niman

KRISP has released (at GISAID) a 501.v2 (B.1.351) variant sequence collected on Jan 7 in Inhambane. Mozambique/INS-K007977/2021 1/7 29F Inhambane Mozambique

A listener suggested dust may be to blame and after vacuuming my keyboard, today's commentary (10:45 min) was clear.

Jan 29 JNJ Vaccine 501.v2 escape U Mich outbreak --> 18 cases Wayne Co distinct ---> 6+2 cases https://recombinomics.co/thedrnimanshow/2021/012921_MI_Vaccines.mp3

Several individuals were tested through Griffin Hospital’s testing program between January 6 and January 18, 2021. Subsequent genomic sequencing by Griffin’s laboratory partner, The Jackson Laboratory of Farmington, confirmed the presence of the UK variant. The four individuals who have been newly identified to have the UK variant live in New Haven and Oxford, though only two live in the same household. Aside from those two, there does not appear to be a link between these individuals, nor does there appear to be a link with the other four previously identified cases. One individual remains in isolation and the others have completed their isolation periods. The Connecticut Department of Public Health has confirmed that one individual recently traveled to the United Arab Emirates and had contact with a person who tested positive there. Travel histories on the other individuals are unknown at this time. https://news.hamlethub.com/newfairfield/publicsafety/48946-variant-of-covid-19-detected-in-four-additional-connecticut-residents-total-number-of-cases-in-the-state-is-now-eight

USA/WA-SFS-S3633/2021 1/9 Pierce County Washington matched B.1.1.7 with Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=47.01470105197427%2C-122.34668251258464&z=9

Seattle Flu Study has released (at GISAID) a B.1.1.7 sequences collected on Jan 9 in Pierce County USA/WA-SFS-S3633/2021 1/9 Pierce County Washington

USA/CT-JAX-J000015/2021 1/6 21M Connecticut matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=41.42929042846394%2C-73.15350683911505&z=11

USA/CT-JAX-J000016/2021 1/6 25M Connecticut matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=41.42929042846394%2C-73.15350683911505&z=11

The Jackson Laboratory has released (at GISAID) two B.1.1.7 sequences collected on Jan 6 USA/CT-JAX-J000016/2021 1/6 25M Connecticut USA/CT-JAX-J000015/2021 1/6 21M Connecticut

USA/IN-PU-100821/2021 1/12 Indiana matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.52256977718659%2C-87.33636895078126&z=9

Carpi Laboratory has released (at GISAID) a B.1.1.7 sequence collected on Jan 12 USA/IN-PU-100821/2021 1/12 Indiana

Ireland/G-NVRL-21IRL00163/2021 1/14 matched 501.v2 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=53.253425720678756%2C-9.089258610563675&z=12

National Virus Reference Laboratory has released a 510.v2 variant sequence from Gatway collected Jan 14

Ireland/D-NVRL-21IRL00174/2020 12/29 matched 501.v2 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=53.298847753702375%2C-6.356150983750035&z=10

Ireland/D-NVRL-21IRL00177/2020 12/26 matched 501.v2 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=53.298847753702375%2C-6.356150983750035&z=10

Ireland/D-NVRL-21IRL00178/2020 12/29 matched 501.v2 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=53.298847753702375%2C-6.356150983750035&z=10

National Virus Reference Laboratory has released four 510.v2 variant sequences from Dublin collected Dec 26-Jan 13 Ireland/D-NVRL-21IRL00178/2020 12/29 20sF Dublin Ireland/D-NVRL-21IRL00177/2020 12/26 20sM Dublin Ireland/D-NVRL-21IRL00174/2020 12/29 20sM Dublin Ireland/D-NVRL-21IRL12824/2021 1/13 20sF Dublin

USA/WY-WPHL-21008909/2021 1/24 42 Wyoming matched B.1.1.7 with Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.771459652062035%2C-105.49332580464176&z=8

USA/WY-WPHL-21008925/2021 1/24 20 Wyoming matched B.1.1.7 with Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.771459652062035%2C-105.49332580464176&z=8

Wyoming Public Health Laboratory has released (at GISAID) two B.1.1.7 sequences collected on Jan 24 USA/WY-WPHL-21008925/2021 1/24 20 Wyoming USA/WY-WPHL-21008909/2021 1/24 42 Wyoming

Canada/ON-PHL-21-UNK335/2021 Barrie Ontario Canada map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.35640228852871%2C-79.81069961989176&z=11

Canada/ON-PHL-21-UNK334/2021 Barrie Ontario Canada map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.35640228852871%2C-79.81069961989176&z=11

Canada/ON-PHL-21-UNK333/2021 Barrie Ontario Canada map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.35640228852871%2C-79.81069961989176&z=11

Canada/ON-PHL-21-UNK332/2021 Barrie Ontario Canada map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.35640228852871%2C-79.81069961989176&z=11

Canada/ON-PHL-21-UNK331/2021 Barrie Ontario Canada map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=44.35640228852871%2C-79.81069961989176&z=11