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niman

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  1. niman
    July 2015 – June 2016 Total birds sampled by flyway Last Updated: 10/30/2015 Total birds sampled: 19,654 Total HPAI positive cases: 1 Atlantic: 4,968 Mississippi: 6,757 Central: 3,433 Pacific: 4,474 American Oceania f : 22
  2. niman
    APHIS H5 testing through October 30 increases to 19,654. https://www.aphis.usda.gov/wildlife_damage/downloads/JULY 2015 - JUNE 2016 WILD BIRD POSITIVE HIGHLY PATHOGENIC AVIAN INFLUENZA CASES IN THE UNITED STATES.pdf
  3. niman
    July 2015 – June 2016 Last Updated: 10/23/2015 Total birds sampled: 17,898 Total HPAI positive cases: 1 Total birds sampled by flyway Atlantic: 4,661 Mississippi: 6,077 Central: 3,302 Pacific: 3,836 American Oceania f : 22
  4. niman
    Number of wild birds APHIS H5 tested in 2015/2016 increases to 17.898. https://www.aphis.usda.gov/wildlife_damage/downloads/JULY 2015 - JUNE 2016 WILD BIRD POSITIVE HIGHLY PATHOGENIC AVIAN INFLUENZA CASES IN THE UNITED STATES.pdf
  5. niman
    December 2014 – June 2015 Last Updated: 10/23/2015 Total birds sampled by flyway Total birds sampled: 7,084 Total HPAI positive cases: 101 Atlantic: 1,000 Mississippi: 2,079 Central: 539 Pacific: 3,374 American Oceania f : 92
  6. niman
    APHIS increased Fujian H5 positives in 2014/2015 from 100 to 101. https://www.aphis.usda.gov/wildlife_damage/downloads/DEC 2014 - JUNE 2015 WILD BIRD POSITIVE HIGHLY PATHOGENIC AVIAN INFLUENZA CASES IN THE UNITED STATES.pdf
  7. niman
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3142.30.000000e+001703/1704 (99%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3066.60.000000e+001689/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3055.50.000000e+001684/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001660/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3013.00.000000e+001659/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3011.20.000000e+001659/1674 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)3009.30.000000e+001657/1671 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001658/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001676/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2989.00.000000e+001675/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2983.50.000000e+001674/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2981.60.000000e+001672/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2977.90.000000e+001631/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001670/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2961.30.000000e+001627/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001670/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1703 (98%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)
  8. niman
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3142.30.000000e+001703/1704 (99%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3066.60.000000e+001689/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3055.50.000000e+001684/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001660/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3013.00.000000e+001659/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3011.20.000000e+001659/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001658/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001655/1671 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001676/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2989.00.000000e+001675/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2983.50.000000e+001674/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2981.60.000000e+001672/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2977.90.000000e+001631/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001670/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2961.30.000000e+001627/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001670/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1703 (98%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)
  9. niman
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3136.70.000000e+001702/1704 (99%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3061.00.000000e+001688/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3049.90.000000e+001683/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3011.20.000000e+001659/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3007.50.000000e+001658/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3005.60.000000e+001658/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001657/1674 (98%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)2994.50.000000e+001645/1657 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)2994.50.000000e+001649/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)2992.70.000000e+001654/1671 (98%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001675/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2983.50.000000e+001674/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2977.90.000000e+001673/1704 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001671/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2972.40.000000e+001630/1640 (99%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2966.80.000000e+001628/1639 (99%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001668/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2957.60.000000e+001669/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2957.60.000000e+001669/1703 (98%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001669/1704 (97%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001668/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001668/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001668/1703 (97%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)
  10. niman
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3049.90.000000e+001686/1704 (98%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3038.90.000000e+001681/1699 (98%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3000.10.000000e+001657/1674 (98%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)2996.40.000000e+001656/1673 (98%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)2994.50.000000e+001656/1674 (98%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)2987.20.000000e+001655/1674 (98%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001673/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)2983.50.000000e+001647/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)2983.50.000000e+001647/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)2981.60.000000e+001652/1671 (98%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2981.60.000000e+001673/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2972.40.000000e+001672/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2966.80.000000e+001671/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2961.30.000000e+001628/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001667/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2948.40.000000e+001626/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2948.40.000000e+001626/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001666/1701 (97%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2946.50.000000e+001667/1703 (97%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2946.50.000000e+001667/1703 (97%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2944.70.000000e+001624/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2944.70.000000e+001667/1704 (97%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2944.70.000000e+001666/1702 (97%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2944.70.000000e+001666/1702 (97%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2944.70.000000e+001666/1703 (97%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2942.80.000000e+001625/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2942.80.000000e+001625/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2942.80.000000e+001625/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)
  11. niman
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3110.90.000000e+001697/1704 (99%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3109.00.000000e+001695/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3109.00.000000e+001695/1701 (99%)EPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3099.80.000000e+001692/1699 (99%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3098.00.000000e+001695/1704 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3098.00.000000e+001693/1701 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3057.30.000000e+001667/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3055.50.000000e+001667/1674 (99%)EPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3048.10.000000e+001666/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3044.40.000000e+001658/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3044.40.000000e+001658/1663 (99%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)3044.40.000000e+001685/1704 (98%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)3042.60.000000e+001684/1702 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3038.90.000000e+001664/1674 (99%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)3031.50.000000e+001661/1671 (99%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)3027.80.000000e+001682/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)3025.90.000000e+001683/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)3020.40.000000e+001682/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)3020.40.000000e+001682/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)3020.40.000000e+001682/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)3020.40.000000e+001682/1705 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)3016.70.000000e+001679/1702 (98%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001681/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001681/1705 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)3011.20.000000e+001678/1703 (98%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)3009.30.000000e+001637/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)3009.30.000000e+001680/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)3009.30.000000e+001680/1705 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)3007.50.000000e+001678/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)3007.50.000000e+001678/1703 (98%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)3005.60.000000e+001678/1704 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)3005.60.000000e+001677/1702 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)3003.80.000000e+001636/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)3003.80.000000e+001636/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)3003.80.000000e+001636/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001635/1641 (99%)EPI597813A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI537618A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)
  12. niman
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3122.00.000000e+001699/1704 (99%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3120.10.000000e+001699/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3120.10.000000e+001697/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3120.10.000000e+001697/1701 (99%)EPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3114.60.000000e+001696/1701 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3114.60.000000e+001696/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3110.90.000000e+001694/1699 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3109.00.000000e+001695/1701 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3098.00.000000e+001695/1704 (99%)EPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3068.40.000000e+001669/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3066.60.000000e+001669/1674 (99%)EPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001668/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3055.50.000000e+001660/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3055.50.000000e+001660/1663 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)3053.60.000000e+001686/1702 (99%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3049.90.000000e+001666/1674 (99%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)3044.40.000000e+001685/1704 (98%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001663/1671 (99%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)3038.90.000000e+001684/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001685/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)3031.50.000000e+001684/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)3031.50.000000e+001684/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)3031.50.000000e+001684/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)3031.50.000000e+001684/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)3025.90.000000e+001640/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)3025.90.000000e+001640/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)3025.90.000000e+001640/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)3025.90.000000e+001683/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)3020.40.000000e+001639/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001682/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)3020.40.000000e+001682/1705 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)3018.50.000000e+001680/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)3018.50.000000e+001680/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001637/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)3016.70.000000e+001680/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)3016.70.000000e+001679/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)3016.70.000000e+001679/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)3016.70.000000e+001679/1703 (98%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)3014.90.000000e+001638/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)3014.90.000000e+001681/1705 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)3014.90.000000e+001681/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001681/1705 (98%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)3009.30.000000e+001637/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)3009.30.000000e+001637/1641 (99%)
