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Pandemic Potentials Blog

Sequences (COVID)

  1. COG-UK has released (at GISAID) 501.v2 SARS-CoV2 COVID sequence (England/MILK-C90388/2020) from Milton Keynes England collected Dec 10.

    • 1 reply
    • 209 views
  2. COG-UK has released (at GISAID) 501.v2 SARS-CoV2 COVID sequence (England/ALDP-C8FEC7/2020) from Alderley Park England collected Dec 11.

    • 1 reply
    • 223 views
  3. COG-UK has released (at GISAID) two 501.v2 SARS-CoV2 COVID sequences (England/ALDP-C690AF/2020 & England/ALDP-C8E7FA/2020) from Alderley Park England collected between Dec 14-15.

    • 2 replies
    • 230 views
  4. Grubaugh Lab - Yale School of Public Health has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (USA/CT-Yale-S019/2021, USA/CT-Yale-S019/2021 collected between Jan 2-4..

    • 2 replies
    • 258 views
  5. Irish Coronavirus Sequencing Consortium-Teagasc Grange has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (Ireland/WX-NVRL-AIIDW005v1/2020, Ireland/WX-NVRL-AIIDW008v1/2020) collected Dec 17-21

    • 2 replies
    • 244 views
  6. Irish Coronavirus Sequencing Consortium-Teagasc Grange has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (Ireland/D-NVRL-AIIDV1374v1/2020, Ireland/D-NVRL-AIIDV1374v2/2020) collected Dec 21

    • 2 replies
    • 233 views
  7. Andersen lab at Scripps Research has released (at GISAID) a UK COVID Variant sequence, USA/CA-SEARCH-5574/2020

    • 2 replies
    • 298 views
  8. The Public Health Agency of Sweden has released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequence (Sweden/20-13052/2020 12/30) from Stockholm Sweden collected Dec 30.

    • 1 reply
    • 191 views
  9. Norwegian Institute of Public Health has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (Norway/7110/2020 12/22 & Norway/7116/2020 12/22 collected Dec 22.

    • 2 replies
    • 215 views
  10. Norwegian Institute of Public Health has released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequences (Norway/7136/2020 12/15) collected Dec 15.

    • 1 reply
    • 180 views
  11. Prince of Wales Hospital has released (at GISAID) three501.v2 SARS-CoV2 COVID Sequences (Australia/NSW3872/2021, Australia/NSW3876/2021) collected between Jan 1.

    • 2 replies
    • 252 views
  12. SA Pathology has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (Australia/SAP602/2020, Australia/SAP605/2021) collected between Dec 31 - Jan 4.

    • 2 replies
    • 290 views
  13. Microbial Genomics Platform has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (Luxembourg/LNS7581211/2020, 6/2020) collected between Dec 28-29.

    • 2 replies
    • 226 views
  14. Botswana Institute for Technology Research and Innovation released (at GISAID) three 501.v2 SARS-CoV2 sequences, ( Botswana/1217-IN1660/2020, Botswana/1217-IN1699/2020, Botswana/1223-IN1490/2020) collected Dec 17-23

    • 3 replies
    • 333 views
  15. Botswana Institute for Technology Research and Innovation released (at GISAID) two 501.v2 SARS-CoV2 sequences, Botswana/CV1605828/2020 & Botswana/CV1615722/2020, collected Dec 23-28

    • 2 replies
    • 261 views
  16. Botswana Institute for Technology Research and Innovation released (at GISAID) a 501.v2 SARS-CoV2 sequence, Botswana/1224-IN462/2020, collected Dec 24 from 30M

    • 1 reply
    • 169 views
  17. Microbial Genomics Platform has released (at GISAID) three UK Variant B.1.1.7 SARS CoV2 sequences (Luxembourg/LNS4604656/2020, Luxembourg/LNS2043044/2020, Luxembourg/LNS7581211/2020) collected between Dec 1-24.

    • 3 replies
    • 262 views
  18. COG-UK has released (at GISAID) six 501.v2 SARS CoV2 sequences (England/205280030/2020, England/205280029/2020, England/205280028/2020, England/205261884/2020, England/205260233/2020, England/205390867/2021) from England.

    • 6 replies
    • 367 views
  19. COG-UK has released (at GISAID) five 501.v2 SARS CoV2 sequences (England/205320747/2020, England/205300109/2020, England/205300065/2020, England/205300064/2020, England/205221138/2020) from England sans Spike deletions collected Dec 28.

    • 5 replies
    • 324 views
  20. National Institute of Infectious Diseases has released (at GISAID) nine UK Variant B.1.1.7 SARS CoV2 sequences (Japan/IC-0446/2020, Japan/IC-0449/2020, Japan/IC-0454/2020, Japan/IC-0455/2020, Japan/IC-0456/2020, Japan/IC-0485/2020, Japan/IC-0486/2020, Japan/IC-0498/2020, Japan/IC-0499/2020) from Japan ex-UK collected in Dec.

    • 9 replies
    • 429 views
  21. National Institute of Infectious Diseases has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (Japan/IC-0478/2020 & Japan/IC-0478/2020) from Japan ex-UAE collected in Dec.

    • 2 replies
    • 237 views
  22. France SUD has released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequence, France/PAC-SC784/2020, from Embrun France collected Dec 28.

    • 1 reply
    • 198 views
  23. France SUD has released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequence, France/PAC-SC765/2020, from Toulon France collected Dec 28.

    • 1 reply
    • 197 views
  24. France SUD has released (at GISAID) two UK Variant B.1.1.7 SARS CoV2 sequences (France/NAQ-SC788/2020, France/NAQ-SC788/2020) from Anglet France collected Dec 26.

    • 2 replies
    • 228 views
  25. France SUD has released (at GISAID) a UK Variant B.1.1.7 SARS CoV2 sequence, France/NAQ-SC785/2020, From La Brède France collected between Dec 28.

    • 1 reply
    • 217 views

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