (PB2)3880.90.000000e+002220/2280 (97%)EPI548431A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 1 (PB2)3869.90.000000e+002105/2111 (99%)EPI493822A/duck/Guangdong/wy19/2008 (A/H5N5) segment 1 (PB2)3869.90.000000e+002218/2280 (97%)EPI493830A/duck/Guangdong/wy24/2008 (A/H5N5) segment 1 (PB2)3808.90.000000e+002207/2280 (96%)EPI328897A/duck/Eastern China/909/2009 (A/H5N1) segment 1 (PB2)3742.40.000000e+002195/2280 (96%)EPI328889A/duck/Eastern China/108/2008 (A/H5N1) segment 1 (PB2)3736.90.000000e+002194/2280 (96%)EPI328881A/duck/Eastern China/031/2009 (A/H5N5) segment 1 (PB2)3736.90.000000e+002194/2280 (96%)EPI328873A/duck/Eastern China/008/2008 (A/H5N5) segment 1 (PB2)3736.90.000000e+002194/2280 (96%)EPI441998A/goose/Shandong/k1204/2009 (A/H5N5) segment 1 (PB2)3703.70.000000e+002189/2281 (95%)EPI442006A/goose/Guangdong/k0103/2010 (A/H5N5) segment 1 (PB2)3687.00.000000e+002185/2280 (95%)EPI398954A/goose/Eastern China/1112/2011 (A/H5N2) segment 1 (PB2)3659.30.000000e+002180/2280 (95%)EPI431445A/duck/Hebei/2/2011 (A/H5N2) segment 1 (PB2)3642.70.000000e+002177/2280 (95%)EPI414235A/duck/Jiangsu/1-15/2011 (A/H4N2) segment 1 (PB2)3642.70.000000e+002178/2281 (95%)EPI431453A/duck/Hebei/3/2011 (A/H5N2) segment 1 (PB2)3631.60.000000e+002176/2281 (95%)EPI398953A/duck/Eastern China/1111/2011 (A/H5N2) segment 1 (PB2)3609.50.000000e+002172/2281 (95%)EPI326731A/environment/Korea/CSM3/2002 (A/H3N6) segment 1 (PB2)3587.30.000000e+002164/2275 (95%)EPI387471A/canvasback/Mongolia/2-69/2007 (A/H10) segment 1 (PB2)3572.50.000000e+002165/2280 (94%)EPI387371A/whooper swan/Mongolia/1-14/2007 (A/H3N8) segment 1 (PB2)3572.50.000000e+002165/2280 (94%)EPI387468A/ruddy shelduck/Mongolia/2-29/2007 (A/H3N2) segment 1 (PB2)3567.00.000000e+002164/2280 (94%)EPI387467A/pintail/Mongolia/2-11/2007 (A/H4N2) segment 1 (PB2)3559.60.000000e+002162/2279 (94%)EPI387473A/pintail/Mongolia/2-80/2007 (A/H4N6) segment 1 (PB2)3557.80.000000e+002159/2275 (94%)EPI272278A/duck/Korea/A14/2008 (A/H5N2) segment 1 (PB2)3548.50.000000e+002162/2282 (94%)EPI387375A/whooper swan/Mongolia/1-25/2007 (A/H3N8) segment 1 (PB2)3543.00.000000e+002160/2280 (94%)EPI527592A/ruddy shelduck/Mongolia/961V/2009 (A/H3N8) segment 1 (PB2)3537.50.000000e+002161/2283 (94%)EPI231142A/spot-billed duck/Korea/527/2008 (A/H6N1) segment 1 (PB2)3531.90.000000e+002159/2282 (94%)EPI231150A/spot-billed duck/Korea/528/2008 (A/H6N8) segment 1 (PB2)3528.20.000000e+002155/2277 (94%)EPI508024A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 1 (PB2)3526.40.000000e+002158/2282 (94%)EPI469140A/duck/Guangdong/4323/2007 (A/H11N9) segment 1 (PB2)3526.40.000000e+002159/2283 (94%)EPI401351A/wild duck/Korea/SH5-60/2008 (A/H4N6) segment 1 (PB2)3526.40.000000e+002159/2283 (94%)EPI231182A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 1 (PB2)3522.70.000000e+002150/2271 (94%)EPI387376A/ruddy shelduck/Mongolia/1-26/2007 (A/H3N8) segment 1 (PB2)3519.00.000000e+002136/2251 (94%)EPI231190A/spot-billed duck/Korea/545/2008 (A/H6N1) segment 1 (PB2)3517.10.000000e+002149/2271 (94%)EPI231174A/spot-billed duck/Korea/537/2008 (A/H6N1) segment 1 (PB2)3517.10.000000e+002149/2271 (94%)EPI586240A/muskrat/Russia/63/2014 (A/H2N2) segment 1 (PB2)3515.30.000000e+002154/2279 (94%)EPI527543A/ruddy shelduck/Mongolia/590C2/2009 (A/H11N2) segment 1 (PB2)3515.30.000000e+002156/2282 (94%)EPI503958A/wild duck/SH17-1/2008 (A/H2N3) segment 1 (PB2)3515.30.000000e+002157/2283 (94%)EPI272279A/duck/Korea/A93/2008 (A/H5N2) segment 1 (PB2)3515.30.000000e+002156/2282 (94%)EPI231206A/spot-billed duck/Korea/619/2008 (A/H6N2) segment 1 (PB2)3515.30.000000e+002156/2282 (94%)EPI21386A/duck/Zhejiang/11/2000 (A/H5N1) segment 1 (PB2)3515.30.000000e+002155/2281 (94%)EPI387374A/whooper swan/Mongolia/1-23/2007 (A/H3N8) segment 1 (PB2)3511.60.000000e+002155/2281 (94%)EPI508023A/wild duck/Korea/SH20-27/2008 (A/H7N9) segment 1 (PB2)3509.80.000000e+002156/2283 (94%)EPI269178A/duck/Hunan/491/2005 (A/H6N2) segment 1 (PB2)3509.80.000000e+002156/2283 (94%)EPI469202A/duck/Jiangxi/3286/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469201A/duck/Jiangxi/3230/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469200A/duck/Jiangxi/3214/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469199A/duck/Jiangxi/3190/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469198A/duck/Jiangxi/3169/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469197A/duck/Jiangxi/3141/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469196A/duck/Jiangxi/3096/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469142A/duck/Jiangxi/3257/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469141A/duck/Jiangxi/3152/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI469135A/duck/Jiangxi/3283/2009 (A/H7N9) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI341923A/chicken/Korea/KNUWSJ09/2009 (A/H9N2) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI272276A/chicken/Korea/A170/2009 (A/H9N2) segment 1 (PB2)3504.20.000000e+002154/2282 (94%)EPI527568A/mallard /Mongolia/1551/2010 (A/H3N1) segment 1 (PB2)3498.70.000000e+002153/2282 (94%)EPI527560A/ruddy shelduck/Mongolia/963V/2009 (A/H3N8) segment 1 (PB2)3498.70.000000e+002154/2283 (94%)EPI387907A/wild bird/Korea/A323/2009 (A/H10N1) segment 1 (PB2)3498.70.000000e+002153/2282 (94%)EPI284618A/duck/Hunan/8-19/2009 (A/H4N2) segment 1 (PB2)3498.70.000000e+002153/2282 (94%)EPI231158A/spot-billed duck/Korea/534/2008 (A/H6N1) segment 1 (PB2)3498.70.000000e+002153/2282 (94%)EPI231134A/mallard/Korea/L08-8/2008 (A/H6N1) segment 1 (PB2)3498.70.000000e+002152/2280 (94%)EPI227118A/duck/Beijing/61/05 (A/H3N8) segment 1 (PB2)3498.70.000000e+002153/2282 (94%)EPI222161A/mallard/Altai/1208/2007 (A/H3N6) segment 1 (PB2)3498.70.000000e+002153/2282 (94%)EPI231166A/spot-billed duck/Korea/536/2008 (A/H6N1) segment 1 (PB2)3495.00.000000e+002137/2259 (94%)EPI641767A/duck/Thailand/CU-11655T/2011 (A/H4N6) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI527548A/northern shoveler/ Mongolia/973/2009 (A/H3N8) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432530r8 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432522r78 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432514r7 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432506r68 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432498r678 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432490r67 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432482r6 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432474r58 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432466r578 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432458r57 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432450r568 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432442r5678 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432434r567 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432426r56 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432418r5 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432410r38 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432402r378 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432394r37 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432386r368 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432378r3678 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432370r367 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432362r36 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432354r358 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432346r3578 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432338r357 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432330r3568 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432322r35678 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432314r3567 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432306r356 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432298r35 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432290r3 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432282r28 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432274r278 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432266r27 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432258r268 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432250r2678 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432242r267 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432234r26 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)EPI432226r258 (A/H5N1) segment 1 (PB2)3493.10.000000e+002152/2282 (94%)

  4. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman replied to niman's topic in Dr. Niman's Corner
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI576394A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI576381A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI573164A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI554603A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI552749A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI548627A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI547684A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI586561A/chicken/BC/FAV25/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI586553A/chicken/BC/FAV24/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI586521A/chicken/BC/FAV20/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI586504A/poultry/BC/FAV17/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585651A/baikal teal/Korea/2416/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585650A/baikal teal/Korea/2414/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585649A/baikal teal/Korea/2406/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585647A/baikal teal/Korea/2402/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585646A/baikal teal/Korea/2399/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585645A/baikal teal/Korea/1458/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585644A/baikal teal/Korea/1457/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585643A/baikal teal/Korea/1456/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585642A/baikal teal/Korea/1454/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585641A/baikal teal/Korea/1452/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585639A/baikal teal/Korea/1448/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585638A/baikal teal/Korea/1447/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585637A/baikal teal/Korea/1446/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585635A/baikal teal/Korea/1441/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585634A/baikal teal/Korea/1437/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI585087A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI584082A/turkey/BC/FAV14/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI576480A/chicken/BC/FAV9/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI576473A/chicken/BC/FAV8/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI573301A/turkey/BC/FAV10/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI573190A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI569386A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561700A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561693A/common teal/Korea/H455-30/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561684A/tundra swan/Korea/H411/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561677A/bean goose/Korea/H328/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561670A/mallard/Korea/H297/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561656A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561649A/breeder duck/Korea/H249/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561636A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561629A/mallard/Korea/H207/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561622A/breeder duck/Korea/H200/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561601A/broiler duck/Korea/H133/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561594A/breeder duck/Korea/H128/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561580A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561573A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561566A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561559A/Coot/Korea/H81/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561552A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561532A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561525A/broiler duck/Korea/H65/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561511A/bean goose/Korea/H53/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561351A/broiler duck/Korea/H47/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561344A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561211A/broiler duck/Korea/H31/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561199A/broiler duck/Korea/H29/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI561190A/waterfowl/Korea/S005/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI558012A/duck/England/36038/14 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI558005A/duck/England/36226/14 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI553365A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI553211A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI548496A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI548488A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI547676A/duck/England/36254/14 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI542633A/mallard/Korea/W452/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI517164A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI509756A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI509711A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI555124A/domestic duck/Germany-NI/R3468/2014 (A/H5N8) segment 7 (MP)1796.10.000000e+00976/978 (99%)EPI553181A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 7 (MP)1796.10.000000e+00976/978 (99%)EPI548426A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 7 (MP)1796.10.000000e+00976/978 (99%)EPI620411A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI590743A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI590736A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI590729A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI590722A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI590708A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI590695A/chicken/Washington/3490-18/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI590688A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI587524A/American wigeon/BC/050-31/2015 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586545A/chicken/BC/FAV23/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586537A/chicken/BC/FAV22/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586529A/chicken/BC/FAV21/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586513A/poultry/BC/FAV19/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586496A/poultry/BC/FAV15/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI585652A/baikal teal/Korea/2417/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI585648A/baikal teal/Korea/2403/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI585640A/baikal teal/Korea/1449/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI585636A/baikal teal/Korea/1445/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI585095A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI573289A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI573182A/duck/Netherlands/14015898/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI573174A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI569393A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI568702A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI568701A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI568699A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI568698A/turkey/Washington/61-22/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI568697A/chicken/Washington/61-9/2014 (A/H5N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561708A/bean goose/Korea/H40/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561663A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561615A/breeder duck/Korea/H158/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561608A/broiler duck/Korea/H145/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561545A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561518A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561363A/broiler duck/Korea/H49/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI561356A/broiler duck/Korea/H48/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI553346A/chicken/Miyazaki/7/2014 (A/H5N8) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI588979A/duck/Taiwan/a068/2015 (A/H5N8) segment 7 (MP)1790.50.000000e+00977/981 (99%)EPI588955A/goose/Taiwan/a015/2015 (A/H5N8) segment 7 (MP)1790.50.000000e+00977/981 (99%)EPI620460A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620453A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620446A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620439A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620432A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620425A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620418A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595144A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595136A/greater white-fronted goose/Korea/K14-372-2/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595131A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595122A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595114A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595105A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595097A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595085A/mandarin duck/Korea/K14-363-1/2014 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI595077A/mallard/Korea/N15-99/2015 (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI590715A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI587636A/chicken/Iowa/04-20/2015 (A/H5N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI573641A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI588971A/chicken/Taiwan/a174/2015 (A/H5N3) segment 7 (MP)1785.00.000000e+00976/981 (99%)EPI588963A/duck/Taiwan/a043/2015 (A/H5N2) segment 7 (MP)1785.00.000000e+00976/981 (99%)EPI595069A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI573683A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI573675A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI573667A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI573657A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI573649A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI542997A/duck/Beijing/FS01/2013 (A/H5N8) segment 7 (MP)1781.30.000000e+00974/979 (99%)EPI595061A/common teal/Korea/KU-12/2015 (A/H5N8) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI543005A/duck/Beijing/FS01/2014 (A/H5N8) segment 7 (MP)1775.80.000000e+00973/979 (99%)EPI431451A/duck/Hebei/2/2011 (A/H5N2) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI414241A/duck/Jiangsu/1-15/2011 (A/H4N2) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI398977A/duck/Eastern China/1111/2011 (A/H5N2) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI596292A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 7 (MP)1722.20.000000e+00948/955 (99%)EPI552763A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 7 (MP)1716.70.000000e+00947/955 (99%)EPI475582A/wild duck/Shandong/628/2011 (A/H5N1) segment 7 (MP)1703.70.000000e+00962/982 (97%)EPI590682A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 7 (MP)1698.20.000000e+00929/934 (99%)EPI585114A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 7 (MP)1698.20.000000e+00929/934 (99%)EPI399963A/duck/Jiangsu/m234/2012 (A/H5N2) segment 7 (MP)1698.20.000000e+00961/982 (97%)EPI328891A/duck/Eastern China/909/2009 (A/H5N1) segment 7 (MP)1698.20.000000e+00961/982 (97%)EPI328875A/duck/Eastern China/031/2009 (A/H5N5) segment 7 (MP)1698.20.000000e+00961/982 (97%)EPI328867A/duck/Eastern China/008/2008 (A/H5N5) segment 7 (MP)1698.20.000000e+00961/982 (97%)EPI328883A/duck/Eastern China/108/2008 (A/H5N1) segment 7 (MP)1692.70.000000e+00960/982 (97%)EPI442028A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 7 (MP)1687.10.000000e+00959/982 (97%)EPI398978A/goose/Eastern China/1112/2011 (A/H5N2) segment 7 (MP)1687.10.000000e+00959/982 (97%)EPI596304A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 7 (MP)1677.90.000000e+00912/914 (99%)EPI552779A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 7 (MP)1677.90.000000e+00912/914 (99%)EPI442004A/goose/Shandong/k1204/2009 (A/H5N5) segment 7 (MP)1676.00.000000e+00958/983 (97%)EPI431459A/duck/Hebei/3/2011 (A/H5N2) segment 7 (MP)1670.50.000000e+00956/982 (97%)EPI596298A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 7 (MP)1666.80.000000e+00908/911 (99%)EPI552771A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 7 (MP)1666.80.000000e+00908/911 (99%)EPI442020A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 7 (MP)1665.00.000000e+00955/982 (97%)EPI597680A/duck/Hunan/316/2005 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI493836A/duck/Guangdong/wy24/2008 (A/H5N5) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI493820A/duck/Guangdong/wy11/2008 (A/H5N5) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI442012A/goose/Guangdong/k0103/2010 (A/H5N5) segment 7 (MP)1659.40.000000e+00956/984 (97%)EPI280107A/Shanghai/1/2006 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI280099A/Guangdong/1/2006 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI227312A/Mallard/Huadong/lk/2005 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI164233A/Sichuan/2/2006 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI164225A/Sichuan/1/2006 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI111857A/chicken/Guiyang/3923/2005 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI106032A/China/GD01/2006 (A/H5N1) segment 7 (MP)1659.40.000000e+00954/982 (97%)EPI493828A/duck/Guangdong/wy19/2008 (A/H5N5) segment 7 (MP)1653.90.000000e+00954/983 (97%)EPI399889A/duck/HuBei/03/2010 (A/H5N5) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI276073A/shrike/Tibet/13/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI275985A/duck/Hubei/49/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI275389A/Anhui/2/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI251445A/Anhui/1/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI251423A/Sichuan/3/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI251419A/Zhejiang/1/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI224780A/Shanghai/1/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI167956A/long-tailed shrike/Hong Kong/2762/2007 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI164241A/Anhui/2/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI164217A/Anhui/1/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI127390A/wild duck/Hunan/021/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI111872A/duck/Guiyang/1558/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI111860A/goose/Guiyang/4030/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI111674A/duck/Hunan/5472/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI111656A/goose/Shantou/3265/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI111644A/goose/Guiyang/538/2006 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI111632A/chicken/Guiyang/4059/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00953/982 (97%)EPI111578A/duck/Guangxi/4428/2005 (A/H5N1) segment 7 (MP)1653.90.000000e+00954/983 (97%)EPI506248A/duck/Laos/3295/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00950/979 (97%)EPI337321A/water/Hunan/3/2009 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI337314A/environment/Xinjiang/6/2009 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI280267A/water/Hunan/3/2009 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI280259A/environment/Xinjiang/6/2009 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI275961A/duck/Anhui/1/06 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI275873A/chicken/Sichuan/81/2005 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI275769A/chicken/Hunan/1/2009 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI251431A/Guangdong/1/2008 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI251427A/Anhui/1/2007 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI235901A/duck/Zhejiang/bj/2002 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI222571A/scaly-breasted munia/Hong Kong/2433/2007 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI221720A/chestnut munia/Hong Kong/2442/2007 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI164328A/goose/Yunnan/4985/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI164304A/goose/Yunnan/3798/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI164280A/duck/Yunnan/4873/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI164267A/Jiangxi/1/2005 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI123805A/Chicken/Laos/Xaythiani 32/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI111884A/duck/Hunan/1204/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI111878A/duck/Guiyang/1722/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI111641A/duck/Guiyang/497/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00952/982 (96%)EPI111611A/duck/Guangxi/288/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI111608A/goose/Guangxi/224/2006 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI111587A/chicken/Guangxi/4989/2005 (A/H5N1) segment 7 (MP)1648.30.000000e+00953/983 (96%)EPI135982A/duck/Hunan/533/2004 (A/H5N1) segment 7 (MP)1646.50.000000e+00952/982 (96%)EPI111659A/goose/Shantou/3295/2006 (A/H5N1) segment 7 (MP)1646.50.000000e+00949/978 (97%)EPI111527A/common magpie/Hong Kong/645/2006 (A/H5N1) segment 7 (MP)1646.50.000000e+00949/978 (97%)EPI530991A/duck/Zhejiang/W24/2013 (A/H5N8) segment 7 (MP)1642.80.000000e+00951/982 (96%)EPI408138A/chicken/Hmawbi/517/2007 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI406409A/Muscovy duck/Ca Mau/22/2007 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI406347A/chicken/Hanoi/45/2007 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI406339A/duck/Soc Trang/31/2007 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI361519A/Chicken/Laos/Xaythiani 26/2006 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI350529A/duck/Vietnam/NCVD-013/2008 (A/H5N1) segment 7 (MP)1642.80.000000e+00951/982 (96%)EPI280115A/Hubei/1/2006 (A/H5N1) segment 7 (MP)1642.80.000000e+00950/982 (96%)EPI280091A/Hunan/1/2006 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI276009A/duck/Hunan/69/2004 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI275777A/chicken/Hunan/21/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI275465A/Guangxi/1/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI251424A/Guangdong/2/2006 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI229699A/crested eagle/Belgium/01/2004 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI227011A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI225090A/duck/Nam Dinh/218/2006 (A/H5) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI180954A/duck/Laos/25/2006 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI174623A/duck/Hunan/3315/2006 (A/H5N1) segment 7 (MP)1642.80.000000e+00951/982 (96%)EPI174615A/chicken/Hunan/1793/2007 (A/H5N1) segment 7 (MP)1642.80.000000e+00951/982 (96%)EPI174613A/duck/Henan/1650/2006 (A/H5N1) segment 7 (MP)1642.80.000000e+00951/982 (96%)EPI170659A/chicken/Vietnam/209/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170651A/duck/Vietnam/210/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170644A/Muscovy duck/Vietnam/211/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170637A/chicken/Vietnam/212/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170630A/Muscovy duck/Vietnam/213/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170616A/chicken/Vietnam/216/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170608A/Muscovy duck/Vietnam/217/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170600A/duck/Vietnam/218/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)EPI170592A/duck/Vietnam/219/2005 (A/H5N1) segment 7 (MP)1642.80.000000e+00952/983 (96%)

