niman

FLSR043_other_USA_2016-09-28 matches Sequences producing significant alignments: Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments Sequences producing significant alignments: Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession Select seq gb|KX262887.1| Zika virus isolate 103451, complete genome 18462 18462 100% 0.0 99% KX262887.1 Select seq gb|KX694534.1| Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome 18453 18453 100% 0.0 99% KX694534.1 Select seq gb|KY014327.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds 18437 18437 100% 0.0 99% KY014327.1 Select seq gb|KX247632.1| Zika virus isolate MEX_I_7 polyprotein gene, complete cds 18435 18435 100% 0.0 99% KX247632.1 Select seq gb|KY014315.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds 18431 18431 100% 0.0 99% KY014315.1 Select seq gb|KX856011.1| Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome 18426 18426 100% 0.0 99% KX856011.1 Select seq gb|KX446951.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome 18426 18426 100% 0.0 99% KX446951.1 Select seq gb|KU501217.1| Zika virus strain 8375 polyprotein gene, complete cds 18426 18426 99% 0.0 99% KU501217.1 Select seq gb|KX446950.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome 18422 18422 100% 0.0 99% KX446950.1 Select seq gb|KU870645.1| Zika virus isolate FB-GWUH-2016, complete genome 18422 18422 100% 0.0 99% KU870645.1 Select seq gb|KU501216.1| Zika virus strain 103344 polyprotein gene, complete cds 18420 18420 99% 0.0 99% KU501216.1 Select seq gb|KX447510.1| Zika virus isolate 1_0049_PF polyprotein gene, complete cds 18408 18408 99% 0.0 99% KX447510.1 Select seq gb|KX447512.1| Zika virus isolate 1_0181_PF polyprotein gene, complete cds 18399 18399 99% 0.0 99% KX447512.1 Select seq gb|KX369547.1| Zika virus strain PF13/251013-18, complete genome 18399 18399 99% 0.0 99% KX369547.1 Select seq gb|KU509998.3| Zika virus strain Haiti/1225/2014, complete genome 18399 18399 100% 0.0 99% KU509998.3 Select seq gb|KJ776791.2| Zika virus strain H/PF/2013, complete genome 18393 18393 99% 0.0 99% KJ776791.2 Select seq gb|KX447509.1| Zika virus isolate 1_0087_PF polyprotein gene, complete cds 18393 18393 99% 0.0 99% KX447509.1 Select seq gb|KX766029.1| Zika virus isolate R116265, complete genome 18390 18390 100% 0.0 99% KX766029.1 Select seq gb|KX447513.1| Zika virus isolate 1_0134_PF polyprotein gene, complete cds 18390 18390 99% 0.0 99% KX447513.1 Select seq gb|KU926309.1| Zika virus isolate Rio-U1, complete genome 18390 18390 100% 0.0 99% KU926309.1 Select seq gb|KR872956.1| Zika virus strain 17829 polyprotein gene, complete cds 18386 18386 100% 0.0 99% KR872956.1 Select seq gb|KX197205.1| Zika virus isolate 9, complete genome 18386 18386 100% 0.0 99% KX197205.1 Select seq gb|KX280026.1| Zika virus isolate Paraiba_01, complete genome 18386 18386 100% 0.0 99% KX280026.1 Select seq gb|KU991811.1| Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds 18386 18386 100% 0.0 99% KU991811.1 Select seq gb|KU321639.1| Zika virus strain ZikaSPH2015, complete genome 18386 18386 100% 0.0 99% KU321639.1 Select seq gb|KX447515.1| Zika virus isolate 1_0030_PF polyprotein gene, complete cds 18384 18384 99% 0.0 99% KX447515.1 Select seq gb|KX447511.1| Zika virus isolate 1_0015_PF polyprotein gene, complete cds 18384 18384 99% 0.0 99% KX447511.1 Select seq gb|KX447514.1| Zika virus isolate 1_0035_PF polyprotein gene, complete cds 18381 18381 99% 0.0 99% KX447514.1 Select seq gb|KX051563.1| Zika virus isolate Haiti/1/2016, complete genome 18381 18381 100% 0.0 99% KX051563.1 Select seq gb|KU707826.1| Zika virus isolate SSABR1, complete genome 18381 18381 100% 0.0 99% KU707826.1 Select seq gb|KU365779.1| Zika virus strain BeH819966 polyprotein gene, complete cds 18381 18381 100% 0.0 99% KU365779.1 Select seq gb|KU729218.1| Zika virus isolate BeH828305 polyprotein gene, complete cds 18377 18377 100% 0.0 99% KU729218.1 Select seq gb|KX447516.1| Zika virus isolate 1_0111_PF polyprotein gene, complete cds 18375 18375 99% 0.0 99% KX447516.1 Select seq gb|KU758877.1| Zika virus isolate 17271 polyprotein gene, complete cds 18372 18372 100% 0.0 99% KU758877.1 Select seq gb|KX197192.1| Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome 18372 18372 100% 0.0 99% KX197192.1 Select seq gb|KU365780.1| Zika virus strain BeH815744 polyprotein gene, complete cds 18372 18372 100% 0.0 99% KU365780.1 Select seq gb|KX811222.1| Zika virus isolate Brazil_2015_MG, complete genome 18368 18368 100% 0.0 99% KX811222.1 Select seq gb|KY014297.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds 18363 18363 100% 0.0 99% KY014297.1 Select seq gb|KX198135.1| Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome 18363 18363 100% 0.0 99% KX198135.1 Select seq gb|KU365777.1| Zika virus strain BeH818995 polyprotein gene, complete cds 18363 18363 100% 0.0 99% KU365777.1 Select seq gb|KX879604.1| Zika virus isolate SN089, complete genome 18361 18361 99% 0.0 99% KX879604.1 Select seq gb|KY014303.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds 18359 18359 100% 0.0 99% KY014303.1 Select seq gb|KU647676.1| Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds 18359 18359 100% 0.0 99% KU647676.1 Select seq gb|KX247646.1| Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome 18354 18354 100% 0.0 99% KX247646.1 Select seq gb|KX156776.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome 18354 18354 100% 0.0 99% KX156776.1 Select seq gb|KU940228.1| Zika virus isolate Bahia07, partial genome 18354 18354 100% 0.0 99% KU940228.1 Select seq gb|KU365778.1| Zika virus strain BeH819015 polyprotein gene, complete cds 18354 18354 100% 0.0 99% KU365778.1 Select seq gb|KU312312.1| Zika virus isolate Z1106033 polyprotein gene, complete cds 18354 18354 100% 0.0 99% KU312312.1 Select seq gb|KX879603.1| Zika virus isolate SN062, complete genome 18352 18352 99% 0.0 99% KX879603.1 Select seq gb|KY014304.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds 18350 18350 100% 0.0 99% KY014304.1 Select seq gb|KX156774.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome 18350 18350 100% 0.0 99% KX156774.1 Select seq gb|KU729217.2| Zika virus isolate BeH823339 polyprotein gene, complete cds 18350 18350 100% 0.0 99% KU729217.2 Select seq gb|KU497555.1| Zika virus isolate Brazil-ZKV2015, complete genome 18350 18350 100% 0.0 99% KU497555.1 Select seq gb|KU527068.1| Zika virus strain Natal RGN, complete genome 18350 18350 100% 0.0 99% KU527068.1 Select seq gb|KX806557.2| Zika virus isolate TS17-2016, complete genome 18345 18345 99% 0.0 99% KX806557.2 Select seq gb|KU820897.5| Zika virus isolate FLR polyprotein gene, complete cds 18345 18345 100% 0.0 99% KU820897.5 Select seq gb|KX447517.1| Zika virus isolate 1_0038_PF polyprotein gene, complete cds 18345 18345 99% 0.0 99% KX447517.1 Select seq gb|KU937936.1| Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds 18345 18345 100% 0.0 99% KU937936.1 Select seq gb|KX156775.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome 18345 18345 100% 0.0 99% KX156775.1 Select seq gb|KX087102.1| Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome 18345 18345 100% 0.0 99% KX087102.1 Select seq gb|KU501215.1| Zika virus strain PRVABC59, complete genome 18345 18345 100% 0.0 99% KU501215.1 Select seq gb|KX601168.1| Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome 18341 18341 100% 0.0 99% KX601168.1 Select seq gb|KX087101.2| Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome 18341 18341 100% 0.0 99% KX087101.2 Select seq gb|KU922960.1| Zika virus isolate MEX/InDRE/Sm/2016, complete genome 18341 18341 100% 0.0 99% KU922960.1 Select seq gb|KY014296.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds 18336 18336 100% 0.0 99% KY014296.1 Select seq gb|KX548902.1| Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds 18336 18336 100% 0.0 99% KX548902.1 Select seq gb|KX520666.1| Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds 18336 18336 100% 0.0 99% KX520666.1 Select seq gb|KX377337.1| Zika virus strain PRVABC-59, complete genome 18336 18336 100% 0.0 99% KX377337.1 Select seq gb|KU926310.1| Zika virus isolate Rio-S1, complete genome 18336 18336 100% 0.0 99% KU926310.1 Select seq gb|KU922923.1| Zika virus isolate MEX/InDRE/Lm/2016, complete genome 18336 18336 100% 0.0 99% KU922923.1 Select seq gb|KU853013.1| Zika virus isolate Dominican Republic/2016/PD2, complete genome 18336 18336 100% 0.0 99% KU853013.1 Select seq gb|KU853012.1| Zika virus isolate Dominican Republic/2016/PD1, complete genome 18336 18336 100% 0.0 99% KU853012.1 Select seq gb|KY014300.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds 18332 18332 100% 0.0 99% KY014300.1 Select seq dbj|LC190723.1| Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016 18332 18332 100% 0.0 99% LC190723.1 Select seq gb|KU955590.1| Zika virus isolate Z16019 polyprotein gene, complete cds 18332 18332 100% 0.0 99% KU955590.1 Select seq gb|KX893855.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome 18330 18330 100% 0.0 99% KX893855.1 Select seq gb|KX766028.1| Zika virus isolate R114916, complete genome 18328 18328 100% 0.0 99% KX766028.1 Select seq gb|KY014321.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds 18327 18327 100% 0.0 99% KY014321.1 Select seq gb|KX702400.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome 18327 18327 100% 0.0 99% KX702400.1 Select seq gb|KU740184.2| Zika virus isolate GD01 polyprotein gene, complete cds 18327 18327 100% 0.0 99% KU740184.2 Select seq gb|KU761564.1| Zika virus isolate GDZ16001 polyprotein gene, complete cds 18327 18327 100% 0.0 99% KU761564.1 Select seq gb|KY014295.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds 18323 18323 100% 0.0 99% KY014295.1 Select seq gb|KX842449.2| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds 18323 18323 100% 0.0 99% KX842449.2 Select seq gb|KU820898.1| Zika virus isolate GZ01 polyprotein gene, complete cds 18318 18318 99% 0.0 99% KU820898.1 Select seq gb|KX922707.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL039U polyprotein gene, complete cds 18314 18314 100% 0.0 99% KX922707.1 Select seq gb|KX673530.1| Zika virus isolate PHE_semen_Guadeloupe, complete genome 18314 18314 100% 0.0 99% KX673530.1 Select seq gb|KX056898.1| Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds 18312 18312 99% 0.0 99% KX056898.1 Select seq gb|KY014323.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-02-MOS polyprotein gene, complete cds 18309 18309 100% 0.0 99% KY014323.1 Select seq gb|KY014314.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0436-SER polyprotein gene, complete cds 18309 18309 100% 0.0 99% KY014314.1 Select seq gb|KX922703.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL021U polyprotein gene, complete cds 18309 18309 99% 0.0 99% KX922703.1 Select seq gb|KX838905.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL02M polyprotein gene, complete cds 18309 18309 100% 0.0 99% KX838905.2 Select seq gb|KX832731.1| Zika virus isolate ZIKV/Homo_sapiens/USA//2016/Hu0015SA polyprotein gene, complete cds 18309 18309 100% 0.0 99% KX832731.1 Select seq gb|KX922706.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL038U polyprotein gene, complete cds 18307 18307 100% 0.0 99% KX922706.1 Select seq gb|KY014316.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-039-URI polyprotein gene, complete cds 18305 18305 100% 0.0 99% KY014316.1 Select seq gb|KX922704.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL030U polyprotein gene, complete cds 18305 18305 100% 0.0 99% KX922704.1 Select seq gb|KX117076.1| Zika virus isolate Zhejiang04, complete genome 18303 18303 99% 0.0 99% KX117076.1 Select seq gb|KY014320.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ42D1-URI polyprotein gene, complete cds 18301 18301 100% 0.0 99% KY014320.1 Select seq gb|KY014322.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-03-MOS polyprotein gene, complete cds 18300 18300 100% 0.0 99% KY014322.1 Select seq gb|KX838906.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL03M polyprotein gene, complete cds 18300 18300 100% 0.0 99% KX838906.2 Select seq gb|KX838904.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL01M polyprotein gene, complete cds 18300 18300 100% 0.0 99% KX838904.2