  13. niman
    DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3131.20.000000e+001701/1704 (99%)EPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3110.90.000000e+001697/1704 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3109.00.000000e+001695/1701 (99%)EPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3099.80.000000e+001692/1699 (99%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3098.00.000000e+001695/1704 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3098.00.000000e+001693/1701 (99%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3086.90.000000e+001691/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3057.30.000000e+001667/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3055.50.000000e+001667/1674 (99%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3044.40.000000e+001658/1663 (99%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3038.90.000000e+001664/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001664/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)3037.00.000000e+001683/1702 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3033.30.000000e+001656/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)3031.50.000000e+001661/1671 (99%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)3022.20.000000e+001681/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)3016.70.000000e+001680/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)3014.90.000000e+001681/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)3009.30.000000e+001680/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)3009.30.000000e+001680/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)3009.30.000000e+001680/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)3009.30.000000e+001680/1705 (98%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001679/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)3000.10.000000e+001635/1640 (99%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001635/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001635/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001635/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2996.40.000000e+001676/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2996.40.000000e+001676/1703 (98%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2994.50.000000e+001676/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2994.50.000000e+001675/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2994.50.000000e+001675/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2994.50.000000e+001675/1703 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2992.70.000000e+001634/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2992.70.000000e+001634/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2989.00.000000e+001632/1639 (99%)
  14. niman
    AlignSegment-IDNameScoreE-ValueIdentityEPI669128A/turkey/Israel/658/2015 (A/H5N1) segment 4 (HA)3147.80.000000e+001704/1704 (100%)EPI669130A/turkey/Israel/633/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI669131A/turkey/Israel/14/2015 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI669127A/duck/Gaza/552/2015 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3086.90.000000e+001693/1704 (99%)EPI669129A/chicken/Qatanna/468/2015 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3077.60.000000e+001691/1704 (99%)EPI669125A/chicken/Gaza/797/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI669126A/duck/Gaza/872/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669123A/chicken/Gaza/803/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669122A/duck/Gaza/829/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI669121A/chicken/Gaza/869/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3066.60.000000e+001686/1699 (99%)EPI669124A/chicken/Gaza/799/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI669120A/chicken/Gaza/870/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI669119A/chicken/Gaza/876/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3024.10.000000e+001661/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3022.20.000000e+001661/1674 (99%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001660/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3014.90.000000e+001660/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)3014.90.000000e+001679/1702 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3011.20.000000e+001652/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3011.20.000000e+001652/1663 (99%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)3000.10.000000e+001677/1704 (98%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001655/1671 (99%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2994.50.000000e+001676/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001674/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001672/1701 (98%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2977.90.000000e+001631/1640 (99%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001671/1701 (98%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2974.20.000000e+001672/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2974.20.000000e+001672/1703 (98%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2972.40.000000e+001672/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2972.40.000000e+001671/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2972.40.000000e+001671/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2972.40.000000e+001671/1703 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2966.80.000000e+001628/1639 (99%)
  15. niman
    AlignSegment-IDNameScoreE-ValueIdentityEPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3125.70.000000e+001700/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3092.40.000000e+001694/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3086.90.000000e+001691/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3083.20.000000e+001692/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3072.10.000000e+001687/1699 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3029.60.000000e+001662/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3027.80.000000e+001662/1674 (99%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3022.20.000000e+001661/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3020.40.000000e+001661/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3016.70.000000e+001653/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3016.70.000000e+001653/1663 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)3014.90.000000e+001679/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)3009.30.000000e+001679/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)3005.60.000000e+001678/1704 (98%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)3003.80.000000e+001656/1671 (99%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)3003.80.000000e+001678/1704 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)3000.10.000000e+001677/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001678/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2994.50.000000e+001634/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2987.20.000000e+001633/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2987.20.000000e+001633/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2987.20.000000e+001633/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001673/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2981.60.000000e+001632/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2981.60.000000e+001632/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001672/1701 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2979.80.000000e+001673/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2979.80.000000e+001673/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2977.90.000000e+001630/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2977.90.000000e+001673/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2977.90.000000e+001672/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2977.90.000000e+001672/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2977.90.000000e+001672/1703 (98%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI597813A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI537618A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI373012A/Egypt/N04286/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372875A/Egypt/N0677/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI340165A/duck/Egypt/10228SF/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340154A/duck/Egypt/10118/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI340141A/chicken/Egypt/112SG/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340131A/chicken/Egypt/1117/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340122A/chicken/Egypt/1128/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340107A/chicken/Egypt/11184S/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI340102A/chicken/Egypt/1134SD/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340091A/duck/Egypt/11117SS/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI373017A/Egypt/N05860/2011 (A/H5N1) segment 4 (HA)2966.80.000000e+001671/1704 (98%)EPI348151A/chicken/Egypt/11VIR4453-270/2010 (A/H5N1) segment 4 (HA)2966.80.000000e+001667/1698 (98%)EPI340118A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 4 (HA)2966.80.000000e+001674/1707 (98%)EPI597828A/goose/Egypt/1439FAOS/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597811A/duck/Egypt/141AI/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI537617A/Egypt/N01753/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001670/1703 (98%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI393783A/Egypt/N00951/2012 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI373015A/Egypt/N04284/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372851A/Egypt/N0544/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340126A/chicken/Egypt/112AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340124A/chicken/Egypt/114AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340123A/chicken/Egypt/115AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340121A/chicken/Egypt/1146SF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340119A/duck/Egypt/1148SF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340100A/duck/Egypt/11211S/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340094A/duck/Egypt/1116AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI338614A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI338609A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI336862A/turkey/Jenin/341/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI628911A/chicken/F611/Egypt/2015(H5N1) (A/H5N1) segment 4 (HA)2963.10.000000e+001629/1642 (99%)EPI603902A/chicken/Egypt/1439CAL/2014 (A/H5N1) segment 4 (HA)2963.10.000000e+001664/1694 (98%)EPI538767A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 4 (HA)2963.10.000000e+001662/1691 (98%)EPI372923A/Egypt/N7724/2011 (A/H5N1) segment 4 (HA)2961.30.000000e+001670/1704 (98%)EPI369189A/chicken/Egypt/1188/2011 (A/H5N1) segment 4 (HA)2961.30.000000e+001671/1705 (98%)EPI597819A/duck/Egypt/1468S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI557202A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 4 (HA)2959.50.000000e+001668/1701 (98%)EPI493430A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI393786A/Egypt/N02137/2012 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI373019A/Egypt/N04285/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI373018A/Egypt/N00002/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI372859A/Egypt/N6322/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI369181A/chicken/Egypt/1176/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI369180A/duck/Egypt/1120SMF/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340173A/chicken/Egypt/1021AD/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340160A/chicken/Egypt/10250SF/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340127A/chicken/Egypt/111AF/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340109A/chicken/Egypt/111640V/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340082A/quail/Egypt/1171SG/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338731A/goose/Egypt/M2794E/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338613A/goose/Egypt/M2788A/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338612A/goose/Egypt/M2788E/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338611A/goose/Egypt/M2794A/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI603901A/chicken/Egypt/1436CAL/2014 (A/H5N1) segment 4 (HA)2957.60.000000e+001663/1694 (98%)EPI460395A/chicken/Egypt/1094/2010 (A/H5N1) segment 4 (HA)2957.60.000000e+001663/1694 (98%)EPI348155A/chicken/Egypt/11VIR4453-68/VRLCU/2011 (A/H5N1) segment 4 (HA)2957.60.000000e+001661/1691 (98%)EPI373022A/Egypt/N09407/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI372867A/Egypt/N6658/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340152A/duck/Egypt/10290SF/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340149A/duck/Egypt/10336SF/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340147A/chicken/Egypt/10132/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340134A/duck/Egypt/1113SD/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340129A/chicken/Egypt/1174S/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340116A/chicken/Egypt/116AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340115A/duck/Egypt/1174SF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340099A/duck/Egypt/1153/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340096A/chicken/Egypt/111945V/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI338608A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI603908A/chicken/Egypt/1456CAL/2014 (A/H5N1) segment 4 (HA)2952.10.000000e+001662/1694 (98%)EPI348154A/chicken/Egypt/11VIR4453-264/2010 (A/H5N1) segment 4 (HA)2952.10.000000e+001668/1704 (97%)EPI574389A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 4 (HA)2950.20.000000e+001629/1644 (99%)EPI372915A/Egypt/N7592/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001668/1704 (97%)EPI597827A/chicken/Egypt/147CA/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001670/1706 (97%)EPI597821A/chicken/Egypt/1411CAL/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI373014A/Egypt/N04287/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001670/1706 (97%)EPI372883A/Egypt/N6774/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372715A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI369193A/chicken/Egypt/121/2012 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI369190A/duck/Egypt/11762s/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340097A/duck/Egypt/11221S/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI255398A/Egypt/N09174/2009 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI603900A/turkey/Egypt/1419FAOS/2014 (A/H5N1) segment 4 (HA)2946.50.000000e+001661/1694 (98%)EPI348148A/chicken/Egypt/11VIR4453-59/VRLCU/2011 (A/H5N1) segment 4 (HA)2946.50.000000e+001657/1688 (98%)EPI603915A/duck/Egypt/153AL/2015 (A/H5N1) segment 4 (HA)2944.70.000000e+001616/1627 (99%)EPI369179A/chicken/Egypt/11506SF/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001667/1704 (97%)EPI608785A/chicken/Israel/156/2015 (A/H5N1) segment 4 (HA)2942.80.000000e+001625/1641 (99%)EPI493497A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372931A/Egypt/N09966/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372891A/Egypt/N6828/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI369185A/chicken/Egypt/11667s/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340146A/chicken/Egypt/10347SF/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340110A/goose/Egypt/11162S/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338730A/chicken/Egypt/S2938A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338729A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI255371A/Egypt/N02127/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI348150A/chicken/Egypt/11VIR4453-138/VRLCU/2011 (A/H5N1) segment 4 (HA)2941.00.000000e+001664/1699 (97%)EPI255367A/Egypt/N01982/2010 (A/H5N1) segment 4 (HA)2939.10.000000e+001666/1704 (97%)EPI557210A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 4 (HA)2937.30.000000e+001665/1702 (97%)EPI500117A/duck/Egypt/S6419C/2012 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI500080A/turkey/Egypt/S6405E/2012 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI493152A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI398575A/duck/Egypt/Q4596C/2012 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI373021A/Egypt/N16789/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI372955A/Egypt/N14976/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI372947A/Egypt/N11470/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340144A/chicken/Egypt/10413SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340098A/duck/Egypt/11106SF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340093A/chicken/Egypt/11124SF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340089A/duck/Egypt/11312S/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI338187A/harrier/Israel/531/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI597824A/chicken/Egypt/14126S/2014 (A/H5N1) segment 4 (HA)2933.60.000000e+001670/1709 (97%)EPI573314A/chicken/Egypt/14148CA/2014 (A/H5N1) segment 4 (HA)2933.60.000000e+001616/1630 (99%)EPI348162A/chicken/Egypt/11VIR4453-7/VRLCU/2010 (A/H5N1) segment 4 (HA)2933.60.000000e+001662/1699 (97%)EPI597826A/chicken/Egypt/141VI/2014 (A/H5N1) segment 4 (HA)2931.80.000000e+001667/1706 (97%)EPI538807A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 4 (HA)2931.80.000000e+001637/1662 (98%)EPI538791A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 4 (HA)2931.80.000000e+001637/1662 (98%)EPI500085A/duck/Egypt/S6419E/2012 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI372939A/Egypt/N11126/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369198A/chicken/Egypt/12186F-12/2012 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369186A/duck/Egypt/11685s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI369183A/chicken/Egypt/11672s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI348159A/chicken/Egypt/11VIR4453-137/VRLCU/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001655/1689 (97%)EPI340150A/duck/Egypt/10331SF/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340081A/chicken/Egypt/11529S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI287352A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI283813A/duck/Egypt/1068s/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI283811A/goose/Egypt/1057/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001663/1701 (97%)EPI283791A/chicken/Egypt/1034/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001663/1701 (97%)EPI255400A/Egypt/N09539/2009 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI500113A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369197A/chicken/Egypt/12186F-9/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340114A/chicken/Egypt/117AF/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340111A/chicken/Egypt/119AF/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI597820A/chicken/Egypt/1429AD/2014 (A/H5N1) segment 4 (HA)2922.50.000000e+001667/1708 (97%)EPI573334A/chicken/Egypt/141/2014 (A/H5N1) segment 4 (HA)2920.70.000000e+001648/1681 (98%)EPI573333A/chicken/Egypt/1427AF/2014 (A/H5N1) segment 4 (HA)2920.70.000000e+001653/1689 (97%)EPI573317A/chicken/Egypt/1575S/2015 (A/H5N1) segment 4 (HA)2920.70.000000e+001611/1626 (99%)EPI550486A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI504989A/duck/Egypt/BSU-FA-1D/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI398585A/chicken/Egypt/S3802D/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI398582A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI398579A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI398578A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI398573A/chicken/Egypt/S3806A/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI340113A/chicken/Egypt/118AF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340090A/chicken/Egypt/1117AF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI283815A/duck/Egypt/106d/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001661/1701 (97%)EPI283782A/chicken/Egypt/091317s/2009 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI214881A/chicken/Egypt/0920-NLQP/2009 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI184804A/Egypt/N00585/2009 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340088A/duck/Egypt/11175SF/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001664/1706 (97%)EPI340086A/goose/Egypt/11350S/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI283821A/duck/Egypt/1063s/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001660/1701 (97%)EPI283789A/chicken/Egypt/1029/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)
  16. niman
    LOCUS KT792918 1751 bp cRNA linear VRL 20-OCT-2015 DEFINITION Influenza A virus (A/duck/Gaza/552/2015(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT792918 VERSION KT792918.1 GI:938454702 KEYWORDS . SOURCE Influenza A virus (A/duck/Gaza/552/2015(H5N1)) ORGANISM Influenza A virus (A/duck/Gaza/552/2015(H5N1)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1751) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Highly pathogenic avian influenza A virus H5N1 isolated in Israel 2015 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1751) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Direct Submission JOURNAL Submitted (21-SEP-2015) Division of Avian Diseases, Kimron Veterinari Institute, P.O.Box 12, Bet Dagan 50250, Israel COMMENT ##Assembly-Data-START## Assembly Method :: SeqMan DNAStar v. DNASTAR Lasergene 8 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1751 /organism="Influenza A virus (A/duck/Gaza/552/2015(H5N1))" /mol_type="viral cRNA" /strain="A/duck/Gaza/552/2015" /serotype="H5N1" /host="duck" /db_xref="taxon:1720091" /segment="4" /country="Israel" /collection_date="12-Apr-2015" /note="passage details: E1" gene 4..1707 /gene="HA" CDS 4..1707 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALJ33533.1" /db_xref="GI:938454703" /translation="MEKIVLLLAIASIVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCNLDGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSYIVEKINPA NDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKDSWSDHEASGVSSACPYQGRSSFFR NVVWLTKKNDAYPTIKKSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNPTTYISVGTS TLNQRLVPKIATRSKVNGQSGRMEFFWTILKSNDAINFESNGNFIAPENAYKIVKKGD STIMKSELEYSNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRN SPQGEKRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQRAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHRCDNECMESVRNGTYDYPQYS EEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRIC I" sig_peptide 4..51 /gene="HA" mat_peptide 52..1038 /gene="HA" /product="HA1" mat_peptide 1039..1704 /gene="HA" /product="HA2" ORIGIN 1 aaaatggaga aaatagtgct tcttcttgca atagccagta ttgtcaaaag tgatcagatt 61 tgcattggtt accatgcaaa caactcgaca gagcaggttg acacaataat ggaaaagaac 121 gtcactgtta cacacgccca agacatactg gaaaagacac acaacgggaa actctgcaat 181 ctagatggag tgaagcctct cattttaaga gattgtagtg tagctggatg gctcctcggg 241 aacccaatgt gcgatgaatt cctcaatgtg ccggaatggt cttacatagt ggagaaaatc 301 aatccagcca atgacctctg ttatccaggg aatttcaacg actatgaaga actgaaacac 361 ctattgagca gaataaacca ttttgagaaa attcagatca ttcccaaaga ttcttggtca 421 gatcatgaag cctcaggagt gagctcagca tgcccatacc aaggaagatc ctcctttttt 481 agaaatgttg tatggcttac caaaaagaac gatgcatacc caacaataaa gaaaagttac 541 aataatacta accaagaaga tcttttggta ctatggggga ttcaccatcc aaatgatgct 601 gcagagcaga caaggcttta tcaaaaccca actacctata tctccgttgg gacatcaaca 661 ctaaaccaga gattggtacc caaaatagct actagatcta aggtaaacgg gcaaagtgga 721 aggatggagt ttttttggac aattttaaaa tcgaatgatg caataaactt tgagagcaat 781 ggaaacttca ttgctccaga aaatgcatac aaaattgtca agaaaggaga ttcaacaatt 841 atgaaaagtg agttggaata tagtaactgc aacaccaagt gtcagactcc aataggggcg 901 ataaactcca gtatgccatt ccacaacatc caccctctca ccatcgggga atgccccaaa 961 tatgtgaaat caaacagatt agtccttgct actgggctca ggaatagccc tcaaggagag 1021 aaaagaagaa aaaagagagg actattcgga gccatagcag gctttataga gggaggatgg 1081 cagggaatgg tagatggttg gtatgggtac caccatagca acgagcaggg gagtgggtac 1141 gctgcagaca aagaatccac tcaaagggct atagatggag tcaccaataa ggtcaattcg 1201 atcattgaca aaatgaacac ccagtttgag gctgttggaa gggaatttaa taacttagaa 1261 aggagaatag aaaatttgaa caagaagatg gaagacggat tcctagatgt ctggacctat 1321 aatgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat 1381 gtcaagaatc tttatgacaa ggtccgacta cagcttaggg ataatgcaaa ggagcttggt 1441 aacggctgtt tcgagttcta tcacagatgt gataatgaat gtatggaaag tgtaagaaac 1501 ggaacgtatg actatcctca atattcagaa gaagcaagat taaaaagaga ggaaataagt 1561 ggagtaaaat tggagtcaat aggaacttac caaatactgt caatttattc aacagtggcg 1621 agctccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga 1681 tcgctacaat gcagaatttg catttaaatt tgtgagttca aattgtagtt aaaaacaccc 1741 ttgtttctac t
  17. niman