  5. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman replied to niman's topic in Dr. Niman's Corner
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI576393A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 6 (NA)2597.50.000000e+001406/1406 (100%)EPI576382A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 6 (NA)2597.50.000000e+001406/1406 (100%)EPI552748A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA)2575.30.000000e+001402/1406 (99%)EPI544759A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 6 (NA)2575.30.000000e+001402/1406 (99%)EPI558000A/duck/England/36226/14 (A/H5N8) segment 6 (NA)2569.80.000000e+001401/1406 (99%)EPI585633A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585632A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585630A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585629A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585628A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585626A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585624A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585623A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585620A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585619A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585617A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585616A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI573167A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561676A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561662A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561655A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561648A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561635A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561628A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561621A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561614A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561579A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561510A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561362A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561355A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561350A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561343A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561209A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI561198A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI558007A/duck/England/36038/14 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI553364A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI553350A/wigeon/Sakha/1/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI548495A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI548487A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI547683A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI509714A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI509706A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA)2564.30.000000e+001400/1406 (99%)EPI585627A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI585625A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI585622A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI585618A/baikal teal/Korea/1446/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI573181A/duck/Netherlands/14015898/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI573173A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561707A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561699A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561683A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561669A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561607A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561600A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561593A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561572A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561565A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561558A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561551A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561544A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561531A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561524A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI561517A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI548626A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 6 (NA)2558.70.000000e+001399/1406 (99%)EPI585631A/baikal teal/Korea/2414/2014 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI585621A/baikal teal/Korea/1449/2014 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI585615A/baikal teal/Korea/1437/2014 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI561692A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI561189A/waterfowl/Korea/S005/2014 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI553152A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI547675A/duck/England/36254/14 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI542632A/mallard/Korea/W452/2014 (A/H5N8) segment 6 (NA)2553.20.000000e+001398/1406 (99%)EPI555122A/mallard/Germany-ST/R23/2015 (A/H5N8) segment 6 (NA)2547.70.000000e+001397/1406 (99%)EPI554606A/domestic duck/Germany-NI/R3468/2014 (A/H5N8) segment 6 (NA)2547.70.000000e+001397/1406 (99%)EPI543012A/duck/Beijing/CT01/2014 (A/H5N8) segment 6 (NA)2547.70.000000e+001397/1406 (99%)EPI517163A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 6 (NA)2547.70.000000e+001397/1406 (99%)EPI595068A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 6 (NA)2542.10.000000e+001396/1406 (99%)EPI543004A/duck/Beijing/FS01/2014 (A/H5N8) segment 6 (NA)2542.10.000000e+001396/1406 (99%)EPI553345A/chicken/Miyazaki/7/2014 (A/H5N8) segment 6 (NA)2536.60.000000e+001395/1406 (99%)EPI555068A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 6 (NA)2532.90.000000e+001393/1405 (99%)EPI595143A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI595135A/greater white-fronted goose/Korea/K14-372-2/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI595130A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI595121A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI595113A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI595104A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI595096A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI595084A/mandarin duck/Korea/K14-363-1/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI587523A/American wigeon/BC/050-31/2015 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI573655A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI573648A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI573189A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 6 (NA)2531.00.000000e+001394/1406 (99%)EPI573682A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 6 (NA)2525.50.000000e+001393/1406 (99%)EPI573674A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 6 (NA)2525.50.000000e+001393/1406 (99%)EPI573666A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 6 (NA)2525.50.000000e+001393/1406 (99%)EPI569378A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 6 (NA)2525.50.000000e+001393/1406 (99%)EPI569374A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 6 (NA)2525.50.000000e+001393/1406 (99%)EPI551150A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 6 (NA)2525.50.000000e+001379/1385 (99%)EPI595060A/common teal/Korea/KU-12/2015 (A/H5N8) segment 6 (NA)2520.00.000000e+001392/1406 (99%)EPI596303A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 6 (NA)2518.10.000000e+001375/1381 (99%)EPI552778A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 6 (NA)2518.10.000000e+001375/1381 (99%)EPI596297A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 6 (NA)2516.30.000000e+001374/1380 (99%)EPI552770A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 6 (NA)2516.30.000000e+001374/1380 (99%)EPI595076A/mallard/Korea/N15-99/2015 (A/H5N8) segment 6 (NA)2514.40.000000e+001391/1406 (98%)EPI569392A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 6 (NA)2514.40.000000e+001391/1406 (98%)EPI596291A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 6 (NA)2510.70.000000e+001371/1377 (99%)EPI552762A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 6 (NA)2510.70.000000e+001371/1377 (99%)EPI551144A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 6 (NA)2510.70.000000e+001371/1377 (99%)EPI590681A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 6 (NA)2503.30.000000e+001369/1376 (99%)EPI585113A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 6 (NA)2503.30.000000e+001369/1376 (99%)EPI585086A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 6 (NA)2503.30.000000e+001389/1406 (98%)EPI542627A/duck/Beijing/FS01/2013 (A/H5N8) segment 6 (NA)2471.90.000000e+001368/1385 (98%)EPI588954A/goose/Taiwan/a015/2015 (A/H5N8) segment 6 (NA)2464.60.000000e+001382/1406 (98%)EPI588978A/duck/Taiwan/a068/2015 (A/H5N8) segment 6 (NA)2459.00.000000e+001381/1406 (98%)EPI553210A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 6 (NA)2453.50.000000e+001380/1406 (98%)EPI573640A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 6 (NA)2431.30.000000e+001376/1406 (97%)EPI583873A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA)2425.80.000000e+001375/1406 (97%)EPI530990A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA)2425.80.000000e+001375/1406 (97%)EPI591884A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA)2420.20.000000e+001374/1406 (97%)EPI530989A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA)2420.20.000000e+001374/1406 (97%)EPI561493A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA)2414.70.000000e+001373/1406 (97%)EPI544894A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA)2414.70.000000e+001373/1406 (97%)EPI509700A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA)2414.70.000000e+001373/1406 (97%)EPI507675A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA)2414.70.000000e+001373/1406 (97%)EPI442019A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA)2409.20.000000e+001364/1394 (97%)EPI602039A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA)2390.70.000000e+001350/1378 (97%)EPI485330A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 6 (NA)2143.20.000000e+001326/1408 (94%)EPI132266A/duck/Eastern China/90/2004 (A/H3N8) segment 6 (NA)2132.20.000000e+001324/1408 (94%)EPI132262A/duck/Eastern China/19/2004 (A/H3N8) segment 6 (NA)2121.10.000000e+001322/1408 (93%)EPI326921A/environment/Korea/SH12-6/2008 (A/H3N8) segment 6 (NA)2110.00.000000e+001319/1407 (93%)EPI416940A/duck/Vietnam/OIE-2577/2011 (A/H3N8) segment 6 (NA)2076.80.000000e+001314/1408 (93%)EPI438257A/duck/Vietnam/G18-1/2011 (A/H3N8) segment 6 (NA)2060.10.000000e+001311/1408 (93%)EPI387415A/ruddy shelduck/Mongolia/1-26/2007 (A/H3N8) segment 6 (NA)2060.10.000000e+001284/1367 (93%)EPI387510A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 6 (NA)2038.00.000000e+001280/1367 (93%)EPI387494A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 6 (NA)2032.40.000000e+001279/1367 (93%)EPI326920A/environment/Korea/SH12-8/2008 (A/H3N8) segment 6 (NA)2030.60.000000e+001276/1364 (93%)EPI363489A/duck/Guangxi/2736/2006 (A/H6N8) segment 6 (NA)2026.90.000000e+001305/1408 (92%)EPI485320A/ruddy shelduck/Mongolia/1787/2011 (A/H3N8) segment 6 (NA)1969.60.000000e+001285/1391 (92%)EPI485328A/common shelduck/Mongolia/2076/2011 (A/H3N8) segment 6 (NA)1849.60.000000e+001255/1379 (91%)EPI128912A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA)1733.30.000000e+001258/1414 (88%)EPI618125A/mallard/Sweden/2823/2003 (A/H10N8) segment 6 (NA)1727.70.000000e+001255/1412 (88%)EPI407886A/duck/Ukraine/1963 (A/H3N8) segment 6 (NA)1727.70.000000e+001258/1415 (88%)EPI42182A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA)1727.70.000000e+001258/1415 (88%)EPI3107A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA)1722.20.000000e+001257/1415 (88%)EPI132460A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA)1716.70.000000e+001256/1415 (88%)EPI251642A/mallard/Netherlands/10/1999 (A/H1N8) segment 6 (NA)1707.40.000000e+001212/1353 (89%)EPI618048A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 6 (NA)1666.80.000000e+001246/1414 (88%)EPI128904A/duck/Burjatia/652/1988 (A/H3N8) segment 6 (NA)1650.20.000000e+001246/1417 (87%)EPI2999A/duck/Hong Kong/438/1977 (A/H4N8) segment 6 (NA)1650.20.000000e+001244/1415 (87%)EPI182043A/common eider/Netherlands/1/2006 (A/H3N8) segment 6 (NA)1644.60.000000e+001242/1414 (87%)EPI336006A/teal/Chany/444/2009 (A/H8N8) segment 6 (NA)1639.10.000000e+001242/1415 (87%)EPI316502A/duck/Hubei/126/1985 (A/H7N8) segment 6 (NA)1639.10.000000e+001244/1417 (87%)EPI314410A/mallard/Czech Republic/14516/2007 (A/H3N8) segment 6 (NA)1639.10.000000e+001238/1411 (87%)EPI251715A/mallard/Sweden/45/2002 (A/H11N8) segment 6 (NA)1639.10.000000e+001240/1413 (87%)EPI398948A/mallard/Norway/10_779/2009 (A/H3N8) segment 6 (NA)1633.60.000000e+001240/1414 (87%)EPI372503A/mallard/Ukraine/05842-NAMRU3/2006 (A/H3N8) segment 6 (NA)1633.60.000000e+001238/1412 (87%)EPI339175A/mallard/Germany-BY/R1353/2010 (A/H6N8) segment 6 (NA)1633.60.000000e+001238/1412 (87%)EPI339174A/goose/Germany/R1767/2007 (A/H6N8) segment 6 (NA)1633.60.000000e+001238/1412 (87%)EPI316762A/mallard/Czech Republic/13577-24K/2010 (A/H3N8) segment 6 (NA)1633.60.000000e+001238/1412 (87%)EPI268303A/duck/Hunan/3748/2004 (A/H6N8) segment 6 (NA)1633.60.000000e+001238/1412 (87%)EPI617140A/mallard/Sweden/1636/2002 (A/H3N8) segment 6 (NA)1628.00.000000e+001239/1414 (87%)EPI397605A/duck/Germany-NW/R2185/2006 (A/H6N8) segment 6 (NA)1628.00.000000e+001241/1416 (87%)EPI310343A/duck/Zambia/04/2008 (A/H3N8) segment 6 (NA)1628.00.000000e+001238/1413 (87%)EPI235185A/Mallard/65112/03 (A/H3N8) segment 6 (NA)1628.00.000000e+001238/1413 (87%)EPI182115A/mallard/Netherlands/33/2006 (A/H7N8) segment 6 (NA)1628.00.000000e+001239/1414 (87%)EPI182051A/turnstone/Netherlands/1/2007 (A/H3N8) segment 6 (NA)1628.00.000000e+001239/1414 (87%)EPI268302A/mallard/Jiangxi/6285/2004 (A/H6N8) segment 6 (NA)1624.30.000000e+001236/1411 (87%)EPI268301A/mallard/Jiangxi/4408/2005 (A/H6N8) segment 6 (NA)1624.30.000000e+001236/1411 (87%)EPI574227A/mule duck/Bulgaria/365/2010 (A/H6N8) segment 6 (NA)1622.50.000000e+001237/1413 (87%)EPI339172A/mallard/Germany-BE/R663/08 (A/H3N8) segment 6 (NA)1622.50.000000e+001237/1413 (87%)EPI296538A/mallard/Netherlands/20/2005 (A/H12N8) segment 6 (NA)1622.50.000000e+001237/1413 (87%)EPI296491A/common eider/Netherlands2/2006 (A/H4N8) segment 6 (NA)1622.50.000000e+001237/1413 (87%)EPI182083A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 6 (NA)1622.50.000000e+001237/1413 (87%)EPI182075A/common teal/Netherlands/2/2005 (A/H6N8) segment 6 (NA)1622.50.000000e+001237/1413 (87%)EPI14499A/duck/Spain/543/2006 (A/H6N8) segment 6 (NA)1622.50.000000e+001237/1413 (87%)EPI398924A/common gull/Norway/10_1602/2009 (A/H6N8) segment 6 (NA)1616.90.000000e+001236/1413 (87%)EPI367575A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 6 (NA)1616.90.000000e+001238/1415 (87%)EPI234646A/duck/Beijing/40/04 (A/H3N8) segment 6 (NA)1616.90.000000e+001236/1413 (87%)EPI169324A/Anas platyrhynchos/Belgium/12827/2007 (A/H3N8) segment 6 (NA)1616.90.000000e+001236/1413 (87%)EPI408014A/duck/Chabarovsk/1610/1972 (A/H3N8) segment 6 (NA)1611.40.000000e+001235/1413 (87%)EPI251795A/mallard/Sweden/7/2003 (A/H10N8) segment 6 (NA)1611.40.000000e+001166/1311 (88%)EPI222081A/gadwall/Altai/1328/2007 (A/H3N8) segment 6 (NA)1611.40.000000e+001234/1412 (87%)EPI222073A/gadwall/Altai/1326/2007 (A/H3N8) segment 6 (NA)1611.40.000000e+001234/1412 (87%)EPI222065A/gadwall/Altai/1325/2007 (A/H3N8) segment 6 (NA)1611.40.000000e+001234/1412 (87%)EPI221959A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 6 (NA)1611.40.000000e+001236/1414 (87%)EPI42316A/duck/Chabarovsk/1610/1972 (A/H3N8) segment 6 (NA)1611.40.000000e+001235/1413 (87%)EPI13715A/duck/Norway/1/03 (A/H3N8) segment 6 (NA)1609.60.000000e+001233/1412 (87%)EPI618086A/mallard/Sweden/233/2002 (A/H10N8) segment 6 (NA)1605.90.000000e+001241/1420 (87%)EPI600840A/duck/Jiangxi/2039/2005 (A/H10N8) segment 6 (NA)1605.90.000000e+001236/1415 (87%)EPI356301A/Greater white-fronted goose/Germany-NW/R02/2009 (A/H6N8) segment 6 (NA)1605.90.000000e+001234/1413 (87%)EPI302179A/Greater White-Fronted Goose/Germany-NW/R02/2009 (A/H6N8) segment 6 (NA)1605.90.000000e+001234/1413 (87%)EPI232400A/duck/Beijing/61/05 (A/H3N8) segment 6 (NA)1605.90.000000e+001234/1413 (87%)EPI222057A/gadwall/Altai/1324/2007 (A/H3N8) segment 6 (NA)1605.90.000000e+001234/1413 (87%)EPI184026A/mallard/Hungary/19616/2007 (A/H3N8) segment 6 (NA)1605.90.000000e+001235/1414 (87%)EPI14495A/duck/Spain/539/2006 (A/H6N8) segment 6 (NA)1605.90.000000e+001234/1413 (87%)EPI2443A/duck/Hokkaido/10/1985 (A/H3N8) segment 6 (NA)1605.90.000000e+001235/1414 (87%)EPI2277A/Duck/Hokkaido/8/80 (A/H3N8) segment 6 (NA)1605.90.000000e+001235/1414 (87%)EPI600847A/migratory duck/Jiangxi/593/2005 (A/H10N8) segment 6 (NA)1600.30.000000e+001235/1415 (87%)EPI574271A/mule duck/Bulgaria/328/2011 (A/H5N8) segment 6 (NA)1600.30.000000e+001231/1411 (87%)EPI251736A/mallard/Sweden/50/2002 (A/H3N8) segment 6 (NA)1600.30.000000e+001211/1380 (87%)EPI221967A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 6 (NA)1600.30.000000e+001234/1414 (87%)EPI221951A/water/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 6 (NA)1600.30.000000e+001234/1414 (87%)EPI190374A/mallard/Netherlands/17/2007 (A/H11N8) segment 6 (NA)1600.30.000000e+001233/1413 (87%)EPI181955A/mallard/Netherlands/3/2005 (A/H3N8) segment 6 (NA)1600.30.000000e+001232/1412 (87%)EPI174847A/duck/Denmark/75-65472-P34/2003 (A/H3N8) segment 6 (NA)1600.30.000000e+001233/1413 (87%)EPI128908A/Duck/Hokkaido/8/80 (A/H3N8) segment 6 (NA)1600.30.000000e+001235/1415 (87%)EPI105959A/Bewick's swan/Netherlands/2/2005 (A/H6N8) segment 6 (NA)1600.30.000000e+001234/1414 (87%)EPI345774A/duck/Eastern China/50/2002 (A/H6N8) segment 6 (NA)1594.80.000000e+001233/1414 (87%)EPI132438A/duck/Eastern China/163/2002 (A/H6N8) segment 6 (NA)1594.80.000000e+001232/1413 (87%)EPI617981A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 6 (NA)1589.20.000000e+001233/1415 (87%)EPI439277A/common teal/Georgia/1/2011 (A/H3N8) segment 6 (NA)1589.20.000000e+001202/1369 (87%)EPI272796A/mallard/PT/29497-11/2006 (A/H3N8) segment 6 (NA)1589.20.000000e+001231/1413 (87%)EPI221975A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 6 (NA)1589.20.000000e+001232/1414 (87%)EPI128906A/duck/Chabarovsk/1610/1972 (A/H3N8) segment 6 (NA)1589.20.000000e+001231/1413 (87%)EPI106660A/wild bird feces/Korea/ES1-9/03 (A/H10N8) segment 6 (NA)1589.20.000000e+001223/1400 (87%)EPI106656A/wild bird feces/Korea/ES1-17/03 (A/H10N8) segment 6 (NA)1589.20.000000e+001223/1400 (87%)EPI515116A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 6 (NA)1583.70.000000e+001235/1418 (87%)EPI470301A/wild duck/Jiangxi/9157/2005 (A/H7N8) segment 6 (NA)1583.70.000000e+001232/1415 (87%)EPI236671A/duck/Siberia/100/2001 (A/H3N8) segment 6 (NA)1583.70.000000e+001231/1414 (87%)EPI190185A/mallard/Switzerland/WV4060057/2006 (A/H2N8) segment 6 (NA)1583.70.000000e+001231/1414 (87%)EPI234639A/duck/Beijing/33/04 (A/H3N8) segment 6 (NA)1581.90.000000e+001217/1394 (87%)EPI185345A/mute swan/Germany/R2927/2007 (A/H6N8) segment 6 (NA)1581.90.000000e+001211/1385 (87%)EPI185337A/mallard/Germany/R529/2008 (A/H3N8) segment 6 (NA)1581.90.000000e+001212/1386 (87%)EPI224540A/Anas plathyrhynchos/Spain/0454/2006 (A/H3N8) segment 6 (NA)1578.20.000000e+001230/1414 (86%)EPI254539A/Teal/Norway/10_1575/2007 (A/H3N8) segment 6 (NA)1574.50.000000e+001213/1390 (87%)EPI232414A/duck/Beijing/59/05 (A/H3N8) segment 6 (NA)1574.50.000000e+001215/1393 (87%)EPI601008A/duck/Jiangxi/3008/2009 (A/H0) segment 6 (NA)1572.60.000000e+001230/1415 (86%)EPI600869A/migratory duck/Jiangxi/21248/2009 (A/H10N8) segment 6 (NA)1572.60.000000e+001230/1415 (86%)EPI574270A/mule duck/Bulgaria/181/2010 (A/H0) segment 6 (NA)1572.60.000000e+001226/1411 (86%)EPI503993A/wild duck/SH38-26/2010 (A/H2N8) segment 6 (NA)1572.60.000000e+001227/1412 (86%)EPI485337A/ruddy shelduck/Mongolia/881V/2009 (A/H3N8) segment 6 (NA)1572.60.000000e+001230/1415 (86%)EPI476105A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 6 (NA)1572.60.000000e+001229/1414 (86%)EPI476068A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 6 (NA)1572.60.000000e+001228/1413 (86%)EPI476052A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 6 (NA)1572.60.000000e+001228/1413 (86%)EPI470299A/wild duck/Jiangxi/19615/2009 (A/H7N8) segment 6 (NA)1572.60.000000e+001229/1414 (86%)EPI234653A/duck/Beijing/44/04 (A/H3N8) segment 6 (NA)1568.90.000000e+001214/1393 (87%)EPI600862A/duck/Jiangxi/4759/2009 (A/H10N8) segment 6 (NA)1567.10.000000e+001230/1416 (86%)EPI504031A/wild duck/SH38-64/2010 (A/H2N8) segment 6 (NA)1567.10.000000e+001226/1412 (86%)EPI504027A/wild duck/SH38-28/2010 (A/H2N8) segment 6 (NA)1567.10.000000e+001226/1412 (86%)EPI476118A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 6 (NA)1567.10.000000e+001228/1414 (86%)EPI476098A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 6 (NA)1567.10.000000e+001228/1414 (86%)EPI476045A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 6 (NA)1567.10.000000e+001228/1414 (86%)EPI476038A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 6 (NA)1567.10.000000e+001228/1414 (86%)EPI461631A/duck/Hunan/S1256/2012 (A/H3N8) segment 6 (NA)1567.10.000000e+001227/1413 (86%)EPI167464A/red-necked stint/Western Australia/4094/1984 (A/H4N8) segment 6 (NA)1567.10.000000e+001230/1416 (86%)EPI132442A/duck/Eastern China/119/2005 (A/H3N8) segment 6 (NA)1567.10.000000e+001230/1416 (86%)EPI43243A/turkey/Ireland/1378/1983 (A/H5N8) segment 6 (NA)1567.10.000000e+001232/1418 (86%)EPI42145A/red-necked stint/Australia/4189/1980 (A/H4N8) segment 6 (NA)1567.10.000000e+001230/1416 (86%)EPI339173A/mallard/Germany-RP/R2322/2007 (A/H3N8) segment 6 (NA)1565.20.000000e+001207/1384 (87%)EPI600853A/duck/Jiangxi/22960/2008 (A/H10N8) segment 6 (NA)1561.50.000000e+001227/1414 (86%)

  6. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman replied to niman's topic in Dr. Niman's Corner
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI576391A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI576384A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 4 (HA)3138.60.000000e+001702/1704 (99%)EPI550849A/duck/England/36226/14 (A/H5N8) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI550848A/duck/England/36038/14 (A/H5N8) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI573239A/mallard/Korea/H1924-6/2014 (A/H5N8) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI553349A/wigeon/Sakha/1/2014 (A/H5N8) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI548493A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI548485A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI547673A/duck/England/36254/14 (A/H5N8) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI573179A/duck/Netherlands/14015898/2014 (A/H5N8) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI553362A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI552746A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI547678A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI573187A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI573171A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI573163A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI548623A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI573196A/broiler duck/Korea/H651/2014 (A/H5N8) segment 4 (HA)3098.00.000000e+001695/1704 (99%)EPI573194A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)3098.00.000000e+001695/1704 (99%)EPI585584A/baikal teal/Korea/1452/2014 (A/H5N8) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI585583A/baikal teal/Korea/1449/2014 (A/H5N8) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI509704A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI585580A/baikal teal/Korea/1446/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI573200A/Korean native chicken/Korea/H1139/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561697A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561681A/tundra swan/Korea/H411/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561660A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561598A/broiler duck/Korea/H133/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561348A/broiler duck/Korea/H47/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561204A/broiler duck/Korea/H31/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561196A/broiler duck/Korea/H29/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI561187A/waterfowl/Korea/S005/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI544756A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 4 (HA)3086.90.000000e+001685/1692 (99%)EPI585595A/baikal teal/Korea/2417/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI585589A/baikal teal/Korea/2399/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI585588A/baikal teal/Korea/1458/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI585586A/baikal teal/Korea/1456/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI585585A/baikal teal/Korea/1454/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI573242A/Common Teal/Korea/H844/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI573192A/breeder chicken/Korea/H503/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561690A/common teal/Korea/H455-30/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561646A/breeder duck/Korea/H249/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561633A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561626A/mallard/Korea/H207/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561605A/broiler duck/Korea/H145/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561591A/breeder duck/Korea/H128/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561556A/Coot/Korea/H81/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561549A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561529A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561515A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561508A/bean goose/Korea/H53/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI561341A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI509709A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI585594A/baikal teal/Korea/2416/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585592A/baikal teal/Korea/2406/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585591A/baikal teal/Korea/2403/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585590A/baikal teal/Korea/2402/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585582A/baikal teal/Korea/1448/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585581A/baikal teal/Korea/1447/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585579A/baikal teal/Korea/1445/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585578A/baikal teal/Korea/1441/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585577A/baikal teal/Korea/1437/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573240A/breeder duck/Korea/H345/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573203A/chicken/Korea/H1292/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573199A/breeder chicken/Korea/H1068/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573197A/chicken/Korea/H881/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573195A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI561674A/bean goose/Korea/H328/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI561612A/breeder duck/Korea/H158/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI561577A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI561570A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI561563A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI561542A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI561522A/broiler duck/Korea/H65/2014 (A/H5N8) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI585593A/baikal teal/Korea/2414/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI585587A/baikal teal/Korea/1457/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI573207A/chicken/Korea/H1350/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI573201A/chicken/Korea/H1236/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI561705A/bean goose/Korea/H40/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI561667A/mallard/Korea/H297/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI561653A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI561619A/breeder duck/Korea/H200/2014 (A/H5N8) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI590679A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 4 (HA)3064.70.000000e+001681/1692 (99%)EPI585111A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 4 (HA)3064.70.000000e+001681/1692 (99%)EPI573241A/breeder duck/Korea/H566/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573208A/gadwall/Korea/H1351/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573204A/goose/Korea/H1296/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573202A/chicken/Korea/H1268/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI561360A/broiler duck/Korea/H49/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI561336A/broiler duck/Korea/H48/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI542628A/mallard/Korea/W452/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI517161A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI596301A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 4 (HA)3062.90.000000e+001674/1682 (99%)EPI596295A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 4 (HA)3062.90.000000e+001681/1692 (99%)EPI552776A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 4 (HA)3062.90.000000e+001674/1682 (99%)EPI552768A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA)3062.90.000000e+001681/1692 (99%)EPI573212A/Korean native chicken/Korea/H1554/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI573211A/goose/Korea/H1545/2014 (A/H5N8) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI573205A/Korean native chicken/Korea/H1299/2014 (A/H5N8) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI573198A/broiler duck/Korea/H959/2014 (A/H5N8) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI573209A/broiler duck/Korea/H1413/2014 (A/H5N8) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI573213A/broiler duck/Korea/H1556/2014 (A/H5N8) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI596289A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 4 (HA)3020.40.000000e+001645/1650 (99%)EPI573218A/Korean native chicken/Korea/H1687/2014 (A/H5N8) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573217A/broiler duck/Korea/H1685/2014 (A/H5N8) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573216A/broiler duck/Korea/H1683/2014 (A/H5N8) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573210A/broiler duck/Korea/H1414/2014 (A/H5N8) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573206A/breeder duck/Korea/H1343/2014 (A/H5N8) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI552760A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 4 (HA)3020.40.000000e+001645/1650 (99%)EPI551149A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA)3016.70.000000e+001656/1667 (99%)EPI588968A/chicken/Taiwan/a174/2015 (A/H5N3) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI573638A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI573219A/goose/Korea/H1689/2014 (A/H5N8) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI573228A/broiler duck/Korea/H1755/2014 (A/H5N8) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI573227A/breeder duck/Korea/H1752/2014 (A/H5N8) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI573222A/broiler duck/Korea/H1733/2014 (A/H5N8) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI573220A/goose/Korea/H1698/2014 (A/H5N8) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI573215A/breeder duck/Korea/H1596/2014 (A/H5N8) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI573214A/broiler duck/Korea/H1582/2014 (A/H5N8) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI586534A/chicken/BC/FAV22/2014 (A/H5N2) segment 4 (HA)3005.60.000000e+001679/1705 (98%)EPI595055A/common teal/Korea/KU-12/2015 (A/H5N8) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI590712A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI586550A/chicken/BC/FAV24/2014 (A/H5N2) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI586518A/chicken/BC/FAV20/2014 (A/H5N2) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI586509A/poultry/BC/FAV19/2014 (A/H5N2) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI584079A/turkey/BC/FAV14/2014 (A/H5N2) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI573298A/turkey/BC/FAV10/2014 (A/H5N2) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI573229A/broiler duck/Korea/H1763/2014 (A/H5N8) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI573224A/broiler duck/Korea/H1739/2014 (A/H5N8) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI569383A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI590740A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI590733A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI590719A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI588976A/duck/Taiwan/a068/2015 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI588960A/duck/Taiwan/a043/2015 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI586542A/chicken/BC/FAV23/2014 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI586526A/chicken/BC/FAV21/2014 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI586493A/poultry/BC/FAV15/2014 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI585092A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI576470A/chicken/BC/FAV8/2014 (A/H5N2) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI573235A/Korean native chicken/Korea/H1903/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI573233A/Korean native chicken/Korea/H1847/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI573231A/broiler duck/Korea/H1839/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI573225A/broiler duck/Korea/H1745/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI573223A/broiler duck/Korea/H1734/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI573221A/broiler duck/Korea/H1731/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI569390A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI569376A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI569372A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI553343A/chicken/Miyazaki/7/2014 (A/H5N8) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI620408A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI590726A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI590699A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI590692A/chicken/Washington/3490-18/2015 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI587633A/chicken/Iowa/04-20/2015 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI587521A/American wigeon/BC/050-31/2015 (A/H5N8) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI586501A/poultry/BC/FAV17/2014 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI585084A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI576477A/chicken/BC/FAV9/2014 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI573680A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI573654A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI573646A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI573281A/turkey/Washington/61-22/2014 (A/H5N2) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI573238A/mallard/Korea/H2003/2014 (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI573237A/mallard/Korea/H1991/2014 (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI573236A/spot-billed duck/Korea/H1981/2014 (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI573230A/broiler duck/Korea/H1803/2014 (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI573226A/Korean native chicken/Korea/H1747/2014 (A/H5N8) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI553208A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 4 (HA)2989.00.000000e+001674/1702 (98%)EPI595079A/mallard/Korea/N15-99/2015 (A/H5N8) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI595066A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI590685A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI586558A/chicken/BC/FAV25/2014 (A/H5N2) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI573664A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI573271A/chicken/Washington/61-9/2014 (A/H5N2) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI573234A/broiler duck/Korea/H1864/2014 (A/H5N8) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI573232A/broiler duck/Korea/H1840/2014 (A/H5N8) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI620422A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 4 (HA)2981.60.000000e+001676/1706 (98%)EPI595138A/greater white-fronted goose/Korea/K14-372-2/2014 (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI595133A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI595124A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI595116A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI595107A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI595094A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI588952A/goose/Taiwan/a015/2015 (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI573672A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI573276A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI595146A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 4 (HA)2977.90.000000e+001673/1704 (98%)EPI595082A/mandarin duck/Korea/K14-363-1/2014 (A/H5N8) segment 4 (HA)2977.90.000000e+001673/1704 (98%)EPI620436A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 4 (HA)2976.10.000000e+001675/1706 (98%)EPI573286A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI620457A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 4 (HA)2970.50.000000e+001674/1706 (98%)EPI620450A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 4 (HA)2970.50.000000e+001674/1706 (98%)EPI620443A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 4 (HA)2970.50.000000e+001674/1706 (98%)EPI620415A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 4 (HA)2970.50.000000e+001674/1706 (98%)EPI620429A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 4 (HA)2965.00.000000e+001673/1706 (98%)EPI568474A/green-winged teal/Korea/KU-12/2015 (A/H5) segment 4 (HA)2965.00.000000e+001662/1690 (98%)EPI551143A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 4 (HA)2948.40.000000e+001606/1611 (99%)EPI543010A/duck/Beijing/CT01/2014 (A/H5N8) segment 4 (HA)2859.70.000000e+001588/1608 (98%)EPI542617A/duck/Beijing/FS01/2013 (A/H5N8) segment 4 (HA)2843.10.000000e+001584/1608 (98%)EPI593747A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA)2837.60.000000e+001650/1706 (96%)EPI543002A/duck/Beijing/FS01/2014 (A/H5N8) segment 4 (HA)2837.60.000000e+001585/1609 (98%)EPI475579A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA)2837.60.000000e+001650/1706 (96%)EPI442017A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA)2837.60.000000e+001650/1706 (96%)EPI553144A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 4 (HA)2817.30.000000e+001538/1545 (99%)EPI399960A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA)2809.90.000000e+001646/1707 (96%)EPI398966A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA)2809.90.000000e+001645/1706 (96%)EPI431456A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA)2793.30.000000e+001642/1706 (96%)EPI398965A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA)2787.70.000000e+001641/1706 (96%)EPI602419A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA)2771.10.000000e+001638/1706 (96%)EPI602412A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA)2771.10.000000e+001638/1706 (96%)EPI602045A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA)2771.10.000000e+001638/1706 (96%)EPI509698A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA)2771.10.000000e+001638/1706 (96%)EPI602028A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA)2767.40.000000e+001637/1706 (95%)EPI599662A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA)2765.60.000000e+001638/1707 (95%)EPI599655A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA)2765.60.000000e+001638/1707 (95%)EPI599648A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA)2765.60.000000e+001638/1707 (95%)EPI599346A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA)2765.60.000000e+001637/1706 (95%)EPI599339A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA)2765.60.000000e+001637/1706 (95%)EPI599299A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA)2765.60.000000e+001637/1706 (95%)EPI591879A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA)2765.60.000000e+001637/1706 (95%)EPI530054A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA)2765.60.000000e+001637/1706 (95%)EPI602484A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA)2760.00.000000e+001637/1707 (95%)EPI599333A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI599327A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI599292A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI561495A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI544892A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA)2760.00.000000e+001637/1707 (95%)EPI531456A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA)2760.00.000000e+001636/1706 (95%)EPI602477A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI599320A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI599313A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI599285A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA)2754.50.000000e+001635/1706 (95%)EPI645049A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA)2752.60.000000e+001632/1702 (95%)EPI602491A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI602103A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI602037A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA)2748.90.000000e+001634/1706 (95%)EPI601941A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA)2748.90.000000e+001635/1707 (95%)EPI583870A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA)2748.90.000000e+001635/1707 (95%)EPI645042A/swine/Guangdong/2/2014 (A/H5N6) segment 4 (HA)2747.10.000000e+001631/1702 (95%)EPI530986A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI507673A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA)2743.40.000000e+001633/1706 (95%)EPI593889A/Guangzhou/39715/2014 (A/H5N6) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI590813A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI530985A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI530063A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA)2737.90.000000e+001632/1706 (95%)EPI493825A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA)2737.90.000000e+001633/1707 (95%)EPI593896A/duck/Guangzhou/41227/2014 (A/H5N6) segment 4 (HA)2732.30.000000e+001631/1706 (95%)EPI590806A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 4 (HA)2732.30.000000e+001631/1706 (95%)EPI550768A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA)2726.80.000000e+001631/1707 (95%)

  7. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman replied to niman's topic in Dr. Niman's Corner
    Isolate detailIsolate name: A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 Isolate ID: EPI_ISL_175535 Passage details/history: Clinical sample Type: A / H5N8 Lineage: Sample information Collection date: 2015-02-18 Host Cygnus olor Additional host information: Young female (still had some gray feathers). Domestic status: Wild Is vaccinated: Location: Sweden / Stockholms Lan / Stockholms Kommun Additional location information: Ladugårdslandsviken, Stockholm Health status: Dead Specimen source: Tracheal swab Strain or commercial product name used for vaccination: Institute information Originating lab: National Veterinary Institute Sample ID given by the sample provider: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Submitting lab: National Veterinary Institute Sample ID given by the submitting laboratory: Authors: 'Zohari,Siamak'; 'Karin,Ullman'; Olofsson,Ann-Sophie* Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden PublicationPublication In vivo antiviral resistance PhenotypeGenotypeUnspecifiedAntiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional informationAntigenic characterization: Note: Sequence segmentidentifierlengthaccession #INSDCSequence PB2 A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 2308 EPI576396 PB1 A/MuteSwan/Sweden/SVA-1503130141-SZ543/015 2309 EPI576389 PA A/MuteSwan/Sweden/SVA-1503130141-SZ543/015 2200 EPI576390 HA A/MuteSwan/Sweden/SVA-1503130141-SZ543/015 1748 EPI576391 NP A/MuteSwan/Sweden/SVA-1503130141-SZ543/015 1529 EPI576392 NA A/MuteSwan/Sweden/SVA-1503130141-SZ543/015 1425 EPI576393 MP A/MuteSwan/Sweden/SVA-1503130141-SZ543/015 992 EPI576394 NS A/MuteSwan/Sweden/SVA-1503130141-SZ543/015 855 EPI576395 Submitter information Submitter: Zohari, Siamak Submission Date: 2015-03-28 Last modifier: Zohari, Siamak Last modified: 2015-05-26 Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden

  8. 2015 Clade 2.3.4.4 H5N8 Sequences From Dead Mute Swans In Stockholm Sweden

    niman posted a topic in Dr. Niman's Corner
    Full H5N8 sequences from dead mute swans in Stockholm Sweden in 2015 have been released at GISAID.