FLWB044_other_USA_2016-09-28 matches Sequences producing significant alignments: Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments Sequences producing significant alignments: Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession Select seq gb|KX262887.1| Zika virus isolate 103451, complete genome 18462 18462 100% 0.0 99% KX262887.1 Select seq gb|KX694534.1| Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome 18453 18453 100% 0.0 99% KX694534.1 Select seq gb|KY014327.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds 18437 18437 100% 0.0 99% KY014327.1 Select seq gb|KX247632.1| Zika virus isolate MEX_I_7 polyprotein gene, complete cds 18435 18435 100% 0.0 99% KX247632.1 Select seq gb|KY014315.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds 18431 18431 100% 0.0 99% KY014315.1 Select seq gb|KX856011.1| Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome 18426 18426 100% 0.0 99% KX856011.1 Select seq gb|KX446951.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome 18426 18426 100% 0.0 99% KX446951.1 Select seq gb|KU501217.1| Zika virus strain 8375 polyprotein gene, complete cds 18426 18426 99% 0.0 99% KU501217.1 Select seq gb|KX446950.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome 18422 18422 100% 0.0 99% KX446950.1 Select seq gb|KU870645.1| Zika virus isolate FB-GWUH-2016, complete genome 18422 18422 100% 0.0 99% KU870645.1 Select seq gb|KU501216.1| Zika virus strain 103344 polyprotein gene, complete cds 18420 18420 99% 0.0 99% KU501216.1 Select seq gb|KX447510.1| Zika virus isolate 1_0049_PF polyprotein gene, complete cds 18408 18408 99% 0.0 99% KX447510.1 Select seq gb|KX447512.1| Zika virus isolate 1_0181_PF polyprotein gene, complete cds 18399 18399 99% 0.0 99% KX447512.1 Select seq gb|KX369547.1| Zika virus strain PF13/251013-18, complete genome 18399 18399 99% 0.0 99% KX369547.1 Select seq gb|KU509998.3| Zika virus strain Haiti/1225/2014, complete genome 18399 18399 100% 0.0 99% KU509998.3 Select seq gb|KJ776791.2| Zika virus strain H/PF/2013, complete genome 18393 18393 99% 0.0 99% KJ776791.2 Select seq gb|KX447509.1| Zika virus isolate 1_0087_PF polyprotein gene, complete cds 18393 18393 99% 0.0 99% KX447509.1 Select seq gb|KX766029.1| Zika virus isolate R116265, complete genome 18390 18390 100% 0.0 99% KX766029.1 Select seq gb|KX447513.1| Zika virus isolate 1_0134_PF polyprotein gene, complete cds 18390 18390 99% 0.0 99% KX447513.1 Select seq gb|KU926309.1| Zika virus isolate Rio-U1, complete genome 18390 18390 100% 0.0 99% KU926309.1 Select seq gb|KR872956.1| Zika virus strain 17829 polyprotein gene, complete cds 18386 18386 100% 0.0 99% KR872956.1 Select seq gb|KX197205.1| Zika virus isolate 9, complete genome 18386 18386 100% 0.0 99% KX197205.1 Select seq gb|KX280026.1| Zika virus isolate Paraiba_01, complete genome 18386 18386 100% 0.0 99% KX280026.1 Select seq gb|KU991811.1| Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds 18386 18386 100% 0.0 99% KU991811.1 Select seq gb|KU321639.1| Zika virus strain ZikaSPH2015, complete genome 18386 18386 100% 0.0 99% KU321639.1 Select seq gb|KX447515.1| Zika virus isolate 1_0030_PF polyprotein gene, complete cds 18384 18384 99% 0.0 99% KX447515.1 Select seq gb|KX447511.1| Zika virus isolate 1_0015_PF polyprotein gene, complete cds 18384 18384 99% 0.0 99% KX447511.1 Select seq gb|KX447514.1| Zika virus isolate 1_0035_PF polyprotein gene, complete cds 18381 18381 99% 0.0 99% KX447514.1 Select seq gb|KX051563.1| Zika virus isolate Haiti/1/2016, complete genome 18381 18381 100% 0.0 99% KX051563.1 Select seq gb|KU707826.1| Zika virus isolate SSABR1, complete genome 18381 18381 100% 0.0 99% KU707826.1 Select seq gb|KU365779.1| Zika virus strain BeH819966 polyprotein gene, complete cds 18381 18381 100% 0.0 99% KU365779.1 Select seq gb|KU729218.1| Zika virus isolate BeH828305 polyprotein gene, complete cds 18377 18377 100% 0.0 99% KU729218.1 Select seq gb|KX447516.1| Zika virus isolate 1_0111_PF polyprotein gene, complete cds 18375 18375 99% 0.0 99% KX447516.1 Select seq gb|KU758877.1| Zika virus isolate 17271 polyprotein gene, complete cds 18372 18372 100% 0.0 99% KU758877.1 Select seq gb|KX197192.1| Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome 18372 18372 100% 0.0 99% KX197192.1 Select seq gb|KU365780.1| Zika virus strain BeH815744 polyprotein gene, complete cds 18372 18372 100% 0.0 99% KU365780.1 Select seq gb|KX811222.1| Zika virus isolate Brazil_2015_MG, complete genome 18368 18368 100% 0.0 99% KX811222.1 Select seq gb|KY014297.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds 18363 18363 100% 0.0 99% KY014297.1 Select seq gb|KX198135.1| Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome 18363 18363 100% 0.0 99% KX198135.1 Select seq gb|KU365777.1| Zika virus strain BeH818995 polyprotein gene, complete cds 18363 18363 100% 0.0 99% KU365777.1 Select seq gb|KX879604.1| Zika virus isolate SN089, complete genome 18361 18361 99% 0.0 99% KX879604.1 Select seq gb|KY014303.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds 18359 18359 100% 0.0 99% KY014303.1 Select seq gb|KU647676.1| Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds 18359 18359 100% 0.0 99% KU647676.1 Select seq gb|KX247646.1| Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome 18354 18354 100% 0.0 99% KX247646.1 Select seq gb|KX156776.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome 18354 18354 100% 0.0 99% KX156776.1 Select seq gb|KU940228.1| Zika virus isolate Bahia07, partial genome 18354 18354 100% 0.0 99% KU940228.1 Select seq gb|KU365778.1| Zika virus strain BeH819015 polyprotein gene, complete cds 18354 18354 100% 0.0 99% KU365778.1 Select seq gb|KU312312.1| Zika virus isolate Z1106033 polyprotein gene, complete cds 18354 18354 100% 0.0 99% KU312312.1 Select seq gb|KX879603.1| Zika virus isolate SN062, complete genome 18352 18352 99% 0.0 99% KX879603.1 Select seq gb|KY014304.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds 18350 18350 100% 0.0 99% KY014304.1 Select seq gb|KX156774.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome 18350 18350 100% 0.0 99% KX156774.1 Select seq gb|KU729217.2| Zika virus isolate BeH823339 polyprotein gene, complete cds 18350 18350 100% 0.0 99% KU729217.2 Select seq gb|KU497555.1| Zika virus isolate Brazil-ZKV2015, complete genome 18350 18350 100% 0.0 99% KU497555.1 Select seq gb|KU527068.1| Zika virus strain Natal RGN, complete genome 18350 18350 100% 0.0 99% KU527068.1 Select seq gb|KX806557.2| Zika virus isolate TS17-2016, complete genome 18345 18345 99% 0.0 99% KX806557.2 Select seq gb|KU820897.5| Zika virus isolate FLR polyprotein gene, complete cds 18345 18345 100% 0.0 99% KU820897.5 Select seq gb|KX447517.1| Zika virus isolate 1_0038_PF polyprotein gene, complete cds 18345 18345 99% 0.0 99% KX447517.1 Select seq gb|KU937936.1| Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds 18345 18345 100% 0.0 99% KU937936.1 Select seq gb|KX156775.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome 18345 18345 100% 0.0 99% KX156775.1 Select seq gb|KX087102.1| Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome 18345 18345 100% 0.0 99% KX087102.1 Select seq gb|KU501215.1| Zika virus strain PRVABC59, complete genome 18345 18345 100% 0.0 99% KU501215.1 Select seq gb|KX601168.1| Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome 18341 18341 100% 0.0 99% KX601168.1 Select seq gb|KX087101.2| Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome 18341 18341 100% 0.0 99% KX087101.2 Select seq gb|KU922960.1| Zika virus isolate MEX/InDRE/Sm/2016, complete genome 18341 18341 100% 0.0 99% KU922960.1 Select seq gb|KY014296.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds 18336 18336 100% 0.0 99% KY014296.1 Select seq gb|KX548902.1| Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds 18336 18336 100% 0.0 99% KX548902.1 Select seq gb|KX520666.1| Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds 18336 18336 100% 0.0 99% KX520666.1 Select seq gb|KX377337.1| Zika virus strain PRVABC-59, complete genome 18336 18336 100% 0.0 99% KX377337.1 Select seq gb|KU926310.1| Zika virus isolate Rio-S1, complete genome 18336 18336 100% 0.0 99% KU926310.1 Select seq gb|KU922923.1| Zika virus isolate MEX/InDRE/Lm/2016, complete genome 18336 18336 100% 0.0 99% KU922923.1 Select seq gb|KU853013.1| Zika virus isolate Dominican Republic/2016/PD2, complete genome 18336 18336 100% 0.0 99% KU853013.1 Select seq gb|KU853012.1| Zika virus isolate Dominican Republic/2016/PD1, complete genome 18336 18336 100% 0.0 99% KU853012.1 Select seq gb|KY014300.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds 18332 18332 100% 0.0 99% KY014300.1 Select seq dbj|LC190723.1| Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016 18332 18332 100% 0.0 99% LC190723.1 Select seq gb|KU955590.1| Zika virus isolate Z16019 polyprotein gene, complete cds 18332 18332 100% 0.0 99% KU955590.1 Select seq gb|KX893855.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome 18330 18330 100% 0.0 99% KX893855.1 Select seq gb|KX766028.1| Zika virus isolate R114916, complete genome 18328 18328 100% 0.0 99% KX766028.1 Select seq gb|KY014321.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds 18327 18327 100% 0.0 99% KY014321.1 Select seq gb|KX702400.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome 18327 18327 100% 0.0 99% KX702400.1 Select seq gb|KU740184.2| Zika virus isolate GD01 polyprotein gene, complete cds 18327 18327 100% 0.0 99% KU740184.2 Select seq gb|KU761564.1| Zika virus isolate GDZ16001 polyprotein gene, complete cds 18327 18327 100% 0.0 99% KU761564.1 Select seq gb|KY014295.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds 18323 18323 100% 0.0 99% KY014295.1 Select seq gb|KX842449.2| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds 18323 18323 100% 0.0 99% KX842449.2 Select seq gb|KU820898.1| Zika virus isolate GZ01 polyprotein gene, complete cds 18318 18318 99% 0.0 99% KU820898.1 Select seq gb|KX922707.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL039U polyprotein gene, complete cds 18314 18314 100% 0.0 99% KX922707.1 Select seq gb|KX673530.1| Zika virus isolate PHE_semen_Guadeloupe, complete genome 18314 18314 100% 0.0 99% KX673530.1 Select seq gb|KX056898.1| Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds 18312 18312 99% 0.0 99% KX056898.1 Select seq gb|KY014323.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-02-MOS polyprotein gene, complete cds 18309 18309 100% 0.0 99% KY014323.1 Select seq gb|KY014314.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0436-SER polyprotein gene, complete cds 18309 18309 100% 0.0 99% KY014314.1 Select seq gb|KX922703.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL021U polyprotein gene, complete cds 18309 18309 99% 0.0 99% KX922703.1 Select seq gb|KX838905.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL02M polyprotein gene, complete cds 18309 18309 100% 0.0 99% KX838905.2 Select seq gb|KX832731.1| Zika virus isolate ZIKV/Homo_sapiens/USA//2016/Hu0015SA polyprotein gene, complete cds 18309 18309 100% 0.0 99% KX832731.1 Select seq gb|KX922706.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL038U polyprotein gene, complete cds 18307 18307 100% 0.0 99% KX922706.1 Select seq gb|KY014316.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-039-URI polyprotein gene, complete cds 18305 18305 100% 0.0 99% KY014316.1 Select seq gb|KX922704.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL030U polyprotein gene, complete cds 18305 18305 100% 0.0 99% KX922704.1 Select seq gb|KX117076.1| Zika virus isolate Zhejiang04, complete genome 18303 18303 99% 0.0 99% KX117076.1 Select seq gb|KY014320.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ42D1-URI polyprotein gene, complete cds 18301 18301 100% 0.0 99% KY014320.1 Select seq gb|KY014322.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-03-MOS polyprotein gene, complete cds 18300 18300 100% 0.0 99% KY014322.1 Select seq gb|KX838906.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL03M polyprotein gene, complete cds 18300 18300 100% 0.0 99% KX838906.2 Select seq gb|KX838904.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL01M polyprotein gene, complete cds 18300 18300 100% 0.0 99% KX838904.2