    AlignSegment-IDNameScoreE-ValueIdentityEPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3066.60.000000e+001689/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3055.50.000000e+001684/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001660/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3013.00.000000e+001659/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3011.20.000000e+001659/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001658/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001655/1671 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001676/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2989.00.000000e+001675/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2983.50.000000e+001674/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2981.60.000000e+001672/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2977.90.000000e+001631/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001670/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2961.30.000000e+001627/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001670/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1703 (98%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI597813A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI537618A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373012A/Egypt/N04286/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI372875A/Egypt/N0677/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI369180A/duck/Egypt/1120SMF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340165A/duck/Egypt/10228SF/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340154A/duck/Egypt/10118/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340141A/chicken/Egypt/112SG/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340131A/chicken/Egypt/1117/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340122A/chicken/Egypt/1128/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340107A/chicken/Egypt/11184S/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340102A/chicken/Egypt/1134SD/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340091A/duck/Egypt/11117SS/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373017A/Egypt/N05860/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001668/1704 (97%)EPI348151A/chicken/Egypt/11VIR4453-270/2010 (A/H5N1) segment 4 (HA)2950.20.000000e+001664/1698 (97%)EPI340118A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001671/1707 (97%)EPI597828A/goose/Egypt/1439FAOS/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI597811A/duck/Egypt/141AI/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI537617A/Egypt/N01753/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001667/1703 (97%)EPI393783A/Egypt/N00951/2012 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373022A/Egypt/N09407/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373015A/Egypt/N04284/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372851A/Egypt/N0544/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340126A/chicken/Egypt/112AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340124A/chicken/Egypt/114AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340123A/chicken/Egypt/115AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340121A/chicken/Egypt/1146SF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340119A/duck/Egypt/1148SF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340100A/duck/Egypt/11211S/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340094A/duck/Egypt/1116AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338614A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338609A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI336862A/turkey/Jenin/341/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI628911A/chicken/F611/Egypt/2015(H5N1) (A/H5N1) segment 4 (HA)2946.50.000000e+001626/1642 (99%)EPI603902A/chicken/Egypt/1439CAL/2014 (A/H5N1) segment 4 (HA)2946.50.000000e+001661/1694 (98%)EPI538767A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 4 (HA)2946.50.000000e+001659/1691 (98%)EPI372923A/Egypt/N7724/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001667/1704 (97%)EPI369189A/chicken/Egypt/1188/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001668/1705 (97%)EPI597819A/duck/Egypt/1468S/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI557202A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 4 (HA)2942.80.000000e+001665/1701 (97%)EPI493430A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI393786A/Egypt/N02137/2012 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373019A/Egypt/N04285/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373018A/Egypt/N00002/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372859A/Egypt/N6322/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372715A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI369181A/chicken/Egypt/1176/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340173A/chicken/Egypt/1021AD/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340160A/chicken/Egypt/10250SF/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340127A/chicken/Egypt/111AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340109A/chicken/Egypt/111640V/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340082A/quail/Egypt/1171SG/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338731A/goose/Egypt/M2794E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338613A/goose/Egypt/M2788A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338612A/goose/Egypt/M2788E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338611A/goose/Egypt/M2794A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI255398A/Egypt/N09174/2009 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI603901A/chicken/Egypt/1436CAL/2014 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI460395A/chicken/Egypt/1094/2010 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI348155A/chicken/Egypt/11VIR4453-68/VRLCU/2011 (A/H5N1) segment 4 (HA)2941.00.000000e+001658/1691 (98%)EPI372867A/Egypt/N6658/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340152A/duck/Egypt/10290SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340149A/duck/Egypt/10336SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340147A/chicken/Egypt/10132/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340134A/duck/Egypt/1113SD/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340129A/chicken/Egypt/1174S/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340116A/chicken/Egypt/116AF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340115A/duck/Egypt/1174SF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340099A/duck/Egypt/1153/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340096A/chicken/Egypt/111945V/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI338608A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI255371A/Egypt/N02127/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI603908A/chicken/Egypt/1456CAL/2014 (A/H5N1) segment 4 (HA)2935.40.000000e+001659/1694 (97%)EPI348154A/chicken/Egypt/11VIR4453-264/2010 (A/H5N1) segment 4 (HA)2935.40.000000e+001665/1704 (97%)EPI574389A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 4 (HA)2933.60.000000e+001626/1644 (98%)EPI372915A/Egypt/N7592/2011 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI255367A/Egypt/N01982/2010 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI597827A/chicken/Egypt/147CA/2014 (A/H5N1) segment 4 (HA)2931.80.000000e+001667/1706 (97%)EPI597821A/chicken/Egypt/1411CAL/2014 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI373014A/Egypt/N04287/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001667/1706 (97%)EPI372883A/Egypt/N6774/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369193A/chicken/Egypt/121/2012 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369190A/duck/Egypt/11762s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340144A/chicken/Egypt/10413SF/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI340097A/duck/Egypt/11221S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340089A/duck/Egypt/11312S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI603900A/turkey/Egypt/1419FAOS/2014 (A/H5N1) segment 4 (HA)2929.90.000000e+001658/1694 (97%)EPI348148A/chicken/Egypt/11VIR4453-59/VRLCU/2011 (A/H5N1) segment 4 (HA)2929.90.000000e+001654/1688 (97%)EPI603915A/duck/Egypt/153AL/2015 (A/H5N1) segment 4 (HA)2928.10.000000e+001613/1627 (99%)EPI369179A/chicken/Egypt/11506SF/2011 (A/H5N1) segment 4 (HA)2928.10.000000e+001664/1704 (97%)EPI608785A/chicken/Israel/156/2015 (A/H5N1) segment 4 (HA)2926.20.000000e+001622/1641 (98%)EPI493497A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI372931A/Egypt/N09966/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI372891A/Egypt/N6828/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI369186A/duck/Egypt/11685s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI369185A/chicken/Egypt/11667s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369183A/chicken/Egypt/11672s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340146A/chicken/Egypt/10347SF/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340110A/goose/Egypt/11162S/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI338730A/chicken/Egypt/S2938A/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI338729A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI287352A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI283813A/duck/Egypt/1068s/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI283811A/goose/Egypt/1057/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001662/1701 (97%)EPI283791A/chicken/Egypt/1034/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001662/1701 (97%)EPI255400A/Egypt/N09539/2009 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI348150A/chicken/Egypt/11VIR4453-138/VRLCU/2011 (A/H5N1) segment 4 (HA)2924.40.000000e+001661/1699 (97%)EPI557210A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 4 (HA)2920.70.000000e+001662/1702 (97%)EPI500117A/duck/Egypt/S6419C/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI500080A/turkey/Egypt/S6405E/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI493152A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI398575A/duck/Egypt/Q4596C/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI373021A/Egypt/N16789/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI372955A/Egypt/N14976/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI372947A/Egypt/N11470/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI369197A/chicken/Egypt/12186F-9/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340098A/duck/Egypt/11106SF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI340093A/chicken/Egypt/11124SF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI338187A/harrier/Israel/531/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI597824A/chicken/Egypt/14126S/2014 (A/H5N1) segment 4 (HA)2917.00.000000e+001667/1709 (97%)EPI573314A/chicken/Egypt/14148CA/2014 (A/H5N1) segment 4 (HA)2917.00.000000e+001613/1630 (98%)EPI348162A/chicken/Egypt/11VIR4453-7/VRLCU/2010 (A/H5N1) segment 4 (HA)2917.00.000000e+001659/1699 (97%)EPI597826A/chicken/Egypt/141VI/2014 (A/H5N1) segment 4 (HA)2915.10.000000e+001664/1706 (97%)EPI573333A/chicken/Egypt/1427AF/2014 (A/H5N1) segment 4 (HA)2915.10.000000e+001652/1689 (97%)EPI550486A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI538807A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001634/1662 (98%)EPI538791A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001634/1662 (98%)EPI500085A/duck/Egypt/S6419E/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI372939A/Egypt/N11126/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI369198A/chicken/Egypt/12186F-12/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI348159A/chicken/Egypt/11VIR4453-137/VRLCU/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001652/1689 (97%)EPI340150A/duck/Egypt/10331SF/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI340081A/chicken/Egypt/11529S/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI283815A/duck/Egypt/106d/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001660/1701 (97%)EPI283782A/chicken/Egypt/091317s/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI214881A/chicken/Egypt/0920-NLQP/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI500113A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340114A/chicken/Egypt/117AF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340111A/chicken/Egypt/119AF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340088A/duck/Egypt/11175SF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001663/1706 (97%)EPI283821A/duck/Egypt/1063s/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001659/1701 (97%)EPI283789A/chicken/Egypt/1029/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI255394A/Egypt/N08835/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI255375A/Egypt/N02770/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI184804A/Egypt/N00585/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI597820A/chicken/Egypt/1429AD/2014 (A/H5N1) segment 4 (HA)2905.90.000000e+001664/1708 (97%)EPI573334A/chicken/Egypt/141/2014 (A/H5N1) segment 4 (HA)2904.10.000000e+001645/1681 (97%)EPI573324A/duck/Egypt/1560S/2015 (A/H5N1) segment 4 (HA)2904.10.000000e+001601/1615 (99%)EPI573317A/chicken/Egypt/1575S/2015 (A/H5N1) segment 4 (HA)2904.10.000000e+001608/1626 (98%)EPI504989A/duck/Egypt/BSU-FA-1D/2012 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI398585A/chicken/Egypt/S3802D/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398582A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398579A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398578A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398573A/chicken/Egypt/S3806A/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)