  9. 16 Fujian H5 Positives Reported by APHIS

    niman replied to niman's topic in Avian Flu
    H5N2 map update https://www.google.com/maps/d/edit?mid=zv94AJqgUct4.kB0Jt6F7NlIM&hl=en

  10. 16 Fujian H5 Positives Reported by APHIS

    niman replied to niman's topic in Avian Flu
    H5N8 map update https://www.google.com/maps/d/edit?authuser=0&authuser=0&hl=en&hl=en&mid=zv94AJqgUct4.ktIjI0Pz2tn8

  11. Over 10,000 Wild Birds Sampled In US States In Summer of 2015

    niman posted a topic in Avian Flu
    APHIS has updated wild birds tables to include number of birds sampled. Collections from December 2014 through June 2015 were placed in 1 table with 99 positives. A new table with samples collected beginning in July 2015 were in a second table. Although over 10,000 birds were sampled, only one H5 sample (a mallard in Davis County, Utah) was reported. https://www.aphis.usda.gov/wildlife_damage/downloads/JULY 2015 - JUNE 2016 WILD BIRD POSITIVE HIGHLY PATHOGENIC AVIAN INFLUENZA CASES IN THE UNITED STATES.pdf

  12. 16 Fujian H5 Positives Reported by APHIS

    niman posted a topic in Avian Flu
    APHIS has updated wild bird tables with 16 new positives. Although full serotypes were not generated, 15 were from January collections in Northern California (Colusa and Sutter Counties) where only H5N8 was found in positives when full serotypes were obtained. The 16th positive was a May collection in Sioux County, Iowa and was likely H5N2. https://www.aphis.usda.gov/wildlife_damage/downloads/DEC 2014 - JUNE 2015 WILD BIRD POSITIVE HIGHLY PATHOGENIC AVIAN INFLUENZA CASES IN THE UNITED STATES.pdf

  13. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI645039A/swine/Guangdong/1/2014 (A/H5N6) segment 8 (NS)1520.90.000000e+00823/823 (100%)EPI645046A/swine/Guangdong/2/2014 (A/H5N6) segment 8 (NS)1509.80.000000e+00821/823 (99%)EPI602488A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 8 (NS)1498.80.000000e+00819/823 (99%)EPI599366A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 8 (NS)1493.20.000000e+00818/823 (99%)EPI590817A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 8 (NS)1493.20.000000e+00818/823 (99%)EPI590810A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 8 (NS)1493.20.000000e+00818/823 (99%)EPI530067A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 8 (NS)1493.20.000000e+00818/823 (99%)EPI530058A/duck/Jiangxi/95/2014 (A/H5N6) segment 8 (NS)1493.20.000000e+00818/823 (99%)EPI602481A/chicken/Shenzhen/715/2013 (A/H5N6) segment 8 (NS)1487.70.000000e+00817/823 (99%)EPI602423A/chicken/Dongguan/3363/2013 (A/H5N6) segment 8 (NS)1487.70.000000e+00817/823 (99%)EPI602416A/chicken/Dongguan/2690/2013 (A/H5N6) segment 8 (NS)1487.70.000000e+00817/823 (99%)EPI550767A/duck/Laos/XBY004/2014 (A/H5N6) segment 8 (NS)1487.70.000000e+00817/823 (99%)EPI531496A/duck/Guangdong/GD01/2014 (A/H5N6) segment 8 (NS)1487.70.000000e+00817/823 (99%)EPI602495A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596542A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596538A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596534A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596530A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596526A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596522A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596521A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596514A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI596510A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI550756A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 8 (NS)1482.10.000000e+00816/823 (99%)EPI593893A/Guangzhou/39715/2014 (A/H5N6) segment 8 (NS)1476.60.000000e+00815/823 (99%)EPI424666A/duck/Vietnam/NCVD-1940/2012 (A/H5N1) segment 8 (NS)1471.10.000000e+00814/823 (98%)EPI600487A/duck/Nanchang/9789/2013 (A/H5N1) segment 8 (NS)1465.50.000000e+00813/823 (98%)EPI347458A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 8 (NS)1465.50.000000e+00813/823 (98%)EPI600480A/quail/Nanchang/6631/2013 (A/H5N1) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI590888A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI590886A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI590882A/duck/Sichuan/NCXJ15/2014 (A/H5N6) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI585728A/cat/Sichuan/SC18/2014 (A/H5N6) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI533590A/Sichuan/26221/2014 (A/H5N6) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI461759A/duck/Hunan/S4220/2011 (A/H5N1) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI375506A/Hong Kong/5923/2012 (A/H5N1) segment 8 (NS)1460.00.000000e+00812/823 (98%)EPI590885A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 8 (NS)1454.40.000000e+00811/823 (98%)EPI590884A/duck/Sichuan/NCXJ24/2014 (A/H5N6) segment 8 (NS)1454.40.000000e+00811/823 (98%)EPI590883A/duck/Sichuan/NCXJ16/2014 (A/H5N6) segment 8 (NS)1454.40.000000e+00811/823 (98%)EPI590881A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 8 (NS)1454.40.000000e+00811/823 (98%)EPI590880A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 8 (NS)1454.40.000000e+00811/823 (98%)EPI602148A/environment/Jiangxi/10170/2014 (A/H5N6) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI602147A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI602015A/black chicken/Jiangxi/10136/2014 (A/H0) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI602013A/black chicken/Jiangxi/10131/2014 (A/H0) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI590887A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI590879A/Anas_crecca/Hubei/Chenhu1623-5/2014 (A/H5N6) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI585735A/swan goose/Jilin/JL01/2014 (A/H5N6) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI568712A/chicken/Zhejiang/6C2/2013 (A/H5N6) segment 8 (NS)1448.90.000000e+00810/823 (98%)EPI599410A/environment/Jiangxi/10171/2014 (A/H5N6) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI599367A/environment/Jiangxi/10164/2014 (A/H5N6) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI589813A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI589488A/muscovy duck/Quang Ninh/5c112/2013 (A/H5N6) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI589395A/muscovy duck/Quang Ninh/4c111/2013 (A/H5N6) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI568713A/duck/Zhejiang/6D2/2013 (A/H5N6) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI425426A/duck/Vietnam/NCVD-1207/2012 (A/H5N1) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI424356A/duck/Vietnam/NCVD-1206/2012 (A/H5N1) segment 8 (NS)1443.40.000000e+00809/823 (98%)EPI602012A/chicken/Jiangxi/10122/2014 (A/H0) segment 8 (NS)1437.80.000000e+00808/823 (98%)EPI492514A/barn swallow/Hong Kong/1161/2010 (A/H5N1) segment 8 (NS)1437.80.000000e+00808/823 (98%)EPI602185A/duck/Jiangxi/13484/2014 (A/H5N6) segment 8 (NS)1432.30.000000e+00808/824 (98%)EPI602178A/duck/Jiangxi/13475/2014 (A/H5N6) segment 8 (NS)1432.30.000000e+00808/824 (98%)EPI602171A/duck/Jiangxi/13469/2014 (A/H5N6) segment 8 (NS)1432.30.000000e+00808/824 (98%)EPI539364A/Viet Nam/CM32/2011 (A/H5N1) segment 8 (NS)1432.30.000000e+00807/823 (98%)EPI425314A/duck/Vietnam/NCVD-1217/2012 (A/H5N1) segment 8 (NS)1432.30.000000e+00807/823 (98%)EPI425098A/duck/Vietnam/NCVD-1497/2012 (A/H5N1) segment 8 (NS)1432.30.000000e+00807/823 (98%)EPI585972A/chicken/DaLi/302/2014 (A/H5N1) segment 8 (NS)1430.40.000000e+00806/821 (98%)EPI585958A/chicken/TongHai/302/2014 (A/H5N1) segment 8 (NS)1430.40.000000e+00806/821 (98%)EPI475609A/wild duck/Fujian/2/2011 (A/H5N1) segment 8 (NS)1426.70.000000e+00806/823 (97%)EPI475608A/wild duck/Fujian/1/2011 (A/H5N1) segment 8 (NS)1426.70.000000e+00806/823 (97%)EPI425442A/duck/Vietnam/NCVD-1219/2012 (A/H5N1) segment 8 (NS)1426.70.000000e+00806/823 (97%)EPI515019A/duck/Hunan/749/2011 (A/H0) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI515009A/duck/Hunan/747/2011 (A/H0) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI461026A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI438273A/muscovy duck/Vietnam/LBM315/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425933A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425925A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425917A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425682A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425674A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425666A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425650A/duck/Vietnam/NCVD-1968/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425642A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425626A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425594A/duck/Vietnam/NCVD-1463/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425306A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425266A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425194A/duck/Vietnam/NCVD129-7/2011 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425130A/duck/Vietnam/NCVD-1899/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425122A/duck/Vietnam/NCVD-1872/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425018A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424986A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424978A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424738A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424722A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424714A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424706A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424223A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424220A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424216A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI424213A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI337030A/duck/Zhejiang/2248/2011 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI337028A/duck/Zhejiang/2244/2011 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI337027A/duck/Zhejiang/2243/2011 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI337026A/duck/Zhejiang/2242/2011 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI337025A/duck/Zhejiang/224/2011 (A/H5N1) segment 8 (NS)1421.20.000000e+00805/823 (97%)EPI425298A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 8 (NS)1417.50.000000e+00804/823 (97%)EPI620973A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 8 (NS)1415.70.000000e+00806/825 (97%)EPI610340A/chicken/Fujian/FZ02/2011 (A/H9N2) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI603547A/Falcon/Dubai/AR3430-2293/2014 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI503720A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00805/824 (97%)EPI489681A/tiger/Jiangsu/01/2013 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI471180A/muscovy duck/Vietnam/LBM436/2013 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI471154A/muscovy duck/Vietnam/LBM438/2013 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI460963A/muscovy duck/Vietnam/LBM398/2013 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI460960A/muscovy duck/Vietnam/LBM399/2013 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI425618A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI425282A/duck/Vietnam/NCVD-674/2011 (A/H5N1) segment 8 (NS)1415.70.000000e+00806/825 (97%)EPI425274A/duck/Vietnam/NCVD-673/2011 (A/H5N1) segment 8 (NS)1415.70.000000e+00806/825 (97%)EPI425170A/chicken/Vietnam/NCVD-1942/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI425154A/duck/Vietnam/NCVD-1937/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI425146A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI425138A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI425106A/duck/Vietnam/NCVD-1943/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI425010A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI424730A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI424698A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI424682A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI405130A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 8 (NS)1415.70.000000e+00806/825 (97%)EPI337024A/duck/Zhejiang/213/2011 (A/H5N1) segment 8 (NS)1415.70.000000e+00804/823 (97%)EPI585965A/chicken/AnNing/1/2014 (A/H5N1) segment 8 (NS)1413.80.000000e+00803/821 (97%)EPI621180A/chicken/Jiangsu/2477/2014 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI603571A/Quail/Dubai/AR3445-25043/2014 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI603563A/Stone curlew/Dubai/AR3444-25042/2014 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI603555A/Sea Gull/Dubai/AR3443-25041/2014 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI589557A/muscovy duck/Quang Ninh/7c121/2013 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI567058A/muscovy duck/Vietnam/LBM670/2014 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI567057A/muscovy duck/Vietnam/LBM669/2014 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI567032A/muscovy duck/Vietnam/LBM668/2014 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI567031A/muscovy duck/Quang Ninh/48c1-4-1/2013 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI531375A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 8 (NS)1410.10.000000e+00804/824 (97%)EPI461543A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI461495A/duck/Quanh Ninh/53/2013 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI460966A/muscovy duck/Quanh Ninh/49/2013 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI459269A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI459266A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI425634A/duck/Vietnam/NCVD-1931/2012 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI425178A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI424866A/duck/Vietnam/NCVD-1026/2011 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI424858A/duck/Vietnam/NCVD-1025/2011 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI168044A/grey heron/Hong Kong/1046/2008 (A/H5N1) segment 8 (NS)1410.10.000000e+00803/823 (97%)EPI631931A/rook/Sartlan/42/2015 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI631923A/rook/Dovolnoe/50/2015 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI631915A/rook/Chany/32/2015 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI623565A/Falcon/Dubai/2506/2014 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI623549A/Hoabara/Dubai/2455.5/2014 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI589604A/duck/Quang Ninh/15c111/2013 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI500775A/Alberta/01/2014 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI461767A/duck/Hunan/S4234/2011 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI460737A/muscovy duck/Vietnam/LBM335/2013 (A/H5N1) segment 8 (NS)1404.60.000000e+00803/824 (97%)EPI425869A/duck/Vietnam/NCVD-1163/2011 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI425861A/duck/Vietnam/NCVD-1162/2011 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI425853A/duck/Vietnam/NCVD-1161/2011 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI425482A/duck/Vietnam/NCVD-927/2011 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI425226A/duck/Vietnam/NCVD-1160/2011 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI424938A/duck/Vietnam/NCVD-885/2010 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI424388A/duck/Vietnam/NCVD-1283/2012 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI387939A/muscovy duck/Vietnam/LBM66/2011 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI337220A/Guangxi/1/2009 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI280083A/Guangxi/1/2009 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI168052A/magpie robin/Hong Kong/1097/2008 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI168012A/grey heron/Hong Kong/3088/2007 (A/H5N1) segment 8 (NS)1404.60.000000e+00802/823 (97%)EPI623557A/Duck/Dubai/2459/2014 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI567102A/muscovy duck/Long An/90/2014 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI567101A/muscovy duck/Long An/89/2014 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI567100A/muscovy duck/Long An/88/2014 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI567065A/muscovy duck/Long An/87/2014 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI567059A/muscovy duck/Long An/86/2014 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI459329A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI438277A/muscovy duck/Vietnam/LBM295/2012 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI425002A/chicken/Vietnam/NCVD-1437/2012 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI424890A/chicken/Vietnam/NCVD-921/2011 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI424882A/duck/Vietnam/NCVD-920/2011 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI168060A/magpie robin/Hong Kong/1897/2008 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI168036A/great egret/Hong Kong/807/2008 (A/H5N1) segment 8 (NS)1399.00.000000e+00801/823 (97%)EPI567030A/duck/Quang Ninh/13c1-2-1/2013 (A/H5N2) segment 8 (NS)1393.50.000000e+00800/823 (97%)EPI567012A/duck/Vietnam/LBM360c1-4-1/2013 (A/H5N6) segment 8 (NS)1393.50.000000e+00800/823 (97%)EPI425901A/chicken/Vietnam/NCVD-1254/2011 (A/H5N1) segment 8 (NS)1393.50.000000e+00800/823 (97%)EPI168020A/common buzzard/Hong Kong/9213/2007 (A/H5N1) segment 8 (NS)1388.00.000000e+00799/823 (97%)EPI164305A/goose/Yunnan/3798/2006 (A/H5N1) segment 8 (NS)1388.00.000000e+00799/823 (97%)EPI112665A/goose/Guangxi/224/2006 (A/H5N1) segment 8 (NS)1388.00.000000e+00799/823 (97%)EPI335434A/environment/Chang Sha/14/2009 (A/H5N1) segment 8 (NS)1382.40.000000e+00799/824 (96%)EPI227014A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI225092A/duck/Nam Dinh/218/2006 (A/H5) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI224969A/chicken/Hong Kong/D-06-0947/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI221901A/duck/Hunan/3/2007 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI221748A/chicken/Hunan/3/2007 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170745A/Laos/Nong Khai 1/2007 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170718A/chicken/Vietnam/202/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170662A/chicken/Vietnam/209/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170654A/duck/Vietnam/210/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170647A/Muscovy duck/Vietnam/211/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170640A/chicken/Vietnam/212/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170633A/Muscovy duck/Vietnam/213/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170626A/duck/Vietnam/215/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170619A/chicken/Vietnam/216/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170611A/Muscovy duck/Vietnam/217/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170603A/duck/Vietnam/218/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI170595A/duck/Vietnam/219/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI168004A/little egret/Hong Kong/8863/2007 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI167996A/little egret/Hong Kong/8550/2007 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI167988A/house crow/Hong Kong/5288/2007 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112974A/goose/Guangxi/1458/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112968A/duck/Guangxi/1258/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112965A/chicken/Guangxi/1212/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112662A/duck/Guangxi/150/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112653A/duck/Guangxi/5270/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112650A/duck/Guangxi/5165/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112632A/goose/Guangxi/4289/2005 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112590A/chicken/Hong Kong/947/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112587A/little egret/Hong Kong/718/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI112575A/chicken/Hong Kong/282/2006 (A/H5N1) segment 8 (NS)1382.40.000000e+00798/823 (96%)EPI349981A/chicken/Vietnam/NCVD-109/2007 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI337943A/Guangxi/1/2005 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI337131A/Guangdong/2/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI280020A/Guangdong/2/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI275466A/Guangxi/1/2005 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI270192A/Vietnam/UT30850/2005 (A/H5N1) segment 8 (NS)1376.90.000000e+00795/820 (96%)EPI222038A/environment/Hunan/5-32/2007 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI222030A/environment/Hunan/5-25/2007 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI221584A/Daurian starling/Hong Kong/1532/2007 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI220542A/environment/Hunan/7-73/2008 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI220275A/black-crowned night heron/Hong Kong/659/2008 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI180867A/duck/Laos/A0503/2007 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI167893A/peregrine falcon/Hong Kong/1143/2007 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI126689A/human/China/GD02/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI113324A/Shenzhen/406H/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112986A/goose/Guangxi/1898/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112980A/goose/Guangxi/1633/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112977A/duck/Guangxi/1550/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112929A/duck/Guiyang/1558/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112926A/goose/Guiyang/1461/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112668A/duck/Guangxi/288/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112659A/duck/Guangxi/5457/2005 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112641A/duck/Guangxi/4830/2005 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112638A/goose/Guangxi/4513/2005 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112635A/duck/Guangxi/4428/2005 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112578A/magpie robin/Hong Kong/366/2006 (A/H5N1) segment 8 (NS)1376.90.000000e+00797/823 (96%)EPI112725A/duck/Hunan/5106/2005 (A/H5N1) segment 8 (NS)1375.00.000000e+00794/819 (96%)EPI276034A/duck/Yunnan/47/2006 (A/H5N1) segment 8 (NS)1371.30.000000e+00796/823 (96%)EPI276002A/duck/Hunan/29/2006 (A/H5N1) segment 8 (NS)1371.30.000000e+00796/823 (96%)

  14. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI645038A/swine/Guangdong/1/2014 (A/H5N6) segment 5 (NP)2765.60.000000e+001497/1497 (100%)EPI602420A/chicken/Dongguan/3363/2013 (A/H5N6) segment 5 (NP)2765.60.000000e+001497/1497 (100%)EPI602492A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 5 (NP)2760.00.000000e+001496/1497 (99%)EPI602413A/chicken/Dongguan/2690/2013 (A/H5N6) segment 5 (NP)2760.00.000000e+001496/1497 (99%)EPI599321A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 5 (NP)2760.00.000000e+001496/1497 (99%)EPI599293A/chicken/Shenzhen/552/2013 (A/H5N6) segment 5 (NP)2760.00.000000e+001496/1497 (99%)EPI599340A/duck/Dongguan/3069/2013 (A/H5N6) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI599328A/duck/Dongguan/2685/2013 (A/H5N6) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI599300A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI530064A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI530055A/duck/Jiangxi/95/2014 (A/H5N6) segment 5 (NP)2754.50.000000e+001495/1497 (99%)EPI645045A/swine/Guangdong/2/2014 (A/H5N6) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI602478A/chicken/Shenzhen/715/2013 (A/H5N6) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI599286A/chicken/Shenzhen/433/2013 (A/H5N6) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI593897A/duck/Guangzhou/41227/2014 (A/H5N6) segment 5 (NP)2748.90.000000e+001494/1497 (99%)EPI602485A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI599347A/chicken/Dongguan/4259/2013 (A/H5N6) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI599314A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 5 (NP)2743.40.000000e+001493/1497 (99%)EPI599656A/goose/Shantou/1791/2014 (A/H5N6) segment 5 (NP)2737.90.000000e+001492/1497 (99%)EPI599649A/goose/Shantou/1763/2014 (A/H5N6) segment 5 (NP)2737.90.000000e+001492/1497 (99%)EPI599663A/goose/Shantou/1806/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI599334A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596623A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596617A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596611A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596605A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596599A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596593A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596587A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596581A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI596575A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI550764A/duck/Laos/XBY004/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI550753A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI531457A/duck/Guangdong/GD01/2014 (A/H5N6) segment 5 (NP)2732.30.000000e+001491/1497 (99%)EPI593890A/Guangzhou/39715/2014 (A/H5N6) segment 5 (NP)2721.20.000000e+001489/1497 (99%)EPI615108A/duck/Guangxi/175D12/2014 (A/H3N6) segment 5 (NP)2715.70.000000e+001488/1497 (99%)EPI590878A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 5 (NP)2715.70.000000e+001488/1497 (99%)EPI590877A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 5 (NP)2715.70.000000e+001488/1497 (99%)EPI590876A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 5 (NP)2710.20.000000e+001487/1497 (99%)EPI590807A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 5 (NP)2710.20.000000e+001487/1497 (99%)EPI585962A/chicken/AnNing/1/2014 (A/H5N1) segment 5 (NP)2708.30.000000e+001486/1496 (99%)EPI585952A/chicken/TongHai/302/2014 (A/H5N1) segment 5 (NP)2708.30.000000e+001486/1496 (99%)EPI590814A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 5 (NP)2704.60.000000e+001486/1497 (99%)EPI424665A/duck/Vietnam/NCVD-1940/2012 (A/H5N1) segment 5 (NP)2704.60.000000e+001486/1497 (99%)EPI559117A/chicken/Vietnam/NCVD-KA423/2013 (A/H5N1) segment 5 (NP)2693.50.000000e+001484/1497 (99%)EPI347307A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 5 (NP)2693.50.000000e+001484/1497 (99%)EPI600484A/duck/Nanchang/9789/2013 (A/H5N1) segment 5 (NP)2688.00.000000e+001483/1497 (99%)EPI585969A/chicken/DaLi/302/2014 (A/H5N1) segment 5 (NP)2686.10.000000e+001482/1496 (99%)EPI600477A/quail/Nanchang/6631/2013 (A/H5N1) segment 5 (NP)2682.50.000000e+001482/1497 (98%)EPI602182A/duck/Jiangxi/13484/2014 (A/H5N6) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI602175A/duck/Jiangxi/13475/2014 (A/H5N6) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI602168A/duck/Jiangxi/13469/2014 (A/H5N6) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI568711A/duck/Zhejiang/6D2/2013 (A/H5N6) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI568710A/chicken/Zhejiang/6C2/2013 (A/H5N6) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI461756A/duck/Hunan/S4220/2011 (A/H5N1) segment 5 (NP)2649.20.000000e+001476/1497 (98%)EPI610339A/chicken/Fujian/FZ02/2011 (A/H9N2) segment 5 (NP)2643.70.000000e+001475/1497 (98%)EPI599307A/chicken/Shenzhen/1845/2013 (A/H5N6) segment 5 (NP)2643.70.000000e+001475/1497 (98%)EPI590869A/Anas_crecca/Hubei/Chenhu1623-5/2014 (A/H5N6) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI337009A/duck/Zhejiang/2248/2011 (A/H5N1) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI337007A/duck/Zhejiang/2244/2011 (A/H5N1) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI337006A/duck/Zhejiang/2243/2011 (A/H5N1) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI337004A/duck/Zhejiang/224/2011 (A/H5N1) segment 5 (NP)2638.10.000000e+001474/1497 (98%)EPI590875A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI590871A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI590870A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI533588A/Sichuan/26221/2014 (A/H5N6) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI515015A/duck/Hunan/749/2011 (A/H0) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI515005A/duck/Hunan/747/2011 (A/H0) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI337005A/duck/Zhejiang/2242/2011 (A/H5N1) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI337003A/duck/Zhejiang/213/2011 (A/H5N1) segment 5 (NP)2632.60.000000e+001473/1497 (98%)EPI602108A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI599370A/environment/Jiangxi/10171/2014 (A/H5N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI599361A/environment/Jiangxi/10164/2014 (A/H5N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI590874A/duck/Sichuan/NCXJ24/2014 (A/H5N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI590873A/duck/Sichuan/NCXJ16/2014 (A/H5N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI590872A/duck/Sichuan/NCXJ15/2014 (A/H5N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI585725A/cat/Sichuan/SC18/2014 (A/H5N6) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI461764A/duck/Hunan/S4234/2011 (A/H5N1) segment 5 (NP)2627.10.000000e+001472/1497 (98%)EPI620838A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI602114A/environment/Jiangxi/10170/2014 (A/H5N6) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI559123A/duck/Vietnam/NCVD-A672/2011 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI559119A/chicken/Vietnam/NCVD-KA435/2013 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI438143A/muscovy duck/Vietnam/LBM315/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425681A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425673A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425641A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425625A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425617A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425593A/duck/Vietnam/NCVD-1463/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425281A/duck/Vietnam/NCVD-674/2011 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI425193A/duck/Vietnam/NCVD129-7/2011 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI424977A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI424937A/duck/Vietnam/NCVD-885/2010 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI424865A/duck/Vietnam/NCVD-1026/2011 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI424857A/duck/Vietnam/NCVD-1025/2011 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI424737A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI424189A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI424181A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI405129A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 5 (NP)2621.50.000000e+001471/1497 (98%)EPI599354A/duck/Jiangxi/10160/2014 (A/H5N6) segment 5 (NP)2617.80.000000e+001470/1497 (98%)EPI589374A/muscovy duck/Quang Ninh/5c112/2013 (A/H5N6) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI559112A/duck/Vietnam/NCVD-KA262/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001471/1498 (98%)EPI531380A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI461023A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI438151A/muscovy duck/Vietnam/LBM295/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425916A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425633A/duck/Vietnam/NCVD-1931/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425305A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001471/1498 (98%)EPI425273A/duck/Vietnam/NCVD-673/2011 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425177A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425153A/duck/Vietnam/NCVD-1937/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425137A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425105A/duck/Vietnam/NCVD-1943/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI425017A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001471/1498 (98%)EPI425009A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001471/1498 (98%)EPI424985A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI424729A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI424197A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI424173A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 5 (NP)2616.00.000000e+001470/1497 (98%)EPI567071A/muscovy duck/Vietnam/LBM670/2014 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI567051A/muscovy duck/Vietnam/LBM669/2014 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI567045A/muscovy duck/Vietnam/LBM668/2014 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI559115A/duck/Vietnam/NCVD-KA311/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI503723A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI460731A/muscovy duck/Vietnam/LBM335/2013 (A/H5N1) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI459865A/muscovy duck/Vietnam/LBM330/2013 (A/H5N1) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI425932A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI425924A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI425665A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI425297A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI425265A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI425169A/chicken/Vietnam/NCVD-1942/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI425129A/duck/Vietnam/NCVD-1899/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI425097A/duck/Vietnam/NCVD-1497/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI424721A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI424713A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI424705A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI424697A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001470/1498 (98%)EPI424681A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 5 (NP)2610.40.000000e+001469/1497 (98%)EPI589830A/muscovy duck/Quang Ninh/7c121/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI567038A/muscovy duck/Quang Ninh/48c1-4-1/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001470/1499 (98%)EPI559118A/chicken/Vietnam/NCVD-KA432/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI559111A/duck/Vietnam/NCVD-KA261/2012 (A/H5N1) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI489678A/tiger/Jiangsu/01/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI461489A/duck/Quanh Ninh/53/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001470/1499 (98%)EPI460933A/muscovy duck/Quanh Ninh/49/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001470/1499 (98%)EPI459258A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001469/1498 (98%)EPI459248A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI459240A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI425145A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 5 (NP)2604.90.000000e+001468/1497 (98%)EPI425121A/duck/Vietnam/NCVD-1872/2012 (A/H5N1) segment 5 (NP)2604.90.000000e+001469/1498 (98%)EPI601979A/black chicken/Jiangxi/10131/2014 (A/H0) segment 5 (NP)2601.20.000000e+001458/1483 (98%)EPI589842A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 5 (NP)2601.20.000000e+001470/1500 (98%)EPI589367A/muscovy duck/Quang Ninh/4c111/2013 (A/H5N6) segment 5 (NP)2601.20.000000e+001470/1500 (98%)EPI589836A/duck/Quang Ninh/15c111/2013 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI567021A/duck/Quang Ninh/13c1-2-1/2013 (A/H5N2) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI567004A/duck/Vietnam/LBM360c1-4-1/2013 (A/H5N6) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI559113A/duck/Vietnam/NCVD-KA309/2012 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI559107A/duck/Vietnam/NCVD-KA250/2012 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI559103A/duck/Vietnam/NCVD-KA25/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI475612A/wild duck/Fujian/2/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI425900A/chicken/Vietnam/NCVD-1254/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI425868A/duck/Vietnam/NCVD-1163/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI425860A/duck/Vietnam/NCVD-1162/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI425852A/duck/Vietnam/NCVD-1161/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI425481A/duck/Vietnam/NCVD-927/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI425225A/duck/Vietnam/NCVD-1160/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI387936A/muscovy duck/Vietnam/LBM66/2011 (A/H5N1) segment 5 (NP)2599.40.000000e+001467/1497 (97%)EPI500774A/Alberta/01/2014 (A/H5N1) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI475604A/wild duck/Fujian/1/2011 (A/H5N1) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI471174A/muscovy duck/Vietnam/LBM436/2013 (A/H5N1) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI471132A/muscovy duck/Vietnam/LBM438/2013 (A/H5N1) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI461537A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI460949A/muscovy duck/Vietnam/LBM399/2013 (A/H5N1) segment 5 (NP)2593.80.000000e+001467/1498 (97%)EPI460941A/muscovy duck/Vietnam/LBM398/2013 (A/H5N1) segment 5 (NP)2593.80.000000e+001467/1498 (97%)EPI424889A/chicken/Vietnam/NCVD-921/2011 (A/H5N1) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI424881A/duck/Vietnam/NCVD-920/2011 (A/H5N1) segment 5 (NP)2593.80.000000e+001466/1497 (97%)EPI621168A/chicken/Jiangsu/927/2013 (A/H5N1) segment 5 (NP)2588.30.000000e+001465/1497 (97%)EPI559206A/duck/Vietnam/NCVD-KA415/2012 (A/H5N2) segment 5 (NP)2588.30.000000e+001465/1497 (97%)EPI425649A/duck/Vietnam/NCVD-1968/2012 (A/H5N1) segment 5 (NP)2588.30.000000e+001465/1497 (97%)EPI375504A/Hong Kong/5923/2012 (A/H5N1) segment 5 (NP)2588.30.000000e+001465/1497 (97%)EPI547403A/environment/Zhenjiang/C13/2013 (A/H5N6) segment 5 (NP)2582.70.000000e+001465/1498 (97%)EPI425001A/chicken/Vietnam/NCVD-1437/2012 (A/H5N1) segment 5 (NP)2582.70.000000e+001464/1497 (97%)EPI168049A/magpie robin/Hong Kong/1097/2008 (A/H5N1) segment 5 (NP)2582.70.000000e+001464/1497 (97%)EPI621178A/chicken/Jiangsu/2477/2014 (A/H5N1) segment 5 (NP)2577.20.000000e+001463/1497 (97%)EPI168057A/magpie robin/Hong Kong/1897/2008 (A/H5N1) segment 5 (NP)2577.20.000000e+001463/1497 (97%)EPI424387A/duck/Vietnam/NCVD-1283/2012 (A/H5N1) segment 5 (NP)2571.70.000000e+001462/1497 (97%)EPI567117A/muscovy duck/Long An/90/2014 (A/H5N1) segment 5 (NP)2560.60.000000e+001461/1498 (97%)EPI567110A/muscovy duck/Long An/89/2014 (A/H5N1) segment 5 (NP)2560.60.000000e+001461/1498 (97%)EPI567090A/muscovy duck/Long An/88/2014 (A/H5N1) segment 5 (NP)2560.60.000000e+001461/1498 (97%)EPI567085A/muscovy duck/Long An/87/2014 (A/H5N1) segment 5 (NP)2560.60.000000e+001461/1498 (97%)EPI567078A/muscovy duck/Long An/86/2014 (A/H5N1) segment 5 (NP)2560.60.000000e+001461/1498 (97%)EPI602030A/chicken/Dongguan/4190/2013 (A/H0) segment 5 (NP)2556.90.000000e+001384/1384 (100%)EPI603546A/Falcon/Dubai/AR3430-2293/2014 (A/H5N1) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI492515A/barn swallow/Hong Kong/1161/2010 (A/H5N1) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI168041A/grey heron/Hong Kong/1046/2008 (A/H5N1) segment 5 (NP)2555.00.000000e+001459/1497 (97%)EPI631932A/rook/Sartlan/42/2015 (A/H5N1) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI631924A/rook/Dovolnoe/50/2015 (A/H5N1) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI631916A/rook/Chany/32/2015 (A/H5N1) segment 5 (NP)2544.00.000000e+001457/1497 (97%)EPI567304A/chicken/Nigeria/15VIR339-2/2015 (A/H5N1) segment 5 (NP)2542.10.000000e+001456/1496 (97%)EPI337218A/Guangxi/1/2009 (A/H5N1) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI280082A/Guangxi/1/2009 (A/H5N1) segment 5 (NP)2538.40.000000e+001456/1497 (97%)EPI220272A/black-crowned night heron/Hong Kong/659/2008 (A/H5N1) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI168009A/grey heron/Hong Kong/3088/2007 (A/H5N1) segment 5 (NP)2532.90.000000e+001455/1497 (97%)EPI623564A/Falcon/Dubai/2506/2014 (A/H5N1) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI623556A/Duck/Dubai/2459/2014 (A/H5N1) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI623548A/Hoabara/Dubai/2455.5/2014 (A/H5N1) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI603562A/Stone curlew/Dubai/AR3444-25042/2014 (A/H5N1) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI603554A/Sea Gull/Dubai/AR3443-25041/2014 (A/H5N1) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI168033A/great egret/Hong Kong/807/2008 (A/H5N1) segment 5 (NP)2527.30.000000e+001454/1497 (97%)EPI603570A/Quail/Dubai/AR3445-25043/2014 (A/H5N1) segment 5 (NP)2521.80.000000e+001453/1497 (97%)EPI355444A/swan/Shanghai/10/2009 (A/H5N1) segment 5 (NP)2516.30.000000e+001452/1497 (96%)EPI337304A/water/Xinjiang/3/2009 (A/H5N1) segment 5 (NP)2510.70.000000e+001451/1497 (96%)EPI280249A/water/Xinjiang/3/2009 (A/H5N1) segment 5 (NP)2510.70.000000e+001451/1497 (96%)EPI167993A/little egret/Hong Kong/8550/2007 (A/H5N1) segment 5 (NP)2510.70.000000e+001451/1497 (96%)EPI585732A/swan goose/Jilin/JL01/2014 (A/H5N6) segment 5 (NP)2505.20.000000e+001450/1497 (96%)EPI383172A/chicken/Jiangsu/k0402/2010 (A/H5N1) segment 5 (NP)2505.20.000000e+001450/1497 (96%)EPI168017A/common buzzard/Hong Kong/9213/2007 (A/H5N1) segment 5 (NP)2505.20.000000e+001450/1497 (96%)EPI414139A/duck/Jiangsu/26/2004 (A/H3N2) segment 5 (NP)2499.60.000000e+001449/1497 (96%)EPI337204A/Xinjiang/1/2009 (A/H5N1) segment 5 (NP)2499.60.000000e+001449/1497 (96%)EPI280068A/Xinjiang/1/2009 (A/H5N1) segment 5 (NP)2499.60.000000e+001449/1497 (96%)EPI647722A/duck/Vietnam/HU1-1511/2014 (A/H5N6) segment 5 (NP)2497.80.000000e+001402/1427 (98%)EPI553318A/Duck/Shandong/Y02/2009 (A/H5N1) segment 5 (NP)2490.40.000000e+001446/1495 (96%)EPI553310A/Duck/Shandong/Y01/2009 (A/H5N1) segment 5 (NP)2490.40.000000e+001446/1495 (96%)EPI167891A/peregrine falcon/Hong Kong/1143/2007 (A/H5N1) segment 5 (NP)2488.60.000000e+001447/1497 (96%)EPI475572A/wild duck/Shandong/2/2011 (A/H5N1) segment 5 (NP)2483.00.000000e+001446/1497 (96%)EPI112261A/magpie robin/Hong Kong/75/2006 (A/H5N1) segment 5 (NP)2483.00.000000e+001444/1494 (96%)EPI337129A/Guangdong/2/2006 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI280019A/Guangdong/2/2006 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI225084A/duck/Hai Phong /208/2006 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI170717A/chicken/Vietnam/202/2005 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI170693A/duck/Vietnam/205/2005 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI170677A/duck/Vietnam/207/2005 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI170669A/duck/Vietnam/208/2005 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI170625A/duck/Vietnam/215/2005 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI164302A/goose/Yunnan/3798/2006 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI126695A/human/China/GD02/2006 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI112321A/duck/Guangxi/150/2006 (A/H5N1) segment 5 (NP)2477.50.000000e+001443/1494 (96%)EPI112313A/duck/Guangxi/5165/2005 (A/H5N1) segment 5 (NP)2477.50.000000e+001445/1497 (96%)EPI112307A/duck/Guangxi/4830/2005 (A/H5N1) segment 5 (NP)2477.50.000000e+001443/1494 (96%)EPI647723A/environment/Vietnam/HU1-1434/2014 (A/H5N6) segment 5 (NP)2473.80.000000e+001395/1423 (98%)EPI337941A/Guangxi/1/2005 (A/H5N1) segment 5 (NP)2473.80.000000e+001443/1495 (96%)EPI620804A/duck/Vietnam NamDinh/NCVD-88/2007 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)EPI559124A/chicken/Vietnam/NCVD-A675/2011 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)EPI406385A/chicken/Ha Tay/44/2007 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)EPI286564A/muscovy duck/Ha Nam/07-47/2007 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)EPI286171A/duck/Nam Dinh/07-55/2007 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)EPI270197A/Vietnam/UT31203A/2007 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)EPI227013A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)EPI170661A/chicken/Vietnam/209/2005 (A/H5N1) segment 5 (NP)2471.90.000000e+001444/1497 (96%)