FLUR063_M28_USA_2016-10-03 matches Sequences producing significant alignments: Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments Sequences producing significant alignments: Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession Select seq gb|KY014295.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds 8709 17678 95% 0.0 99% KY014295.1 Select seq gb|KX842449.2| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds 8709 17678 95% 0.0 99% KX842449.2 Select seq gb|KX922706.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL038U polyprotein gene, complete cds 8707 17663 95% 0.0 99% KX922706.1 Select seq gb|KY014323.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-02-MOS polyprotein gene, complete cds 8706 17665 95% 0.0 99% KY014323.1 Select seq gb|KX922703.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL021U polyprotein gene, complete cds 8706 17663 95% 0.0 99% KX922703.1 Select seq gb|KX838905.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL02M polyprotein gene, complete cds 8706 17665 95% 0.0 99% KX838905.2 Select seq gb|KX832731.1| Zika virus isolate ZIKV/Homo_sapiens/USA//2016/Hu0015SA polyprotein gene, complete cds 8706 17665 95% 0.0 99% KX832731.1 Select seq gb|KX838904.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL01M polyprotein gene, complete cds 8702 17663 95% 0.0 99% KX838904.2 Select seq gb|KY014324.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-01-MOS polyprotein gene, complete cds 8700 17660 95% 0.0 99% KY014324.1 Select seq gb|KX922704.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL030U polyprotein gene, complete cds 8700 17661 95% 0.0 99% KX922704.1 Select seq gb|KY014304.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds 8691 17624 95% 0.0 99% KY014304.1 Select seq gb|KY014300.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds 8689 17633 95% 0.0 99% KY014300.1 Select seq gb|KU853013.1| Zika virus isolate Dominican Republic/2016/PD2, complete genome 8688 17622 95% 0.0 99% KU853013.1 Select seq gb|KU853012.1| Zika virus isolate Dominican Republic/2016/PD1, complete genome 8684 17618 95% 0.0 99% KU853012.1 Select seq dbj|LC190723.1| Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016 8682 17616 95% 0.0 99% LC190723.1 Select seq gb|KY014321.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds 8679 17613 95% 0.0 99% KY014321.1 Select seq gb|KY014316.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-039-URI polyprotein gene, complete cds 8679 17602 95% 0.0 99% KY014316.1 Select seq gb|KX922707.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL039U polyprotein gene, complete cds 8679 17607 95% 0.0 99% KX922707.1 Select seq gb|KX673530.1| Zika virus isolate PHE_semen_Guadeloupe, complete genome 8679 17602 95% 0.0 99% KX673530.1 Select seq gb|KY014322.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-03-MOS polyprotein gene, complete cds 8673 17593 95% 0.0 99% KY014322.1 Select seq gb|KX838906.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL03M polyprotein gene, complete cds 8673 17593 95% 0.0 99% KX838906.2 Select seq gb|KY014299.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-04-MOS polyprotein gene, complete cds 8670 17575 95% 0.0 99% KY014299.1 Select seq gb|KX922705.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL032U polyprotein gene, complete cds 8666 17582 95% 0.0 99% KX922705.1 Select seq gb|KY014314.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0436-SER polyprotein gene, complete cds 8664 17598 95% 0.0 99% KY014314.1 Select seq gb|KX922708.1| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL04M polyprotein gene, complete cds 8664 17580 95% 0.0 99% KX922708.1 Select seq gb|KX447518.1| Zika virus isolate 1_0117_PF polyprotein gene, partial cds 8655 15429 84% 0.0 99% KX447518.1 Select seq gb|KX447510.1| Zika virus isolate 1_0049_PF polyprotein gene, complete cds 8655 17535 95% 0.0 99% KX447510.1 Select seq gb|KX280026.1| Zika virus isolate Paraiba_01, complete genome 8655 17528 95% 0.0 99% KX280026.1 Select seq gb|KX811222.1| Zika virus isolate Brazil_2015_MG, complete genome 8652 17512 95% 0.0 99% KX811222.1 Select seq gb|KX369547.1| Zika virus strain PF13/251013-18, complete genome 8646 17523 95% 0.0 99% KX369547.1 Select seq gb|KU729217.2| Zika virus isolate BeH823339 polyprotein gene, complete cds 8646 17528 95% 0.0 99% KU729217.2 Select seq gb|KR872956.1| Zika virus strain 17829 polyprotein gene, complete cds 8643 17517 95% 0.0 99% KR872956.1 Select seq gb|KJ776791.2| Zika virus strain H/PF/2013, complete genome 8643 17524 95% 0.0 99% KJ776791.2 Select seq gb|KX447515.1| Zika virus isolate 1_0030_PF polyprotein gene, complete cds 8643 17515 95% 0.0 99% KX447515.1 Select seq gb|KX447513.1| Zika virus isolate 1_0134_PF polyprotein gene, complete cds 8643 17515 95% 0.0 99% KX447513.1 Select seq gb|KX447512.1| Zika virus isolate 1_0181_PF polyprotein gene, complete cds 8643 17524 95% 0.0 99% KX447512.1 Select seq gb|KX447509.1| Zika virus isolate 1_0087_PF polyprotein gene, complete cds 8643 17523 95% 0.0 99% KX447509.1 Select seq gb|KU509998.3| Zika virus strain Haiti/1225/2014, complete genome 8643 17526 95% 0.0 99% KU509998.3 Select seq gb|KU321639.1| Zika virus strain ZikaSPH2015, complete genome 8643 17517 95% 0.0 99% KU321639.1 Select seq gb|KX806557.2| Zika virus isolate TS17-2016, complete genome 8637 17465 95% 0.0 99% KX806557.2 Select seq gb|KX447516.1| Zika virus isolate 1_0111_PF polyprotein gene, complete cds 8637 17508 95% 0.0 99% KX447516.1 Select seq gb|KU729218.1| Zika virus isolate BeH828305 polyprotein gene, complete cds 8637 17501 95% 0.0 99% KU729218.1 Select seq gb|KU707826.1| Zika virus isolate SSABR1, complete genome 8637 17501 95% 0.0 99% KU707826.1 Select seq gb|KU365779.1| Zika virus strain BeH819966 polyprotein gene, complete cds 8637 17501 95% 0.0 99% KU365779.1 Select seq gb|KY014317.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ28D1-URI polyprotein gene, complete cds 8634 17382 95% 0.0 99% KY014317.1 Select seq gb|KX879604.1| Zika virus isolate SN089, complete genome 8634 17503 95% 0.0 99% KX879604.1 Select seq gb|KX197205.1| Zika virus isolate 9, complete genome 8634 17512 95% 0.0 99% KX197205.1 Select seq gb|KX447514.1| Zika virus isolate 1_0035_PF polyprotein gene, complete cds 8634 17510 95% 0.0 99% KX447514.1 Select seq gb|KX197192.1| Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome 8634 17503 95% 0.0 99% KX197192.1 Select seq gb|KU940228.1| Zika virus isolate Bahia07, partial genome 8634 17488 95% 0.0 99% KU940228.1 Select seq gb|KU926310.1| Zika virus isolate Rio-S1, complete genome 8634 17499 95% 0.0 99% KU926310.1 Select seq gb|KX879603.1| Zika virus isolate SN062, complete genome 8628 17494 95% 0.0 99% KX879603.1 Select seq gb|KX262887.1| Zika virus isolate 103451, complete genome 8628 17501 95% 0.0 99% KX262887.1 Select seq gb|KU365780.1| Zika virus strain BeH815744 polyprotein gene, complete cds 8628 17494 95% 0.0 99% KU365780.1 Select seq gb|KU365777.1| Zika virus strain BeH818995 polyprotein gene, complete cds 8628 17485 95% 0.0 99% KU365777.1 Select seq gb|KX447511.1| Zika virus isolate 1_0015_PF polyprotein gene, complete cds 8624 17510 95% 0.0 99% KX447511.1 Select seq gb|KX198135.1| Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome 8624 17490 95% 0.0 99% KX198135.1 Select seq gb|KU991811.1| Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds 8624 17524 95% 0.0 99% KU991811.1 Select seq gb|KU926309.1| Zika virus isolate Rio-U1, complete genome 8624 17503 95% 0.0 99% KU926309.1 Select seq gb|KU501217.1| Zika virus strain 8375 polyprotein gene, complete cds 8624 17474 95% 0.0 99% KU501217.1 Select seq gb|KU501216.1| Zika virus strain 103344 polyprotein gene, complete cds 8624 17470 95% 0.0 99% KU501216.1 Select seq gb|KU940224.1| Zika virus isolate Bahia09, partial genome 8621 17393 95% 0.0 99% KU940224.1 Select seq gb|KX447520.1| Zika virus isolate 1_0016_PF polyprotein gene, partial cds 8619 15044 82% 0.0 99% KX447520.1 Select seq gb|KX447517.1| Zika virus isolate 1_0038_PF polyprotein gene, complete cds 8619 17483 95% 0.0 99% KX447517.1 Select seq gb|KX520666.1| Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds 8619 17470 95% 0.0 99% KX520666.1 Select seq gb|KX051563.1| Zika virus isolate Haiti/1/2016, complete genome 8619 17506 95% 0.0 99% KX051563.1 Select seq gb|KU527068.1| Zika virus strain Natal RGN, complete genome 8619 17503 95% 0.0 99% KU527068.1 Select seq gb|KY014303.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds 8615 17485 95% 0.0 99% KY014303.1 Select seq gb|KX694534.1| Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome 8615 17494 95% 0.0 99% KX694534.1 Select seq gb|KX156776.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome 8615 17485 95% 0.0 99% KX156776.1 Select seq gb|KX156775.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome 8615 17476 95% 0.0 99% KX156775.1 Select seq gb|KU501215.1| Zika virus strain PRVABC59, complete genome 8615 17467 95% 0.0 99% KU501215.1 Select seq gb|KU365778.1| Zika virus strain BeH819015 polyprotein gene, complete cds 8615 17476 95% 0.0 99% KU365778.1 Select seq gb|KY014297.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds 8614 17483 95% 0.0 99% KY014297.1 Select seq gb|KY014320.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ42D1-URI polyprotein gene, complete cds 8610 17431 95% 0.0 99% KY014320.1 Select seq gb|KX601168.1| Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome 8610 17461 95% 0.0 99% KX601168.1 Select seq gb|KX377337.1| Zika virus strain PRVABC-59, complete genome 8610 17456 95% 0.0 99% KX377337.1 Select seq gb|KU758877.1| Zika virus isolate 17271 polyprotein gene, complete cds 8610 17479 95% 0.0 99% KU758877.1 Select seq gb|KX247646.1| Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome 8610 17485 95% 0.0 99% KX247646.1 Select seq gb|KX247632.1| Zika virus isolate MEX_I_7 polyprotein gene, complete cds 8610 17474 95% 0.0 99% KX247632.1 Select seq gb|KX087101.2| Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome 8610 17461 95% 0.0 99% KX087101.2 Select seq gb|KX156774.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome 8610 17479 95% 0.0 99% KX156774.1 Select seq gb|KU870645.1| Zika virus isolate FB-GWUH-2016, complete genome 8610 17461 95% 0.0 99% KU870645.1 Select seq gb|KU497555.1| Zika virus isolate Brazil-ZKV2015, complete genome 8610 17483 95% 0.0 99% KU497555.1 Select seq gb|KU647676.1| Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds 8610 17485 95% 0.0 99% KU647676.1 Select seq gb|KY014327.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds 8608 17474 95% 0.0 99% KY014327.1 Select seq gb|KY014296.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds 8606 17467 95% 0.0 99% KY014296.1 Select seq gb|KU820897.5| Zika virus isolate FLR polyprotein gene, complete cds 8606 17476 95% 0.0 99% KU820897.5 Select seq gb|KX446951.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome 8606 17467 95% 0.0 99% KX446951.1 Select seq gb|KX446950.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome 8606 17461 95% 0.0 99% KX446950.1 Select seq gb|KX117076.1| Zika virus isolate Zhejiang04, complete genome 8606 17434 95% 0.0 99% KX117076.1 Select seq gb|KX087102.1| Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome 8606 17476 95% 0.0 99% KX087102.1 Select seq gb|KU922960.1| Zika virus isolate MEX/InDRE/Sm/2016, complete genome 8606 17468 95% 0.0 99% KU922960.1 Select seq gb|KU922923.1| Zika virus isolate MEX/InDRE/Lm/2016, complete genome 8606 17463 95% 0.0 99% KU922923.1 Select seq gb|KY014315.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds 8601 17468 95% 0.0 99% KY014315.1 Select seq gb|KX893855.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome 8601 17468 95% 0.0 99% KX893855.1 Select seq gb|KX856011.1| Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome 8601 17465 95% 0.0 99% KX856011.1 Select seq gb|KX702400.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome 8601 17467 95% 0.0 99% KX702400.1 Select seq gb|KX253996.1| Zika virus isolate ZKC2/2016, complete genome 8601 17420 95% 0.0 99% KX253996.1 Select seq gb|KX185891.1| Zika virus isolate Zika virus/CN/SZ02/2016 polyprotein gene, complete cds 8601 17402 95% 0.0 99% KX185891.1

