Sequences (COVID)

The University of the West Indies has released (at GISAID) a UK variant B1.1.1.7 sequence, Jamaica/JAM47542/2020, collected Dec 21.

Hospital General Universitario Gregorio Marañón has released (at GISAID) 3 UK Variant B.1.1.7 COVID sequences (Spain/MD-5148742/2020, Spain/MD-20510356/2020, Spain/MD-20516404/2020 from collections between Dec 21-23 in Madrid.

UCSF has released (at GISAID) two UK Variant, B.1.1.7, COVID sequences, USA/CA-CDPH-UC301/2020 & USA/CA-CDPH-UC302/2020 collected Dec 20 in San Bernardino County.

ESR has released (at GISAID) a 3 UK Variant, B.1.1.7, COVID sequences, (New Zealand/20CV0692/2020, New Zealand/20CV0695/2020, New Zealand/20CV0703/2020) from a Dec 19-27 collections

ESR has released (at GISAID) a UK Variant, B.1.1.7, COVID sequence, New Zealand/20CV0687/2020 from a Dec 10 collection from a female.

ESR has released (at GISAID) a UK Variant, B.1.1.7, COVID sequence, New Zealand/20CV0680/2020, collected from a male on Dec 19 in Counties Manukau

Microbial Genomics Platform has released (at GISAID) a UK Variant, B.1.1.7, COVID sequence, Luxembourg/LNS2043044/2020, collected on Dec 24 from 56F.

CAST has released (at GISAID) a UK Variant, B.1.1.7, COVID sequence, Italy/ABR-CAST-CL106/2020, collected Dec 27 in Abruzzo, which has the Spike non-synonymous changes, but is missing the Spike and NSP 6 deletions.

CDC has released (at GISAID), 3 UK variant, B.1.1.7, sequences (USA/CA-CDC-STM-P017/2020, USA/CA-CDC-STM-P019/2020, USA/CA-CDC-STM-P025/2020 collected between Dec 20-21 from 3 males in San Diego Co

CDC has released (at GISAID) a UK variant, B.1.1.7, sequence, USA/FL-CDC-STM-P012/2020, collected Dec 19 from a 23M in Martin County

Instituto de Medicina Tropical de Sao Paulo has released (at GISAID), two UK Variant COVID sequences (Brazil/SP-L67-CD1713/2020 & Brazil/SP-L67-CD1714/2020) from Dec 22 and 21 collections.

Institut Pasteur, Paris has released (at GISAID) a UK Variant COVID sequence, France/HDF-IPP11311/2020, from a Dec 21 collection in Amiens.

Albertsen Lab has released (at GISAID) a UK Variant COVID sequence, Denmark/DCGC-17723/2020, sans Spike Y145del from Nordjylland Denmark.

Albertsen Lab has released (at GISAID) three more UK variant COVID sequences (Denmark/DCGC-18078/2020, Denmark/DCGC-18425/2020, Denmark/DCGC-18568/2020) collected between Dec 7-14 in Hovedstaden.

Charité Universitätsmedizin Berlin, Institut für Virologie has released (at GISAID) a UK variant COVID sequence, Germany/DE-BW-ChVir21528/2020, collected on Dec 21 in Baden-Wuerttemberg.

SA Pathology has released (at GISAID) another UK variant COVID sequence, Australia/SAP595/2020, collected on Dec 26 from 33M in South Australia.

National Centre for Infectious Diseases has released (at GISAID) four more UK Variant sequences (Singapore/1468/2020, Singapore/1489/2020, Singapore/1467/2020, Singapore/1466/2020) from Singapore.

Aalborg University released (at GISAID) 14 UK Variant COVID sequences (Denmark/DCGC-18821/2020, Denmark/DCGC-18854/2020, Denmark/DCGC-20161/2020, Denmark/DCGC-18316/2020, Denmark/DCGC-18471/2020, Denmark/DCGC-18515/2020, Denmark/DCGC-18545/2020, Denmark/DCGC-18748/2020, Denmark/DCGC-17034/2020, Denmark/DCGC-17084/2020, Denmark/DCGC-17344/2020, Denmark/DCGC-17416/2020, Denmark/DCGC-17442/2020, Denmark/DCGC-17451/2020) collected between Dec 7-14 in Nordjylland.

Robert Koch Institute has released 9at GISAID a UK Variant COVID sequence, Germany/NW-RKI-I-0026/2020, collected Dec 7.

Colorado Department of Public Health & Environment has released (at GISAID) a UK variant COVID sequence, USA/CO-CDPHE-2100156850/2020 collected Dec 24

Public Health Ontario Laboratory has released (at GISAID) 3 UK Variant COVID sequences from Ontario (Canada/ON-PHL-20-04108/2020, Canada/ON-PHL-20-04109/2020, Canada/ON-PHL-20-04116/2020) which were collected in Dec and have two of the three Spike gene deletions.

Aalborg University has released (at GISAID) a UK variant COVID sequence sans Spike deletions, Denmark/DCGC-17262/2020, collected Dec 14 in Syddanmark.

Aalborg University has released (at GISAID) two more UK variant COVID sequences (Denmark/DCGC-17002/2020 & Denmark/DCGC-17226/2020) from Dec 14 collections in Syddanmark.

University Hospital Zürich has released (at GISAID) a UK variant COVID sequence from a Dec 18 collected from 26M

Aalborg University released (at GISAID) two UK Variant COVID sequences (Denmark/DCGC-18154/2020 & Denmark/DCGC-17567/2020) collected Dec 14.