  15. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI644692A/swine/Guangdong/1/2014 (A/H5N6) segment 3 (PA)3973.30.000000e+002151/2151 (100%)EPI644693A/swine/Guangdong/2/2014 (A/H5N6) segment 3 (PA)3956.60.000000e+002148/2151 (99%)EPI599258A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 3 (PA)3951.10.000000e+002147/2151 (99%)EPI598629A/chicken/Dongguan/3363/2013 (A/H5N6) segment 3 (PA)3951.10.000000e+002147/2151 (99%)EPI598626A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 3 (PA)3945.60.000000e+002146/2151 (99%)EPI599253A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 3 (PA)3941.90.000000e+002145/2151 (99%)EPI599259A/duck/Dongguan/3069/2013 (A/H5N6) segment 3 (PA)3940.00.000000e+002145/2151 (99%)EPI599257A/duck/Dongguan/2685/2013 (A/H5N6) segment 3 (PA)3940.00.000000e+002145/2151 (99%)EPI599279A/chicken/Shenzhen/552/2013 (A/H5N6) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI599256A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI598628A/chicken/Dongguan/2690/2013 (A/H5N6) segment 3 (PA)3934.50.000000e+002144/2151 (99%)EPI599252A/chicken/Shenzhen/433/2013 (A/H5N6) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI598627A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI598625A/chicken/Shenzhen/715/2013 (A/H5N6) segment 3 (PA)3928.90.000000e+002143/2151 (99%)EPI599260A/chicken/Dongguan/4259/2013 (A/H5N6) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI599255A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI530053A/duck/Jiangxi/95/2014 (A/H5N6) segment 3 (PA)3923.40.000000e+002142/2151 (99%)EPI568439A/goose/Shantou/1806/2014 (A/H5N6) segment 3 (PA)3917.90.000000e+002141/2151 (99%)EPI531455A/duck/Guangdong/GD01/2014 (A/H5N6) segment 3 (PA)3917.90.000000e+002141/2151 (99%)EPI590803A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 3 (PA)3912.30.000000e+002140/2151 (99%)EPI590802A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 3 (PA)3912.30.000000e+002140/2151 (99%)EPI568438A/goose/Shantou/1791/2014 (A/H5N6) segment 3 (PA)3912.30.000000e+002140/2151 (99%)EPI568437A/goose/Shantou/1763/2014 (A/H5N6) segment 3 (PA)3912.30.000000e+002140/2151 (99%)EPI585975A/chicken/AnNing/1/2014 (A/H5N1) segment 3 (PA)3906.80.000000e+002139/2151 (99%)EPI585957A/chicken/TongHai/302/2014 (A/H5N1) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI549735A/duck/Laos/XBY004/2014 (A/H5N6) segment 3 (PA)3901.20.000000e+002138/2151 (99%)EPI549734A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 3 (PA)3899.40.000000e+002137/2150 (99%)EPI590835A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 3 (PA)3895.70.000000e+002137/2151 (99%)EPI596609A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI590834A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 3 (PA)3890.20.000000e+002136/2151 (99%)EPI596597A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 3 (PA)3886.50.000000e+002135/2151 (99%)EPI596591A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 3 (PA)3886.50.000000e+002135/2151 (99%)EPI596579A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 3 (PA)3886.50.000000e+002135/2151 (99%)EPI596573A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 3 (PA)3886.50.000000e+002135/2151 (99%)EPI596621A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI596615A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI596603A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI596585A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI576170A/duck/Guangzhou/41227/2014 (A/H5N6) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI424668A/duck/Vietnam/NCVD-1940/2012 (A/H5N1) segment 3 (PA)3884.60.000000e+002135/2151 (99%)EPI576169A/Guangzhou/39715/2014 (A/H5N6) segment 3 (PA)3879.10.000000e+002134/2151 (99%)EPI585978A/chicken/DaLi/302/2014 (A/H5N1) segment 3 (PA)3873.50.000000e+002133/2151 (99%)EPI598311A/quail/Nanchang/6631/2013 (A/H5N1) segment 3 (PA)3868.00.000000e+002132/2151 (99%)EPI590833A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI557749A/chicken/Vietnam/NCVD-KA423/2013 (A/H5N1) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI461825A/duck/Hunan/S4220/2011 (A/H5N1) segment 3 (PA)3862.50.000000e+002131/2151 (99%)EPI598312A/duck/Nanchang/9789/2013 (A/H5N1) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI375503A/Hong Kong/5923/2012 (A/H5N1) segment 3 (PA)3856.90.000000e+002130/2151 (99%)EPI568709A/chicken/Zhejiang/6C2/2013 (A/H5N6) segment 3 (PA)3834.80.000000e+002126/2151 (98%)EPI599254A/chicken/Shenzhen/1845/2013 (A/H5N6) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI569709A/duck/Zhejiang/6D2/2013 (A/H5N6) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI492512A/barn swallow/Hong Kong/1161/2010 (A/H5N1) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI425276A/duck/Vietnam/NCVD-673/2011 (A/H5N1) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI405132A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 3 (PA)3829.20.000000e+002125/2151 (98%)EPI599263A/environment/Jiangxi/10171/2014 (A/H5N6) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI599262A/environment/Jiangxi/10164/2014 (A/H5N6) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI599261A/duck/Jiangxi/10160/2014 (A/H5N6) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI590827A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI568398A/black chicken/Jiangxi/10131/2014 (A/H0) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI568382A/environment/Jiangxi/10170/2014 (A/H5N6) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI568381A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI557755A/duck/Vietnam/NCVD-A672/2011 (A/H5N1) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI547394A/environment/Zhenjiang/C13/2013 (A/H5N6) segment 3 (PA)3823.70.000000e+002124/2151 (98%)EPI347460A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 3 (PA)3821.80.000000e+002114/2137 (98%)EPI590831A/duck/Sichuan/NCXJ16/2014 (A/H5N6) segment 3 (PA)3818.10.000000e+002123/2151 (98%)EPI590830A/duck/Sichuan/NCXJ24/2014 (A/H5N6) segment 3 (PA)3818.10.000000e+002123/2151 (98%)EPI590829A/duck/Sichuan/NCXJ15/2014 (A/H5N6) segment 3 (PA)3818.10.000000e+002123/2151 (98%)EPI568399A/black chicken/Jiangxi/10136/2014 (A/H0) segment 3 (PA)3818.10.000000e+002123/2151 (98%)EPI590832A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI585721A/swan goose/Jilin/JL01/2014 (A/H5N6) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI438916A/duck/Vietnam/NCVD-927/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI425871A/duck/Vietnam/NCVD-1163/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002123/2152 (98%)EPI425228A/duck/Vietnam/NCVD-1160/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002123/2152 (98%)EPI336995A/duck/Zhejiang/2248/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI336993A/duck/Zhejiang/2244/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI336992A/duck/Zhejiang/2243/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI336991A/duck/Zhejiang/2242/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI336990A/duck/Zhejiang/224/2011 (A/H5N1) segment 3 (PA)3812.60.000000e+002122/2151 (98%)EPI424884A/duck/Vietnam/NCVD-920/2011 (A/H5N1) segment 3 (PA)3808.90.000000e+002121/2151 (98%)EPI568379A/duck/Jiangxi/13484/2014 (A/H5N6) segment 3 (PA)3807.10.000000e+002121/2151 (98%)EPI568378A/duck/Jiangxi/13475/2014 (A/H5N6) segment 3 (PA)3807.10.000000e+002121/2151 (98%)EPI557737A/duck/Vietnam/NCVD-KA25/2011 (A/H5N1) segment 3 (PA)3807.10.000000e+002122/2152 (98%)EPI533587A/Sichuan/26221/2014 (A/H5N6) segment 3 (PA)3807.10.000000e+002121/2151 (98%)EPI425863A/duck/Vietnam/NCVD-1162/2011 (A/H5N1) segment 3 (PA)3807.10.000000e+002122/2152 (98%)EPI425855A/duck/Vietnam/NCVD-1161/2011 (A/H5N1) segment 3 (PA)3807.10.000000e+002122/2152 (98%)EPI424868A/duck/Vietnam/NCVD-1026/2011 (A/H5N1) segment 3 (PA)3807.10.000000e+002121/2151 (98%)EPI424860A/duck/Vietnam/NCVD-1025/2011 (A/H5N1) segment 3 (PA)3807.10.000000e+002121/2151 (98%)EPI610341A/chicken/Fujian/FZ02/2011 (A/H9N2) segment 3 (PA)3801.50.000000e+002121/2152 (98%)EPI590826A/Anas_crecca/Hubei/Chenhu1623-5/2014 (A/H5N6) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI568377A/duck/Jiangxi/13469/2014 (A/H5N6) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI424940A/duck/Vietnam/NCVD-885/2010 (A/H5N1) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI424892A/chicken/Vietnam/NCVD-921/2011 (A/H5N1) segment 3 (PA)3801.50.000000e+002120/2151 (98%)EPI585720A/cat/Sichuan/SC18/2014 (A/H5N6) segment 3 (PA)3796.00.000000e+002119/2151 (98%)EPI425596A/duck/Vietnam/NCVD-1463/2012 (A/H5N1) segment 3 (PA)3796.00.000000e+002120/2152 (98%)EPI425196A/duck/Vietnam/NCVD129-7/2011 (A/H5N1) segment 3 (PA)3796.00.000000e+002120/2152 (98%)EPI336989A/duck/Zhejiang/213/2011 (A/H5N1) segment 3 (PA)3796.00.000000e+002119/2151 (98%)EPI590828A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 3 (PA)3790.40.000000e+002118/2151 (98%)EPI589840A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 3 (PA)3790.40.000000e+002118/2151 (98%)EPI589372A/muscovy duck/Quang Ninh/5c112/2013 (A/H5N6) segment 3 (PA)3790.40.000000e+002118/2151 (98%)EPI589348A/muscovy duck/Quang Ninh/4c111/2013 (A/H5N6) segment 3 (PA)3790.40.000000e+002118/2151 (98%)EPI425903A/chicken/Vietnam/NCVD-1254/2011 (A/H5N1) segment 3 (PA)3790.40.000000e+002119/2152 (98%)EPI424390A/duck/Vietnam/NCVD-1283/2012 (A/H5N1) segment 3 (PA)3790.40.000000e+002119/2152 (98%)EPI425004A/chicken/Vietnam/NCVD-1437/2012 (A/H5N1) segment 3 (PA)3784.90.000000e+002118/2152 (98%)EPI337216A/Guangxi/1/2009 (A/H5N1) segment 3 (PA)3784.90.000000e+002117/2151 (98%)EPI280084A/Guangxi/1/2009 (A/H5N1) segment 3 (PA)3784.90.000000e+002117/2151 (98%)EPI168039A/grey heron/Hong Kong/1046/2008 (A/H5N1) segment 3 (PA)3784.90.000000e+002117/2151 (98%)EPI475602A/wild duck/Fujian/1/2011 (A/H5N1) segment 3 (PA)3779.40.000000e+002116/2151 (98%)EPI585375A/duck/Vietnam/1151/2014 (A/H5N6) segment 3 (PA)3773.80.000000e+002115/2151 (98%)EPI475614A/wild duck/Fujian/2/2011 (A/H5N1) segment 3 (PA)3773.80.000000e+002115/2151 (98%)EPI168055A/magpie robin/Hong Kong/1897/2008 (A/H5N1) segment 3 (PA)3762.70.000000e+002113/2151 (98%)EPI168047A/magpie robin/Hong Kong/1097/2008 (A/H5N1) segment 3 (PA)3762.70.000000e+002113/2151 (98%)EPI168007A/grey heron/Hong Kong/3088/2007 (A/H5N1) segment 3 (PA)3762.70.000000e+002113/2151 (98%)EPI645775A/muscovy duck/Vietnam/HU1-1144/2014 (A/H5N6) segment 3 (PA)3751.70.000000e+002111/2151 (98%)EPI168031A/great egret/Hong Kong/807/2008 (A/H5N1) segment 3 (PA)3740.60.000000e+002109/2151 (98%)EPI620868A/chicken/Vietnam/NCVD-398/2010 (A/H5N1) segment 3 (PA)3718.40.000000e+002105/2151 (97%)EPI350441A/chicken/Vietnam/NCVD-399/2010 (A/H5N1) segment 3 (PA)3718.40.000000e+002105/2151 (97%)EPI620844A/chicken/Vietnam/NCVD-421/2010 (A/H5N1) segment 3 (PA)3712.90.000000e+002104/2151 (97%)EPI350488A/chicken/Vietnam/NCVD-421/2010 (A/H5N1) segment 3 (PA)3712.90.000000e+002104/2151 (97%)EPI350433A/chicken/Vietnam/NCVD-398/2010 (A/H5N1) segment 3 (PA)3711.00.000000e+002103/2151 (97%)EPI337230A/Hubei/1/2010 (A/H5N1) segment 3 (PA)3707.30.000000e+002103/2151 (97%)EPI267028A/Hubei/1/2010 (A/H5N1) segment 3 (PA)3707.30.000000e+002103/2151 (97%)EPI530061A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 3 (PA)3701.80.000000e+002105/2154 (97%)EPI425500A/duck/Vietnam/NCVD-946/2011 (A/H5N1) segment 3 (PA)3701.80.000000e+002103/2152 (97%)EPI348919A/duck/Vietnam/NCVD-431/2010 (A/H5N1) segment 3 (PA)3701.80.000000e+002102/2151 (97%)EPI425428A/duck/Vietnam/NCVD-1207/2012 (A/H5N1) segment 3 (PA)3696.30.000000e+002101/2151 (97%)EPI424916A/duck/Vietnam/NCVD-945/2011 (A/H5N1) segment 3 (PA)3696.30.000000e+002102/2152 (97%)EPI350147A/chicken/Vietnam/NCVD-389/2009 (A/H5N1) segment 3 (PA)3696.30.000000e+002101/2151 (97%)EPI427349A/chicken/Vietnam/NCVD-668/2010 (A/H5N1) segment 3 (PA)3690.70.000000e+002100/2151 (97%)EPI425767A/duck/Vietnam/NCVD-671/2011 (A/H5N1) segment 3 (PA)3690.70.000000e+002100/2151 (97%)EPI425292A/duck/Vietnam/NCVD-669/2011 (A/H5N1) segment 3 (PA)3690.70.000000e+002100/2151 (97%)EPI424358A/duck/Vietnam/NCVD-1206/2012 (A/H5N1) segment 3 (PA)3690.70.000000e+002100/2151 (97%)EPI351365A/duck/Vietnam/NCVD-423/2010 (A/H5N1) segment 3 (PA)3690.70.000000e+002101/2152 (97%)EPI515025A/duck/Hunan/749/2011 (A/H0) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI515022A/duck/Hunan/747/2011 (A/H0) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI425775A/chicken/Vietnam/NCVD-1034/2011 (A/H5N1) segment 3 (PA)3685.20.000000e+002100/2152 (97%)EPI424956A/duck/Vietnam/NCVD-891/2010 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI424948A/duck/Vietnam/NCVD-890/2010 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI424908A/duck/Vietnam/NCVD-943/2011 (A/H5N1) segment 3 (PA)3685.20.000000e+002100/2152 (97%)EPI387934A/muscovy duck/Vietnam/LBM66/2011 (A/H5N1) segment 3 (PA)3685.20.000000e+002100/2152 (97%)EPI348891A/duck/Vietnam/NCVD-461/2010 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI348884A/duck/Vietnam/NCVD-460/2010 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI337127A/Guangdong/2/2006 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI280021A/Guangdong/2/2006 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI126697A/human/China/GD02/2006 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI113326A/Shenzhen/406H/2006 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI113026A/little egret/Hong Kong/718/2006 (A/H5N1) segment 3 (PA)3685.20.000000e+002099/2151 (97%)EPI427342A/chicken/Vietnam/NCVD-700/2011 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI425532A/duck/Vietnam/NCVD-815/2010 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI425236A/duck/Vietnam/NCVD-1171/2012 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI424996A/duck/Vietnam/NCVD-714/2011 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI424812A/duck/Vietnam/NCVD-712/2011 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI424382A/chicken/Vietnam/NCVD-685/2011 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI424374A/duck/Vietnam/NCVD-680/2011 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI387927A/muscovy duck/Vietnam/LBM57/2011 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI348877A/chicken/Vietnam/NCVD-459/2010 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI348856A/duck/Vietnam/NCVD-449/2010 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI348842A/duck/Vietnam/NCVD-432/2010 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI227015A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI170663A/chicken/Vietnam/209/2005 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI170641A/chicken/Vietnam/212/2005 (A/H5N1) segment 3 (PA)3679.60.000000e+002098/2151 (97%)EPI620871A/chicken/Vietnam/NCVD-675/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI557756A/chicken/Vietnam/NCVD-A675/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI539359A/Viet Nam/CM32/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI461826A/duck/Hunan/S4234/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI438915A/chicken/Vietnam/NCVD-675/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI427335A/chicken/Vietnam/NCVD-686/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI425815A/muscovy duck/Vietnam/NCVD-1049/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI425548A/duck/Vietnam/NCVD-850/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI425284A/duck/Vietnam/NCVD-674/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI424964A/chicken/Vietnam/NCVD-709/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002098/2152 (97%)EPI424828A/duck/Vietnam/NCVD-711/2011 (A/H5N1) segment 3 (PA)3674.10.000000e+002098/2152 (97%)EPI424366A/duck/Vietnam/NCVD-664/2010 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI225093A/duck/Nam Dinh/218/2006 (A/H5) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI224970A/chicken/Hong Kong/D-06-0947/2006 (A/H5N1) segment 3 (PA)3674.10.000000e+002098/2152 (97%)EPI170655A/duck/Vietnam/210/2005 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI170648A/Muscovy duck/Vietnam/211/2005 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI170634A/Muscovy duck/Vietnam/213/2005 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI170620A/chicken/Vietnam/216/2005 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI170612A/Muscovy duck/Vietnam/217/2005 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI170604A/duck/Vietnam/218/2005 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI170596A/duck/Vietnam/219/2005 (A/H5N1) segment 3 (PA)3674.10.000000e+002097/2151 (97%)EPI113028A/chicken/Hong Kong/947/2006 (A/H5N1) segment 3 (PA)3674.10.000000e+002098/2152 (97%)EPI448035A/crow/Bangladesh/1019/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002098/2153 (97%)EPI425444A/duck/Vietnam/NCVD-1219/2012 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI425340A/chicken/Vietnam/NCVD-753/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI425316A/duck/Vietnam/NCVD-1217/2012 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI425028A/duck/Vietnam/NCVD-754/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI424972A/chicken/Vietnam/NCVD-710/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002097/2152 (97%)EPI424932A/chicken/Vietnam/NCVD-752/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI424764A/duck/Vietnam/NCVD-851/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI424430A/chicken/Vietnam/NCVD-705/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002097/2152 (97%)EPI424422A/chicken/Vietnam/NCVD-704/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002097/2152 (97%)EPI424414A/chicken/Vietnam/NCVD-703/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002097/2152 (97%)EPI424406A/chicken/Vietnam/NCVD-702/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002097/2152 (97%)EPI387920A/muscovy duck/Vietnam/LBM14/2011 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI348863A/duck/Vietnam/NCVD-456/2010 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI348786A/duck/Vietnam/NCVD-458/2010 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI270187A/Vietnam/UT30850/2005 (A/H5N1) segment 3 (PA)3668.60.000000e+002094/2148 (97%)EPI170719A/chicken/Vietnam/202/2005 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI170679A/duck/Vietnam/207/2005 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI113074A/duck/Guangxi/5457/2005 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI113020A/magpie robin/Hong Kong/366/2006 (A/H5N1) segment 3 (PA)3668.60.000000e+002092/2145 (97%)EPI113018A/chicken/Hong Kong/282/2006 (A/H5N1) segment 3 (PA)3668.60.000000e+002096/2151 (97%)EPI448163A/crow/Bangladesh/316T/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002097/2153 (97%)EPI448147A/crow/Bangladesh/1056/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002097/2153 (97%)EPI448051A/crow/Bangladesh/1054/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002097/2153 (97%)EPI448043A/crow/Bangladesh/1020/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002097/2153 (97%)EPI438986A/duck/Vietnam/NCVD-935/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI438917A/duck/Vietnam/NCVD-931/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI425911A/duck/Vietnam/NCVD-1304/2012 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI425823A/chicken/Vietnam/NCVD-1059/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI425556A/duck/Vietnam/NCVD-645/2010 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI425524A/chicken/Vietnam/NCVD-802/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI425412A/duck/Vietnam/NCVD-1306/2012 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI424844A/duck/Vietnam/NCVD-1018/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI424820A/duck/Vietnam/NCVD-806/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI352356A/chicken/India/CL03485/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002097/2153 (97%)EPI352350A/chicken/India/CA0303/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002097/2153 (97%)EPI352336A/chicken/India/CA0301/2011 (A/H5N1) segment 3 (PA)3663.00.000000e+002097/2153 (97%)EPI170627A/duck/Vietnam/215/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI113120A/duck/Hunan/5152/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI113118A/duck/Hunan/5106/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI113068A/duck/Guangxi/5165/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI113064A/chicken/Guangxi/4989/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI113060A/goose/Guangxi/4513/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI113058A/duck/Guangxi/4428/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI113056A/goose/Guangxi/4289/2005 (A/H5N1) segment 3 (PA)3663.00.000000e+002095/2151 (97%)EPI448027A/crow/Bangladesh/1008/2011 (A/H5N1) segment 3 (PA)3657.50.000000e+002096/2153 (97%)EPI425332A/duck/Vietnam/NCVD-1221/2012 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI424780A/duck/Vietnam/NCVD-861/2011 (A/H5N1) segment 3 (PA)3657.50.000000e+002095/2152 (97%)EPI424772A/duck/Vietnam/NCVD-859/2011 (A/H5N1) segment 3 (PA)3657.50.000000e+002095/2152 (97%)EPI424398A/chicken/Vietnam/NCVD-699/2011 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI352330A/chicken/India/TR0383/2011 (A/H5N1) segment 3 (PA)3657.50.000000e+002096/2153 (97%)EPI352286A/duck/India/02AF1/2011 (A/H5N1) segment 3 (PA)3657.50.000000e+002096/2153 (97%)EPI246275A/duck/Korea/NSQ263/2008 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI246271A/chicken/Korea/ISQ250/2008 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI220340A/chicken/Primorje/1/2008 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI173066A/chicken/Primorsky/85/2008 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI170695A/duck/Vietnam/205/2005 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI170671A/duck/Vietnam/208/2005 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI164372A/goose/Yunnan/6193/2006 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI113096A/chicken/Guiyang/29/2006 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI113076A/duck/Guangxi/150/2006 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI113070A/duck/Guangxi/5270/2005 (A/H5N1) segment 3 (PA)3657.50.000000e+002094/2151 (97%)EPI557741A/duck/Vietnam/NCVD-KA250/2012 (A/H5N1) segment 3 (PA)3651.90.000000e+002093/2151 (97%)EPI531379A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 3 (PA)3651.90.000000e+002093/2151 (97%)EPI503724A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 3 (PA)3651.90.000000e+002093/2151 (97%)EPI448920A/crow/Bangladesh/1058/2011 (A/H5N1) segment 3 (PA)3651.90.000000e+002095/2153 (97%)EPI448885A/crow/Bangladesh/315T/2011 (A/H5N1) segment 3 (PA)3651.90.000000e+002095/2153 (97%)EPI448099A/duck/Bangladesh/1849/2011 (A/H5N1) segment 3 (PA)3651.90.000000e+002095/2153 (97%)