FLUR058_M28_USA_2016-10-11 match Sequences producing significant alignments: Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments Sequences producing significant alignments: Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession Select seq gb|KY014322.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-03-MOS polyprotein gene, complete cds 2619 11677 68% 0.0 95% KY014322.1 Select seq gb|KY014299.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-04-MOS polyprotein gene, complete cds 2619 11657 68% 0.0 95% KY014299.1 Select seq gb|KY014298.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-032-URI polyprotein gene, complete cds 2619 11296 66% 0.0 95% KY014298.1 Select seq gb|KX922708.1| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL04M polyprotein gene, complete cds 2619 11663 68% 0.0 95% KX922708.1 Select seq gb|KX922705.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL032U polyprotein gene, complete cds 2619 11677 68% 0.0 95% KX922705.1 Select seq gb|KX838906.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL03M polyprotein gene, complete cds 2619 11677 68% 0.0 95% KX838906.2 Select seq gb|KY014304.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds 2616 11648 68% 0.0 95% KY014304.1 Select seq dbj|LC190723.1| Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016 2616 11634 68% 0.0 95% LC190723.1 Select seq gb|KX922707.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL039U polyprotein gene, complete cds 2616 11625 68% 0.0 95% KX922707.1 Select seq gb|KU758869.1| Zika virus isolate 05211 polyprotein gene, partial cds 2616 3842 22% 0.0 95% KU758869.1 Select seq gb|KU758868.1| Zika virus isolate 27229 polyprotein gene, partial cds 2616 3812 22% 0.0 95% KU758868.1 Select seq gb|KY014316.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-039-URI polyprotein gene, complete cds 2612 11621 68% 0.0 95% KY014316.1 Select seq gb|KY014321.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds 2610 11632 68% 0.0 95% KY014321.1 Select seq gb|KY014300.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds 2610 11632 68% 0.0 95% KY014300.1 Select seq gb|KX197205.1| Zika virus isolate 9, complete genome 2610 11546 68% 0.0 95% KX197205.1 Select seq gb|KX694534.1| Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome 2610 11537 68% 0.0 95% KX694534.1 Select seq gb|KX673530.1| Zika virus isolate PHE_semen_Guadeloupe, complete genome 2610 11623 68% 0.0 95% KX673530.1 Select seq gb|KX447519.1| Zika virus isolate 1_0199_PF polyprotein gene, partial cds 2610 10212 60% 0.0 95% KX447519.1 Select seq gb|KX447513.1| Zika virus isolate 1_0134_PF polyprotein gene, complete cds 2610 11569 68% 0.0 95% KX447513.1 Select seq gb|KU758874.1| Zika virus isolate 20114 polyprotein gene, partial cds 2610 3812 22% 0.0 95% KU758874.1 Select seq gb|KX262887.1| Zika virus isolate 103451, complete genome 2610 11546 68% 0.0 95% KX262887.1 Select seq gb|KU940228.1| Zika virus isolate Bahia07, partial genome 2610 11564 68% 0.0 95% KU940228.1 Select seq gb|KU926309.1| Zika virus isolate Rio-U1, complete genome 2610 11549 68% 0.0 95% KU926309.1 Select seq gb|KU853013.1| Zika virus isolate Dominican Republic/2016/PD2, complete genome 2610 11641 68% 0.0 95% KU853013.1 Select seq gb|KU853012.1| Zika virus isolate Dominican Republic/2016/PD1, complete genome 2610 11636 68% 0.0 95% KU853012.1 Select seq gb|KY014301.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ107D1-URI polyprotein gene, complete cds 2608 11299 66% 0.0 95% KY014301.1 Select seq gb|KY014327.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds 2607 11520 68% 0.0 95% KY014327.1 Select seq gb|KY014314.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0436-SER polyprotein gene, complete cds 2607 11621 68% 0.0 95% KY014314.1 Select seq gb|KY014312.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME58-PLA polyprotein gene, complete cds 2607 11168 65% 0.0 95% KY014312.1 Select seq gb|KY014306.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME178-PLA polyprotein gene, complete cds 2607 11309 67% 0.0 95% KY014306.1 Select seq gb|KY014297.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds 2607 11538 68% 0.0 95% KY014297.1 Select seq gb|KX879604.1| Zika virus isolate SN089, complete genome 2607 11567 68% 0.0 95% KX879604.1 Select seq gb|KX879603.1| Zika virus isolate SN062, complete genome 2607 11555 68% 0.0 95% KX879603.1 Select seq gb|KX856011.1| Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome 2607 11526 68% 0.0 95% KX856011.1 Select seq gb|KX447521.1| Zika virus isolate 1_0080_PF polyprotein gene, partial cds 2607 9455 55% 0.0 95% KX447521.1 Select seq gb|KX447520.1| Zika virus isolate 1_0016_PF polyprotein gene, partial cds 2607 10557 62% 0.0 95% KX447520.1 Select seq gb|KX447518.1| Zika virus isolate 1_0117_PF polyprotein gene, partial cds 2607 10259 60% 0.0 95% KX447518.1 Select seq gb|KX447512.1| Zika virus isolate 1_0181_PF polyprotein gene, complete cds 2607 11569 68% 0.0 95% KX447512.1 Select seq gb|KX447511.1| Zika virus isolate 1_0015_PF polyprotein gene, complete cds 2607 11560 68% 0.0 95% KX447511.1 Select seq gb|KX447509.1| Zika virus isolate 1_0087_PF polyprotein gene, complete cds 2607 11566 68% 0.0 95% KX447509.1 Select seq gb|KX576684.1| Zika virus vector pZIKV-ICD, complete sequence 2607 11573 68% 0.0 95% KX576684.1 Select seq gb|KX520666.1| Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds 2607 11556 68% 0.0 95% KX520666.1 Select seq gb|KX446950.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome 2607 11524 68% 0.0 95% KX446950.1 Select seq gb|KU758871.1| Zika virus isolate 17170 polyprotein gene, partial cds 2607 3830 22% 0.0 95% KU758871.1 Select seq gb|KU758870.1| Zika virus isolate 17160 polyprotein gene, partial cds 2607 3830 22% 0.0 95% KU758870.1 Select seq gb|KX280026.1| Zika virus isolate Paraiba_01, complete genome 2607 11578 68% 0.0 95% KX280026.1 Select seq gb|KX247632.1| Zika virus isolate MEX_I_7 polyprotein gene, complete cds 2607 11535 68% 0.0 95% KX247632.1 Select seq gb|KU937936.1| Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds 2607 11524 68% 0.0 95% KU937936.1 Select seq gb|KX051563.1| Zika virus isolate Haiti/1/2016, complete genome 2607 11555 68% 0.0 95% KX051563.1 Select seq gb|KU991811.1| Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds 2607 11558 68% 0.0 95% KU991811.1 Select seq gb|KU312314.1| Zika virus isolate Z1106031 polyprotein gene, partial cds 2607 3830 22% 0.0 95% KU312314.1 Select seq gb|KY014315.