  18. niman
    LOCUS KT792913 1750 bp cRNA linear VRL 20-OCT-2015 DEFINITION Influenza A virus (A/duck/Gaza/829/2015(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT792913 VERSION KT792913.1 GI:938454692 KEYWORDS . SOURCE Influenza A virus (A/duck/Gaza/829/2015(H5N1)) ORGANISM Influenza A virus (A/duck/Gaza/829/2015(H5N1)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1750) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Highly pathogenic avian influenza A virus H5N1 isolated in Israel 2015 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1750) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Direct Submission JOURNAL Submitted (21-SEP-2015) Division of Avian Diseases, Kimron Veterinari Institute, P.O.Box 12, Bet Dagan 50250, Israel COMMENT ##Assembly-Data-START## Assembly Method :: SeqMan DNAStar v. DNASTAR Lasergene 8 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1750 /organism="Influenza A virus (A/duck/Gaza/829/2015(H5N1))" /mol_type="viral cRNA" /strain="A/duck/Gaza/829/2015" /serotype="H5N1" /host="duck" /db_xref="taxon:1720092" /segment="4" /country="Israel" /collection_date="21-Jun-2015" /note="passage details: E1" gene 4..1707 /gene="HA" CDS 4..1707 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALJ33528.1" /db_xref="GI:938454693" /translation="MEKIVLLLAIASIVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCNLDGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSYIVEKINPA NDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKDSWSDHEASGVSSACPYQGRSSFFR NVVWLTKKNDAYPTIKKSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNPTTYISVGTS TLNQRLVPKIATRSKVNGQSGRMEFFWTILKSNDAINFESNGNFIAPENAYKIVKKGD STIMKSELEYSNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRN SPQGEKRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQRAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHRCDNECMESVRNGTYDYPQYS EEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRIC I" sig_peptide 4..51 /gene="HA" mat_peptide 52..1038 /gene="HA" /product="HA1" mat_peptide 1039..1704 /gene="HA" /product="HA2" ORIGIN 1 aaaatggaga aaatagtgct tcttcttgca atagccagta ttgtcaaaag tgatcagatt 61 tgcattggtt accatgcaaa caactcgaca gagcaggttg acacaataat ggaaaagaac 121 gtcactgtta cacacgccca agacatactg gaaaagacac acaacgggaa actctgcaat 181 ctagatggag tgaagcctct cattttaaga gattgtagtg tagctggatg gctcctcggg 241 aacccaatgt gcgatgagtt cctcaatgtg ccggagtggt cttacatagt ggagaaaatc 301 aatccagcca atgacctctg ttatccaggg aatttcaacg actatgaaga actgaaacac 361 ctattgagca gaataaacca ttttgagaaa attcagatca ttcccaaaga ttcttggtca 421 gatcatgaag cctcaggagt gagctcagca tgcccatacc aaggaagatc ctcctttttt 481 agaaatgttg tatggcttac caaaaagaac gatgcatacc caacaataaa gaaaagttac 541 aataatacta accaagaaga tcttttggta ctatggggga ttcaccatcc aaatgatgct 601 gcagagcaga caaggcttta tcaaaaccca actacctata tctccgttgg gacatcaaca 661 ctaaaccaga gattggtacc caaaatagct actagatcta aggtaaacgg gcaaagtgga 721 aggatggagt tcttttggac aattttaaaa tcgaatgatg caataaactt tgagagcaat 781 ggaaacttca ttgctccaga aaatgcatac aaaattgtca agaaaggaga ttcaacaatt 841 atgaaaagtg agttggaata tagtaactgc aacaccaagt gtcagactcc aataggggcg 901 ataaactcca gtatgccatt ccacaacatc caccctctca ccatcgggga atgccccaaa 961 tatgtgaaat caaacagatt agtccttgct actgggctca ggaatagccc tcaaggagag 1021 aaaagaagaa aaaagagagg actattcgga gccatagcag gttttataga gggaggatgg 1081 cagggaatgg tagatggttg gtatgggtac caccatagca acgagcaggg gagtgggtac 1141 gctgcagaca aagaatccac tcaaagggct atagatggag tcaccaataa ggtcaattca 1201 atcattgaca aaatgaacac ccagtttgag gctgttggaa gggaatttaa taacttagaa 1261 aggagaatag aaaatttgaa caagaagatg gaagacggat tcctagatgt ctggacctat 1321 aatgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat 1381 gtcaagaatc tttatgacaa ggtccgacta cagcttaggg ataatgcaaa ggagcttggt 1441 aacggctgtt tcgagttcta tcacagatgt gataatgaat gtatggaaag tgtaagaaac 1501 ggaacgtatg actatcctca atattcagaa gaagcaagat taaaaagaga ggaaataagt 1561 ggagtaaaat tggagtcaat aggaacttac caaatactgt caatttattc aacagtggcg 1621 agctccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga 1681 tcgctacaat gcagaatttg catttaaatt tgtgagttca aattgtagtt aaaaacaccc 1741 ttgtttctac
  19. niman
    AlignSegment-IDNameScoreE-ValueIdentityEPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3066.60.000000e+001689/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3055.50.000000e+001684/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001660/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3013.00.000000e+001659/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3011.20.000000e+001659/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001658/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)2998.20.000000e+001655/1671 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001676/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2989.00.000000e+001675/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2983.50.000000e+001674/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2981.60.000000e+001672/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2977.90.000000e+001631/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001670/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2961.30.000000e+001627/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001670/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1703 (98%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI597813A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI537618A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373012A/Egypt/N04286/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI372875A/Egypt/N0677/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI369180A/duck/Egypt/1120SMF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340165A/duck/Egypt/10228SF/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340154A/duck/Egypt/10118/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340141A/chicken/Egypt/112SG/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340131A/chicken/Egypt/1117/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340122A/chicken/Egypt/1128/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340107A/chicken/Egypt/11184S/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340102A/chicken/Egypt/1134SD/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340091A/duck/Egypt/11117SS/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373017A/Egypt/N05860/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001668/1704 (97%)EPI348151A/chicken/Egypt/11VIR4453-270/2010 (A/H5N1) segment 4 (HA)2950.20.000000e+001664/1698 (97%)EPI340118A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001671/1707 (97%)EPI597828A/goose/Egypt/1439FAOS/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI597811A/duck/Egypt/141AI/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI537617A/Egypt/N01753/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001667/1703 (97%)EPI393783A/Egypt/N00951/2012 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373022A/Egypt/N09407/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373015A/Egypt/N04284/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372851A/Egypt/N0544/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340126A/chicken/Egypt/112AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340124A/chicken/Egypt/114AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340123A/chicken/Egypt/115AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340121A/chicken/Egypt/1146SF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340119A/duck/Egypt/1148SF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340100A/duck/Egypt/11211S/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340094A/duck/Egypt/1116AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338614A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338609A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI336862A/turkey/Jenin/341/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI628911A/chicken/F611/Egypt/2015(H5N1) (A/H5N1) segment 4 (HA)2946.50.000000e+001626/1642 (99%)EPI603902A/chicken/Egypt/1439CAL/2014 (A/H5N1) segment 4 (HA)2946.50.000000e+001661/1694 (98%)EPI538767A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 4 (HA)2946.50.000000e+001659/1691 (98%)EPI372923A/Egypt/N7724/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001667/1704 (97%)EPI369189A/chicken/Egypt/1188/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001668/1705 (97%)EPI597819A/duck/Egypt/1468S/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI557202A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 4 (HA)2942.80.000000e+001665/1701 (97%)EPI493430A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI393786A/Egypt/N02137/2012 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373019A/Egypt/N04285/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373018A/Egypt/N00002/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372859A/Egypt/N6322/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372715A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI369181A/chicken/Egypt/1176/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340173A/chicken/Egypt/1021AD/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340160A/chicken/Egypt/10250SF/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340127A/chicken/Egypt/111AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340109A/chicken/Egypt/111640V/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340082A/quail/Egypt/1171SG/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338731A/goose/Egypt/M2794E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338613A/goose/Egypt/M2788A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338612A/goose/Egypt/M2788E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338611A/goose/Egypt/M2794A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI255398A/Egypt/N09174/2009 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI603901A/chicken/Egypt/1436CAL/2014 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI460395A/chicken/Egypt/1094/2010 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI348155A/chicken/Egypt/11VIR4453-68/VRLCU/2011 (A/H5N1) segment 4 (HA)2941.00.000000e+001658/1691 (98%)EPI372867A/Egypt/N6658/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340152A/duck/Egypt/10290SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340149A/duck/Egypt/10336SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340147A/chicken/Egypt/10132/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340134A/duck/Egypt/1113SD/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340129A/chicken/Egypt/1174S/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340116A/chicken/Egypt/116AF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340115A/duck/Egypt/1174SF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340099A/duck/Egypt/1153/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340096A/chicken/Egypt/111945V/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI338608A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI255371A/Egypt/N02127/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI603908A/chicken/Egypt/1456CAL/2014 (A/H5N1) segment 4 (HA)2935.40.000000e+001659/1694 (97%)EPI348154A/chicken/Egypt/11VIR4453-264/2010 (A/H5N1) segment 4 (HA)2935.40.000000e+001665/1704 (97%)EPI574389A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 4 (HA)2933.60.000000e+001626/1644 (98%)EPI372915A/Egypt/N7592/2011 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI255367A/Egypt/N01982/2010 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI597827A/chicken/Egypt/147CA/2014 (A/H5N1) segment 4 (HA)2931.80.000000e+001667/1706 (97%)EPI597821A/chicken/Egypt/1411CAL/2014 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI500117A/duck/Egypt/S6419C/2012 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI500080A/turkey/Egypt/S6405E/2012 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI373014A/Egypt/N04287/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001667/1706 (97%)EPI372883A/Egypt/N6774/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369193A/chicken/Egypt/121/2012 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369190A/duck/Egypt/11762s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340144A/chicken/Egypt/10413SF/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI340097A/duck/Egypt/11221S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340089A/duck/Egypt/11312S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI603900A/turkey/Egypt/1419FAOS/2014 (A/H5N1) segment 4 (HA)2929.90.000000e+001658/1694 (97%)EPI348148A/chicken/Egypt/11VIR4453-59/VRLCU/2011 (A/H5N1) segment 4 (HA)2929.90.000000e+001654/1688 (97%)EPI603915A/duck/Egypt/153AL/2015 (A/H5N1) segment 4 (HA)2928.10.000000e+001613/1627 (99%)EPI369179A/chicken/Egypt/11506SF/2011 (A/H5N1) segment 4 (HA)2928.10.000000e+001664/1704 (97%)EPI608785A/chicken/Israel/156/2015 (A/H5N1) segment 4 (HA)2926.20.000000e+001622/1641 (98%)EPI500085A/duck/Egypt/S6419E/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI493497A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI372931A/Egypt/N09966/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI372891A/Egypt/N6828/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI369186A/duck/Egypt/11685s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI369185A/chicken/Egypt/11667s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369183A/chicken/Egypt/11672s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340146A/chicken/Egypt/10347SF/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340110A/goose/Egypt/11162S/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI338730A/chicken/Egypt/S2938A/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI338729A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI287352A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI283813A/duck/Egypt/1068s/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI283811A/goose/Egypt/1057/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001662/1701 (97%)EPI283791A/chicken/Egypt/1034/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001662/1701 (97%)EPI255400A/Egypt/N09539/2009 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI348150A/chicken/Egypt/11VIR4453-138/VRLCU/2011 (A/H5N1) segment 4 (HA)2924.40.000000e+001661/1699 (97%)EPI557210A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 4 (HA)2920.70.000000e+001662/1702 (97%)EPI493152A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI398575A/duck/Egypt/Q4596C/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI373021A/Egypt/N16789/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI372955A/Egypt/N14976/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI372947A/Egypt/N11470/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI369197A/chicken/Egypt/12186F-9/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340098A/duck/Egypt/11106SF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI340093A/chicken/Egypt/11124SF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI338187A/harrier/Israel/531/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI597824A/chicken/Egypt/14126S/2014 (A/H5N1) segment 4 (HA)2917.00.000000e+001667/1709 (97%)EPI573314A/chicken/Egypt/14148CA/2014 (A/H5N1) segment 4 (HA)2917.00.000000e+001613/1630 (98%)EPI348162A/chicken/Egypt/11VIR4453-7/VRLCU/2010 (A/H5N1) segment 4 (HA)2917.00.000000e+001659/1699 (97%)EPI597826A/chicken/Egypt/141VI/2014 (A/H5N1) segment 4 (HA)2915.10.000000e+001664/1706 (97%)EPI573333A/chicken/Egypt/1427AF/2014 (A/H5N1) segment 4 (HA)2915.10.000000e+001652/1689 (97%)EPI550486A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI538807A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001634/1662 (98%)EPI538791A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001634/1662 (98%)EPI372939A/Egypt/N11126/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI369198A/chicken/Egypt/12186F-12/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI348159A/chicken/Egypt/11VIR4453-137/VRLCU/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001652/1689 (97%)EPI340150A/duck/Egypt/10331SF/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI340081A/chicken/Egypt/11529S/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI283815A/duck/Egypt/106d/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001660/1701 (97%)EPI283782A/chicken/Egypt/091317s/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI214881A/chicken/Egypt/0920-NLQP/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI500113A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340114A/chicken/Egypt/117AF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340111A/chicken/Egypt/119AF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340088A/duck/Egypt/11175SF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001663/1706 (97%)EPI283821A/duck/Egypt/1063s/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001659/1701 (97%)EPI283789A/chicken/Egypt/1029/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI255394A/Egypt/N08835/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI255375A/Egypt/N02770/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI184804A/Egypt/N00585/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI597820A/chicken/Egypt/1429AD/2014 (A/H5N1) segment 4 (HA)2905.90.000000e+001664/1708 (97%)EPI573334A/chicken/Egypt/141/2014 (A/H5N1) segment 4 (HA)2904.10.000000e+001645/1681 (97%)EPI573324A/duck/Egypt/1560S/2015 (A/H5N1) segment 4 (HA)2904.10.000000e+001601/1615 (99%)EPI573317A/chicken/Egypt/1575S/2015 (A/H5N1) segment 4 (HA)2904.10.000000e+001608/1626 (98%)EPI504989A/duck/Egypt/BSU-FA-1D/2012 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI398585A/chicken/Egypt/S3802D/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398582A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398579A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398578A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398573A/chicken/Egypt/S3806A/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)
  20. niman
    LOCUS KT792917 1750 bp cRNA linear VRL 20-OCT-2015 DEFINITION Influenza A virus (A/duck/Gaza/872/2015(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT792917 VERSION KT792917.1 GI:938454700 KEYWORDS . SOURCE Influenza A virus (A/duck/Gaza/872/2015(H5N1)) ORGANISM Influenza A virus (A/duck/Gaza/872/2015(H5N1)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1750) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Highly pathogenic avian influenza A virus H5N1 isolated in Israel 2015 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1750) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Direct Submission JOURNAL Submitted (21-SEP-2015) Division of Avian Diseases, Kimron Veterinari Institute, P.O.Box 12, Bet Dagan 50250, Israel COMMENT ##Assembly-Data-START## Assembly Method :: SeqMan DNAStar v. DNASTAR Lasergene 8 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1750 /organism="Influenza A virus (A/duck/Gaza/872/2015(H5N1))" /mol_type="viral cRNA" /strain="A/duck/Gaza/872/2015" /serotype="H5N1" /host="duck" /db_xref="taxon:1720093" /segment="4" /country="Israel" /collection_date="28-Jun-2015" /note="passage details: E1" gene 4..1707 /gene="HA" CDS 4..1707 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALJ33532.1" /db_xref="GI:938454701" /translation="MEKIVLLLAIASIVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCNLDGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSYIVEKINPA NDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKDSWSDHEASGVSSACPYQGRSSFFR NVVWLTKKNDAYPTIKKSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNPTTYISVGTS TLNQRLVPKIATRSKVNGQSGRMEFFWTILKSNDAINFESNGNFIAPENAYKIVKKGD STIMKSELEYSNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRN SPQGEKRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQRAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHRCDNECMESVRNGTYDYPQYS EEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRIC I" sig_peptide 4..51 /gene="HA" mat_peptide 52..1038 /gene="HA" /product="HA1" mat_peptide 1039..1704 /gene="HA" /product="HA2" ORIGIN 1 aaaatggaga aaatagtgct tcttcttgca atagccagta ttgtcaaaag tgatcagatt 61 tgcattggtt accatgcaaa caactcgaca gagcaggttg acacaataat ggaaaagaac 121 gtcactgtta cacacgccca agacatactg gaaaagacac acaacgggaa actctgcaat 181 ctagatggag tgaagcctct cattttaaga gattgtagtg tagctggatg gctcctcggg 241 aacccaatgt gcgatgagtt cctcaatgtg ccggaatggt cttacatagt ggagaaaatc 301 aatccagcca atgacctctg ttatccaggg aatttcaacg actatgaaga actgaaacac 361 ctattgagca gaataaacca ttttgagaaa attcagatca ttcccaaaga ttcttggtca 421 gatcatgaag cctcaggagt gagctcagca tgcccatacc aaggaagatc ctcctttttt 481 agaaatgttg tatggcttac caaaaagaac gatgcatacc caacaataaa gaaaagttac 541 aataatacta accaagaaga tcttttggta ctatggggga ttcaccatcc aaatgatgct 601 gcagagcaga caaggcttta tcaaaaccca actacctata tctccgttgg gacatcaaca 661 ctaaaccaga gattggtacc caaaatagct actagatcta aggtaaacgg gcaaagtgga 721 aggatggagt tcttttggac aattttaaaa tcgaatgatg caataaactt tgagagcaat 781 ggaaacttca ttgctccaga aaatgcatac aaaattgtca agaaaggaga ttcaacaatt 841 atgaaaagtg agttggaata tagtaactgc aacaccaagt gtcagactcc aataggggcg 901 ataaactcca gtatgccatt ccacaacatc caccctctca ccatcgggga atgccccaaa 961 tatgtgaaat caaacagatt agtccttgct actgggctca ggaatagccc tcaaggagag 1021 aaaagaagaa aaaagagagg actattcgga gccatagcag gttttataga gggaggatgg 1081 cagggaatgg tagatggttg gtatgggtac caccatagca acgagcaggg gagtgggtac 1141 gctgcagaca aagaatccac tcaaagggct atagatggag tcaccaataa ggtcaattca 1201 atcattgaca aaatgaacac ccagtttgag gctgttggaa gggaatttaa taacttagaa 1261 aggagaatag aaaatttgaa caagaagatg gaagacggat tcctagatgt ctggacctat 1321 aatgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat 1381 gtcaaaaatc tttatgacaa ggtccgacta cagcttaggg ataatgcaaa ggagcttggt 1441 aacggctgtt tcgagttcta tcacagatgt gataatgaat gtatggaaag tgtaagaaac 1501 ggaacgtatg actatcctca atattcagaa gaagcaagat taaaaagaga ggaaataagt 1561 ggagtaaaat tggagtcaat aggaacttac caaatactgt caatttattc aacagtggcg 1621 agctccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga 1681 tcgctacaat gcagaatttg catttaaatt tgtgagttca aattgtagtt aaaaacaccc 1741 ttgtttctac
  21. niman
    AlignSegment-IDNameScoreE-ValueIdentityEPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3114.60.000000e+001698/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3081.30.000000e+001692/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3072.10.000000e+001690/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001689/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3061.00.000000e+001685/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001684/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3022.20.000000e+001661/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3018.50.000000e+001660/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001660/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3009.30.000000e+001659/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3005.60.000000e+001651/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3005.60.000000e+001651/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)3003.80.000000e+001656/1671 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001677/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001677/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2994.50.000000e+001676/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2992.70.000000e+001677/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2989.00.000000e+001675/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001673/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2983.50.000000e+001632/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2976.10.000000e+001631/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001671/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001670/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2968.70.000000e+001671/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2968.70.000000e+001671/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2966.80.000000e+001628/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2966.80.000000e+001671/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2966.80.000000e+001670/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2966.80.000000e+001670/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2966.80.000000e+001670/1703 (98%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597813A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI537618A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI373012A/Egypt/N04286/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI372875A/Egypt/N0677/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI369180A/duck/Egypt/1120SMF/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340165A/duck/Egypt/10228SF/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340154A/duck/Egypt/10118/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI340141A/chicken/Egypt/112SG/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340131A/chicken/Egypt/1117/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340122A/chicken/Egypt/1128/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340107A/chicken/Egypt/11184S/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI340102A/chicken/Egypt/1134SD/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340091A/duck/Egypt/11117SS/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI373017A/Egypt/N05860/2011 (A/H5N1) segment 4 (HA)2955.80.000000e+001669/1704 (97%)EPI348151A/chicken/Egypt/11VIR4453-270/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001665/1698 (98%)EPI340118A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 4 (HA)2955.80.000000e+001672/1707 (97%)EPI597828A/goose/Egypt/1439FAOS/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI597811A/duck/Egypt/141AI/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI537617A/Egypt/N01753/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001668/1703 (97%)EPI393783A/Egypt/N00951/2012 