  16. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI645040A/swine/Guangdong/1/2014 (A/H5N6) segment 2 (PB1)4200.40.000000e+002274/2274 (100%)EPI645047A/swine/Guangdong/2/2014 (A/H5N6) segment 2 (PB1)4161.60.000000e+002267/2274 (99%)EPI550762A/duck/Laos/XBY004/2014 (A/H5N6) segment 2 (PB1)4139.50.000000e+002263/2274 (99%)EPI550751A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 2 (PB1)4139.50.000000e+002263/2274 (99%)EPI602497A/chicken/Dongguan/2690/2013 (A/H5N6) segment 2 (PB1)4133.90.000000e+002262/2274 (99%)EPI599365A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 2 (PB1)4128.40.000000e+002261/2274 (99%)EPI602490A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 2 (PB1)4122.80.000000e+002260/2274 (99%)EPI602476A/chicken/Shenzhen/715/2013 (A/H5N6) segment 2 (PB1)4122.80.000000e+002260/2274 (99%)EPI602418A/chicken/Dongguan/3363/2013 (A/H5N6) segment 2 (PB1)4122.80.000000e+002260/2274 (99%)EPI531454A/duck/Guangdong/GD01/2014 (A/H5N6) segment 2 (PB1)4117.30.000000e+002259/2274 (99%)EPI530052A/duck/Jiangxi/95/2014 (A/H5N6) segment 2 (PB1)4117.30.000000e+002259/2274 (99%)EPI593888A/Guangzhou/39715/2014 (A/H5N6) segment 2 (PB1)4100.70.000000e+002256/2274 (99%)EPI602483A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 2 (PB1)4084.10.000000e+002253/2274 (99%)EPI596620A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596614A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596608A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596602A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596596A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596590A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596584A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596578A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI596572A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 2 (PB1)4067.40.000000e+002248/2271 (98%)EPI590844A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 2 (PB1)4067.40.000000e+002250/2274 (98%)EPI590843A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 2 (PB1)4067.40.000000e+002250/2274 (98%)EPI424670A/duck/Vietnam/NCVD-1940/2012 (A/H5N1) segment 2 (PB1)4067.40.000000e+002250/2274 (98%)EPI590845A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 2 (PB1)4056.40.000000e+002249/2275 (98%)EPI375502A/Hong Kong/5923/2012 (A/H5N1) segment 2 (PB1)4050.80.000000e+002247/2274 (98%)EPI559061A/chicken/Vietnam/NCVD-KA423/2013 (A/H5N1) segment 2 (PB1)4039.70.000000e+002245/2274 (98%)EPI590805A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 2 (PB1)4037.90.000000e+002236/2261 (98%)EPI347308A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 2 (PB1)4036.00.000000e+002244/2274 (98%)EPI600475A/quail/Nanchang/6631/2013 (A/H5N1) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI585967A/chicken/DaLi/302/2014 (A/H5N1) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI585960A/chicken/AnNing/1/2014 (A/H5N1) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI585949A/chicken/TongHai/302/2014 (A/H5N1) segment 2 (PB1)4034.20.000000e+002244/2274 (98%)EPI600482A/duck/Nanchang/9789/2013 (A/H5N1) segment 2 (PB1)4017.60.000000e+002241/2274 (98%)EPI568707A/chicken/Zhejiang/6C2/2013 (A/H5N6) segment 2 (PB1)3973.30.000000e+002233/2274 (98%)EPI568708A/duck/Zhejiang/6D2/2013 (A/H5N6) segment 2 (PB1)3967.70.000000e+002232/2274 (98%)EPI602106A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 2 (PB1)3962.20.000000e+002231/2274 (98%)EPI601985A/black chicken/Jiangxi/10136/2014 (A/H0) segment 2 (PB1)3962.20.000000e+002231/2274 (98%)EPI601976A/black chicken/Jiangxi/10131/2014 (A/H0) segment 2 (PB1)3962.20.000000e+002231/2274 (98%)EPI599368A/environment/Jiangxi/10171/2014 (A/H5N6) segment 2 (PB1)3962.20.000000e+002231/2274 (98%)EPI599359A/environment/Jiangxi/10164/2014 (A/H5N6) segment 2 (PB1)3962.20.000000e+002231/2274 (98%)EPI590812A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 2 (PB1)3962.20.000000e+002232/2275 (98%)EPI602112A/environment/Jiangxi/10170/2014 (A/H5N6) segment 2 (PB1)3956.60.000000e+002230/2274 (98%)EPI599352A/duck/Jiangxi/10160/2014 (A/H5N6) segment 2 (PB1)3956.60.000000e+002230/2274 (98%)EPI559067A/duck/Vietnam/NCVD-A672/2011 (A/H5N1) segment 2 (PB1)3956.60.000000e+002230/2274 (98%)EPI599305A/chicken/Shenzhen/1845/2013 (A/H5N6) segment 2 (PB1)3951.10.000000e+002229/2274 (98%)EPI405134A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 2 (PB1)3951.10.000000e+002229/2274 (98%)EPI585730A/swan goose/Jilin/JL01/2014 (A/H5N6) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI425286A/duck/Vietnam/NCVD-674/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002227/2274 (97%)EPI425278A/duck/Vietnam/NCVD-673/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI424894A/chicken/Vietnam/NCVD-921/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI424886A/duck/Vietnam/NCVD-920/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI336988A/duck/Zhejiang/2248/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI336986A/duck/Zhejiang/2244/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI336985A/duck/Zhejiang/2243/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI336984A/duck/Zhejiang/2242/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI336983A/duck/Zhejiang/224/2011 (A/H5N1) segment 2 (PB1)3945.60.000000e+002228/2274 (97%)EPI602180A/duck/Jiangxi/13484/2014 (A/H5N6) segment 2 (PB1)3940.00.000000e+002227/2274 (97%)EPI602173A/duck/Jiangxi/13475/2014 (A/H5N6) segment 2 (PB1)3940.00.000000e+002227/2274 (97%)EPI602166A/duck/Jiangxi/13469/2014 (A/H5N6) segment 2 (PB1)3940.00.000000e+002227/2274 (97%)EPI590841A/duck/Sichuan/NCXJ24/2014 (A/H5N6) segment 2 (PB1)3934.50.000000e+002226/2274 (97%)EPI590840A/duck/Sichuan/NCXJ16/2014 (A/H5N6) segment 2 (PB1)3934.50.000000e+002226/2274 (97%)EPI590836A/Anas_crecca/Hubei/Chenhu1623-5/2014 (A/H5N6) segment 2 (PB1)3934.50.000000e+002226/2274 (97%)EPI585723A/cat/Sichuan/SC18/2014 (A/H5N6) segment 2 (PB1)3934.50.000000e+002226/2274 (97%)EPI533586A/Sichuan/26221/2014 (A/H5N6) segment 2 (PB1)3934.50.000000e+002226/2274 (97%)EPI492510A/barn swallow/Hong Kong/1161/2010 (A/H5N1) segment 2 (PB1)3934.50.000000e+002226/2274 (97%)EPI425486A/duck/Vietnam/NCVD-927/2011 (A/H5N1) segment 2 (PB1)3934.50.000000e+002226/2274 (97%)EPI590842A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 2 (PB1)3928.90.000000e+002225/2274 (97%)EPI424942A/duck/Vietnam/NCVD-885/2010 (A/H5N1) segment 2 (PB1)3928.90.000000e+002225/2274 (97%)EPI590839A/duck/Sichuan/NCXJ15/2014 (A/H5N6) segment 2 (PB1)3923.40.000000e+002224/2274 (97%)EPI336982A/duck/Zhejiang/213/2011 (A/H5N1) segment 2 (PB1)3923.40.000000e+002224/2274 (97%)EPI590838A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 2 (PB1)3917.90.000000e+002223/2274 (97%)EPI590837A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 2 (PB1)3917.90.000000e+002223/2274 (97%)EPI645744A/duck/Vietnam/HU1-1511/2014 (A/H5N6) segment 2 (PB1)3912.30.000000e+002222/2274 (97%)EPI589371A/muscovy duck/Quang Ninh/5c112/2013 (A/H5N6) segment 2 (PB1)3912.30.000000e+002222/2274 (97%)EPI425598A/duck/Vietnam/NCVD-1463/2012 (A/H5N1) segment 2 (PB1)3912.30.000000e+002222/2274 (97%)EPI425198A/duck/Vietnam/NCVD129-7/2011 (A/H5N1) segment 2 (PB1)3912.30.000000e+002222/2274 (97%)EPI610342A/chicken/Fujian/FZ02/2011 (A/H9N2) segment 2 (PB1)3904.90.000000e+002217/2273 (97%)EPI645743A/duck/Vietnam/HU1-1507/2014 (A/H5N6) segment 2 (PB1)3901.20.000000e+002220/2274 (97%)EPI589365A/muscovy duck/Quang Ninh/4c111/2013 (A/H5N6) segment 2 (PB1)3901.20.000000e+002220/2274 (97%)EPI559055A/duck/Vietnam/NCVD-KA261/2012 (A/H5N1) segment 2 (PB1)3901.20.000000e+002220/2274 (97%)EPI589839A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 2 (PB1)3895.70.000000e+002219/2274 (97%)EPI475615A/wild duck/Fujian/2/2011 (A/H5N1) segment 2 (PB1)3895.70.000000e+002221/2276 (97%)EPI438913A/duck/Vietnam/NCVD-1026/2011 (A/H5N1) segment 2 (PB1)3895.70.000000e+002219/2274 (97%)EPI424862A/duck/Vietnam/NCVD-1025/2011 (A/H5N1) segment 2 (PB1)3895.70.000000e+002219/2274 (97%)EPI348921A/duck/Vietnam/NCVD-431/2010 (A/H5N1) segment 2 (PB1)3895.70.000000e+002221/2276 (97%)EPI559053A/duck/Vietnam/NCVD-KA250/2012 (A/H5N1) segment 2 (PB1)3890.20.000000e+002218/2274 (97%)EPI530060A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 2 (PB1)3890.20.000000e+002221/2277 (97%)EPI515011A/duck/Hunan/749/2011 (A/H0) segment 2 (PB1)3890.20.000000e+002218/2274 (97%)EPI475601A/wild duck/Fujian/1/2011 (A/H5N1) segment 2 (PB1)3890.20.000000e+002219/2275 (97%)EPI559057A/duck/Vietnam/NCVD-KA309/2012 (A/H5N1) segment 2 (PB1)3884.60.000000e+002217/2274 (97%)EPI515001A/duck/Hunan/747/2011 (A/H0) segment 2 (PB1)3884.60.000000e+002217/2274 (97%)EPI425905A/chicken/Vietnam/NCVD-1254/2011 (A/H5N1) segment 2 (PB1)3884.60.000000e+002217/2274 (97%)EPI425102A/duck/Vietnam/NCVD-1497/2012 (A/H5N1) segment 2 (PB1)3884.60.000000e+002217/2274 (97%)EPI351367A/duck/Vietnam/NCVD-423/2010 (A/H5N1) segment 2 (PB1)3884.60.000000e+002219/2276 (97%)EPI620913A/chicken/Vietnam/NCVD-421/2010 (A/H5N1) segment 2 (PB1)3879.10.000000e+002218/2276 (97%)EPI559049A/duck/Vietnam/NCVD-KA25/2011 (A/H5N1) segment 2 (PB1)3879.10.000000e+002216/2274 (97%)EPI425873A/duck/Vietnam/NCVD-1163/2011 (A/H5N1) segment 2 (PB1)3879.10.000000e+002216/2274 (97%)EPI425865A/duck/Vietnam/NCVD-1162/2011 (A/H5N1) segment 2 (PB1)3879.10.000000e+002216/2274 (97%)EPI425857A/duck/Vietnam/NCVD-1161/2011 (A/H5N1) segment 2 (PB1)3879.10.000000e+002216/2274 (97%)EPI425230A/duck/Vietnam/NCVD-1160/2011 (A/H5N1) segment 2 (PB1)3879.10.000000e+002216/2274 (97%)EPI350490A/chicken/Vietnam/NCVD-421/2010 (A/H5N1) segment 2 (PB1)3879.10.000000e+002218/2276 (97%)EPI424392A/duck/Vietnam/NCVD-1283/2012 (A/H5N1) segment 2 (PB1)3873.50.000000e+002215/2274 (97%)EPI461761A/duck/Hunan/S4234/2011 (A/H5N1) segment 2 (PB1)3871.70.000000e+002214/2274 (97%)EPI350443A/chicken/Vietnam/NCVD-399/2010 (A/H5N1) segment 2 (PB1)3869.90.000000e+002216/2276 (97%)EPI622527A/chicken/Vietnam/NCVD-398/2010 (A/H5N1) segment 2 (PB1)3868.00.000000e+002216/2276 (97%)EPI531371A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 2 (PB1)3868.00.000000e+002216/2276 (97%)EPI425929A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 2 (PB1)3868.00.000000e+002214/2274 (97%)EPI425678A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 2 (PB1)3868.00.000000e+002214/2274 (97%)EPI425142A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 2 (PB1)3868.00.000000e+002214/2274 (97%)EPI424734A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 2 (PB1)3868.00.000000e+002214/2274 (97%)EPI350156A/chicken/Vietnam/NCVD-390/2009 (A/H5N1) segment 2 (PB1)3868.00.000000e+002216/2276 (97%)EPI350436A/chicken/Vietnam/NCVD-398/2010 (A/H5N1) segment 2 (PB1)3864.30.000000e+002215/2276 (97%)EPI348844A/duck/Vietnam/NCVD-432/2010 (A/H5N1) segment 2 (PB1)3864.30.000000e+002215/2276 (97%)EPI503721A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002215/2276 (97%)EPI461027A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002213/2274 (97%)EPI425310A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002213/2274 (97%)EPI425110A/duck/Vietnam/NCVD-1943/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002213/2274 (97%)EPI424982A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002214/2275 (97%)EPI424974A/chicken/Vietnam/NCVD-710/2011 (A/H5N1) segment 2 (PB1)3862.50.000000e+002215/2276 (97%)EPI424830A/duck/Vietnam/NCVD-711/2011 (A/H5N1) segment 2 (PB1)3862.50.000000e+002215/2276 (97%)EPI424186A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002214/2275 (97%)EPI424178A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002214/2275 (97%)EPI424170A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 2 (PB1)3862.50.000000e+002214/2275 (97%)EPI350149A/chicken/Vietnam/NCVD-389/2009 (A/H5N1) segment 2 (PB1)3862.50.000000e+002215/2276 (97%)EPI348858A/duck/Vietnam/NCVD-449/2010 (A/H5N1) segment 2 (PB1)3862.50.000000e+002215/2276 (97%)EPI567035A/muscovy duck/Quang Ninh/48c1-4-1/2013 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI559204A/duck/Vietnam/NCVD-KA415/2012 (A/H5N2) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI559059A/duck/Vietnam/NCVD-KA311/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI559056A/duck/Vietnam/NCVD-KA262/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI461486A/duck/Quanh Ninh/53/2013 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI460930A/muscovy duck/Quanh Ninh/49/2013 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI425921A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI425825A/chicken/Vietnam/NCVD-1059/2011 (A/H5N1) segment 2 (PB1)3856.90.000000e+002214/2276 (97%)EPI425769A/duck/Vietnam/NCVD-671/2011 (A/H5N1) segment 2 (PB1)3856.90.000000e+002215/2277 (97%)EPI425686A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI425638A/duck/Vietnam/NCVD-1931/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI425630A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002213/2275 (97%)EPI425622A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI425534A/duck/Vietnam/NCVD-815/2010 (A/H5N1) segment 2 (PB1)3856.90.000000e+002214/2276 (97%)EPI425182A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI425174A/chicken/Vietnam/NCVD-1942/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI425006A/chicken/Vietnam/NCVD-1437/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI424990A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI424966A/chicken/Vietnam/NCVD-709/2011 (A/H5N1) segment 2 (PB1)3856.90.000000e+002214/2276 (97%)EPI424726A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI424702A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002212/2274 (97%)EPI424194A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 2 (PB1)3856.90.000000e+002213/2275 (97%)EPI559050A/duck/Vietnam/NCVD-KA30/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002214/2277 (97%)EPI461534A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 2 (PB1)3851.40.000000e+002211/2274 (97%)EPI425526A/chicken/Vietnam/NCVD-802/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI425494A/duck/Vietnam/NCVD-931/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002212/2275 (97%)EPI425302A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002211/2274 (97%)EPI425158A/duck/Vietnam/NCVD-1937/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002211/2274 (97%)EPI425126A/duck/Vietnam/NCVD-1872/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002211/2274 (97%)EPI425022A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002211/2274 (97%)EPI425014A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002211/2274 (97%)EPI424958A/duck/Vietnam/NCVD-891/2010 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI424950A/duck/Vietnam/NCVD-890/2010 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI424926A/duck/Vietnam/NCVD-947/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI424846A/duck/Vietnam/NCVD-1018/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI424742A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002211/2274 (97%)EPI424686A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 2 (PB1)3851.40.000000e+002212/2275 (97%)EPI424432A/chicken/Vietnam/NCVD-705/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI424424A/chicken/Vietnam/NCVD-704/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI424416A/chicken/Vietnam/NCVD-703/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI424408A/chicken/Vietnam/NCVD-702/2011 (A/H5N1) segment 2 (PB1)3851.40.000000e+002213/2276 (97%)EPI168054A/magpie robin/Hong Kong/1897/2008 (A/H5N1) segment 2 (PB1)3851.40.000000e+002212/2275 (97%)EPI168038A/grey heron/Hong Kong/1046/2008 (A/H5N1) segment 2 (PB1)3851.40.000000e+002212/2275 (97%)EPI459245A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 2 (PB1)3845.80.000000e+002211/2275 (97%)EPI459237A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 2 (PB1)3845.80.000000e+002211/2275 (97%)EPI425937A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002210/2274 (97%)EPI425881A/duck/Vietnam/NCVD-1182/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002211/2275 (97%)EPI425817A/muscovy duck/Vietnam/NCVD-1049/2011 (A/H5N1) segment 2 (PB1)3845.80.000000e+002213/2277 (97%)EPI425670A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002211/2275 (97%)EPI425646A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002211/2275 (97%)EPI425550A/duck/Vietnam/NCVD-850/2011 (A/H5N1) segment 2 (PB1)3845.80.000000e+002212/2276 (97%)EPI425438A/duck/Vietnam/NCVD-1210/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002212/2276 (97%)EPI425270A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002210/2274 (97%)EPI425150A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002210/2274 (97%)EPI425134A/duck/Vietnam/NCVD-1899/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002210/2274 (97%)EPI424854A/duck/Vietnam/NCVD-1022/2011 (A/H5N1) segment 2 (PB1)3845.80.000000e+002212/2276 (97%)EPI424718A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002210/2274 (97%)EPI424710A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 2 (PB1)3845.80.000000e+002210/2274 (97%)EPI424694A/duck/Vietnam/NCVD-948/2011 (A/H5N1) segment 2 (PB1)3845.80.000000e+002212/2276 (97%)EPI424400A/chicken/Vietnam/NCVD-699/2011 (A/H5N1) segment 2 (PB1)3845.80.000000e+002212/2276 (97%)EPI348865A/duck/Vietnam/NCVD-456/2010 (A/H5N1) segment 2 (PB1)3845.80.000000e+002212/2276 (97%)EPI337229A/Hubei/1/2010 (A/H5N1) segment 2 (PB1)3842.20.000000e+002211/2276 (97%)EPI267030A/Hubei/1/2010 (A/H5N1) segment 2 (PB1)3842.20.000000e+002211/2276 (97%)EPI589833A/duck/Quang Ninh/15c111/2013 (A/H5N1) segment 2 (PB1)3840.30.000000e+002210/2275 (97%)EPI438148A/muscovy duck/Vietnam/LBM295/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002209/2274 (97%)EPI427348A/chicken/Vietnam/NCVD-668/2010 (A/H5N1) segment 2 (PB1)3840.30.000000e+002212/2277 (97%)EPI425945A/chicken/Vietnam/NCVD-715/2011 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI425913A/duck/Vietnam/NCVD-1304/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI425889A/duck/Vietnam/NCVD-1212/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI425654A/duck/Vietnam/NCVD-1968/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002209/2274 (97%)EPI425470A/chicken/Vietnam/NCVD-1247/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI425406A/duck/Vietnam/NCVD-1269/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002210/2275 (97%)EPI425382A/chicken/Vietnam/NCVD-1248/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI425342A/chicken/Vietnam/NCVD-753/2011 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI425294A/duck/Vietnam/NCVD-669/2011 (A/H5N1) segment 2 (PB1)3840.30.000000e+002212/2277 (97%)EPI425222A/duck/Vietnam/NCVD1-48/2011 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI424934A/chicken/Vietnam/NCVD-752/2011 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI424838A/duck/Vietnam/NCVD-952/2011 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI424822A/duck/Vietnam/NCVD-806/2011 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI389928A/duck/Vietnam/LBM136/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002210/2275 (97%)EPI389920A/duck/Vietnam/LBM133/2012 (A/H5N1) segment 2 (PB1)3840.30.000000e+002210/2275 (97%)EPI348879A/chicken/Vietnam/NCVD-459/2010 (A/H5N1) segment 2 (PB1)3840.30.000000e+002211/2276 (97%)EPI168046A/magpie robin/Hong Kong/1097/2008 (A/H5N1) segment 2 (PB1)3840.30.000000e+002210/2275 (97%)EPI620923A/chicken/Vietnam/NCVD-675/2011 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI559068A/chicken/Vietnam/NCVD-A675/2011 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI427334A/chicken/Vietnam/NCVD-686/2011 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI425558A/duck/Vietnam/NCVD-645/2010 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI425446A/duck/Vietnam/NCVD-1219/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI425430A/duck/Vietnam/NCVD-1207/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI425414A/duck/Vietnam/NCVD-1306/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI425326A/muscovy duck/Vietnam/NCVD-1220/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI425030A/duck/Vietnam/NCVD-754/2011 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI424902A/duck/Vietnam/NCVD-935/2011 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI424766A/duck/Vietnam/NCVD-851/2011 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI424662A/chicken/Vietnam/NCVD-1255/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002209/2275 (97%)EPI424384A/chicken/Vietnam/NCVD-685/2011 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI424360A/duck/Vietnam/NCVD-1206/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI389944A/duck/Vietnam/LBM140/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002209/2275 (97%)EPI389912A/duck/Vietnam/LBM132/2012 (A/H5N1) segment 2 (PB1)3834.80.000000e+002209/2275 (97%)EPI348893A/duck/Vietnam/NCVD-461/2010 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI348886A/duck/Vietnam/NCVD-460/2010 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI348788A/duck/Vietnam/NCVD-458/2010 (A/H5N1) segment 2 (PB1)3834.80.000000e+002210/2276 (97%)EPI168006A/grey heron/Hong Kong/3088/2007 (A/H5N1) segment 2 (PB1)3834.80.000000e+002209/2275 (97%)EPI589827A/muscovy duck/Quang Ninh/7c121/2013 (A/H5N1) segment 2 (PB1)3829.20.000000e+002208/2275 (97%)EPI559062A/chicken/Vietnam/NCVD-KA432/2013 (A/H5N1) segment 2 (PB1)3829.20.000000e+002207/2274 (97%)EPI559054A/duck/Vietnam/NCVD-KA260/2012 (A/H5N1) segment 2 (PB1)3829.20.000000e+002208/2275 (97%)EPI539358A/Viet Nam/CM32/2011 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI427327A/chicken/Vietnam/NCVD-675/2011 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI425897A/duck/Vietnam/NCVD-1251/2011 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI425614A/chicken/Vietnam/NCVD-1488/2012 (A/H5N1) segment 2 (PB1)3829.20.000000e+002208/2275 (97%)EPI425398A/muscovy duck/Vietnam/NCVD-1256/2012 (A/H5N1) segment 2 (PB1)3829.20.000000e+002208/2275 (97%)EPI425390A/duck/Vietnam/NCVD-1253/2012 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI425350A/chicken/Vietnam/NCVD-1223/2012 (A/H5N1) segment 2 (PB1)3829.20.000000e+002208/2275 (97%)EPI425062A/duck/Vietnam/NCVD-1252/2011 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI424910A/duck/Vietnam/NCVD-943/2011 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI424782A/duck/Vietnam/NCVD-861/2011 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI424774A/duck/Vietnam/NCVD-859/2011 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI348872A/duck/Vietnam/NCVD-457/2010 (A/H5N1) segment 2 (PB1)3829.20.000000e+002209/2276 (97%)EPI567068A/muscovy duck/Vietnam/LBM670/2014 (A/H5N1) segment 2 (PB1)3823.70.000000e+002206/2274 (97%)EPI567048A/muscovy duck/Vietnam/LBM669/2014 (A/H5N1) segment 2 (PB1)3823.70.000000e+002206/2274 (97%)EPI567042A/muscovy duck/Vietnam/LBM668/2014 (A/H5N1) segment 2 (PB1)3823.70.000000e+002206/2274 (97%)EPI559063A/chicken/Vietnam/NCVD-KA435/2013 (A/H5N1) segment 2 (PB1)3823.70.000000e+002206/2274 (97%)EPI553216A/Chicken/Shandong/J01/2009 (A/H5N1) segment 2 (PB1)3823.70.000000e+002208/2276 (97%)

