Everything posted by niman
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Second BA.2.86 Sequence from Tokushima Japan
Japan/PG-571096/2023 Tokushima 9/4/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1
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Sixth BA.2.86 Sequence from Israel
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=31.96112803429161%2C34.832324330586204&z=13
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Sixth BA.2.86 Sequence from Israel
Israel/SMC-7115312/2023 Be'er Ya'akov 9/19/23 collection Spike ins16MPLF, V483del
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Nineth BA.2.86 Sequence from New York
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.751839246789814%2C-74.36265461873657&z=9
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Nineth BA.2.86 Sequence from New York
NY-CDC-QDX84783166/2023 New York 9/5/23 collection 40M Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C NSP1 H110Q NSP8 S8F NSP14 S221A NSP14 N408K C25549T (ORF3a) T27134C ( M)
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Thirteenth BA.2.86 Sequence from New York USA
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.86796806544166%2C-74.01614039367287&z=10
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Thirteenth BA.2.86 Sequence from New York USA
USA/NY-CDC-VSX-A336671/2023 New York 9/16/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C NSP3 V1932I NSP14 S221A NSP14 N408K NSP15 V69M T26229C (ORF3a) T27134C (M)
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Nineth BA.2.86 Sequence from New York
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.668168043518904%2C-74.33518879842407&z=9
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Nineth BA.2.86 Sequence from New York
NY-CDC-QDX84783166/2023 New York 9/5/23 collection 40M Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C NSP14 S221A
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Thirteenth BA.2.86 Sequence from New York USA
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.48325254994279%2C-74.04360621398537&z=9
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Thirteenth BA.2.86 Sequence from New York USA
USA/NY-CDC-VSX-A336671/2023 New York 9/16/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C
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Eighty First BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.80716522546136%2C-0.103860865211991&z=11
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Eighty First BA.2.86 Sequence from England
England/CLIMB-CM7YRZ8W/2023 England 9/23/23 collection NSP3 K1155R BA.2.86.1 H/T @OliasDave
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Fifty Fifth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.494677780528114%2C-0.4039249521260535&z=11
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Fifty Fifth BA.2.86 Sequence from England
England/CLIMB-CM7YKD6K/2023 England collected 9/12/2023 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 C4456T (NSP3) Spike V193L
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Sixty Sixth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.78426069954003%2C-0.26804749848632126&z=13
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Sixty Sixth BA.2.86 Sequence from England
England/CLIMB-CM7YF6QJ/2023 England 9/18/23 collection date Spike V483del NSP3 K1155R BA.2.86.1 Spike V193L
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Eightieth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.709667025862274%2C-0.0901882777343932&z=10
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Eightieth BA.2.86 Sequence from England
England/CLIMB-CM7YEHW1/2023 England 9/24/23 collection NSP3 K1155R BA.2.86.1 Spike V193L H/T @OliasDave
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Eightieth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.709667025862274%2C-0.0901882777343932&z=10
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Eightieth BA.2.86 Sequence from England
England/CLIMB-CM7YEHW1/2023 England 9/24/23 collection NSP3 K1155R BA.2.86.1 H/T @OliasDave
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Seventy Nineth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.61596637804193%2C-0.1368801722656432&z=10
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Seventy Nineth BA.2.86 Sequence from England
England/CLIMB-CM7YJMZC/2023 England 9/23/23 collection NSP3 K1155R BA.2.86.1 H/T @OliasDave
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Seventy Eighth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.54920039510063%2C-0.1410000453125182&z=10
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Fifth BA.2.86 Sequence from Scotland
collection date 2023-09-04 geographic location United Kingdom host common name not provided host health state not provided host Homo sapiens host sex not provided host subject id not provided isolate not provided sample capture status active surveillance in response to outbreak sample name COG-UK/CLIMB-CM7YMTTU ENA-CHECKLIST ERC000033 INSDC center name West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research Submitter Id COG-UK/CLIMB-CM7YMTTU broker name COVID-19 Genomics UK Consortium collecting institution West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research collector name not provided definition for seropositive sample not provided geographic location (region and locality) Scotland scientific_name Severe acute respiratory syndrome coronavirus 2 serotype (required for a seropositive sample) not provided virus identifier not provided Submission EBI; 2023-09-21 https://www.ncbi.nlm.nih.gov/biosample/SAMEA114398390