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373022A/Egypt/N09407/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373015A/Egypt/N04284/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI372851A/Egypt/N0544/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340126A/chicken/Egypt/112AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340124A/chicken/Egypt/114AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340123A/chicken/Egypt/115AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340121A/chicken/Egypt/1146SF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340119A/duck/Egypt/1148SF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340100A/duck/Egypt/11211S/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340094A/duck/Egypt/1116AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI338614A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI338609A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI336862A/turkey/Jenin/341/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI628911A/chicken/F611/Egypt/2015(H5N1) (A/H5N1) segment 4 (HA)2952.10.000000e+001627/1642 (99%)EPI603902A/chicken/Egypt/1439CAL/2014 (A/H5N1) segment 4 (HA)2952.10.000000e+001662/1694 (98%)EPI538767A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 4 (HA)2952.10.000000e+001660/1691 (98%)EPI372923A/Egypt/N7724/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001668/1704 (97%)EPI369189A/chicken/Egypt/1188/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001669/1705 (97%)EPI597819A/duck/Egypt/1468S/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI557202A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 4 (HA)2948.40.000000e+001666/1701 (97%)EPI493430A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI393786A/Egypt/N02137/2012 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373019A/Egypt/N04285/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373018A/Egypt/N00002/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372859A/Egypt/N6322/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372715A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI369181A/chicken/Egypt/1176/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340173A/chicken/Egypt/1021AD/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340160A/chicken/Egypt/10250SF/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340127A/chicken/Egypt/111AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340109A/chicken/Egypt/111640V/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340082A/quail/Egypt/1171SG/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338731A/goose/Egypt/M2794E/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338613A/goose/Egypt/M2788A/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338612A/goose/Egypt/M2788E/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338611A/goose/Egypt/M2794A/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI255398A/Egypt/N09174/2009 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI603901A/chicken/Egypt/1436CAL/2014 (A/H5N1) segment 4 (HA)2946.50.000000e+001661/1694 (98%)EPI460395A/chicken/Egypt/1094/2010 (A/H5N1) segment 4 (HA)2946.50.000000e+001661/1694 (98%)EPI348155A/chicken/Egypt/11VIR4453-68/VRLCU/2011 (A/H5N1) segment 4 (HA)2946.50.000000e+001659/1691 (98%)EPI372867A/Egypt/N6658/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340152A/duck/Egypt/10290SF/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340149A/duck/Egypt/10336SF/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340147A/chicken/Egypt/10132/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340134A/duck/Egypt/1113SD/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI340129A/chicken/Egypt/1174S/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340116A/chicken/Egypt/116AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI340115A/duck/Egypt/1174SF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340099A/duck/Egypt/1153/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340096A/chicken/Egypt/111945V/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338608A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI255371A/Egypt/N02127/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI603908A/chicken/Egypt/1456CAL/2014 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI348154A/chicken/Egypt/11VIR4453-264/2010 (A/H5N1) segment 4 (HA)2941.00.000000e+001666/1704 (97%)EPI574389A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 4 (HA)2939.10.000000e+001627/1644 (98%)EPI372915A/Egypt/N7592/2011 (A/H5N1) segment 4 (HA)2939.10.000000e+001666/1704 (97%)EPI255367A/Egypt/N01982/2010 (A/H5N1) segment 4 (HA)2939.10.000000e+001666/1704 (97%)EPI597827A/chicken/Egypt/147CA/2014 (A/H5N1) segment 4 (HA)2937.30.000000e+001668/1706 (97%)EPI597821A/chicken/Egypt/1411CAL/2014 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI373014A/Egypt/N04287/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001668/1706 (97%)EPI372883A/Egypt/N6774/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI369193A/chicken/Egypt/121/2012 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI369190A/duck/Egypt/11762s/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340144A/chicken/Egypt/10413SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340097A/duck/Egypt/11221S/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340089A/duck/Egypt/11312S/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI603900A/turkey/Egypt/1419FAOS/2014 (A/H5N1) segment 4 (HA)2935.40.000000e+001659/1694 (97%)EPI348148A/chicken/Egypt/11VIR4453-59/VRLCU/2011 (A/H5N1) segment 4 (HA)2935.40.000000e+001655/1688 (98%)EPI603915A/duck/Egypt/153AL/2015 (A/H5N1) segment 4 (HA)2933.60.000000e+001614/1627 (99%)EPI369179A/chicken/Egypt/11506SF/2011 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI608785A/chicken/Israel/156/2015 (A/H5N1) segment 4 (HA)2931.80.000000e+001623/1641 (98%)EPI493497A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI372931A/Egypt/N09966/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI372891A/Egypt/N6828/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI369186A/duck/Egypt/11685s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI369185A/chicken/Egypt/11667s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369183A/chicken/Egypt/11672s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340146A/chicken/Egypt/10347SF/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340110A/goose/Egypt/11162S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI338730A/chicken/Egypt/S2938A/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI338729A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI287352A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI283813A/duck/Egypt/1068s/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI283811A/goose/Egypt/1057/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001663/1701 (97%)EPI283791A/chicken/Egypt/1034/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001663/1701 (97%)EPI255400A/Egypt/N09539/2009 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI348150A/chicken/Egypt/11VIR4453-138/VRLCU/2011 (A/H5N1) segment 4 (HA)2929.90.000000e+001662/1699 (97%)EPI557210A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 4 (HA)2926.20.000000e+001663/1702 (97%)EPI500117A/duck/Egypt/S6419C/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI500080A/turkey/Egypt/S6405E/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI493152A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI398575A/duck/Egypt/Q4596C/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI373021A/Egypt/N16789/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI372955A/Egypt/N14976/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI372947A/Egypt/N11470/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369197A/chicken/Egypt/12186F-9/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340098A/duck/Egypt/11106SF/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI340093A/chicken/Egypt/11124SF/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI338187A/harrier/Israel/531/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI597824A/chicken/Egypt/14126S/2014 (A/H5N1) segment 4 (HA)2922.50.000000e+001668/1709 (97%)EPI573314A/chicken/Egypt/14148CA/2014 (A/H5N1) segment 4 (HA)2922.50.000000e+001614/1630 (99%)EPI348162A/chicken/Egypt/11VIR4453-7/VRLCU/2010 (A/H5N1) segment 4 (HA)2922.50.000000e+001660/1699 (97%)EPI597826A/chicken/Egypt/141VI/2014 (A/H5N1) segment 4 (HA)2920.70.000000e+001665/1706 (97%)EPI573333A/chicken/Egypt/1427AF/2014 (A/H5N1) segment 4 (HA)2920.70.000000e+001653/1689 (97%)EPI550486A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI538807A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 4 (HA)2920.70.000000e+001635/1662 (98%)EPI538791A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 4 (HA)2920.70.000000e+001635/1662 (98%)EPI500085A/duck/Egypt/S6419E/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI372939A/Egypt/N11126/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI369198A/chicken/Egypt/12186F-12/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI348159A/chicken/Egypt/11VIR4453-137/VRLCU/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001653/1689 (97%)EPI340150A/duck/Egypt/10331SF/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340081A/chicken/Egypt/11529S/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI283815A/duck/Egypt/106d/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001661/1701 (97%)EPI283782A/chicken/Egypt/091317s/2009 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI214881A/chicken/Egypt/0920-NLQP/2009 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI500113A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI340114A/chicken/Egypt/117AF/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI340111A/chicken/Egypt/119AF/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI340088A/duck/Egypt/11175SF/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001664/1706 (97%)EPI283821A/duck/Egypt/1063s/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001660/1701 (97%)EPI283789A/chicken/Egypt/1029/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI255394A/Egypt/N08835/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI255375A/Egypt/N02770/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI184804A/Egypt/N00585/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI597820A/chicken/Egypt/1429AD/2014 (A/H5N1) segment 4 (HA)2911.40.000000e+001665/1708 (97%)EPI573334A/chicken/Egypt/141/2014 (A/H5N1) segment 4 (HA)2909.60.000000e+001646/1681 (97%)EPI573324A/duck/Egypt/1560S/2015 (A/H5N1) segment 4 (HA)2909.60.000000e+001602/1615 (99%)EPI573317A/chicken/Egypt/1575S/2015 (A/H5N1) segment 4 (HA)2909.60.000000e+001609/1626 (98%)EPI504989A/duck/Egypt/BSU-FA-1D/2012 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI398585A/chicken/Egypt/S3802D/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001662/1705 (97%)EPI398582A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001662/1705 (97%)EPI398579A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001662/1705 (97%)EPI398578A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001662/1705 (97%)EPI398573A/chicken/Egypt/S3806A/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001662/1705 (97%)
  22. niman
    LOCUS KT792916 1724 bp cRNA linear VRL 20-OCT-2015 DEFINITION Influenza A virus (A/chicken/Gaza/797/2015(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT792916 VERSION KT792916.1 GI:938454698 KEYWORDS . SOURCE Influenza A virus (A/chicken/Gaza/797/2015(H5N1)) ORGANISM Influenza A virus (A/chicken/Gaza/797/2015(H5N1)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1724) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Highly pathogenic avian influenza A virus H5N1 isolated in Israel 2015 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1724) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Direct Submission JOURNAL Submitted (21-SEP-2015) Division of Avian Diseases, Kimron Veterinari Institute, P.O.Box 12, Bet Dagan 50250, Israel COMMENT ##Assembly-Data-START## Assembly Method :: SeqMan DNAStar v. DNASTAR Lasergene 8 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1724 /organism="Influenza A virus (A/chicken/Gaza/797/2015(H5N1))" /mol_type="viral cRNA" /strain="A/chicken/Gaza/797/2015" /serotype="H5N1" /host="chicken" /db_xref="taxon:1720084" /segment="4" /country="Israel" /collection_date="10-Jun-2015" /note="passage details: E1" gene 4..1707 /gene="HA" CDS 4..1707 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALJ33531.1" /db_xref="GI:938454699" /translation="MEKIVLLLAIASIVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCNLDGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSYIVEKINPA NDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKDSWSDHEASGVSSACPYQGRSSFFR NVVWLTKKNDAYPTIKKSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNPTTYISVGTS TLNQRLVPKIATRSKVNGQSGRMEFFWTILKSNDAINFESNGNFIAPENAYKIVKKGD STIMKSELEYSNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRN SPQGEKRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQRAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHRCDNECMESVRNGTYDYPQYS EEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRIC I" sig_peptide 4..51 /gene="HA" mat_peptide 52..1038 /gene="HA" /product="HA1" mat_peptide 1039..1704 /gene="HA" /product="HA2" ORIGIN 1 aaaatggaga aaatagtgct tcttcttgca atagccagta ttgtcaaaag tgatcagatt 61 tgcattggtt accatgcaaa caactcgaca gagcaggttg acacaataat ggaaaagaac 121 gtcactgtta cacacgccca agacatactg gaaaagacac acaacgggaa actctgcaat 181 ctagatggag tgaagcctct cattttaaga gattgtagtg tagctggatg gctcctcggg 241 aacccaatgt gcgatgagtt cctcaatgtg ccggaatggt cttacatagt ggagaaaatc 301 aatccagcca atgacctctg ttatccaggg aatttcaacg actatgaaga actgaaacac 361 ctattgagca gaataaacca ttttgagaaa attcagatca ttcccaaaga ttcttggtca 421 gatcatgaag cctcaggagt gagctcagca tgcccatacc aaggaagatc ctcctttttt 481 agaaatgttg tatggcttac caaaaagaac gatgcatacc caacaataaa gaaaagttac 541 aataatacta accaagaaga tcttttggta ctatggggga ttcaccatcc aaatgatgct 601 gcagagcaga caaggcttta tcaaaaccca actacctata tctccgttgg gacatcaaca 661 ctaaaccaga gattggtacc caaaatagct actagatcta aggtaaacgg gcaaagtgga 721 aggatggagt tcttttggac aattttaaaa tcgaatgatg caataaactt tgagagcaat 781 ggaaacttca ttgctccaga aaatgcatac aaaattgtca agaaaggaga ttcaacaatt 841 atgaaaagtg agttggaata tagtaactgc aacaccaagt gtcagactcc aataggggcg 901 ataaactcca gtatgccatt ccacaacatc caccctctca ccatcgggga atgccccaaa 961 tatgtgaaat caaacagatt agtccttgct actgggctca ggaatagccc tcaaggagag 1021 aaaagaagaa aaaagagagg actattcgga gccatagcag gttttataga gggaggatgg 1081 cagggaatgg tagatggttg gtatgggtac caccatagca acgagcaggg gagtgggtac 1141 gctgcagaca aagaatccac tcaaagggct atagatggag tcaccaataa ggtcaattca 1201 atcattgaca aaatgaacac ccagtttgag gctgttggaa gggaatttaa taacttagaa 1261 aggagaatag aaaatttgaa caagaagatg gaagacggat tcctagatgt ctggacctat 1321 aatgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat 1381 gtcaagaatc tttatgacaa ggtccgacta cagcttaggg ataatgcaaa ggagcttggt 1441 aacggctgtt tcgagttcta tcacagatgt gataatgaat gtatggaaag tgtaagaaac 1501 ggaacgtatg actatcctca atattcagaa gaagcaagat taaaaagaga ggaaataagt 1561 ggagtaaaat tggagtcaat aggaacttac caaatactgt caatttattc aacagtggcg 1621 agctccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga 1681 tcgctacaat gcagaatttg catttaaatt tgtgagttca aatt