  17. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI645041A/swine/Guangdong/1/2014 (A/H5N6) segment 1 (PB2)4211.50.000000e+002280/2280 (100%)EPI645048A/swine/Guangdong/2/2014 (A/H5N6) segment 1 (PB2)4194.90.000000e+002277/2280 (99%)EPI602417A/chicken/Dongguan/3363/2013 (A/H5N6) segment 1 (PB2)4161.60.000000e+002271/2280 (99%)EPI599332A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 1 (PB2)4161.60.000000e+002271/2280 (99%)EPI531453A/duck/Guangdong/GD01/2014 (A/H5N6) segment 1 (PB2)4161.60.000000e+002271/2280 (99%)EPI599297A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 1 (PB2)4156.10.000000e+002270/2280 (99%)EPI602489A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 1 (PB2)4139.50.000000e+002267/2280 (99%)EPI530059A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 1 (PB2)4133.90.000000e+002266/2280 (99%)EPI599337A/duck/Dongguan/3069/2013 (A/H5N6) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI599290A/chicken/Shenzhen/552/2013 (A/H5N6) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI550750A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 1 (PB2)4128.40.000000e+002265/2280 (99%)EPI602496A/chicken/Dongguan/2690/2013 (A/H5N6) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI599344A/chicken/Dongguan/4259/2013 (A/H5N6) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI550761A/duck/Laos/XBY004/2014 (A/H5N6) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI530051A/duck/Jiangxi/95/2014 (A/H5N6) segment 1 (PB2)4122.80.000000e+002264/2280 (99%)EPI599325A/duck/Dongguan/2685/2013 (A/H5N6) segment 1 (PB2)4117.30.000000e+002263/2280 (99%)EPI599318A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 1 (PB2)4111.80.000000e+002262/2280 (99%)EPI590811A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 1 (PB2)4111.80.000000e+002262/2280 (99%)EPI602475A/chicken/Shenzhen/715/2013 (A/H5N6) segment 1 (PB2)4106.20.000000e+002262/2281 (99%)EPI599311A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 1 (PB2)4106.20.000000e+002261/2280 (99%)EPI599283A/chicken/Shenzhen/433/2013 (A/H5N6) segment 1 (PB2)4106.20.000000e+002262/2281 (99%)EPI602482A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 1 (PB2)4100.70.000000e+002260/2280 (99%)EPI590854A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 1 (PB2)4100.70.000000e+002260/2280 (99%)EPI615111A/duck/Guangxi/175D12/2014 (A/H3N6) segment 1 (PB2)4089.60.000000e+002258/2280 (99%)EPI599646A/goose/Shantou/1763/2014 (A/H5N6) segment 1 (PB2)4089.60.000000e+002258/2280 (99%)EPI599653A/goose/Shantou/1791/2014 (A/H5N6) segment 1 (PB2)4084.10.000000e+002257/2280 (98%)EPI590853A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 1 (PB2)4084.10.000000e+002257/2280 (98%)EPI599660A/goose/Shantou/1806/2014 (A/H5N6) segment 1 (PB2)4078.50.000000e+002256/2280 (98%)EPI590855A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 1 (PB2)4078.50.000000e+002256/2280 (98%)EPI559040A/chicken/Vietnam/NCVD-KA423/2013 (A/H5N1) segment 1 (PB2)4061.90.000000e+002253/2280 (98%)EPI424669A/duck/Vietnam/NCVD-1940/2012 (A/H5N1) segment 1 (PB2)4056.40.000000e+002252/2280 (98%)EPI593887A/Guangzhou/39715/2014 (A/H5N6) segment 1 (PB2)4050.80.000000e+002251/2280 (98%)EPI590804A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 1 (PB2)4050.80.000000e+002251/2280 (98%)EPI585966A/chicken/DaLi/302/2014 (A/H5N1) segment 1 (PB2)4050.80.000000e+002250/2278 (98%)EPI585948A/chicken/TongHai/302/2014 (A/H5N1) segment 1 (PB2)4030.50.000000e+002245/2276 (98%)EPI585959A/chicken/AnNing/1/2014 (A/H5N1) segment 1 (PB2)4023.10.000000e+002245/2278 (98%)EPI461753A/duck/Hunan/S4220/2011 (A/H5N1) segment 1 (PB2)3995.40.000000e+002241/2280 (98%)EPI347459A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 1 (PB2)3986.20.000000e+002224/2257 (98%)EPI600474A/quail/Nanchang/6631/2013 (A/H5N1) segment 1 (PB2)3967.70.000000e+002236/2280 (98%)EPI600481A/duck/Nanchang/9789/2013 (A/H5N1) segment 1 (PB2)3956.60.000000e+002234/2280 (97%)EPI459254A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 1 (PB2)3945.60.000000e+002232/2280 (97%)EPI590852A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 1 (PB2)3940.00.000000e+002232/2281 (97%)EPI567034A/muscovy duck/Quang Ninh/48c1-4-1/2013 (A/H5N1) segment 1 (PB2)3940.00.000000e+002231/2280 (97%)EPI461485A/duck/Quanh Ninh/53/2013 (A/H5N1) segment 1 (PB2)3940.00.000000e+002231/2280 (97%)EPI460929A/muscovy duck/Quanh Ninh/49/2013 (A/H5N1) segment 1 (PB2)3940.00.000000e+002231/2280 (97%)EPI590851A/duck/Sichuan/NCXJ24/2014 (A/H5N6) segment 1 (PB2)3934.50.000000e+002231/2281 (97%)EPI590850A/duck/Sichuan/NCXJ16/2014 (A/H5N6) segment 1 (PB2)3934.50.000000e+002231/2281 (97%)EPI590848A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 1 (PB2)3934.50.000000e+002231/2281 (97%)EPI590847A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 1 (PB2)3934.50.000000e+002231/2281 (97%)EPI568706A/chicken/Zhejiang/6C2/2013 (A/H5N6) segment 1 (PB2)3934.50.000000e+002231/2281 (97%)EPI568705A/duck/Zhejiang/6D2/2013 (A/H5N6) segment 1 (PB2)3934.50.000000e+002231/2281 (97%)EPI590849A/duck/Sichuan/NCXJ15/2014 (A/H5N6) segment 1 (PB2)3928.90.000000e+002230/2281 (97%)EPI585729A/swan goose/Jilin/JL01/2014 (A/H5N6) segment 1 (PB2)3923.40.000000e+002229/2281 (97%)EPI533585A/Sichuan/26221/2014 (A/H5N6) segment 1 (PB2)3923.40.000000e+002229/2281 (97%)EPI602105A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI601975A/black chicken/Jiangxi/10131/2014 (A/H0) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI599364A/environment/Jiangxi/10171/2014 (A/H5N6) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI599358A/environment/Jiangxi/10164/2014 (A/H5N6) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI599351A/duck/Jiangxi/10160/2014 (A/H5N6) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI599304A/chicken/Shenzhen/1845/2013 (A/H5N6) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI585722A/cat/Sichuan/SC18/2014 (A/H5N6) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI559046A/duck/Vietnam/NCVD-A672/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI559028A/duck/Vietnam/NCVD-KA25/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI492509A/barn swallow/Hong Kong/1161/2010 (A/H5N1) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI475607A/wild duck/Fujian/2/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI425872A/duck/Vietnam/NCVD-1163/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI425864A/duck/Vietnam/NCVD-1162/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI425856A/duck/Vietnam/NCVD-1161/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI425285A/duck/Vietnam/NCVD-674/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI425277A/duck/Vietnam/NCVD-673/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI425229A/duck/Vietnam/NCVD-1160/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI405133A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002228/2281 (97%)EPI387918A/muscovy duck/Vietnam/LBM66/2011 (A/H5N1) segment 1 (PB2)3917.90.000000e+002227/2280 (97%)EPI602111A/environment/Jiangxi/10170/2014 (A/H5N6) segment 1 (PB2)3912.30.000000e+002227/2281 (97%)EPI590846A/Anas_crecca/Hubei/Chenhu1623-5/2014 (A/H5N6) segment 1 (PB2)3912.30.000000e+002227/2281 (97%)EPI475600A/wild duck/Fujian/1/2011 (A/H5N1) segment 1 (PB2)3912.30.000000e+002226/2280 (97%)EPI424941A/duck/Vietnam/NCVD-885/2010 (A/H5N1) segment 1 (PB2)3912.30.000000e+002226/2280 (97%)EPI425597A/duck/Vietnam/NCVD-1463/2012 (A/H5N1) segment 1 (PB2)3906.80.000000e+002225/2280 (97%)EPI425197A/duck/Vietnam/NCVD129-7/2011 (A/H5N1) segment 1 (PB2)3906.80.000000e+002225/2280 (97%)EPI424885A/duck/Vietnam/NCVD-920/2011 (A/H5N1) segment 1 (PB2)3906.80.000000e+002226/2281 (97%)EPI424391A/duck/Vietnam/NCVD-1283/2012 (A/H5N1) segment 1 (PB2)3906.80.000000e+002225/2280 (97%)EPI567067A/muscovy duck/Vietnam/LBM670/2014 (A/H5N1) segment 1 (PB2)3904.90.000000e+002224/2279 (97%)EPI567041A/muscovy duck/Vietnam/LBM668/2014 (A/H5N1) segment 1 (PB2)3904.90.000000e+002224/2279 (97%)EPI610343A/chicken/Fujian/FZ02/2011 (A/H9N2) segment 1 (PB2)3901.20.000000e+002222/2277 (97%)EPI425904A/chicken/Vietnam/NCVD-1254/2011 (A/H5N1) segment 1 (PB2)3901.20.000000e+002224/2280 (97%)EPI425485A/duck/Vietnam/NCVD-927/2011 (A/H5N1) segment 1 (PB2)3901.20.000000e+002225/2281 (97%)EPI424893A/chicken/Vietnam/NCVD-921/2011 (A/H5N1) segment 1 (PB2)3901.20.000000e+002225/2281 (97%)EPI424869A/duck/Vietnam/NCVD-1026/2011 (A/H5N1) segment 1 (PB2)3901.20.000000e+002224/2280 (97%)EPI424861A/duck/Vietnam/NCVD-1025/2011 (A/H5N1) segment 1 (PB2)3901.20.000000e+002224/2280 (97%)EPI601982A/black chicken/Jiangxi/10136/2014 (A/H0) segment 1 (PB2)3893.90.000000e+002223/2280 (97%)EPI567033A/muscovy duck/Vietnam/LBM669/2014 (A/H5N1) segment 1 (PB2)3893.90.000000e+002222/2279 (97%)EPI602172A/duck/Jiangxi/13475/2014 (A/H5N6) segment 1 (PB2)3890.20.000000e+002223/2281 (97%)EPI589364A/muscovy duck/Quang Ninh/4c111/2013 (A/H5N6) segment 1 (PB2)3890.20.000000e+002222/2280 (97%)EPI425005A/chicken/Vietnam/NCVD-1437/2012 (A/H5N1) segment 1 (PB2)3890.20.000000e+002222/2280 (97%)EPI602179A/duck/Jiangxi/13484/2014 (A/H5N6) segment 1 (PB2)3884.60.000000e+002222/2281 (97%)EPI602165A/duck/Jiangxi/13469/2014 (A/H5N6) segment 1 (PB2)3884.60.000000e+002222/2281 (97%)EPI589349A/muscovy duck/Quang Ninh/5c112/2013 (A/H5N6) segment 1 (PB2)3884.60.000000e+002221/2280 (97%)EPI589838A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 1 (PB2)3879.10.000000e+002220/2280 (97%)EPI336981A/duck/Zhejiang/2248/2011 (A/H5N1) segment 1 (PB2)3868.00.000000e+002212/2271 (97%)EPI336979A/duck/Zhejiang/2244/2011 (A/H5N1) segment 1 (PB2)3868.00.000000e+002212/2271 (97%)EPI336978A/duck/Zhejiang/2243/2011 (A/H5N1) segment 1 (PB2)3868.00.000000e+002212/2271 (97%)EPI336977A/duck/Zhejiang/2242/2011 (A/H5N1) segment 1 (PB2)3868.00.000000e+002212/2271 (97%)EPI336976A/duck/Zhejiang/224/2011 (A/H5N1) segment 1 (PB2)3868.00.000000e+002212/2271 (97%)EPI375501A/Hong Kong/5923/2012 (A/H5N1) segment 1 (PB2)3856.90.000000e+002217/2281 (97%)EPI620950A/chicken/Vietnam/NCVD-421/2010 (A/H5N1) segment 1 (PB2)3829.20.000000e+002211/2280 (96%)EPI425912A/duck/Vietnam/NCVD-1304/2012 (A/H5N1) segment 1 (PB2)3829.20.000000e+002211/2280 (96%)EPI350489A/chicken/Vietnam/NCVD-421/2010 (A/H5N1) segment 1 (PB2)3829.20.000000e+002211/2280 (96%)EPI425445A/duck/Vietnam/NCVD-1219/2012 (A/H5N1) segment 1 (PB2)3823.70.000000e+002210/2280 (96%)EPI425413A/duck/Vietnam/NCVD-1306/2012 (A/H5N1) segment 1 (PB2)3823.70.000000e+002210/2280 (96%)EPI425237A/duck/Vietnam/NCVD-1171/2012 (A/H5N1) segment 1 (PB2)3823.70.000000e+002211/2281 (96%)EPI424359A/duck/Vietnam/NCVD-1206/2012 (A/H5N1) segment 1 (PB2)3823.70.000000e+002210/2280 (96%)EPI401607A/duck/Guangxi/GXd-5/2010 (A/H6N1) segment 1 (PB2)3823.70.000000e+002210/2280 (96%)EPI387917A/muscovy duck/Vietnam/LBM57/2011 (A/H5N1) segment 1 (PB2)3823.70.000000e+002210/2280 (96%)EPI337228A/Hubei/1/2010 (A/H5N1) segment 1 (PB2)3823.70.000000e+002210/2280 (96%)EPI267029A/Hubei/1/2010 (A/H5N1) segment 1 (PB2)3823.70.000000e+002210/2280 (96%)EPI539357A/Viet Nam/CM32/2011 (A/H5N1) segment 1 (PB2)3818.10.000000e+002209/2280 (96%)EPI425429A/duck/Vietnam/NCVD-1207/2012 (A/H5N1) segment 1 (PB2)3818.10.000000e+002209/2280 (96%)EPI424957A/duck/Vietnam/NCVD-891/2010 (A/H5N1) segment 1 (PB2)3818.10.000000e+002210/2281 (96%)EPI351366A/duck/Vietnam/NCVD-423/2010 (A/H5N1) segment 1 (PB2)3818.10.000000e+002209/2280 (96%)EPI425944A/chicken/Vietnam/NCVD-715/2011 (A/H5N1) segment 1 (PB2)3812.60.000000e+002208/2280 (96%)EPI425525A/chicken/Vietnam/NCVD-802/2011 (A/H5N1) segment 1 (PB2)3812.60.000000e+002208/2280 (96%)EPI424949A/duck/Vietnam/NCVD-890/2010 (A/H5N1) segment 1 (PB2)3812.60.000000e+002209/2281 (96%)EPI424821A/duck/Vietnam/NCVD-806/2011 (A/H5N1) segment 1 (PB2)3812.60.000000e+002208/2280 (96%)EPI424375A/duck/Vietnam/NCVD-680/2011 (A/H5N1) segment 1 (PB2)3812.60.000000e+002208/2280 (96%)EPI424367A/duck/Vietnam/NCVD-664/2010 (A/H5N1) segment 1 (PB2)3812.60.000000e+002208/2280 (96%)EPI425557A/duck/Vietnam/NCVD-645/2010 (A/H5N1) segment 1 (PB2)3807.10.000000e+002208/2281 (96%)EPI424973A/chicken/Vietnam/NCVD-710/2011 (A/H5N1) segment 1 (PB2)3807.10.000000e+002207/2280 (96%)EPI424965A/chicken/Vietnam/NCVD-709/2011 (A/H5N1) segment 1 (PB2)3807.10.000000e+002207/2280 (96%)EPI348871A/duck/Vietnam/NCVD-457/2010 (A/H5N1) segment 1 (PB2)3807.10.000000e+002208/2281 (96%)EPI348864A/duck/Vietnam/NCVD-456/2010 (A/H5N1) segment 1 (PB2)3807.10.000000e+002208/2281 (96%)EPI348857A/duck/Vietnam/NCVD-449/2010 (A/H5N1) segment 1 (PB2)3807.10.000000e+002207/2280 (96%)EPI348787A/duck/Vietnam/NCVD-458/2010 (A/H5N1) segment 1 (PB2)3807.10.000000e+002208/2281 (96%)EPI348920A/duck/Vietnam/NCVD-431/2010 (A/H5N1) segment 1 (PB2)3803.40.000000e+002206/2280 (96%)EPI620811A/chicken/Vietnam/NCVD-675/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI559047A/chicken/Vietnam/NCVD-A675/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI427326A/chicken/Vietnam/NCVD-675/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI424829A/duck/Vietnam/NCVD-711/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI424431A/chicken/Vietnam/NCVD-705/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI424423A/chicken/Vietnam/NCVD-704/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI424415A/chicken/Vietnam/NCVD-703/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI424407A/chicken/Vietnam/NCVD-702/2011 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI348892A/duck/Vietnam/NCVD-461/2010 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI348885A/duck/Vietnam/NCVD-460/2010 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI348878A/chicken/Vietnam/NCVD-459/2010 (A/H5N1) segment 1 (PB2)3801.50.000000e+002206/2280 (96%)EPI425533A/duck/Vietnam/NCVD-815/2010 (A/H5N1) segment 1 (PB2)3796.00.000000e+002205/2280 (96%)EPI425317A/duck/Vietnam/NCVD-1217/2012 (A/H5N1) segment 1 (PB2)3796.00.000000e+002205/2280 (96%)EPI424925A/duck/Vietnam/NCVD-947/2011 (A/H5N1) segment 1 (PB2)3796.00.000000e+002205/2280 (96%)EPI424901A/duck/Vietnam/NCVD-935/2011 (A/H5N1) segment 1 (PB2)3796.00.000000e+002206/2281 (96%)EPI424853A/duck/Vietnam/NCVD-1022/2011 (A/H5N1) segment 1 (PB2)3796.00.000000e+002206/2281 (96%)EPI350155A/chicken/Vietnam/NCVD-390/2009 (A/H5N1) segment 1 (PB2)3792.30.000000e+002204/2280 (96%)EPI427347A/chicken/Vietnam/NCVD-668/2010 (A/H5N1) segment 1 (PB2)3790.40.000000e+002204/2280 (96%)EPI425880A/duck/Vietnam/NCVD-1182/2012 (A/H5N1) segment 1 (PB2)3790.40.000000e+002205/2281 (96%)EPI425405A/duck/Vietnam/NCVD-1269/2012 (A/H5N1) segment 1 (PB2)3790.40.000000e+002205/2281 (96%)EPI425293A/duck/Vietnam/NCVD-669/2011 (A/H5N1) segment 1 (PB2)3790.40.000000e+002204/2280 (96%)EPI424693A/duck/Vietnam/NCVD-948/2011 (A/H5N1) segment 1 (PB2)3790.40.000000e+002204/2280 (96%)EPI559033A/duck/Vietnam/NCVD-KA260/2012 (A/H5N1) segment 1 (PB2)3784.90.000000e+002204/2281 (96%)EPI425768A/duck/Vietnam/NCVD-671/2011 (A/H5N1) segment 1 (PB2)3784.90.000000e+002203/2280 (96%)EPI425613A/chicken/Vietnam/NCVD-1488/2012 (A/H5N1) segment 1 (PB2)3784.90.000000e+002204/2281 (96%)EPI425493A/duck/Vietnam/NCVD-931/2011 (A/H5N1) segment 1 (PB2)3784.90.000000e+002204/2281 (96%)EPI425421A/duck/Vietnam/NCVD-1312/2012 (A/H5N1) segment 1 (PB2)3784.90.000000e+002204/2281 (96%)EPI425053A/duck/Vietnam/NCVD-760/2011 (A/H5N1) segment 1 (PB2)3784.90.000000e+002204/2281 (96%)EPI425045A/duck/Vietnam/NCVD-759/2011 (A/H5N1) segment 1 (PB2)3784.90.000000e+002204/2281 (96%)EPI425037A/duck/Vietnam/NCVD-758/2011 (A/H5N1) segment 1 (PB2)3784.90.000000e+002204/2281 (96%)EPI427340A/chicken/Vietnam/NCVD-700/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI425848A/duck/Vietnam/NCVD3-31/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI425824A/chicken/Vietnam/NCVD-1059/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI425549A/duck/Vietnam/NCVD-850/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI425397A/muscovy duck/Vietnam/NCVD-1256/2012 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI425373A/duck/Vietnam/NCVD-1234/2012 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI425365A/duck/Vietnam/NCVD-1232/2012 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI425349A/chicken/Vietnam/NCVD-1223/2012 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI425221A/duck/Vietnam/NCVD1-48/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI425141A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI424837A/duck/Vietnam/NCVD-952/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI424781A/duck/Vietnam/NCVD-861/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI424733A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI424399A/chicken/Vietnam/NCVD-699/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI399726A/environment/Hunan/3/2011 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI389951A/muscovy duck/Vietnam/LBM113/2012 (A/H5N1) segment 1 (PB2)3779.40.000000e+002203/2281 (96%)EPI168037A/grey heron/Hong Kong/1046/2008 (A/H5N1) segment 1 (PB2)3779.40.000000e+002202/2280 (96%)EPI350148A/chicken/Vietnam/NCVD-389/2009 (A/H5N1) segment 1 (PB2)3775.70.000000e+002199/2280 (96%)EPI559029A/duck/Vietnam/NCVD-KA30/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002201/2280 (96%)EPI461760A/duck/Hunan/S4234/2011 (A/H5N1) segment 1 (PB2)3773.80.000000e+002202/2281 (96%)EPI461020A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002202/2281 (96%)EPI432705A/muscovy duck/Vietnam/LBM260/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002203/2282 (96%)EPI432697A/muscovy duck/Vietnam/LBM258/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002203/2282 (96%)EPI425840A/duck/Vietnam/NCVD3-8/2011 (A/H5N1) segment 1 (PB2)3773.80.000000e+002202/2281 (96%)EPI425677A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002202/2281 (96%)EPI425341A/chicken/Vietnam/NCVD-753/2011 (A/H5N1) segment 1 (PB2)3773.80.000000e+002201/2280 (96%)EPI425245A/chicken/Vietnam/NCVD-1177/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002202/2281 (96%)EPI425029A/duck/Vietnam/NCVD-754/2011 (A/H5N1) segment 1 (PB2)3773.80.000000e+002201/2280 (96%)EPI424813A/duck/Vietnam/NCVD-712/2011 (A/H5N1) segment 1 (PB2)3773.80.000000e+002201/2280 (96%)EPI424773A/duck/Vietnam/NCVD-859/2011 (A/H5N1) segment 1 (PB2)3773.80.000000e+002201/2280 (96%)EPI424765A/duck/Vietnam/NCVD-851/2011 (A/H5N1) segment 1 (PB2)3773.80.000000e+002201/2280 (96%)EPI424661A/chicken/Vietnam/NCVD-1255/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002202/2281 (96%)EPI389943A/duck/Vietnam/LBM140/2012 (A/H5N1) segment 1 (PB2)3773.80.000000e+002202/2281 (96%)EPI559036A/duck/Vietnam/NCVD-KA309/2012 (A/H5N1) segment 1 (PB2)3768.30.000000e+002201/2281 (96%)EPI515000A/duck/Hunan/747/2011 (A/H0) segment 1 (PB2)3768.30.000000e+002201/2281 (96%)EPI427333A/chicken/Vietnam/NCVD-686/2011 (A/H5N1) segment 1 (PB2)3768.30.000000e+002200/2280 (96%)EPI425565A/chicken/Vietnam/NCVD-857/2011 (A/H5N1) segment 1 (PB2)3768.30.000000e+002200/2280 (96%)EPI425253A/dove/Vietnam/NCVD-1178/2012 (A/H5N1) segment 1 (PB2)3768.30.000000e+002201/2281 (96%)EPI425165A/chicken/Vietnam/NCVD-854/2011 (A/H5N1) segment 1 (PB2)3768.30.000000e+002200/2280 (96%)EPI424997A/duck/Vietnam/NCVD-714/2011 (A/H5N1) segment 1 (PB2)3768.30.000000e+002200/2280 (96%)EPI424909A/duck/Vietnam/NCVD-943/2011 (A/H5N1) segment 1 (PB2)3768.30.000000e+002200/2280 (96%)EPI348843A/duck/Vietnam/NCVD-432/2010 (A/H5N1) segment 1 (PB2)3768.30.000000e+002200/2280 (96%)EPI461676A/duck/Hunan/S4030/2011 (A/H5N1) segment 1 (PB2)3762.70.000000e+002199/2280 (96%)EPI425928A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI425920A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI425685A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI425621A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI425541A/duck/Vietnam/NCVD-825/2011 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI425501A/duck/Vietnam/NCVD-946/2011 (A/H5N1) segment 1 (PB2)3762.70.000000e+002201/2282 (96%)EPI425469A/chicken/Vietnam/NCVD-1247/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002201/2282 (96%)EPI425381A/chicken/Vietnam/NCVD-1248/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002201/2282 (96%)EPI425325A/muscovy duck/Vietnam/NCVD-1220/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI425213A/duck/Vietnam/NCVD1-37/2011 (A/H5N1) segment 1 (PB2)3762.70.000000e+002199/2280 (96%)EPI425101A/duck/Vietnam/NCVD-1497/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI424989A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI424933A/chicken/Vietnam/NCVD-752/2011 (A/H5N1) segment 1 (PB2)3762.70.000000e+002199/2280 (96%)EPI424917A/duck/Vietnam/NCVD-945/2011 (A/H5N1) segment 1 (PB2)3762.70.000000e+002201/2282 (96%)EPI424383A/chicken/Vietnam/NCVD-685/2011 (A/H5N1) segment 1 (PB2)3762.70.000000e+002199/2280 (96%)EPI389935A/duck/Vietnam/LBM139/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002200/2281 (96%)EPI389919A/duck/Vietnam/LBM133/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002201/2282 (96%)EPI389911A/duck/Vietnam/LBM132/2012 (A/H5N1) segment 1 (PB2)3762.70.000000e+002201/2282 (96%)EPI559203A/duck/Vietnam/NCVD-KA415/2012 (A/H5N2) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI559041A/chicken/Vietnam/NCVD-KA432/2013 (A/H5N1) segment 1 (PB2)3757.20.000000e+002200/2282 (96%)EPI559035A/duck/Vietnam/NCVD-KA262/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI531370A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI461533A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 1 (PB2)3757.20.000000e+002200/2282 (96%)EPI425936A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425896A/duck/Vietnam/NCVD-1251/2011 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425816A/muscovy duck/Vietnam/NCVD-1049/2011 (A/H5N1) segment 1 (PB2)3757.20.000000e+002198/2280 (96%)EPI425776A/chicken/Vietnam/NCVD-1034/2011 (A/H5N1) segment 1 (PB2)3757.20.000000e+002200/2282 (96%)EPI425645A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425629A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425389A/duck/Vietnam/NCVD-1253/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425301A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425125A/duck/Vietnam/NCVD-1872/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425061A/duck/Vietnam/NCVD-1252/2011 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425021A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI425013A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI424981A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI424725A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI424717A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI424709A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI424701A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 1 (PB2)3757.20.000000e+002199/2281 (96%)EPI559039A/duck/Vietnam/NCVD-KA368/2012 (A/H5N1) segment 1 (PB2)3751.70.000000e+002198/2281 (96%)EPI559038A/duck/Vietnam/NCVD-KA311/2012 (A/H5N1) segment 1 (PB2)3751.70.000000e+002198/2281 (96%)EPI559034A/duck/Vietnam/NCVD-KA261/2012 (A/H5N1) segment 1 (PB2)3751.70.000000e+002199/2282 (96%)EPI503725A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 1 (PB2)3751.70.000000e+002198/2281 (96%)

  18. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI645036A/swine/Guangdong/1/2014 (A/H5N6) segment 7 (MP)1814.50.000000e+00982/982 (100%)EPI645043A/swine/Guangdong/2/2014 (A/H5N6) segment 7 (MP)1809.00.000000e+00981/982 (99%)EPI602494A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI602422A/chicken/Dongguan/3363/2013 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI602415A/chicken/Dongguan/2690/2013 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI599295A/chicken/Shenzhen/552/2013 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI593892A/Guangzhou/39715/2014 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI590816A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI550766A/duck/Laos/XBY004/2014 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI550755A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI531459A/duck/Guangdong/GD01/2014 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI530057A/duck/Jiangxi/95/2014 (A/H5N6) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI602487A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI602480A/chicken/Shenzhen/715/2013 (A/H5N6) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI599336A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI599323A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI599316A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI599302A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI599288A/chicken/Shenzhen/433/2013 (A/H5N6) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI599349A/chicken/Dongguan/4259/2013 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI599342A/duck/Dongguan/3069/2013 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596548A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596541A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596537A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596533A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596529A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596525A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596518A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596517A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI596513A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI593899A/duck/Guangzhou/41227/2014 (A/H5N6) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI599658A/goose/Shantou/1791/2014 (A/H5N6) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI599651A/goose/Shantou/1763/2014 (A/H5N6) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI599330A/duck/Dongguan/2685/2013 (A/H5N6) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI590809A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI599665A/goose/Shantou/1806/2014 (A/H5N6) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI530066A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 7 (MP)1775.80.000000e+00976/983 (99%)EPI424667A/duck/Vietnam/NCVD-1940/2012 (A/H5N1) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI590906A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI590858A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI590857A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI585964A/chicken/AnNing/1/2014 (A/H5N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI585971A/chicken/DaLi/302/2014 (A/H5N1) segment 7 (MP)1759.10.000000e+00972/982 (98%)EPI585954A/chicken/TongHai/302/2014 (A/H5N1) segment 7 (MP)1759.10.000000e+00972/982 (98%)EPI438172A/Shenzhen/1/2011 (A/H5N1) segment 7 (MP)1759.10.000000e+00972/982 (98%)EPI622554A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI461758A/duck/Hunan/S4220/2011 (A/H5N1) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI425283A/duck/Vietnam/NCVD-674/2011 (A/H5N1) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI425275A/duck/Vietnam/NCVD-673/2011 (A/H5N1) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI405131A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 7 (MP)1753.60.000000e+00971/982 (98%)EPI559179A/duck/Vietnam/NCVD-A672/2011 (A/H5N1) segment 7 (MP)1749.90.000000e+00969/980 (98%)EPI438232A/oriental magpie robin/Hong Kong/470.1/2011 (A/H5N1) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI337023A/duck/Zhejiang/2248/2011 (A/H5N1) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI337021A/duck/Zhejiang/2244/2011 (A/H5N1) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI337020A/duck/Zhejiang/2243/2011 (A/H5N1) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI337019A/duck/Zhejiang/2242/2011 (A/H5N1) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI337018A/duck/Zhejiang/224/2011 (A/H5N1) segment 7 (MP)1748.10.000000e+00970/982 (98%)EPI600479A/quail/Nanchang/6631/2013 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI559173A/chicken/Vietnam/NCVD-KA423/2013 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI438234A/large billed crow/Hong Kong/497/2011 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI438233A/brown-headed gull/Hong Kong/709/2011 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI425902A/chicken/Vietnam/NCVD-1254/2011 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI424389A/duck/Vietnam/NCVD-1283/2012 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI375434A/Hong Kong/5923/2012 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI337017A/duck/Zhejiang/213/2011 (A/H5N1) segment 7 (MP)1742.50.000000e+00969/982 (98%)EPI610337A/chicken/Fujian/FZ02/2011 (A/H9N2) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI600486A/duck/Nanchang/9789/2013 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI567040A/muscovy duck/Quang Ninh/48c1-4-1/2013 (A/H5N1) segment 7 (MP)1737.00.000000e+00969/983 (98%)EPI559161A/duck/Vietnam/NCVD-KA25/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI475610A/wild duck/Fujian/2/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI475606A/wild duck/Fujian/1/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI461539A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI461491A/duck/Quanh Ninh/53/2013 (A/H5N1) segment 7 (MP)1737.00.000000e+00969/983 (98%)EPI461025A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI460935A/muscovy duck/Quanh Ninh/49/2013 (A/H5N1) segment 7 (MP)1737.00.000000e+00969/983 (98%)EPI425942A/chicken/Vietnam/NCVD-715/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425926A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425918A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425870A/duck/Vietnam/NCVD-1163/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425862A/duck/Vietnam/NCVD-1162/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425854A/duck/Vietnam/NCVD-1161/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425683A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425675A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425635A/duck/Vietnam/NCVD-1931/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425227A/duck/Vietnam/NCVD-1160/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425179A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425171A/chicken/Vietnam/NCVD-1942/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425147A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425139A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI425107A/duck/Vietnam/NCVD-1943/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI424987A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI424979A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI424939A/duck/Vietnam/NCVD-885/2010 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI424731A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI387938A/muscovy duck/Vietnam/LBM66/2011 (A/H5N1) segment 7 (MP)1737.00.000000e+00968/982 (98%)EPI647788A/muscovy duck/Vietnam/HU1-1144/2014 (A/H5N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI647787A/duck/Vietnam/HU1-1511/2014 (A/H5N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI647785A/duck/Vietnam/HU1-1507/2014 (A/H5N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI589816A/duck/Nha Trang/75c131/2014 (A/H5N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI589596A/muscovy duck/Quang Ninh/7c121/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI589485A/muscovy duck/Quang Ninh/5c112/2013 (A/H5N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI589400A/muscovy duck/Quang Ninh/4c111/2013 (A/H5N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI585734A/swan goose/Jilin/JL01/2014 (A/H5N6) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI559174A/chicken/Vietnam/NCVD-KA432/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI559171A/duck/Vietnam/NCVD-KA311/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI559168A/duck/Vietnam/NCVD-KA262/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI559165A/duck/Vietnam/NCVD-KA250/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545542A/duck/Khanhhoa/CVVI-23/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545541A/duck/Khanhhoa/CVVI-22/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545536A/duck/Khanhhoa/CVVI-17/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545532A/chicken/Khanhhoa/CVVI-13/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545527A/duck/Khanhhoa/CVVI-08/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545525A/duck/Khanhhoa/CVVI-06/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545524A/duck/Khanhhoa/CVVI-05/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545523A/duck/Khanhhoa/CVVI-04/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545522A/duck/Khanhhoa/CVVI-03/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545521A/chicken/Khanhhoa/CVVI-02/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI545520A/duck/Khanhhoa/CVVI-01/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI471176A/muscovy duck/Vietnam/LBM436/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI471134A/muscovy duck/Vietnam/LBM438/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI459250A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI459242A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI438170A/swine/Guangxi/ns592/2011 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425651A/duck/Vietnam/NCVD-1968/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425643A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425627A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425619A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425595A/duck/Vietnam/NCVD-1463/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425315A/duck/Vietnam/NCVD-1217/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425307A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425267A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425195A/duck/Vietnam/NCVD129-7/2011 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425155A/duck/Vietnam/NCVD-1937/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425011A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI425003A/chicken/Vietnam/NCVD-1437/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424867A/duck/Vietnam/NCVD-1026/2011 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424859A/duck/Vietnam/NCVD-1025/2011 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424739A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424723A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424699A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424683A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424191A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424183A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI424175A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI321506A/chicken/Vietnam/27262/2009 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI320683A/Muscovy duck/Vietnam/18151/2009 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI168059A/magpie robin/Hong Kong/1897/2008 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI168043A/grey heron/Hong Kong/1046/2008 (A/H5N1) segment 7 (MP)1731.40.000000e+00967/982 (98%)EPI251433A/Guangxi/1/2009 (A/H5N1) segment 7 (MP)1727.70.000000e+00966/982 (98%)EPI590901A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI589812A/duck/Quang Ninh/15c111/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI585727A/cat/Sichuan/SC18/2014 (A/H5N6) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI567014A/duck/Quang Ninh/13c1-2-1/2013 (A/H5N2) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI567006A/duck/Vietnam/LBM360c1-4-1/2013 (A/H5N6) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI559175A/chicken/Vietnam/NCVD-KA435/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI547405A/environment/Zhenjiang/C13/2013 (A/H5N6) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI545540A/duck/Khanhhoa/CVVI-21/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI545539A/duck/Khanhhoa/CVVI-20/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI545538A/duck/Khanhhoa/CVVI-19/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI545534A/duck/Khanhhoa/CVVI-15/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI545533A/duck/Khanhhoa/CVVI-14/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI516034A/chicken/Yinmarbin/A295/2010 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI515018A/duck/Hunan/749/2011 (A/H0) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI503719A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI489680A/tiger/Jiangsu/01/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI460951A/muscovy duck/Vietnam/LBM399/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI460943A/muscovy duck/Vietnam/LBM398/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI460733A/muscovy duck/Vietnam/LBM335/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI459867A/muscovy duck/Vietnam/LBM330/2013 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI438245A/chicken/Viet Nam/3/2010 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI438237A/barn swallow/Hong Kong/1161/2010 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI425667A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI425483A/duck/Vietnam/NCVD-927/2011 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI425443A/duck/Vietnam/NCVD-1219/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI425299A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI425131A/duck/Vietnam/NCVD-1899/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI425123A/duck/Vietnam/NCVD-1872/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI425019A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424891A/chicken/Vietnam/NCVD-921/2011 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424883A/duck/Vietnam/NCVD-920/2011 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424875A/duck/Vietnam/NCVD-1029/2011 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424843A/duck/Vietnam/NCVD-1018/2011 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424779A/duck/Vietnam/NCVD-861/2011 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424715A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424707A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI424199A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI351364A/duck/Vietnam/NCVD-423/2010 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI350153A/chicken/Vietnam/NCVD-390/2009 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI350146A/chicken/Vietnam/NCVD-389/2009 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI348918A/duck/Vietnam/NCVD-431/2010 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI348855A/duck/Vietnam/NCVD-449/2010 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI321591A/duck/Vietnam/27354/2009 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI321498A/chicken/Vietnam/20346/2009 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI168035A/great egret/Hong Kong/807/2008 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI168011A/grey heron/Hong Kong/3088/2007 (A/H5N1) segment 7 (MP)1725.90.000000e+00966/982 (98%)EPI347306A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 7 (MP)1724.00.000000e+00953/963 (98%)EPI601981A/black chicken/Jiangxi/10131/2014 (A/H0) segment 7 (MP)1722.20.000000e+00967/984 (98%)EPI622528A/chicken/Vietnam/NCVD-398/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI602116A/environment/Jiangxi/10170/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00967/984 (98%)EPI602110A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00967/984 (98%)EPI601993A/black chicken/Jiangxi/10136/2014 (A/H0) segment 7 (MP)1720.40.000000e+00967/984 (98%)EPI599372A/environment/Jiangxi/10171/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00967/984 (98%)EPI599363A/environment/Jiangxi/10164/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00967/984 (98%)EPI599356A/duck/Jiangxi/10160/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00967/984 (98%)EPI590905A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00966/983 (98%)EPI590900A/chicken/Sichuan/NCJPL1/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00966/983 (98%)EPI545555A/duck/Khanhhoa/CVVI-36/2014 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI545531A/chicken/Khanhhoa/CVVI-12/2013 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI545530A/chicken/Khanhhoa/CVVI-11/2013 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI545529A/duck/Khanhhoa/CVVI-10/2013 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI545528A/chicken/Khanhhoa/CVVI-09/2013 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI545526A/duck/Khanhhoa/CVVI-07/2013 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI539363A/Viet Nam/CM32/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI533589A/Sichuan/26221/2014 (A/H5N6) segment 7 (MP)1720.40.000000e+00966/983 (98%)EPI531376A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI461691A/duck/Hunan/S4030/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI459260A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 7 (MP)1720.40.000000e+00966/983 (98%)EPI427345A/chicken/Vietnam/NCVD-700/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425950A/chicken/Vietnam/NCVD-1038/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425934A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425806A/duck/Vietnam/NCVD-1048/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425798A/duck/Vietnam/NCVD-1044/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425790A/duck/Vietnam/NCVD-1042/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425782A/chicken/Vietnam/NCVD-1040/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425555A/duck/Vietnam/NCVD-645/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425531A/duck/Vietnam/NCVD-815/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425523A/chicken/Vietnam/NCVD-802/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425427A/duck/Vietnam/NCVD-1207/2012 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425243A/chicken/Vietnam/NCVD-1177/2012 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425051A/duck/Vietnam/NCVD-760/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425043A/duck/Vietnam/NCVD-759/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI425035A/duck/Vietnam/NCVD-758/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424995A/duck/Vietnam/NCVD-714/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424971A/chicken/Vietnam/NCVD-710/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424963A/chicken/Vietnam/NCVD-709/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424955A/duck/Vietnam/NCVD-891/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424947A/duck/Vietnam/NCVD-890/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424827A/duck/Vietnam/NCVD-711/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424819A/duck/Vietnam/NCVD-806/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424811A/duck/Vietnam/NCVD-712/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424771A/duck/Vietnam/NCVD-859/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424763A/duck/Vietnam/NCVD-851/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424397A/chicken/Vietnam/NCVD-699/2011 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI424357A/duck/Vietnam/NCVD-1206/2012 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI350440A/chicken/Vietnam/NCVD-399/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI350432A/chicken/Vietnam/NCVD-398/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI348890A/duck/Vietnam/NCVD-461/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI348883A/duck/Vietnam/NCVD-460/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI348876A/chicken/Vietnam/NCVD-459/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)EPI348862A/duck/Vietnam/NCVD-456/2010 (A/H5N1) segment 7 (MP)1720.40.000000e+00965/982 (98%)