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds 2603 11531 68% 0.0 95% KY014315.1 Select seq gb|KY014307.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ49D1-PLA polyprotein gene, complete cds 2601 11331 67% 0.0 95% KY014307.1 Select seq gb|KX811222.1| Zika virus isolate Brazil_2015_MG, complete genome 2601 11564 68% 0.0 95% KX811222.1 Select seq gb|KJ776791.2| Zika virus strain H/PF/2013, complete genome 2601 11560 68% 0.0 95% KJ776791.2 Select seq gb|KX447515.1| Zika virus isolate 1_0030_PF polyprotein gene, complete cds 2601 11558 68% 0.0 95% KX447515.1 Select seq gb|KX447514.1| Zika virus isolate 1_0035_PF polyprotein gene, complete cds 2601 11549 68% 0.0 95% KX447514.1 Select seq gb|KX447510.1| Zika virus isolate 1_0049_PF polyprotein gene, complete cds 2601 11562 68% 0.0 95% KX447510.1 Select seq gb|KX369547.1| Zika virus strain PF13/251013-18, complete genome 2601 11569 68% 0.0 95% KX369547.1 Select seq gb|KX446951.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome 2601 11529 68% 0.0 95% KX446951.1 Select seq gb|KU758877.1| Zika virus isolate 17271 polyprotein gene, complete cds 2601 11538 68% 0.0 95% KU758877.1 Select seq gb|KU758876.1| Zika virus isolate 21068 polyprotein gene, partial cds 2601 3810 22% 0.0 95% KU758876.1 Select seq gb|KU758873.1| Zika virus isolate 18246 polyprotein gene, partial cds 2601 3819 22% 0.0 95% KU758873.1 Select seq gb|KU509998.3| Zika virus strain Haiti/1225/2014, complete genome 2601 11567 68% 0.0 95% KU509998.3 Select seq gb|KU527068.1| Zika virus strain Natal RGN, complete genome 2601 11542 68% 0.0 95% KU527068.1 Select seq gb|KU501217.1| Zika virus strain 8375 polyprotein gene, complete cds 2601 11513 68% 0.0 95% KU501217.1 Select seq gb|KU501216.1| Zika virus strain 103344 polyprotein gene, complete cds 2601 11513 68% 0.0 95% KU501216.1 Select seq gb|KU365778.1| Zika virus strain BeH819015 polyprotein gene, complete cds 2601 11520 68% 0.0 95% KU365778.1 Select seq gb|KY014310.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME42-SER polyprotein gene, complete cds 2599 11270 66% 0.0 95% KY014310.1 Select seq gb|KY014323.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-02-MOS polyprotein gene, complete cds 2598 11611 68% 0.0 95% KY014323.1 Select seq gb|KY014317.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ28D1-URI polyprotein gene, complete cds 2598 11522 68% 0.0 95% KY014317.1 Select seq gb|KY014295.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds 2598 11623 68% 0.0 95% KY014295.1 Select seq gb|KX922706.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL038U polyprotein gene, complete cds 2598 11614 68% 0.0 95% KX922706.1 Select seq gb|KX922704.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL030U polyprotein gene, complete cds 2598 11616 68% 0.0 95% KX922704.1 Select seq gb|KX922703.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL021U polyprotein gene, complete cds 2598 11618 68% 0.0 95% KX922703.1 Select seq gb|KX842449.2| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds 2598 11623 68% 0.0 95% KX842449.2 Select seq gb|KX838905.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL02M polyprotein gene, complete cds 2598 11611 68% 0.0 95% KX838905.2 Select seq gb|KX766029.1| Zika virus isolate R116265, complete genome 2598 11504 68% 0.0 95% KX766029.1 Select seq gb|KX447516.1| Zika virus isolate 1_0111_PF polyprotein gene, complete cds 2598 11556 68% 0.0 95% KX447516.1 Select seq gb|KX266255.1| Zika virus isolate ZIKV_SMGC-1, complete genome 2598 11501 68% 0.0 95% KX266255.1 Select seq gb|KU866423.2| Zika virus isolate Zika virus/SZ01/2016/China polyprotein gene, complete cds 2598 11477 68% 0.0 95% KU866423.2 Select seq gb|KU926310.1| Zika virus isolate Rio-S1, complete genome 2598 11556 68% 0.0 95% KU926310.1 Select seq gb|KU729217.2| Zika virus isolate BeH823339 polyprotein gene, complete cds 2598 11575 68% 0.0 95% KU729217.2 Select seq gb|KU707826.1| Zika virus isolate SSABR1, complete genome 2598 11551 68% 0.0 95% KU707826.1 Select seq gb|KU365779.1| Zika virus strain BeH819966 polyprotein gene, complete cds 2598 11551 68% 0.0 95% KU365779.1 Select seq gb|KY014309.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ47D1-PLA polyprotein gene, partial cds 2594 11162 66% 0.0 95% KY014309.1 Select seq gb|KY014324.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-01-MOS polyprotein gene, complete cds 2592 11609 68% 0.0 95% KY014324.1 Select seq gb|KX806557.2| Zika virus isolate TS17-2016, complete genome 2592 11506 68% 0.0 95% KX806557.2 Select seq gb|KX838904.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL01M polyprotein gene, complete cds 2592 11611 68% 0.0 95% KX838904.2 Select seq gb|KX832731.1| Zika virus isolate ZIKV/Homo_sapiens/USA//2016/Hu0015SA polyprotein gene, complete cds 2592 11612 68% 0.0 95% KX832731.1 Select seq gb|KU758872.1| Zika virus isolate 01170 polyprotein gene, partial cds 2592 3810 22% 0.0 95% KU758872.1 Select seq gb|KX056898.1| Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds 2592 11486 68% 0.0 95% KX056898.1 Select seq gb|KU955590.1| Zika virus isolate Z16019 polyprotein gene, complete cds 2592 11515 68% 0.0 95% KU955590.1 Select seq gb|KU365780.1| Zika virus strain BeH815744 polyprotein gene, complete cds 2592 11544 68% 0.0 95% KU365780.1 Select seq gb|KU365777.1| Zika virus strain BeH818995 polyprotein gene, complete cds 2592 11538 68% 0.0 95% KU365777.1 Select seq gb|KU312312.1| Zika virus isolate Z1106033 polyprotein gene, complete cds 2592 11526 68% 0.0 95% KU312312.1 Select seq gb|KU758875.1| Zika virus isolate 15042 polyprotein gene, partial cds 2589 3806 22% 0.0 95% KU758875.1 Select seq gb|KY014296.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds 2574 11511 68% 0.0 94% KY014296.1 Select seq gb|KY014325.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-030-URI polyprotein gene, complete cds 1992 11291 66% 0.0 93% KY014325.1 Select seq gb|KY014311.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME50-PLA polyprotein gene, partial cds 1218 9206 55% 0.0 94% KY014311.1