  19. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI645044A/swine/Guangdong/2/2014 (A/H5N6) segment 6 (NA)2549.50.000000e+001380/1380 (100%)EPI645037A/swine/Guangdong/1/2014 (A/H5N6) segment 6 (NA)2549.50.000000e+001380/1380 (100%)EPI599301A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 6 (NA)2521.80.000000e+001375/1380 (99%)EPI599335A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 6 (NA)2516.30.000000e+001374/1380 (99%)EPI599329A/duck/Dongguan/2685/2013 (A/H5N6) segment 6 (NA)2510.70.000000e+001373/1380 (99%)EPI531458A/duck/Guangdong/GD01/2014 (A/H5N6) segment 6 (NA)2510.70.000000e+001373/1380 (99%)EPI602421A/chicken/Dongguan/3363/2013 (A/H5N6) segment 6 (NA)2505.20.000000e+001372/1380 (99%)EPI602032A/chicken/Dongguan/4190/2013 (A/H0) segment 6 (NA)2505.20.000000e+001372/1380 (99%)EPI599341A/duck/Dongguan/3069/2013 (A/H5N6) segment 6 (NA)2505.20.000000e+001372/1380 (99%)EPI530065A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 6 (NA)2505.20.000000e+001372/1380 (99%)EPI602479A/chicken/Shenzhen/715/2013 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI602414A/chicken/Dongguan/2690/2013 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI599294A/chicken/Shenzhen/552/2013 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI599287A/chicken/Shenzhen/433/2013 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI530056A/duck/Jiangxi/95/2014 (A/H5N6) segment 6 (NA)2499.60.000000e+001371/1380 (99%)EPI602493A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 6 (NA)2494.10.000000e+001370/1380 (99%)EPI602019A/chicken/Shenzhen/2072/2013 (A/H0) segment 6 (NA)2494.10.000000e+001370/1380 (99%)EPI599322A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 6 (NA)2494.10.000000e+001370/1380 (99%)EPI550765A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA)2494.10.000000e+001371/1381 (99%)EPI550754A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 6 (NA)2494.10.000000e+001371/1381 (99%)EPI602486A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 6 (NA)2488.60.000000e+001369/1380 (99%)EPI601944A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA)2488.60.000000e+001369/1380 (99%)EPI599315A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 6 (NA)2488.60.000000e+001369/1380 (99%)EPI602319A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602312A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602305A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602298A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602274A/chicken/Jiangxi/13238/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602267A/chicken/Jiangxi/13235/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602260A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602253A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602236A/chicken/Jiangxi/13264/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602229A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602222A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602208A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602201A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602155A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI602048A/chicken/Dongguan/2818/2013 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601464A/chicken/Jiangxi/13211/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601453A/chicken/Jiangxi/13198/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601443A/chicken/Jiangxi/13196/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601406A/chicken/Jiangxi/13253/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601394A/chicken/Jiangxi/13237/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601342A/chicken/Jiangxi/13272/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601197A/chicken/Jiangxi/13216/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601190A/chicken/Jiangxi/13215/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601180A/chicken/Jiangxi/13212/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601171A/chicken/Jiangxi/13206/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601162A/chicken/Jiangxi/13204/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601152A/chicken/Jiangxi/13246/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601126A/chicken/Jiangxi/13228/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601117A/chicken/Jiangxi/13219/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601099A/chicken/Jiangxi/13271/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI601080A/chicken/Jiangxi/13260/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI600276A/chicken/Jiangxi/13275/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI600269A/chicken/Jiangxi/13263/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI600255A/chicken/Jiangxi/13248/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI600241A/chicken/Jiangxi/13222/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI600234A/chicken/Jiangxi/13218/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI600220A/chicken/Jiangxi/13208/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI600199A/chicken/Jiangxi/12782/2014 (A/H10N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI599657A/goose/Shantou/1791/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI599348A/chicken/Dongguan/4259/2013 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596624A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596618A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596612A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596606A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596600A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596594A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596588A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596576A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI593183A/chicken/Jiangxi/14535/2014 (A/H7N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI593140A/chicken/Jiangxi/14510/2014 (A/H0) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI593123A/chicken/Jiangxi/14501/2014 (A/H7N6) segment 6 (NA)2483.00.000000e+001368/1380 (99%)EPI596582A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 6 (NA)2479.30.000000e+001367/1380 (99%)EPI602246A/chicken/Jiangxi/13217/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI602239A/chicken/Jiangxi/13213/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI602215A/chicken/Jiangxi/13249/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI602162A/chicken/Jiangxi/13274/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI601474A/chicken/Jiangxi/13232/2014 (A/H0) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI601145A/chicken/Jiangxi/13244/2014 (A/H0) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI601135A/chicken/Jiangxi/13233/2014 (A/H0) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI601088A/chicken/Jiangxi/13262/2014 (A/H0) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI601070A/chicken/Jiangxi/13259/2014 (A/H0) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI600248A/chicken/Jiangxi/13242/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI600227A/chicken/Jiangxi/13214/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI600213A/chicken/Jiangxi/13202/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI600192A/chicken/Jiangxi/12272/2014 (A/H10N6) segment 6 (NA)2477.50.000000e+001368/1381 (99%)EPI599650A/goose/Shantou/1763/2014 (A/H5N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI592609A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI590815A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI590808A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 6 (NA)2477.50.000000e+001367/1380 (99%)EPI641397A/chicken/Yunnan/25A/2015 (A/H5N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI615107A/duck/Guangxi/175D12/2014 (A/H3N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI602194A/chicken/Jiangxi/13240/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI602190A/chicken/Jiangxi/14512/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI601242A/chicken/Jiangxi/13203/2014 (A/H0) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI600262A/chicken/Jiangxi/13256/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI600206A/chicken/Jiangxi/13200/2014 (A/H10N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI599664A/goose/Shantou/1806/2014 (A/H5N6) segment 6 (NA)2471.90.000000e+001366/1380 (98%)EPI641400A/Yunnan/0127/2015 (A/H5N6) segment 6 (NA)2455.30.000000e+001363/1380 (98%)EPI601415A/chicken/Jiangxi/13257/2014 (A/H0) segment 6 (NA)2455.30.000000e+001364/1381 (98%)EPI641395A/chicken/Yunnan/22/2015 (A/H5N6) segment 6 (NA)2449.80.000000e+001362/1380 (98%)EPI641393A/chicken/Yunnan/19/2015 (A/H5N6) segment 6 (NA)2449.80.000000e+001362/1380 (98%)EPI593898A/duck/Guangzhou/41227/2014 (A/H5N6) segment 6 (NA)2438.70.000000e+001361/1381 (98%)EPI593891A/Guangzhou/39715/2014 (A/H5N6) segment 6 (NA)2427.60.000000e+001358/1380 (98%)EPI314283A/swine/Guangdong/K6/2010 (A/H6N6) segment 6 (NA)2394.40.000000e+001352/1380 (97%)EPI500957A/Duck/Guangdong/S1419/2011 (A/H6N6) segment 6 (NA)2377.80.000000e+001349/1380 (97%)EPI602040A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA)2316.80.000000e+001338/1380 (96%)EPI501037A/Duck/Guangdong/S4251/2010 (A/H6N6) segment 6 (NA)2289.10.000000e+001336/1383 (96%)EPI364045A/duck/Shantou/1984/2007 (A/H6N6) segment 6 (NA)2272.50.000000e+001331/1381 (96%)EPI550758A/duck/Laos/LPQ002/2014 (A/H5N6) segment 6 (NA)2217.10.000000e+001219/1228 (99%)EPI364271A/duck/Shantou/12958/2006 (A/H6N6) segment 6 (NA)2191.20.000000e+001318/1382 (95%)EPI550760A/chicken/Laos/XBY003/2014 (A/H5N6) segment 6 (NA)2187.60.000000e+001201/1209 (99%)EPI268291A/duck/Fujian/11661/2005 (A/H6N6) segment 6 (NA)2145.10.000000e+001313/1386 (94%)EPI363773A/duck/Fujian/958/2006 (A/H6N6) segment 6 (NA)2139.50.000000e+001312/1386 (94%)EPI550769A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA)2108.10.000000e+001153/1159 (99%)EPI345777A/goose/Eastern China/17/2010 (A/H6N6) segment 6 (NA)1975.20.000000e+001306/1415 (92%)EPI268294A/mallard/Shantou/972/2005 (A/H6N6) segment 6 (NA)1967.80.000000e+001163/1211 (96%)EPI268297A/duck/Shantou/6233/2004 (A/H6N6) segment 6 (NA)1951.20.000000e+001160/1211 (95%)EPI364732A/duck/Shantou/9350/2006 (A/H6N6) segment 6 (NA)1941.90.000000e+001160/1213 (95%)EPI364554A/duck/Shantou/2798/2006 (A/H6N6) segment 6 (NA)1941.90.000000e+001161/1214 (95%)EPI364227A/duck/Shantou/3389/2006 (A/H6N6) segment 6 (NA)1941.90.000000e+001160/1213 (95%)EPI268292A/duck/Shantou/11392/2005 (A/H6N6) segment 6 (NA)1940.10.000000e+001158/1211 (95%)EPI364728A/duck/Shantou/7429/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364331A/duck/Shantou/19616/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364303A/duck/Shantou/16158/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364301A/duck/Shantou/16124/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364287A/duck/Shantou/14877/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364277A/duck/Shantou/13655/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364267A/duck/Shantou/11228/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364265A/duck/Shantou/11034/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364256A/duck/Shantou/9702/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364254A/duck/Shantou/9374/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI363681A/duck/Shantou/14841/2006 (A/H6N6) segment 6 (NA)1936.40.000000e+001159/1213 (95%)EPI364339A/duck/Fujian/2292/2006 (A/H6N6) segment 6 (NA)1934.60.000000e+001159/1213 (95%)EPI268293A/duck/Shantou/8365/2005 (A/H6N6) segment 6 (NA)1934.60.000000e+001157/1211 (95%)EPI364861A/duck/Shantou/18088/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001159/1214 (95%)EPI364804A/duck/Shantou/15048/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001158/1213 (95%)EPI364770A/duck/Shantou/10143/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001158/1213 (95%)EPI364299A/duck/Shantou/15940/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001159/1214 (95%)EPI364263A/duck/Shantou/10284/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001158/1213 (95%)EPI364244A/duck/Shantou/5697/2006 (A/H6N6) segment 6 (NA)1930.90.000000e+001159/1214 (95%)EPI268289A/goose/Shantou/18647/2005 (A/H6N6) segment 6 (NA)1930.90.000000e+001158/1213 (95%)EPI365031A/duck/Fujian/1641/2006 (A/H6N6) segment 6 (NA)1929.00.000000e+001158/1213 (95%)EPI364444A/duck/Fujian/3046/2006 (A/H6N6) segment 6 (NA)1929.00.000000e+001158/1213 (95%)EPI364273A/duck/Shantou/13252/2006 (A/H6N6) segment 6 (NA)1929.00.000000e+001154/1208 (95%)EPI363837A/duck/Fujian/6708/2006 (A/H6N6) segment 6 (NA)1929.00.000000e+001158/1213 (95%)EPI363805A/duck/Fujian/3354/2006 (A/H6N6) segment 6 (NA)1929.00.000000e+001157/1212 (95%)EPI364810A/duck/Shantou/16147/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001158/1214 (95%)EPI364626A/duck/Shantou/5041/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001158/1214 (95%)EPI364297A/duck/Shantou/15798/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI364279A/duck/Shantou/14163/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI363601A/wild duck/Shantou/2441/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001159/1215 (95%)EPI363593A/duck/Shantou/1165/2006 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI268288A/duck/Shantou/20313/2005 (A/H6N6) segment 6 (NA)1925.30.000000e+001157/1213 (95%)EPI365123A/duck/Fujian/2087/2007 (A/H6N6) segment 6 (NA)1923.50.000000e+001157/1213 (95%)EPI365058A/duck/Fujian/2606/2006 (A/H6N6) segment 6 (NA)1923.50.000000e+001157/1213 (95%)EPI364530A/duck/Fujian/6860/2007 (A/H6N6) segment 6 (NA)1923.50.000000e+001157/1213 (95%)EPI364450A/duck/Fujian/6222/2006 (A/H6N6) segment 6 (NA)1923.50.000000e+001157/1213 (95%)EPI364448A/duck/Fujian/4008/2006 (A/H6N6) segment 6 (NA)1923.50.000000e+001156/1212 (95%)EPI364337A/duck/Fujian/1904/2006 (A/H6N6) segment 6 (NA)1923.50.000000e+001157/1213 (95%)EPI363829A/duck/Fujian/5498/2006 (A/H6N6) segment 6 (NA)1923.50.000000e+001157/1213 (95%)EPI268299A/wild duck/Shantou/192/2004 (A/H6N6) segment 6 (NA)1923.50.000000e+001155/1211 (95%)EPI268290A/duck/Fujian/12035/2005 (A/H6N6) segment 6 (NA)1923.50.000000e+001157/1213 (95%)EPI364844A/duck/Shantou/17036/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364812A/duck/Shantou/16144/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364784A/duck/Shantou/14531/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364293A/duck/Shantou/15479/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364239A/duck/Shantou/4980/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001157/1214 (95%)EPI364237A/duck/Shantou/4938/2006 (A/H6N6) segment 6 (NA)1919.80.000000e+001156/1213 (95%)EPI364037A/duck/Shantou/1240/2007 (A/H6N6) segment 6 (NA)1919.80.000000e+001157/1214 (95%)EPI365155A/duck/Fujian/2749/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI365131A/duck/Fujian/2278/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI365115A/duck/Fujian/1879/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI365107A/duck/Fujian/912/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI365103A/duck/Fujian/816/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI365095A/duck/Fujian/402/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI365074A/duck/Fujian/6955/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001156/1213 (95%)EPI365066A/duck/Fujian/6605/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001156/1213 (95%)EPI365050A/duck/Fujian/2281/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI365042A/duck/Fujian/1674/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001156/1213 (95%)EPI364497A/duck/Fujian/2582/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI364494A/duck/Fujian/1772/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI364492A/duck/Fujian/1600/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001156/1213 (95%)EPI364480A/duck/Fujian/576/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI364474A/duck/Fujian/118/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI364470A/duck/Fujian/10706/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI364460A/duck/Fujian/7830/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001155/1212 (95%)EPI364458A/duck/Fujian/7652/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI364446A/duck/Fujian/3574/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001156/1213 (95%)EPI364076A/duck/Fujian/1565/2007 (A/H6N6) segment 6 (NA)1917.90.000000e+001157/1214 (95%)EPI363781A/duck/Fujian/1651/2006 (A/H6N6) segment 6 (NA)1917.90.000000e+001156/1213 (95%)EPI364092A/duck/Fujian/2018/2007 (A/H6N6) segment 6 (NA)1916.10.000000e+001156/1213 (95%)EPI363797A/duck/Fujian/2854/2006 (A/H6N6) segment 6 (NA)1916.10.000000e+001155/1212 (95%)EPI364870A/duck/Shantou/18729/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364852A/duck/Shantou/17081/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364634A/duck/Shantou/5051/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364329A/duck/Shantou/19369/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364317A/duck/Shantou/18070/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364315A/duck/Shantou/17800/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364309A/duck/Shantou/16810/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364305A/duck/Shantou/16440/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI364283A/duck/Shantou/14607/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI364235A/duck/Shantou/4414/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI364013A/duck/Shantou/358/2007 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI363757A/duck/Shantou/19597/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI363689A/duck/Shantou/17058/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001156/1214 (95%)EPI363633A/duck/Shantou/4636/2006 (A/H6N6) segment 6 (NA)1914.20.000000e+001155/1213 (95%)EPI365139A/duck/Fujian/2356/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI365088A/duck/Fujian/145/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364532A/duck/Fujian/6908/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364514A/duck/Fujian/4185/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001155/1213 (95%)EPI364512A/duck/Fujian/3756/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364510A/duck/Fujian/3460/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364490A/duck/Fujian/1322/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364468A/duck/Fujian/9308/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364464A/duck/Fujian/8388/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364462A/duck/Fujian/8114/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364454A/duck/Fujian/6908/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364335A/duck/Fujian/1348/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001155/1213 (95%)EPI364117A/duck/Fujian/3264/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364060A/duck/Fujian/378/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI363877A/duck/Fujian/11418/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI363853A/duck/Fujian/9062/2006 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI363739A/duck/Fujian/2787/2007 (A/H6N6) segment 6 (NA)1912.40.000000e+001156/1214 (95%)EPI364586A/duck/Shantou/4129/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001155/1214 (95%)EPI364325A/duck/Shantou/19097/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364323A/duck/Shantou/18765/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364321A/duck/Shantou/18709/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001155/1214 (95%)EPI364313A/duck/Shantou/17426/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001155/1214 (95%)EPI364295A/duck/Shantou/15772/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364289A/duck/Shantou/15037/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364281A/duck/Shantou/14565/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI364021A/duck/Shantou/494/2007 (A/H6N6) segment 6 (NA)1908.70.000000e+001154/1213 (95%)EPI363665A/wild duck/Shantou/9466/2006 (A/H6N6) segment 6 (NA)1908.70.000000e+001155/1214 (95%)EPI365147A/duck/Fujian/2483/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI365109A/duck/Fujian/1107/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001156/1215 (95%)EPI365099A/duck/Fujian/679/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI365080A/duck/Fujian/8807/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364997A/duck/Fujian/7375/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364888A/duck/Fujian/2984/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364520A/duck/Fujian/4719/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364504A/duck/Fujian/2969/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364502A/duck/Fujian/2818/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364452A/duck/Fujian/6634/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364341A/duck/Fujian/2595/2006 (A/H6N6) segment 6 (NA)1906.90.000000e+001154/1213 (95%)EPI364187A/duck/Fujian/7818/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364109A/duck/Fujian/2321/2007 (A/H6N6) segment 6 (NA)1906.90.000000e+001155/1214 (95%)EPI364102A/duck/Fujian/2060/2007 (A/H6N6) segment 6 (NA)1905.00.000000e+001154/1213 (95%)

  20. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    AlignSegment-IDNameScoreE-ValueIdentityEPI645049A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI645042A/swine/Guangdong/2/2014 (A/H5N6) segment 4 (HA)3142.30.000000e+001703/1704 (99%)EPI602419A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA)3129.30.000000e+001700/1703 (99%)EPI602028A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA)3125.70.000000e+001699/1703 (99%)EPI599339A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA)3123.80.000000e+001699/1703 (99%)EPI599299A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA)3123.80.000000e+001699/1703 (99%)EPI602412A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA)3118.30.000000e+001698/1703 (99%)EPI602045A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA)3118.30.000000e+001698/1703 (99%)EPI599333A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA)3118.30.000000e+001698/1703 (99%)EPI599327A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA)3118.30.000000e+001698/1703 (99%)EPI531456A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA)3118.30.000000e+001699/1704 (99%)EPI602477A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA)3112.70.000000e+001697/1703 (99%)EPI599662A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA)3112.70.000000e+001697/1703 (99%)EPI599655A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA)3112.70.000000e+001697/1703 (99%)EPI599648A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA)3112.70.000000e+001697/1703 (99%)EPI599285A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA)3112.70.000000e+001697/1703 (99%)EPI530054A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA)3112.70.000000e+001697/1703 (99%)EPI602103A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA)3107.20.000000e+001696/1703 (99%)EPI599346A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA)3107.20.000000e+001696/1703 (99%)EPI599292A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA)3107.20.000000e+001696/1703 (99%)EPI599320A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA)3101.60.000000e+001695/1703 (99%)EPI599313A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA)3101.60.000000e+001695/1703 (99%)EPI602491A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA)3096.10.000000e+001694/1703 (99%)EPI602484A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA)3096.10.000000e+001694/1703 (99%)EPI601941A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA)3096.10.000000e+001694/1703 (99%)EPI590813A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 4 (HA)3096.10.000000e+001694/1703 (99%)EPI530063A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA)3096.10.000000e+001694/1703 (99%)EPI590806A/duck/Jiangxi/NCDZT1123/2014 (A/H5N6) segment 4 (HA)3090.60.000000e+001693/1703 (99%)EPI593889A/Guangzhou/39715/2014 (A/H5N6) segment 4 (HA)3085.00.000000e+001692/1703 (99%)EPI550768A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA)3073.90.000000e+001690/1703 (99%)EPI550763A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA)3073.90.000000e+001690/1703 (99%)EPI550759A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA)3073.90.000000e+001690/1703 (99%)EPI550757A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA)3073.90.000000e+001690/1703 (99%)EPI550752A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 4 (HA)3068.40.000000e+001689/1703 (99%)EPI596610A/duck/Vietnam/LBM758/2014 (A/H5N6) segment 4 (HA)3064.70.000000e+001688/1703 (99%)EPI596598A/muscovy duck/Vietnam/LBM756/2014 (A/H5N6) segment 4 (HA)3062.90.000000e+001688/1703 (99%)EPI596592A/muscovy duck/Vietnam/LBM755/2014 (A/H5N6) segment 4 (HA)3062.90.000000e+001688/1703 (99%)EPI596586A/muscovy duck/Vietnam/LBM754/2014 (A/H5N6) segment 4 (HA)3062.90.000000e+001688/1703 (99%)EPI596580A/duck/Vietnam/LBM752/2014 (A/H5N6) segment 4 (HA)3062.90.000000e+001688/1703 (99%)EPI596574A/duck/Vietnam/LBM751/2014 (A/H5N6) segment 4 (HA)3062.90.000000e+001688/1703 (99%)EPI593896A/duck/Guangzhou/41227/2014 (A/H5N6) segment 4 (HA)3062.90.000000e+001688/1703 (99%)EPI596622A/duck/Vietnam/LBM760/2014 (A/H5N6) segment 4 (HA)3057.30.000000e+001687/1703 (99%)EPI596616A/duck/Vietnam/LBM759/2014 (A/H5N6) segment 4 (HA)3057.30.000000e+001687/1703 (99%)EPI596604A/muscovy duck/Vietnam/LBM757/2014 (A/H5N6) segment 4 (HA)3057.30.000000e+001687/1703 (99%)EPI586256A/Little egret/Vietnam/WBT210/2014 (A/H5N6) segment 4 (HA)3057.30.000000e+001687/1703 (99%)EPI586255A/Black-crowned night heron/Vietnam/WBT198/2014 (A/H5N6) segment 4 (HA)3057.30.000000e+001687/1703 (99%)EPI586254A/Spotted dove/Vietnam/WBT191/2014 (A/H5N6) segment 4 (HA)3057.30.000000e+001687/1703 (99%)EPI586258A/Chinese pond heron/Vietnam/WBT231/2014 (A/H5N6) segment 4 (HA)3051.80.000000e+001686/1703 (99%)EPI586257A/Common moorhen/Vietnam/WBT226/2014 (A/H5N6) segment 4 (HA)3035.20.000000e+001683/1703 (98%)EPI641396A/chicken/Yunnan/25A/2015 (A/H5N6) segment 4 (HA)2987.20.000000e+001675/1703 (98%)EPI590116A/chicken/Tonghai/802/2014 (A/H5N1) segment 4 (HA)2985.30.000000e+001675/1704 (98%)EPI590115A/chicken/Tonghai/5/2014 (A/H5N1) segment 4 (HA)2985.30.000000e+001675/1704 (98%)EPI590114A/chicken/Tonghai/3/2014 (A/H5N1) segment 4 (HA)2985.30.000000e+001675/1704 (98%)EPI590109A/chicken/AnNing/1/2014 (A/H5N1) segment 4 (HA)2985.30.000000e+001675/1704 (98%)EPI585951A/chicken/TongHai/302/2014 (A/H5N1) segment 4 (HA)2985.30.000000e+001675/1704 (98%)EPI641398A/Yunnan/0127/2015 (A/H5N6) segment 4 (HA)2981.60.000000e+001674/1703 (98%)EPI590897A/duck/Sichuan/NCXN11/2014 (A/H5N1) segment 4 (HA)2979.80.000000e+001674/1704 (98%)EPI590898A/pigeon/Sichuan/NCXN29/2014 (A/H5N1) segment 4 (HA)2974.20.000000e+001673/1704 (98%)EPI590111A/chicken/AnNing/6/2014 (A/H5N1) segment 4 (HA)2974.20.000000e+001674/1705 (98%)EPI590110A/chicken/AnNing/4/2014 (A/H5N1) segment 4 (HA)2968.70.000000e+001672/1704 (98%)EPI590896A/duck/Sichuan/NCXN10/2014 (A/H5N1) segment 4 (HA)2957.60.000000e+001671/1705 (98%)EPI590113A/chicken/DaLi/502/2014 (A/H5N1) segment 4 (HA)2946.50.000000e+001669/1705 (97%)EPI590112A/chicken/DaLi/302/2014 (A/H5N1) segment 4 (HA)2946.50.000000e+001669/1705 (97%)EPI641394A/chicken/Yunnan/22/2015 (A/H5N6) segment 4 (HA)2920.70.000000e+001664/1704 (97%)EPI475579A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA)2918.80.000000e+001664/1705 (97%)EPI593747A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA)2913.30.000000e+001662/1704 (97%)EPI442017A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA)2913.30.000000e+001662/1704 (97%)EPI641392A/chicken/Yunnan/19/2015 (A/H5N6) segment 4 (HA)2898.50.000000e+001659/1703 (97%)EPI398966A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA)2896.70.000000e+001659/1704 (97%)EPI431456A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA)2891.10.000000e+001658/1704 (97%)EPI399960A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA)2880.00.000000e+001658/1706 (97%)EPI398965A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA)2880.00.000000e+001656/1704 (97%)EPI544892A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA)2863.40.000000e+001654/1705 (97%)EPI509698A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA)2857.90.000000e+001652/1704 (96%)EPI591879A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA)2852.30.000000e+001651/1704 (96%)EPI561495A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA)2846.80.000000e+001650/1704 (96%)EPI602037A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA)2835.70.000000e+001648/1704 (96%)EPI583870A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA)2835.70.000000e+001648/1704 (96%)EPI530986A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA)2830.20.000000e+001647/1704 (96%)EPI507673A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA)2830.20.000000e+001647/1704 (96%)EPI493825A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA)2830.20.000000e+001650/1707 (96%)EPI431448A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA)2826.50.000000e+001646/1704 (96%)EPI530985A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA)2824.60.000000e+001646/1704 (96%)EPI573197A/chicken/Korea/H881/2014 (A/H5N8) segment 4 (HA)2819.10.000000e+001645/1703 (96%)EPI561612A/breeder duck/Korea/H158/2014 (A/H5N8) segment 4 (HA)2819.10.000000e+001645/1703 (96%)EPI585595A/baikal teal/Korea/2417/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI585589A/baikal teal/Korea/2399/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI585586A/baikal teal/Korea/1456/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI573242A/Common Teal/Korea/H844/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI561646A/breeder duck/Korea/H249/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI561626A/mallard/Korea/H207/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI561605A/broiler duck/Korea/H145/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI561591A/breeder duck/Korea/H128/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI561529A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI561508A/bean goose/Korea/H53/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI561341A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 4 (HA)2813.60.000000e+001644/1703 (96%)EPI585594A/baikal teal/Korea/2416/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI585592A/baikal teal/Korea/2406/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI585591A/baikal teal/Korea/2403/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI585590A/baikal teal/Korea/2402/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI585582A/baikal teal/Korea/1448/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI585581A/baikal teal/Korea/1447/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001644/1704 (96%)EPI585579A/baikal teal/Korea/1445/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI585577A/baikal teal/Korea/1437/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI573200A/Korean native chicken/Korea/H1139/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI573199A/breeder chicken/Korea/H1068/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI561674A/bean goose/Korea/H328/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI561577A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI561570A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI561563A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI561542A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI561522A/broiler duck/Korea/H65/2014 (A/H5N8) segment 4 (HA)2808.00.000000e+001643/1703 (96%)EPI493817A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA)2808.00.000000e+001647/1708 (96%)EPI585593A/baikal teal/Korea/2414/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI585587A/baikal teal/Korea/1457/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI585584A/baikal teal/Korea/1452/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI585583A/baikal teal/Korea/1449/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI561705A/bean goose/Korea/H40/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI561667A/mallard/Korea/H297/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI561653A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI561633A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI542628A/mallard/Korea/W452/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI509709A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI509704A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 4 (HA)2802.50.000000e+001642/1703 (96%)EPI499478A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA)2802.50.000000e+001642/1704 (96%)EPI585585A/baikal teal/Korea/1454/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI585580A/baikal teal/Korea/1446/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI585578A/baikal teal/Korea/1441/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI573208A/gadwall/Korea/H1351/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI573196A/broiler duck/Korea/H651/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI573194A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561697A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561681A/tundra swan/Korea/H411/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561660A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561598A/broiler duck/Korea/H133/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561515A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561360A/broiler duck/Korea/H49/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561348A/broiler duck/Korea/H47/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561336A/broiler duck/Korea/H48/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561204A/broiler duck/Korea/H31/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561196A/broiler duck/Korea/H29/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI561187A/waterfowl/Korea/S005/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI517161A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 4 (HA)2796.90.000000e+001641/1703 (96%)EPI585588A/baikal teal/Korea/1458/2014 (A/H5N8) segment 4 (HA)2791.40.000000e+001640/1703 (96%)EPI573207A/chicken/Korea/H1350/2014 (A/H5N8) segment 4 (HA)2791.40.000000e+001640/1703 (96%)EPI573201A/chicken/Korea/H1236/2014 (A/H5N8) segment 4 (HA)2791.40.000000e+001640/1703 (96%)EPI573192A/breeder chicken/Korea/H503/2014 (A/H5N8) segment 4 (HA)2791.40.000000e+001640/1703 (96%)EPI561690A/common teal/Korea/H455-30/2014 (A/H5N8) segment 4 (HA)2791.40.000000e+001640/1703 (96%)EPI561556A/Coot/Korea/H81/2014 (A/H5N8) segment 4 (HA)2791.40.000000e+001640/1703 (96%)EPI561549A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 4 (HA)2791.40.000000e+001640/1703 (96%)EPI573240A/breeder duck/Korea/H345/2014 (A/H5N8) segment 4 (HA)2785.90.000000e+001639/1703 (96%)EPI573203A/chicken/Korea/H1292/2014 (A/H5N8) segment 4 (HA)2785.90.000000e+001640/1704 (96%)EPI573202A/chicken/Korea/H1268/2014 (A/H5N8) segment 4 (HA)2785.90.000000e+001639/1703 (96%)EPI573195A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA)2785.90.000000e+001639/1703 (96%)EPI643147A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA)2782.20.000000e+001634/1705 (95%)EPI561619A/breeder duck/Korea/H200/2014 (A/H5N8) segment 4 (HA)2780.30.000000e+001638/1703 (96%)EPI573241A/breeder duck/Korea/H566/2014 (A/H5N8) segment 4 (HA)2774.80.000000e+001637/1703 (96%)EPI573204A/goose/Korea/H1296/2014 (A/H5N8) segment 4 (HA)2774.80.000000e+001637/1703 (96%)EPI328878A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA)2774.80.000000e+001640/1707 (96%)EPI573205A/Korean native chicken/Korea/H1299/2014 (A/H5N8) segment 4 (HA)2769.20.000000e+001636/1703 (96%)EPI573198A/broiler duck/Korea/H959/2014 (A/H5N8) segment 4 (HA)2769.20.000000e+001637/1704 (96%)EPI493833A/duck/Guangdong/wy24/2008 (A/H5N5) segment 4 (HA)2765.60.000000e+001642/1711 (95%)EPI573218A/Korean native chicken/Korea/H1687/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI573217A/broiler duck/Korea/H1685/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI573216A/broiler duck/Korea/H1683/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI573212A/Korean native chicken/Korea/H1554/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI573211A/goose/Korea/H1545/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI573210A/broiler duck/Korea/H1414/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI573209A/broiler duck/Korea/H1413/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI573206A/breeder duck/Korea/H1343/2014 (A/H5N8) segment 4 (HA)2763.70.000000e+001636/1704 (96%)EPI550849A/duck/England/36226/14 (A/H5N8) segment 4 (HA)2763.70.000000e+001635/1703 (96%)EPI550848A/duck/England/36038/14 (A/H5N8) segment 4 (HA)2763.70.000000e+001635/1703 (96%)EPI588968A/chicken/Taiwan/a174/2015 (A/H5N3) segment 4 (HA)2758.20.000000e+001634/1703 (95%)EPI573638A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 4 (HA)2758.20.000000e+001634/1703 (95%)EPI573219A/goose/Korea/H1689/2014 (A/H5N8) segment 4 (HA)2758.20.000000e+001635/1704 (95%)EPI573213A/broiler duck/Korea/H1556/2014 (A/H5N8) segment 4 (HA)2758.20.000000e+001635/1704 (95%)EPI553349A/wigeon/Sakha/1/2014 (A/H5N8) segment 4 (HA)2758.20.000000e+001634/1703 (95%)EPI576384A/MuteSwan/Sweden/SVA-U1503110277-SZ502/2015 (A/H5N8) segment 4 (HA)2754.50.000000e+001633/1703 (95%)EPI602094A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA)2752.60.000000e+001634/1705 (95%)EPI590895A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 4 (HA)2752.60.000000e+001634/1705 (95%)EPI590740A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 4 (HA)2752.60.000000e+001632/1702 (95%)EPI576391A/MuteSwan/Sweden/SVA-1503130141-SZ543/2015 (A/H5N8) segment 4 (HA)2752.60.000000e+001633/1703 (95%)EPI573235A/Korean native chicken/Korea/H1903/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001632/1702 (95%)EPI573233A/Korean native chicken/Korea/H1847/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001634/1704 (95%)EPI573228A/broiler duck/Korea/H1755/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001632/1702 (95%)EPI573227A/breeder duck/Korea/H1752/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001632/1702 (95%)EPI573222A/broiler duck/Korea/H1733/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001632/1702 (95%)EPI573220A/goose/Korea/H1698/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001634/1704 (95%)EPI573215A/breeder duck/Korea/H1596/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001634/1704 (95%)EPI573214A/broiler duck/Korea/H1582/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001634/1704 (95%)EPI573179A/duck/Netherlands/14015898/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001635/1706 (95%)EPI548493A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001633/1703 (95%)EPI548485A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001633/1703 (95%)EPI547678A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 4 (HA)2752.60.000000e+001633/1703 (95%)EPI547673A/duck/England/36254/14 (A/H5N8) segment 4 (HA)2752.60.000000e+001633/1703 (95%)EPI586534A/chicken/BC/FAV22/2014 (A/H5N2) segment 4 (HA)2748.90.000000e+001633/1704 (95%)EPI620408A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 4 (HA)2747.10.000000e+001631/1702 (95%)EPI595055A/common teal/Korea/KU-12/2015 (A/H5N8) segment 4 (HA)2747.10.000000e+001632/1703 (95%)EPI590891A/duck/Sichuan/NCJPL7/2014 (A/H5N6) segment 4 (HA)2747.10.000000e+001633/1705 (95%)EPI590726A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 4 (HA)2747.10.000000e+001631/1702 (95%)EPI590712A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 4 (HA)2747.10.000000e+001632/1703 (95%)EPI586550A/chicken/BC/FAV24/2014 (A/H5N2) segment 4 (HA)2747.10.000000e+001633/1704 (95%)EPI586518A/chicken/BC/FAV20/2014 (A/H5N2) segment 4 (HA)2747.10.000000e+001633/1704 (95%)EPI586509A/poultry/BC/FAV19/2014 (A/H5N2) segment 4 (HA)2747.10.000000e+001633/1704 (95%)EPI584079A/turkey/BC/FAV14/2014 (A/H5N2) segment 4 (HA)2747.10.000000e+001633/1704 (95%)EPI576477A/chicken/BC/FAV9/2014 (A/H5N2) segment 4 (HA)2747.10.000000e+001631/1702 (95%)EPI573298A/turkey/BC/FAV10/2014 (A/H5N2) segment 4 (HA)2747.10.000000e+001633/1704 (95%)EPI573239A/mallard/Korea/H1924-6/2014 (A/H5N8) segment 4 (HA)2747.10.000000e+001632/1703 (95%)EPI573229A/broiler duck/Korea/H1763/2014 (A/H5N8) segment 4 (HA)2747.10.000000e+001631/1702 (95%)EPI573226A/Korean native chicken/Korea/H1747/2014 (A/H5N8) segment 4 (HA)2747.10.000000e+001633/1704 (95%)EPI573224A/broiler duck/Korea/H1739/2014 (A/H5N8) segment 4 (HA)2747.10.000000e+001631/1702 (95%)EPI573171A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 4 (HA)2747.10.000000e+001634/1706 (95%)EPI569383A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 4 (HA)2747.10.000000e+001633/1704 (95%)EPI548623A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 4 (HA)2747.10.000000e+001632/1703 (95%)EPI602113A/environment/Jiangxi/10170/2014 (A/H5N6) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI601997A/black chicken/Jiangxi/10139/2014 (A/H0) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI599369A/environment/Jiangxi/10171/2014 (A/H5N6) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI599360A/environment/Jiangxi/10164/2014 (A/H5N6) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI599353A/duck/Jiangxi/10160/2014 (A/H5N6) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI590889A/Anas_crecca/Hubei/Chenhu1623-5/2014 (A/H5N6) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI590733A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI590719A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI590685A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 4 (HA)2741.50.000000e+001630/1702 (95%)EPI588976A/duck/Taiwan/a068/2015 (A/H5N8) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI588960A/duck/Taiwan/a043/2015 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI586542A/chicken/BC/FAV23/2014 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI586526A/chicken/BC/FAV21/2014 (A/H5N2) segment 4 (HA)2741.50.000000e+001633/1705 (95%)EPI586493A/poultry/BC/FAV15/2014 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI585724A/cat/Sichuan/SC18/2014 (A/H5N6) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI585092A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI576470A/chicken/BC/FAV8/2014 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI573271A/chicken/Washington/61-9/2014 (A/H5N2) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI573231A/broiler duck/Korea/H1839/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001630/1702 (95%)EPI573225A/broiler duck/Korea/H1745/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001630/1702 (95%)EPI573223A/broiler duck/Korea/H1734/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001630/1702 (95%)EPI573221A/broiler duck/Korea/H1731/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001630/1702 (95%)EPI569390A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI569376A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI569372A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001632/1704 (95%)EPI553362A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001631/1703 (95%)EPI553343A/chicken/Miyazaki/7/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001631/1703 (95%)EPI552746A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 4 (HA)2741.50.000000e+001631/1703 (95%)EPI533583A/Sichuan/26221/2014 (A/H5N6) segment 4 (HA)2741.50.000000e+001632/1705 (95%)EPI328870A/duck/Eastern China/008/2008 (A/H5N5) segment 4 (HA)2741.50.000000e+001635/1708 (95%)EPI620422A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 4 (HA)2736.00.000000e+001630/1703 (95%)EPI602107A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 4 (HA)2736.00.000000e+001631/1705 (95%)EPI601986A/black chicken/Jiangxi/10136/2014 (A/H0) segment 4 (HA)2736.00.000000e+001631/1705 (95%)EPI601977A/black chicken/Jiangxi/10131/2014 (A/H0) segment 4 (HA)2736.00.000000e+001631/1705 (95%)EPI599306A/chicken/Shenzhen/1845/2013 (A/H5N6) segment 4 (HA)2736.00.000000e+001631/1705 (95%)EPI593753A/goose/Yangzhou/ZG62/2011 (A/H5N5) segment 4 (HA)2736.00.000000e+001634/1708 (95%)

  21. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman replied to niman's topic in Dr. Niman's Corner
    LOCUS KT313418 1704 bp cRNA linear VRL 08-SEP-2015 DEFINITION Influenza A virus (A/swine/Guangdong/1/2014(H5N6)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT313418 VERSION KT313418.1 GI:914296969 KEYWORDS . SOURCE Influenza A virus (A/swine/Guangdong/1/2014(H5N6)) ORGANISM Influenza A virus (A/swine/Guangdong/1/2014(H5N6)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1704) AUTHORS Li,X., Fu,Y., Yang,J., Guo,J., He,J., Guo,J., Weng,S., Jia,Y., Liu,B., Li,X., Zhu,Q. and Chen,H. TITLE Genetic and biological characterization of two novel reassortant H5N6 swine influenza viruses in mice and chickens JOURNAL Infect. Genet. Evol. (2015) In press PUBMED 26296602 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1704) AUTHORS Li,X., Fu,Y., Yang,J., Guo,J., He,J., Guo,J., Weng,S., Jia,Y., Liu,B., Li,X., Zhu,Q. and Chen,H. TITLE Direct Submission JOURNAL Submitted (20-JUL-2015) State Key Laboratory of Veterinary Etiological Biology, Lanzhou Veterinary Research Institute, Xujiaping, Lanzhou, Gansu 730046, China COMMENT GenBank Accession Numbers KT313403-KT313409, KT313418 represent sequences from the 8 segments of Influenza A virus (A/swine/Guangdong/1/2014(H5N6)). ##Assembly-Data-START## Assembly Method :: DNAstar v. 7 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1704 /organism="Influenza A virus (A/swine/Guangdong/1/2014(H5N6))" /mol_type="viral cRNA" /strain="A/swine/Guangdong/1/2014" /serotype="H5N6" /host="swine" /db_xref="taxon:1686327" /segment="4" /country="China" /collection_date="18-Jun-2014" /note="passage details: E1" gene 1..1704 /gene="HA" CDS 1..1704 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="AKV57817.1" /db_xref="GI:914296970" /translation="MEKIVLLLAVVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGRLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPV NDLCYPGNLNDYEELKHLLSRINHFEKTLIIPKSSWPNHETSLGVSAACPYQGMPSFF RNVVWLTKKNDAYPTIKMSYNNTNREDLLILWGIHHSNNAAEQTNLYKNPTTYVSVGT STLNQRLVPKIATRSQVNGQRGRMDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKG DSTIMKSEMEYGHCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLR NSPLRERRRKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADRESTQKAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYS EEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIIVAGLSLWMCSNGSLQCRIC I" sig_peptide 1..48 /gene="HA" mat_peptide 49..1035 /gene="HA" /product="HA1" mat_peptide 1036..1701 /gene="HA" /product="HA2" ORIGIN 1 atggagaaaa tagtgcttct tcttgcagtg gttagccttg ttaaaagtga tcagatttgc 61 attggttacc atgcaaacaa ctcgacagag caggttgaca cgataatgga aaaaaacgtc 121 actgttacac atgcccaaga catactggaa aagacacaca acgggaggct ctgcgatctg 181 aatggagtga aacctctgat tttaaaggat tgtagtgtag ctggatggct tcttggaaac 241 ccaatgtgcg acgagttcat cagagtgccg gaatggtctt acatagtgga gagggctaac 301 ccagtcaatg acctctgtta cccagggaac ctcaatgact atgaagaatt gaaacaccta 361 ttgagcagaa taaatcattt tgagaagact ctgatcatcc ccaagagttc ttggcccaat 421 catgaaacat cattaggggt gagcgcagca tgtccatacc agggaatgcc ctcctttttc 481 agaaatgtgg tatggcttac caagaagaac gatgcatacc caacaataaa gatgagctac 541 aataatacca atagggaaga tcttttgata ctgtggggga ttcatcattc caacaatgca 601 gcagagcaga caaatctcta taaaaaccca accacctatg tttccgttgg gacatcaaca 661 ttaaaccaga gattggtgcc aaaaatagct actagatccc aagtaaacgg gcaacgtgga 721 aggatggatt tcttctggac aattttaaaa ccgaatgatg caatccactt cgagagtaat 781 ggaaatttta ttgctccaga atatgcatac aaaattgtca agaaagggga ctcaacaatt 841 atgaaaagtg aaatggaata tggccactgc aacaccaaat gtcaaactcc aataggggcg 901 ataaactcta gtatgccatt ccacaatata caccctctca ctatcgggga gtgccccaaa 961 tacgtgaaat caaacaaatt agtccttgcg actgggctca gaaatagtcc tctaagagaa 1021 agaagaagaa aaagaggact atttggagct atagcagggt ttatagaggg aggatggcaa 1081 ggaatggtag atggttggta tgggtaccac catagcaatg aacaggggag tgggtacgct 1141 gcagacagag aatccaccca aaaggcaata gatggagtta ccaataaggt caactcgatc 1201 attgacaaaa tgaacactca atttgaggcc gttggaaggg aatttaataa cttagaacgg 1261 agaatagaga atttaaataa gaaaatggaa gacggattcc tagatgtctg gacttataat 1321 gctgaacttc tagttctcat ggaaaatgag agaactctag atttccatga ctcaaatgtc 1381 aagaaccttt atgacaaagt ccgactacag cttagggata atgcaaagga gctgggtaat 1441 ggttgtttcg agttctatca caaatgtgat aatgaatgta tggaaagtgt aagaaatggg 1501 acgtatgact acccccagta ttcagaagaa gcaagattaa aaagggaaga aataagcgga 1561 gtgaaattgg aatcaatagg aacttaccaa atactgtcaa tttattcaac agtggcgagt 1621 tccctagcac tggcaatcat tgtggctggt ctatctttat ggatgtgctc caatgggtcg 1681 ttacaatgca gaatttgcat ttag

  22. Guangdong Swine H5N6 Matches Human Clade 2.3.4.4 Guangzhou Case

    niman posted a topic in Dr. Niman's Corner
    2014 Guangdong swine sequences are closely related to human Guangzhou case.

  23. APHIS Avian Influenza Fall 2015 Plans

    niman replied to niman's topic in Avian Flu
    Last Modified: Sep 18, 2015 PrintContacts: Lyndsay Cole (970) 494-7410 [email protected] Andrea McNally (202) 799-7033 [email protected] WASHINGTON, Sept, 18, 2015----The U.S. Department of Agriculture’s Animal and Plant Health Inspection Service (APHIS) today issued a report on planning and preparations for highly pathogenic avian influenza (HPAI) in advance of a potential recurrence of the disease when birds migrate south this fall. The HPAI outbreak that devastated poultry producers during the winter and spring of 2015 was the worst animal disease in U.S. history. It affected more than 48.8 million birds and 21 States before the final detection on June 17. The incredible scope of this outbreak presented many challenges to Federal, state and industry resources and clearly identified areas where greater coordination, preparation and communication were needed. While response operations continue in the Midwest, APHIS and its partners have used the time since the last positive detection to plan for the return of the disease, using a hypothetical worst case scenario in an effort to prepare. APHIS’ planning activities incorporated our experience from this year’s response effort, our epidemiologic studies, and extensive feedback and input gathered from State partners, industry, academia and other stakeholders. The Fall 2015 HPAI Influenza Preparedness and Response Plan captures the results of this planning effort, organizing information on preparatory activities, policy decisions and updated strategy documents into four key areas: preventing or reducing future outbreaks;enhancing preparedness;improving and streamlining response capabilities; and,preparing for the potential use of AI vaccines. The report includes an updated biosecurity self-assessment for the poultry industry, streamlined and updated procedures for providing indemnity and other payments, a draft vaccine use strategy and many other items of interest to the Agency’s stakeholders. A copy of the Fall 2015 HPAI Influenza Preparedness and Response Plan andsupporting documents are available on the APHIS website at https://www.aphis.usda.gov/animal-health/aiupdates. APHIS is keenly aware of the significant impact the spring outbreak has had on all parties—poultry producers, allied industries, federal and state governments, and the American consumer. As we near the beginning of the fall season, APHIS is confident that its surveillance programs in commercial and wild birds, which are the strongest in the world, will enable us to detect the disease early. APHIS’ advanced planning and the preparations undertaken by the States and the poultry industry will help quickly contain the disease. If HPAI should reappear in the coming months, APHIS is ready to respond and committed to helping those affected by the disease. https://www.aphis.usda.gov/wps/portal/aphis/home/!ut/p/a1/04_Sj9CPykssy0xPLMnMz0vMAfGjzOK9_D2MDJ0MjDz9vT3NDDz9woIMnDxcDA2CjYEKIoEKDHAARwNC-sP1o8BKnN0dPUzMfYB6TCyMDDxdgPLmlr4GBp5mUAV4rCjIjTDIdFRUBADp5_lR/?1dmy&urile=wcm%3apath%3a%2Faphis_content_library%2Fsa_newsroom%2Fsa_news%2Fsa_by_date%2Fsa_2015%2Fsa_09%2Fct_hpai_fall_plan

  24. APHIS Avian Influenza Fall 2015 Plans

    niman posted a topic in Avian Flu
    APHIS issued plans for fall 2015 activities regarding avian influenza in the United States.

  25. 2015 Thailand MERS Import Matches South Korea / China

    niman replied to niman's topic in Dr. Niman's Corner
    AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KT225476.2|Middle East respiratory syndrome coronavirus isolate MERS-CoV/THA/CU/17_06_2015, complete genome5375753757100%0.0100%KT225476.2Select seq gb|KT026454.1|Middle East respiratory syndrome coronavirus strain Hu/Riyadh_KSA_4050_2015, complete genome5360453604100%0.099%KT026454.1Select seq gb|KT026456.1|Middle East respiratory syndrome coronavirus isolate Hu/Riyadh_KSA_4050_2015, complete genome5358453584100%0.099%KT026456.1Select seq gb|KT006149.2|Middle East respiratory syndrome coronavirus strain ChinaGD01, complete genome5357753577100%0.099%KT006149.2Select seq gb|KT029139.1|Middle East respiratory syndrome coronavirus isolate MERS-CoV/KOR/KNIH/002_05_2015, complete genome5357253572100%0.099%KT029139.1Select seq gb|KT026453.1|Middle East respiratory syndrome coronavirus strain Hu/Riyadh_KSA_2959_2015, complete genome5356653566100%0.099%KT026453.1Select seq gb|KF600628.1|Middle East respiratory syndrome coronavirus isolate Hafr-Al-Batin_1_2013, complete genome5347853478100%0.099%KF600628.1Select seq gb|KJ650098.1|Middle East respiratory syndrome coronavirus isolate Camel/Qatar_2_2014, complete genome5343653436100%0.099%KJ650098.1Select seq gb|KF961222.1|Middle East respiratory syndrome coronavirus isolate Qatar4, complete genome534275342799%0.099%KF961222.1Select seq gb|KJ829365.1|Middle East respiratory syndrome coronavirus strain Florida/USA-2_Saudi Arabia_2014, complete genome5342453424100%0.099%KJ829365.1Select seq gb|KP223131.1|Middle East respiratory syndrome coronavirus isolate Florida/USA-2_Saudi Arabia_2014, complete genome5341553415100%0.099%KP223131.1Select seq gb|KJ713295.1|Middle East respiratory syndrome coronavirus isolate KSA-CAMEL-505, complete genome5340953409100%0.099%KJ713295.1Select seq gb|KJ713296.1|Middle East respiratory syndrome coronavirus isolate KSA-CAMEL-378, complete genome5340053400100%0.099%KJ713296.1Select seq gb|KF961221.1|Middle East respiratory syndrome coronavirus isolate Qatar3, complete genome533995339999%0.099%KF961221.1Select seq gb|KC164505.2|Betacoronavirus England 1, complete genome5338853388100%0.099%KC164505.2Select seq gb|KC667074.1|Human betacoronavirus 2c England-Qatar/2012, complete genome5338853388100%0.099%KC667074.1Select seq gb|KM027256.1|Middle East respiratory syndrome coronavirus isolate Jeddah_C7569/KSA/2014-04-03, complete genome533715337199%0.099%KM027256.1Select seq gb|KJ713297.1|Middle East respiratory syndrome coronavirus isolate KSA-CAMEL-503, complete genome5337053370100%0.099%KJ713297.1Select seq gb|KM027261.1|Middle East respiratory syndrome coronavirus isolate Makkah_C9355/KSA/Makkah/2014-04-15, complete genome533685336899%0.099%KM027261.1Select seq gb|KM027259.1|Middle East respiratory syndrome coronavirus isolate Jeddah_C9055/KSA/2014-04-14, complete genome533685336899%0.099%KM027259.1Select seq gb|KM027255.1|Middle East respiratory syndrome coronavirus isolate Jeddah_C7149/KSA/2014-04-05, complete genome533685336899%0.099%KM027255.1Select seq gb|KF192507.1|Middle East respiratory syndrome coronavirus, complete genome5336453364100%0.099%KF192507.1Select seq gb|KM027258.1|Middle East respiratory syndrome coronavirus isolate Jeddah_C8826/KSA/2014-04-12, complete genome533625336299%0.099%KM027258.1Select seq gb|KJ156934.1|Middle East respiratory syndrome coronavirus isolate Riyadh_14_2013, complete genome533535335399%0.099%KJ156934.1Select seq gb|KJ813439.1|Middle East respiratory syndrome coronavirus strain Indiana/USA-1_Saudi Arabia_2014, complete genome5334653346100%0.099%KJ813439.1Select seq gb|KF600652.1|Middle East respiratory syndrome coronavirus isolate Riyadh_2_2012, complete genome533465334699%0.099%KF600652.1Select seq gb|KF600651.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_18_2013, complete genome5334653346100%0.099%KF600651.1Select seq gb|KF186567.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_1_2013, complete genome5334653346100%0.099%KF186567.1Select seq gb|KT036372.1|Middle East respiratory syndrome coronavirus isolate ChinaGD01, partial genome533415334199%0.099%KT036372.1Select seq gb|KF186566.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_2_2013, complete genome5333953339100%0.099%KF186566.1Select seq gb|KM027257.1|Middle East respiratory syndrome coronavirus isolate Jeddah_C7770/KSA/2014-04-07, complete genome533375333799%0.099%KM027257.1Select seq gb|KJ713298.1|Middle East respiratory syndrome coronavirus isolate KSA-CAMEL-363, complete genome5333753337100%0.099%KJ713298.1Select seq gb|KF917527.1|Middle East respiratory syndrome coronavirus isolate MERS-CoV-Jeddah-Camel-1, complete genome5333753337100%0.099%KF917527.1Select seq gb|KF600647.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_17_2013, complete genome5332853328100%0.099%KF600647.1Select seq gb|KF600632.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_19_2013, complete genome533285332899%0.099%KF600632.1Select seq gb|KM015348.1|Middle East respiratory syndrome coronavirus isolate England/2/2013, complete genome533215332199%0.099%KM015348.1Select seq gb|KR011266.1|Middle East respiratory syndrome coronavirus strain Hu/Riyadh-KSA-2049/2015, complete genome533175331799%0.099%KR011266.1Select seq gb|KR011264.1|Middle East respiratory syndrome coronavirus strain Hu/Riyadh-KSA-2343/2015, complete genome533175331799%0.099%KR011264.1Select seq gb|KR011263.1|Middle East respiratory syndrome coronavirus strain Hu/Riyadh-KSA-2345/2015, complete genome533175331799%0.099%KR011263.1Select seq gb|KR011265.1|Middle East respiratory syndrome coronavirus strain Hu/Riyadh-KSA-2466/2015, complete genome533165331699%0.099%KR011265.1Select seq gb|KJ713299.1|Middle East respiratory syndrome coronavirus isolate KSA-CAMEL-376, complete genome5331653316100%0.099%KJ713299.1Select seq gb|KJ156910.1|Middle East respiratory syndrome coronavirus isolate Hafr-Al-Batin_2_2013, complete genome533145331499%0.099%KJ156910.1Select seq gb|KJ156874.1|Middle East respiratory syndrome coronavirus isolate Hafr-Al-Batin_6_2013, complete genome533125331299%0.099%KJ156874.1Select seq gb|KF600630.1|Middle East respiratory syndrome coronavirus isolate Buraidah_1_2013, complete genome533105331099%0.099%KF600630.1Select seq gb|KT156560.1|Middle East respiratory syndrome coronavirus strain Hu/Oman_2285_2013, complete genome5330753307100%0.099%KT156560.1Select seq gb|KM210278.1|Middle East respiratory syndrome coronavirus isolate England/3/2013, complete genome533055330599%0.099%KM210278.1Select seq gb|KJ650297.1|Middle East respiratory syndrome coronavirus isolate KFU-HKU 1, complete genome5330153301100%0.099%KJ650297.1Select seq gb|KP209312.1|Middle East respiratory syndrome coronavirus strain Abu Dhabi_UAE_9_2013, complete genome5329853298100%0.099%KP209312.1Select seq gb|KM210277.1|Middle East respiratory syndrome coronavirus isolate England/4/2013, complete genome532945329499%0.099%KM210277.1Select seq gb|KP209306.1|Middle East respiratory syndrome coronavirus strain Abu Dhabi_UAE_8_2014, complete genome5329453294100%0.099%KP209306.1Select seq gb|KP209309.1|Middle East respiratory syndrome coronavirus strain Abu Dhabi_UAE_30_2014, complete genome5329253292100%0.099%KP209309.1Select seq gb|KJ156952.1|Middle East respiratory syndrome coronavirus isolate Riyadh_4_2013, complete genome532925329299%0.099%KJ156952.1Select seq gb|KJ650296.1|Middle East respiratory syndrome coronavirus isolate KFU-HKU 19Dam, complete genome532905329099%0.099%KJ650296.1Select seq gb|KJ650295.1|Middle East respiratory syndrome coronavirus isolate KFU-HKU 13, complete genome532905329099%0.099%KJ650295.1Select seq gb|KP209313.1|Middle East respiratory syndrome coronavirus strain Abu Dhabi_UAE_26_2014, complete genome5328953289100%0.099%KP209313.1Select seq gb|KF186564.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_4_2013, complete genome532895328999%0.099%KF186564.1Select seq gb|KP209308.1|Middle East respiratory syndrome coronavirus strain Abu Dhabi_UAE_16_2014, complete genome5328553285100%0.099%KP209308.1Select seq gb|KP209307.1|Middle East respiratory syndrome coronavirus strain Abu Dhabi_UAE_18_2014, complete genome5328353283100%0.099%KP209307.1Select seq gb|KF600627.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_12_2013, complete genome532835328399%0.099%KF600627.1Select seq gb|KP209310.1|Middle East respiratory syndrome coronavirus strain Abu Dhabi/Gayathi_UAE_2_2014, complete genome5327453274100%0.099%KP209310.1Select seq gb|KF600644.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_16_2013, complete genome532725327299%0.099%KF600644.1Select seq gb|KF600634.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_21_2013, complete genome532725327299%0.099%KF600634.1Select seq gb|KT156561.1|Middle East respiratory syndrome coronavirus strain Hu/Oman_2874_2013, complete genome5327053270100%0.099%KT156561.1Select seq gb|KJ156944.1|Middle East respiratory syndrome coronavirus isolate Riyadh_5_2013, complete genome532705327099%0.099%KJ156944.1Select seq gb|KF600645.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_15_2013, complete genome532695326999%0.099%KF600645.1Select seq gb|KF186565.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_3_2013, complete genome532695326999%0.099%KF186565.1Select seq gb|KJ156881.1|Middle East respiratory syndrome coronavirus isolate Wadi-Ad-Dawasir_1_2013, complete genome532655326599%0.099%KJ156881.1Select seq gb|KF600613.1|Middle East respiratory syndrome coronavirus isolate Riyadh_3_2013, complete genome532635326399%0.099%KF600613.1Select seq gb|KJ156949.1|Middle East respiratory syndrome coronavirus isolate Taif_1_2013, complete genome532615326199%0.099%KJ156949.1Select seq gb|KJ156866.1|Middle East respiratory syndrome coronavirus isolate Al-Hasa_25_2013, complete genome532565325699%0.099%KJ156866.1Select seq gb|KF600612.1|Middle East respiratory syndrome coronavirus isolate Riyadh_1_2012, complete genome532515325199%0.099%KF600612.1Select seq gb|KJ156869.1|Middle East respiratory syndrome coronavirus isolate Riyadh_9_2013, complete genome532455324599%0.099%KJ156869.1Select seq gb|KJ361503.1|Middle East respiratory syndrome coronavirus isolate Hu-France - FRA2_130569-2013_Isolate_Sanger, complete genome532405324099%0.099%KJ361503.1Select seq gb|KM027260.1|Middle East respiratory syndrome coronavirus isolate Jeddah_C10306/KSA/2014-04-20, complete genome532385323899%0.099%KM027260.1Select seq gb|KF600620.1|Middle East respiratory syndrome coronavirus isolate Bisha_1_2012, complete genome532245322499%0.099%KF600620.1Select seq gb|JX869059.2|Human betacoronavirus 2c EMC/2012, complete genome5314853148100%0.099%JX869059.2Select seq gb|KM027262.1|Middle East respiratory syndrome coronavirus isolate Riyadh_2014KSA_683/KSA/2014, complete genome531445314499%0.099%KM027262.1Select seq gb|KJ614529.1|Human betacoronavirus 2c Jordan-N3/2012 isolate MG167, complete genome531015310199%0.099%KJ614529.1Select seq gb|KF745068.1|Middle East respiratory syndrome coronavirus isolate FRA/UAE, complete genome530995309999%0.099%KF745068.1Select seq gb|KC776174.1|Human betacoronavirus 2c Jordan-N3/2012, complete genome530475304799%0.099%KC776174.1Select seq gb|KJ556336.1|Middle East respiratory syndrome coronavirus isolate Jeddah_1_2013, complete genome529735297399%0.099%KJ556336.1Select seq gb|KJ361501.1|Middle East respiratory syndrome coronavirus isolate Hu-France - FRA2_130569-2013_IS_HTS, complete genome529685296899%0.099%KJ361501.1Select seq gb|KP719933.1|Middle East respiratory syndrome coronavirus isolate Camel/UAE/D1209/2014, complete genome528165281699%0.099%KP719933.1Select seq gb|KP719931.1|Middle East respiratory syndrome coronavirus isolate Camel/UAE/D1339.2/2014, complete genome528075280799%0.099%KP719931.1Select seq gb|KP719932.1|Middle East respiratory syndrome coronavirus isolate Camel/UAE/D1243.12/2014, complete genome528025280299%0.099%KP719932.1Select seq gb|KP719930.1|Middle East respiratory syndrome coronavirus isolate Camel/UAE/D1164.14/2014, complete genome527935279399%0.099%KP719930.1Select seq gb|KP719928.1|Middle East respiratory syndrome coronavirus isolate Camel/UAE/D1164.10/2014, complete genome527895278999%0.099%KP719928.1Select seq gb|KP719927.1|Middle East respiratory syndrome coronavirus isolate Camel/UAE/D1164.9/2014, complete genome527895278999%0.099%KP719927.1Select seq gb|KP719929.1|Middle East respiratory syndrome coronavirus isolate Camel/UAE/D1164.11/2014, complete genome527825278299%0.099%KP719929.1Select seq gb|KJ477102.1|Middle East respiratory syndrome coronavirus, complete genome527605276099%0.099%KJ477102.1Select seq gb|KJ361500.1|Middle East respiratory syndrome coronavirus isolate Hu-France (UAE) - FRA1_1627-2013_BAL_Sanger, complete genome523585235898%0.099%KJ361500.1Select seq gb|KJ156916.1|Middle East respiratory syndrome coronavirus isolate Madinah_3b_2013, partial genome496104961092%0.099%KJ156916.1Select seq gb|KJ156942.1|Middle East respiratory syndrome coronavirus isolate Riyadh_8b_2013, partial genome490274902791%0.099%KJ156942.1Select seq gb|KT036374.1|Middle East respiratory syndrome coronavirus isolate ChinaGD01 variant 2, partial genome487555260698%0.099%KT036374.1Select seq gb|KT036373.1|Middle East respiratory syndrome coronavirus isolate ChinaGD01 variant 1, partial genome487465259498%0.099%KT036373.1Select seq gb|KJ361499.1|Middle East respiratory syndrome coronavirus isolate Hu-France (UAE) - FRA1_1627-2013_BAL_HTS, partial genome459255129596%0.099%KJ361499.1Select seq gb|KJ361502.1|Middle East respiratory syndrome coronavirus isolate Hu-France - FRA2_130569-2013_InSpu_Sanger, complete genome417495301099%0.099%KJ361502.1Select seq gb|KJ156937.1|Middle East respiratory syndrome coronavirus isolate Riyadh_7a_2013 ORF1ab gene, partial cds; and ORF1a gene, complete cds346003460064%0.099%KJ156937.1Select seq gb|KJ156891.1|Middle East respiratory syndrome coronavirus isolate Riyadh_10a_2013 ORF1ab gene, partial cds; and ORF1a gene, complete cds344043440464%0.099%KJ156891.1Select seq gb|KJ156946.1|Middle East respiratory syndrome coronavirus isolate Riyadh_11a_2013 ORF1ab gene, partial cds; and ORF1a gene, complete cds343693436964%0.099%KJ156946.1

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