FLSR036_M28_USA_2016-09-19 matches Sequences producing significant alignments: Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments Sequences producing significant alignments: Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession Select seq gb|KY014322.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-03-MOS polyprotein gene, complete cds 18512 18512 100% 0.0 99% KY014322.1 Select seq gb|KX838906.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL03M polyprotein gene, complete cds 18512 18512 100% 0.0 99% KX838906.2 Select seq gb|KX922705.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL032U polyprotein gene, complete cds 18500 18500 100% 0.0 99% KX922705.1 Select seq gb|KX922708.1| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL04M polyprotein gene, complete cds 18494 18494 100% 0.0 99% KX922708.1 Select seq gb|KY014299.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-04-MOS polyprotein gene, complete cds 18489 18489 100% 0.0 99% KY014299.1 Select seq gb|KY014304.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds 18462 18462 100% 0.0 99% KY014304.1 Select seq gb|KY014300.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds 18453 18453 100% 0.0 99% KY014300.1 Select seq gb|KX673530.1| Zika virus isolate PHE_semen_Guadeloupe, complete genome 18453 18453 100% 0.0 99% KX673530.1 Select seq gb|KU853013.1| Zika virus isolate Dominican Republic/2016/PD2, complete genome 18449 18449 100% 0.0 99% KU853013.1 Select seq gb|KU853012.1| Zika virus isolate Dominican Republic/2016/PD1, complete genome 18447 18447 100% 0.0 99% KU853012.1 Select seq gb|KY014295.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds 18444 18444 100% 0.0 99% KY014295.1 Select seq dbj|LC190723.1| Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016 18444 18444 100% 0.0 99% LC190723.1 Select seq gb|KX842449.2| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds 18444 18444 100% 0.0 99% KX842449.2 Select seq gb|KY014321.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds 18440 18440 100% 0.0 99% KY014321.1 Select seq gb|KY014323.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-02-MOS polyprotein gene, complete cds 18431 18431 100% 0.0 99% KY014323.1 Select seq gb|KX838905.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL02M polyprotein gene, complete cds 18431 18431 100% 0.0 99% KX838905.2 Select seq gb|KX832731.1| Zika virus isolate ZIKV/Homo_sapiens/USA//2016/Hu0015SA polyprotein gene, complete cds 18431 18431 100% 0.0 99% KX832731.1 Select seq gb|KX922703.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL021U polyprotein gene, complete cds 18429 18429 99% 0.0 99% KX922703.1 Select seq gb|KX922706.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL038U polyprotein gene, complete cds 18428 18428 100% 0.0 99% KX922706.1 Select seq gb|KX922707.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL039U polyprotein gene, complete cds 18426 18426 100% 0.0 99% KX922707.1 Select seq gb|KX922704.1| Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL030U polyprotein gene, complete cds 18426 18426 100% 0.0 99% KX922704.1 Select seq gb|KY014314.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0436-SER polyprotein gene, complete cds 18422 18422 100% 0.0 99% KY014314.1 Select seq gb|KX838904.2| Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL01M polyprotein gene, complete cds 18420 18420 100% 0.0 99% KX838904.2 Select seq gb|KY014316.1| Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-039-URI polyprotein gene, complete cds 18419 18419 100% 0.0 99% KY014316.1 Select seq gb|KY014324.1| Zika virus isolate Zika virus/A.aegypti-wt/USA/2016/FL-01-MOS polyprotein gene, complete cds 18417 18417 100% 0.0 99% KY014324.1 Select seq gb|KX447510.1| Zika virus isolate 1_0049_PF polyprotein gene, complete cds 18357 18357 99% 0.0 99% KX447510.1 Select seq gb|KX280026.1| Zika virus isolate Paraiba_01, complete genome 18354 18354 100% 0.0 99% KX280026.1 Select seq gb|KU509998.3| Zika virus strain Haiti/1225/2014, complete genome 18350 18350 100% 0.0 99% KU509998.3 Select seq gb|KX447512.1| Zika virus isolate 1_0181_PF polyprotein gene, complete cds 18348 18348 99% 0.0 99% KX447512.1 Select seq gb|KX369547.1| Zika virus strain PF13/251013-18, complete genome 18348 18348 99% 0.0 99% KX369547.1 Select seq gb|KU991811.1| Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds 18345 18345 100% 0.0 99% KU991811.1 Select seq gb|KU729217.2| Zika virus isolate BeH823339 polyprotein gene, complete cds 18345 18345 100% 0.0 99% KU729217.2 Select seq gb|KJ776791.2| Zika virus strain H/PF/2013, complete genome 18343 18343 99% 0.0 99% KJ776791.2 Select seq gb|KX447509.1| Zika virus isolate 1_0087_PF polyprotein gene, complete cds 18343 18343 99% 0.0 99% KX447509.1 Select seq gb|KX447513.1| Zika virus isolate 1_0134_PF polyprotein gene, complete cds 18339 18339 99% 0.0 99% KX447513.1 Select seq gb|KR872956.1| Zika virus strain 17829 polyprotein gene, complete cds 18336 18336 100% 0.0 99% KR872956.1 Select seq gb|KX811222.1| Zika virus isolate Brazil_2015_MG, complete genome 18336 18336 100% 0.0 99% KX811222.1 Select seq gb|KX197205.1| Zika virus isolate 9, complete genome 18336 18336 100% 0.0 99% KX197205.1 Select seq gb|KU321639.1| Zika virus strain ZikaSPH2015, complete genome 18336 18336 100% 0.0 99% KU321639.1 Select seq gb|KX447515.1| Zika virus isolate 1_0030_PF polyprotein gene, complete cds 18334 18334 99% 0.0 99% KX447515.1 Select seq gb|KX447511.1| Zika virus isolate 1_0015_PF polyprotein gene, complete cds 18334 18334 99% 0.0 99% KX447511.1 Select seq gb|KX051563.1| Zika virus isolate Haiti/1/2016, complete genome 18332 18332 100% 0.0 99% KX051563.1 Select seq gb|KX447514.1| Zika virus isolate 1_0035_PF polyprotein gene, complete cds 18330 18330 99% 0.0 99% KX447514.1 Select seq gb|KX879604.1| Zika virus isolate SN089, complete genome 18327 18327 100% 0.0 99% KX879604.1 Select seq gb|KU729218.1| Zika virus isolate BeH828305 polyprotein gene, complete cds 18327 18327 100% 0.0 99% KU729218.1 Select seq gb|KU527068.1| Zika virus strain Natal RGN, complete genome 18327 18327 100% 0.0 99% KU527068.1 Select seq gb|KX447516.1| Zika virus isolate 1_0111_PF polyprotein gene, complete cds 18325 18325 99% 0.0 99% KX447516.1 Select seq gb|KX262887.1| Zika virus isolate 103451, complete genome 18323 18323 100% 0.0 99% KX262887.1 Select seq gb|KX197192.1| Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome 18323 18323 100% 0.0 99% KX197192.1 Select seq gb|KU926310.1| Zika virus isolate Rio-S1, complete genome 18323 18323 100% 0.0 99% KU926310.1 Select seq gb|KU926309.1| Zika virus isolate Rio-U1, complete genome 18323 18323 100% 0.0 99% KU926309.1 Select seq gb|KU707826.1| Zika virus isolate SSABR1, complete genome 18323 18323 100% 0.0 99% KU707826.1 Select seq gb|KU365779.1| Zika virus strain BeH819966 polyprotein gene, complete cds 18323 18323 100% 0.0 99% KU365779.1 Select seq gb|KY014303.1| Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds 18318 18318 100% 0.0 99% KY014303.1 Select seq gb|KX879603.1| Zika virus isolate SN062, complete genome 18318 18318 100% 0.0 99% KX879603.1 Select seq gb|KX694534.1| Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome 18314 18314 100% 0.0 99% KX694534.1 Select seq gb|KX198135.1| Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome 18314 18314 100% 0.0 99% KX198135.1 Select seq gb|KU940228.1| Zika virus isolate Bahia07, partial genome 18314 18314 100% 0.0 99% KU940228.1 Select seq gb|KU365780.1| Zika virus strain BeH815744 polyprotein gene, complete cds 18314 18314 100% 0.0 99% KU365780.1 Select seq gb|KU647676.1| Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds 18309 18309 100% 0.0 99% KU647676.1 Select seq gb|KU758877.1| Zika virus isolate 17271 polyprotein gene, complete cds 18305 18305 100% 0.0 99% KU758877.1 Select seq gb|KX247646.1| Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome 18305 18305 100% 0.0 99% KX247646.1 Select seq gb|KX247632.1| Zika virus isolate MEX_I_7 polyprotein gene, complete cds 18305 18305 100% 0.0 99% KX247632.1 Select seq gb|KX156776.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome 18305 18305 100% 0.0 99% KX156776.1 Select seq gb|KU365777.1| Zika virus strain BeH818995 polyprotein gene, complete cds 18305 18305 100% 0.0 99% KU365777.1 Select seq gb|KY014297.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds 18303 18303 100% 0.0 99% KY014297.1 Select seq gb|KX447517.1| Zika virus isolate 1_0038_PF polyprotein gene, complete cds 18303 18303 99% 0.0 99% KX447517.1 Select seq gb|KX446950.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome 18300 18300 100% 0.0 99% KX446950.1 Select seq gb|KX156774.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome 18300 18300 100% 0.0 99% KX156774.1 Select seq gb|KU497555.1| Zika virus isolate Brazil-ZKV2015, complete genome 18300 18300 100% 0.0 99% KU497555.1 Select seq gb|KY014327.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds 18298 18298 100% 0.0 99% KY014327.1 Select seq gb|KX856011.1| Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome 18296 18296 100% 0.0 99% KX856011.1 Select seq gb|KU820897.5| Zika virus isolate FLR polyprotein gene, complete cds 18296 18296 100% 0.0 99% KU820897.5 Select seq gb|KX520666.1| Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds 18296 18296 100% 0.0 99% KX520666.1 Select seq gb|KX446951.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome 18296 18296 100% 0.0 99% KX446951.1 Select seq gb|KX156775.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome 18296 18296 100% 0.0 99% KX156775.1 Select seq gb|KX087102.1| Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome 18296 18296 100% 0.0 99% KX087102.1 Select seq gb|KU501215.1| Zika virus strain PRVABC59, complete genome 18296 18296 100% 0.0 99% KU501215.1 Select seq gb|KU365778.1| Zika virus strain BeH819015 polyprotein gene, complete cds 18296 18296 100% 0.0 99% KU365778.1 Select seq gb|KU312312.1| Zika virus isolate Z1106033 polyprotein gene, complete cds 18296 18296 100% 0.0 99% KU312312.1 Select seq gb|KY014315.1| Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds 18292 18292 100% 0.0 99% KY014315.1 Select seq gb|KX601168.1| Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome 18291 18291 100% 0.0 99% KX601168.1 Select seq gb|KX087101.2| Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome 18291 18291 100% 0.0 99% KX087101.2 Select seq gb|KU922960.1| Zika virus isolate MEX/InDRE/Sm/2016, complete genome 18291 18291 100% 0.0 99% KU922960.1 Select seq gb|KU501217.1| Zika virus strain 8375 polyprotein gene, complete cds 18291 18291 99% 0.0 99% KU501217.1 Select seq gb|KY014296.1| Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds 18287 18287 100% 0.0 99% KY014296.1 Select seq gb|KX548902.1| Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds 18287 18287 100% 0.0 99% KX548902.1 Select seq gb|KX377337.1| Zika virus strain PRVABC-59, complete genome 18287 18287 100% 0.0 99% KX377337.1 Select seq gb|KU937936.1| Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds 18287 18287 100% 0.0 99% KU937936.1 Select seq gb|KU922923.1| Zika virus isolate MEX/InDRE/Lm/2016, complete genome 18287 18287 100% 0.0 99% KU922923.1 Select seq gb|KX806557.2| Zika virus isolate TS17-2016, complete genome 18285 18285 99% 0.0 99% KX806557.2 Select seq gb|KU501216.1| Zika virus strain 103344 polyprotein gene, complete cds 18285 18285 99% 0.0 99% KU501216.1 Select seq gb|KX893855.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome 18282 18282 100% 0.0 99% KX893855.1 Select seq gb|KU870645.1| Zika virus isolate FB-GWUH-2016, complete genome 18282 18282 100% 0.0 99% KU870645.1 Select seq gb|KX766029.1| Zika virus isolate R116265, complete genome 18278 18278 100% 0.0 99% KX766029.1 Select seq gb|KX702400.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome 18278 18278 100% 0.0 99% KX702400.1 Select seq gb|KU955590.1| Zika virus isolate Z16019 polyprotein gene, complete cds 18264 18264 100% 0.0 99% KU955590.1 Select seq gb|KX766028.1| Zika virus isolate R114916, complete genome 18262 18262 100% 0.0 99% KX766028.1 Select seq gb|KU740184.2| Zika virus isolate GD01 polyprotein gene, complete cds 18260 18260 100% 0.0 99% KU740184.2 Select seq gb|KU761564.1| Zika virus isolate GDZ16001 polyprotein gene, complete cds 18260 18260 100% 0.0 99% KU761564.1

USAMRIID has released additional recent Zika sequences from Florida. https://github.com/jtladner/ZIKA_Florida/tree/master/sequences

ACTIVE INVESTIGATIONS Information on Active Investigations When a local case of Zika virus is confirmed through laboratory testing, the department conducts a thorough investigation around the case to determine if additional people are infected. The department interviews and tests close contacts and community members around the case. Knowing if additional people are infected helps the department determine if there is a zone where mosquitoes are transmitting the virus. Not every case results in a designation of active transmission in an area. In some instances, a case of Zika is an isolated incident with no additional people infected. For more information on the department’s testing and investigation process, click here. paragraph break Current Number of Active Investigations: 13 Miami-Dade County: 8 open investigations Palm Beach: 1 open investigations Unknown: 4 open investigations *Note: Exposure occurred in Miami Beach and overseas in an area with widespread transmission of Zika. paragraph break Current Number of Closed Investigations: 34 Miami-Dade County: 27 closed investigations Palm Beach County: 5 closed investigation Broward County: 1 closed investigation Pinellas: 1 closed investigation paragraph break Sampling Activities For Active Investigations Miami Beach in Miami-Dade County (Area of Active Transmission) Total # of Samples Collected Positive Negative Pending Results 1,064 72 992 0 paragraph break One-square mile area within NW 79th St. to the North, NW 63rd St. to the South, NW 10th Ave. to the West and N. Miami Ave. to the East in Miami-Dade County (Area of Active Transmission) Total # of Samples Collected Positive Negative Pending Results 117 8 108 1 paragraph break Palm Beach County – 1 Investigation Total # of Samples Collected Positive Negative Pending Results 0 0 0 0 paragraph break Miami-Dade Investigations Outside of Areas of Active Transmission – 6 Investigations Total # of Samples Collected Positive Negative Pending Results 30 0 29 1 paragraph break Wynwood Area in Miami-Dade County – Note: This investigation is closed, but the department is providing the sampling results below for reference. Total # of Samples Collected Positive Negative Pending Results 525 33 491 0 Data as of Nov. 4, 2016 - 4:38 PM ET

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=25.902821010040086%2C-80.35703105332033&z=11

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=26.674192050093335%2C-80.24510783554689&z=11

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=39.74122697365135%2C-79.0326919433594&z=8

As of Thursday, November 3, 2016*, VDH has reported 91 cases of Zika virus disease in Virginia residents to the CDC ( 15 in Central Region, 10 in Eastern Region, 12 in Northwest Region, 45 in Northern Region and 9 in Southwest Region). All Virginia cases are associated with travel to a Zika-affected area. CDC has issued a travel alert (Level 2-Practice Enhanced Precautions) for people traveling to regions and certain countries where Zika virus transmission is ongoing. *After the November 3, 2016 weekly update, this information will be updated monthly (by the 7th of each month). The next update will be posted by December 7 and will contain data through November. http://www.vdh.virginia.gov/zika/zika-virus-update/

As of Thursday, November 3, 2016*, VDH has reported 91 cases of Zika virus disease in Virginia residents to the CDC ( 15 in Central Region, 10 in Eastern Region, 12 in Northwest Region, 45 in Northern Region and 9 in Southwest Region). All Virginia cases are associated with travel to a Zika-affected area. CDC has issued a travel alert (Level 2-Practice Enhanced Precautions) for people traveling to regions and certain countries where Zika virus transmission is ongoing. *After the November 3, 2016 weekly update, this information will be updated monthly (by the 7th of each month). The next update will be posted by December 7 and will contain data through November.

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=25.89197907130294%2C-80.4499282714844&z=10

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=28.417333539192583%2C-81.1036147949219&z=10

November 4, 2016 Department of Health Daily Zika Update Contact: Communications [email protected] (850) 245-4111 Tallahassee, Fla.—In an effort to keep Florida residents and visitors safe and aware about the status of the Zika virus, the department will issue a Zika virus update each week day. Updates will include a Zika case count by county and information to keep Floridians informed and prepared. In order to keep the public informed, the department has posted our investigation process here. There are five new travel related cases today with one in Miami-Dade County, one in Indian River County, one in Palm Beach County and two involving pregnant women. This is Indian River’s first travel-related case and the Declaration of Public Health Emergency has been amended to include the county. Please visit our website to see the full list of travel-related cases. There are two new non-travel related cases today. Both are Miami-Dade County residents and the department is investigating to determine where exposure occurred. There is one additional out-of-state case. The department is investigating to determine where exposure occurred. DOH continues door-to-door outreach and targeted testing in Miami-Dade County and mosquito abatement and reduction activities are also taking place around the locations that are being investigated. DOH believes ongoing transmission is only taking place within the identified areas in Miami-Dade County. One case does not mean ongoing active transmission is taking place. DOH conducts a thorough investigation by sampling close contacts and community members around each case to determine if additional people are infected. If DOH finds evidence that active transmission is occurring in an area, the media and the public will be notified. For a complete breakdown of non-travel and travel-related Zika infections to-date, please see below. Infection Type Infection Count Travel-Related Infections of Zika 779 Non-Travel Related Infections of Zika 190 Infections Involving Pregnant Women 133 Out of State Cases (not Florida Residents) 20 Undetermined 6 Total 1,128 The timelines below are as of Nov. 4 and will be updated every Friday. Note: Asymptomatic cases are not reflected as they do not have symptom on-set dates. click image above to enlarge click image above to enlarge click image above to enlarge The department is currently conducting 13 active investigations. The department has closed 34 investigations. Information regarding the investigations can be found here. If investigations reveal additional areas of active transmission, the department will announce a defined area of concern. The department has conducted Zika virus testing for more than 9,986 people statewide. Florida currently has the capacity to test 7,448 people for active Zika virus and 5.993 for Zika antibodies. At Governor Scott’s direction, all county health departments offer free Zika risk assessment and testing to pregnant women. Florida’s small case clusters is not considered widespread transmission, however, pregnant women are advised to avoid non-essential travel to the impacted areas in Miami-Dade County (see maps below). If you are pregnant and must travel or if you live or work in the impacted area, protect yourself from mosquito bites by wearing insect repellent, long clothing and limiting your time outdoors. According to CDC guidance, providers should consider testing all pregnant women with a history of travel to a Zika affected area for the virus. It is also recommended that all pregnant women who reside in or travel frequently to the area where active transmission is likely occurring be tested for Zika in the first and second trimester. Pregnant women in the identified area can contact their medical provider or their local county health department to be tested and receive a Zika prevention kit. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Additionally, the department is working closely with the Healthy Start Coalition of Miami-Dade County to identify pregnant women in the impacted areas to ensure they have access to resources and information to protect themselves. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Pregnant women can contact their local county health department for Zika risk assessment and testing hours and information. A Zika risk assessment will be conducted by county health department staff and blood and/or urine samples may be collected and sent to labs for testing. It may take one to two weeks to receive results. Florida has been monitoring pregnant women with evidence of Zika regardless of symptoms. The total number of pregnant women who have been or are being monitored is 133. On Feb. 12, Governor Scott directed the State Surgeon General to activate a Zika Virus Information Hotline for current Florida residents and visitors, as well as anyone planning on traveling to Florida in the near future. The hotline, managed by the Department of Health, has assisted more than 7,078 callers since it launched. The number for the Zika Virus Information Hotline is 1-855-622-6735. The department urges Floridians to drain standing water weekly, no matter how seemingly small. A couple drops of water in a bottle cap can be a breeding location for mosquitoes. Residents and visitors also need to use repellents when enjoying the Florida outdoors. For more information on DOH action and federal guidance, please click here. For resources and information on Zika virus, click here. click image above to enlarge click image above to enlarge About the Florida Department of Health The department, nationally accredited by the Public Health Accreditation Board, works to protect, promote, and improve the health of all people in Florida through integrated state, county and community efforts. Follow us on Twitter at @HealthyFla and on Facebook. For more information about the Florida Department of Health, please visit www.FloridaHealth.gov.

November 4, 2016 Department of Health Daily Zika Update Contact: Communications [email protected] (850) 245-4111 Tallahassee, Fla.—In an effort to keep Florida residents and visitors safe and aware about the status of the Zika virus, the department will issue a Zika virus update each week day. Updates will include a Zika case count by county and information to keep Floridians informed and prepared. In order to keep the public informed, the department has posted our investigation process here. There are five new travel related cases today with one in Miami-Dade County, one in Indian River County, one in Palm Beach County and two involving pregnant women. This is Indian River’s first travel-related case and the Declaration of Public Health Emergency has been amended to include the county. Please visit our website to see the full list of travel-related cases. There are two new non-travel related cases today. Both are Miami-Dade County residents and the department is investigating to determine where exposure occurred. There is one additional out-of-state case. The department is investigating to determine where exposure occurred. DOH continues door-to-door outreach and targeted testing in Miami-Dade County and mosquito abatement and reduction activities are also taking place around the locations that are being investigated. DOH believes ongoing transmission is only taking place within the identified areas in Miami-Dade County. One case does not mean ongoing active transmission is taking place. DOH conducts a thorough investigation by sampling close contacts and community members around each case to determine if additional people are infected. If DOH finds evidence that active transmission is occurring in an area, the media and the public will be notified. For a complete breakdown of non-travel and travel-related Zika infections to-date, please see below. Infection Type Infection Count Travel-Related Infections of Zika 779 Non-Travel Related Infections of Zika 190 Infections Involving Pregnant Women 133 Out of State Cases (not Florida Residents) 20 Undetermined 6 Total 1,128 The timelines below are as of Nov. 4 and will be updated every Friday. Note: Asymptomatic cases are not reflected as they do not have symptom on-set dates. click image above to enlarge click image above to enlarge click image above to enlarge The department is currently conducting 13 active investigations. The department has closed 34 investigations. Information regarding the investigations can be found here. If investigations reveal additional areas of active transmission, the department will announce a defined area of concern. The department has conducted Zika virus testing for more than 9,986 people statewide. Florida currently has the capacity to test 7,448 people for active Zika virus and 5.993 for Zika antibodies. At Governor Scott’s direction, all county health departments offer free Zika risk assessment and testing to pregnant women. Florida’s small case clusters is not considered widespread transmission, however, pregnant women are advised to avoid non-essential travel to the impacted areas in Miami-Dade County (see maps below). If you are pregnant and must travel or if you live or work in the impacted area, protect yourself from mosquito bites by wearing insect repellent, long clothing and limiting your time outdoors. According to CDC guidance, providers should consider testing all pregnant women with a history of travel to a Zika affected area for the virus. It is also recommended that all pregnant women who reside in or travel frequently to the area where active transmission is likely occurring be tested for Zika in the first and second trimester. Pregnant women in the identified area can contact their medical provider or their local county health department to be tested and receive a Zika prevention kit. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Additionally, the department is working closely with the Healthy Start Coalition of Miami-Dade County to identify pregnant women in the impacted areas to ensure they have access to resources and information to protect themselves. CDC recommends that a pregnant woman with a history of Zika virus and her provider should consider additional ultrasounds. Pregnant women can contact their local county health department for Zika risk assessment and testing hours and information. A Zika risk assessment will be conducted by county health department staff and blood and/or urine samples may be collected and sent to labs for testing. It may take one to two weeks to receive results. Florida has been monitoring pregnant women with evidence of Zika regardless of symptoms. The total number of pregnant women who have been or are being monitored is 133. On Feb. 12, Governor Scott directed the State Surgeon General to activate a Zika Virus Information Hotline for current Florida residents and visitors, as well as anyone planning on traveling to Florida in the near future. The hotline, managed by the Department of Health, has assisted more than 7,078 callers since it launched. The number for the Zika Virus Information Hotline is 1-855-622-6735. The department urges Floridians to drain standing water weekly, no matter how seemingly small. A couple drops of water in a bottle cap can be a breeding location for mosquitoes. Residents and visitors also need to use repellents when enjoying the Florida outdoors. For more information on DOH action and federal guidance, please click here. For resources and information on Zika virus, click here. click image above to enlarge click image above to enlarge About the Florida Department of Health The department, nationally accredited by the Public Health Accreditation Board, works to protect, promote, and improve the health of all people in Florida through integrated state, county and community efforts. Follow us on Twitter at @HealthyFla and on Facebook. For more information about the Florida Department of Health, please visit www.FloridaHealth.gov.

There are two new non-travel related cases today. Both are Miami-Dade County residents and the department is investigating to determine where exposure occurred. There is one additional out-of-state case. The department is investigating to determine where exposure occurred.

There are five new travel related cases today with one in Miami-Dade County, one in Indian River County, one in Palm Beach County and two involving pregnant women. This is Indian River’s first travel-related case and the Declaration of Public Health Emergency has been amended to include the county. Please visit our website to see the full list of travel-related cases. There are two new non-travel related cases today. Both are Miami-Dade County residents and the department is investigating to determine where exposure occurred. There is one additional out-of-state case. The department is investigating to determine where exposure occurred.

Infection Type Infection Count Travel-Related Infections of Zika 779 Non-Travel Related Infections of Zika 190 Infections Involving Pregnant Women 133 Out of State Cases (not Florida Residents) 20 Undetermined 6 Total 1,128 http://www.floridahealth.gov/newsroom/2016/11/110416-zika-update.html

Infection Type Infection Count Travel-Related Infections of Zika 779 Non-Travel Related Infections of Zika 190 Infections Involving Pregnant Women 133 Out of State Cases (not Florida Residents) 20 Undetermined 6 Total 1,128 http://www.floridahealth.gov/newsroom/2016/11/110416-zika-update.html

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=40.505578811360905%2C-94.01257628007824&z=7

Laboratory-confirmed Zika virus disease cases reported to ArboNET by state or territory — United States, 2015–2016 (as of November 2, 2016)§ States Travel-associated cases* No. (% of cases in states) (N=3,989) Locally acquired cases† No. (% of cases in states) (N=139) Alabama 28 (1) 0 (0) Arizona 42 (1) 0 (0) Arkansas 13 (<1) 0 (0) California 312 (8) 0 (0) Colorado 46 (1) 0 (0) Connecticut 58 (1) 0 (0) Delaware 16 (<1) 0 (0) District of Columbia 25 (1) 0 (0) Florida 708 (18) 139 (100) Georgia 96 (2) 0 (0) Hawaii 14 (<1) 0 (0) Idaho 4 (<1) 0 (0) Illinois 76 (2) 0 (0) Indiana 45 (1) 0 (0) Iowa 17 (<1) 0 (0) Kansas 17 (<1) 0 (0) Kentucky 24 (1) 0 (0) Louisiana 34 (1) 0 (0) Maine 11 (<1) 0 (0) Maryland 107 (3) 0 (0) Massachusetts 97 (2) 0 (0) Michigan 62 (2) 0 (0) Minnesota 53 (1) 0 (0) Mississippi 23 (1) 0 (0) Missouri 34 (1) 0 (0) http://www.cdc.gov/zika/geo/united-states.html

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=46.51637046290647%2C-94.61682436445318&z=7

Laboratory-confirmed Zika virus disease cases reported to ArboNET by state or territory — United States, 2015–2016 (as of November 2, 2016)§ States Travel-associated cases* No. (% of cases in states) (N=3,989) Locally acquired cases† No. (% of cases in states) (N=139) Alabama 28 (1) 0 (0) Arizona 42 (1) 0 (0) Arkansas 13 (<1) 0 (0) California 312 (8) 0 (0) Colorado 46 (1) 0 (0) Connecticut 58 (1) 0 (0) Delaware 16 (<1) 0 (0) District of Columbia 25 (1) 0 (0) Florida 708 (18) 139 (100) Georgia 96 (2) 0 (0) Hawaii 14 (<1) 0 (0) Idaho 4 (<1) 0 (0) Illinois 76 (2) 0 (0) Indiana 45 (1) 0 (0) Iowa 17 (<1) 0 (0) Kansas 17 (<1) 0 (0) Kentucky 24 (1) 0 (0) Louisiana 34 (1) 0 (0) Maine 11 (<1) 0 (0) Maryland 107 (3) 0 (0) Massachusetts 97 (2) 0 (0) Michigan 62 (2) 0 (0) Minnesota 53 (1) 0 (0) http://www.cdc.gov/zika/geo/united-states.html

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1FlIB7hHnVgGD9TlbSx5HwAj-PEQ&ll=39.53899297325083%2C-97.37439268632818&z=7