  23. niman
    AlignSegment-IDNameScoreE-ValueIdentityEPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3103.50.000000e+001696/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001690/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3061.00.000000e+001688/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001687/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3049.90.000000e+001683/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001685/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3025.90.000000e+001682/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3014.90.000000e+001680/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3011.20.000000e+001659/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3007.50.000000e+001658/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3005.60.000000e+001658/1674 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)2998.20.000000e+001657/1674 (98%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)2994.50.000000e+001649/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)2994.50.000000e+001649/1663 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)2992.70.000000e+001654/1671 (98%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001675/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2983.50.000000e+001674/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2977.90.000000e+001673/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001671/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2972.40.000000e+001630/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001668/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2957.60.000000e+001669/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2957.60.000000e+001669/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2955.80.000000e+001626/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001669/1704 (97%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001668/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001668/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2955.80.000000e+001668/1703 (97%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)2948.40.000000e+001626/1641 (99%)EPI597813A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI537618A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373012A/Egypt/N04286/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372875A/Egypt/N0677/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI369180A/duck/Egypt/1120SMF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340165A/duck/Egypt/10228SF/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340154A/duck/Egypt/10118/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI340141A/chicken/Egypt/112SG/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340131A/chicken/Egypt/1117/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340122A/chicken/Egypt/1128/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340107A/chicken/Egypt/11184S/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI340102A/chicken/Egypt/1134SD/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340091A/duck/Egypt/11117SS/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373017A/Egypt/N05860/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001667/1704 (97%)EPI348151A/chicken/Egypt/11VIR4453-270/2010 (A/H5N1) segment 4 (HA)2944.70.000000e+001663/1698 (97%)EPI340118A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001670/1707 (97%)EPI597828A/goose/Egypt/1439FAOS/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI597811A/duck/Egypt/141AI/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI537617A/Egypt/N01753/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001666/1703 (97%)EPI393783A/Egypt/N00951/2012 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373022A/Egypt/N09407/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373015A/Egypt/N04284/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372851A/Egypt/N0544/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI369189A/chicken/Egypt/1188/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI340126A/chicken/Egypt/112AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340124A/chicken/Egypt/114AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340123A/chicken/Egypt/115AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340121A/chicken/Egypt/1146SF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340119A/duck/Egypt/1148SF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340100A/duck/Egypt/11211S/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340094A/duck/Egypt/1116AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338614A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338609A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI336862A/turkey/Jenin/341/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI628911A/chicken/F611/Egypt/2015(H5N1) (A/H5N1) segment 4 (HA)2941.00.000000e+001625/1642 (98%)EPI603902A/chicken/Egypt/1439CAL/2014 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI538767A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 4 (HA)2941.00.000000e+001658/1691 (98%)EPI372923A/Egypt/N7724/2011 (A/H5N1) segment 4 (HA)2939.10.000000e+001666/1704 (97%)EPI597819A/duck/Egypt/1468S/2014 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI557202A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 4 (HA)2937.30.000000e+001664/1701 (97%)EPI493430A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI393786A/Egypt/N02137/2012 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI373019A/Egypt/N04285/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI373018A/Egypt/N00002/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI372859A/Egypt/N6322/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI372715A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI369181A/chicken/Egypt/1176/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340173A/chicken/Egypt/1021AD/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340160A/chicken/Egypt/10250SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340127A/chicken/Egypt/111AF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340109A/chicken/Egypt/111640V/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340082A/quail/Egypt/1171SG/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI338731A/goose/Egypt/M2794E/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI338613A/goose/Egypt/M2788A/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI338612A/goose/Egypt/M2788E/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI338611A/goose/Egypt/M2794A/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI255398A/Egypt/N09174/2009 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI603901A/chicken/Egypt/1436CAL/2014 (A/H5N1) segment 4 (HA)2935.40.000000e+001659/1694 (97%)EPI460395A/chicken/Egypt/1094/2010 (A/H5N1) segment 4 (HA)2935.40.000000e+001659/1694 (97%)EPI348155A/chicken/Egypt/11VIR4453-68/VRLCU/2011 (A/H5N1) segment 4 (HA)2935.40.000000e+001657/1691 (97%)EPI348154A/chicken/Egypt/11VIR4453-264/2010 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI372867A/Egypt/N6658/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340152A/duck/Egypt/10290SF/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340149A/duck/Egypt/10336SF/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340147A/chicken/Egypt/10132/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340134A/duck/Egypt/1113SD/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI340129A/chicken/Egypt/1174S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340116A/chicken/Egypt/116AF/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI340115A/duck/Egypt/1174SF/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340099A/duck/Egypt/1153/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340096A/chicken/Egypt/111945V/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI338608A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI255371A/Egypt/N02127/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI603908A/chicken/Egypt/1456CAL/2014 (A/H5N1) segment 4 (HA)2929.90.000000e+001658/1694 (97%)EPI574389A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 4 (HA)2928.10.000000e+001625/1644 (98%)EPI372915A/Egypt/N7592/2011 (A/H5N1) segment 4 (HA)2928.10.000000e+001664/1704 (97%)EPI255367A/Egypt/N01982/2010 (A/H5N1) segment 4 (HA)2928.10.000000e+001664/1704 (97%)EPI608785A/chicken/Israel/156/2015 (A/H5N1) segment 4 (HA)2926.20.000000e+001622/1641 (98%)EPI597827A/chicken/Egypt/147CA/2014 (A/H5N1) segment 4 (HA)2926.20.000000e+001666/1706 (97%)EPI597821A/chicken/Egypt/1411CAL/2014 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI373014A/Egypt/N04287/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001666/1706 (97%)EPI372883A/Egypt/N6774/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369193A/chicken/Egypt/121/2012 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369190A/duck/Egypt/11762s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369179A/chicken/Egypt/11506SF/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340144A/chicken/Egypt/10413SF/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI340097A/duck/Egypt/11221S/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340089A/duck/Egypt/11312S/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI603900A/turkey/Egypt/1419FAOS/2014 (A/H5N1) segment 4 (HA)2924.40.000000e+001657/1694 (97%)EPI348148A/chicken/Egypt/11VIR4453-59/VRLCU/2011 (A/H5N1) segment 4 (HA)2924.40.000000e+001653/1688 (97%)EPI603915A/duck/Egypt/153AL/2015 (A/H5N1) segment 4 (HA)2922.50.000000e+001612/1627 (99%)EPI493497A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI372931A/Egypt/N09966/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI372891A/Egypt/N6828/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI369186A/duck/Egypt/11685s/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI369185A/chicken/Egypt/11667s/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI369183A/chicken/Egypt/11672s/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340146A/chicken/Egypt/10347SF/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340110A/goose/Egypt/11162S/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI338730A/chicken/Egypt/S2938A/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI338729A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI287352A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI283813A/duck/Egypt/1068s/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI283811A/goose/Egypt/1057/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001661/1701 (97%)EPI283791A/chicken/Egypt/1034/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001661/1701 (97%)EPI255400A/Egypt/N09539/2009 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI348150A/chicken/Egypt/11VIR4453-138/VRLCU/2011 (A/H5N1) segment 4 (HA)2918.80.000000e+001660/1699 (97%)EPI557210A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001661/1702 (97%)EPI500117A/duck/Egypt/S6419C/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI500080A/turkey/Egypt/S6405E/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI493152A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI398575A/duck/Egypt/Q4596C/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI373021A/Egypt/N16789/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001663/1705 (97%)EPI372955A/Egypt/N14976/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI372947A/Egypt/N11470/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI369197A/chicken/Egypt/12186F-9/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI340098A/duck/Egypt/11106SF/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001663/1705 (97%)EPI340093A/chicken/Egypt/11124SF/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001663/1705 (97%)EPI338187A/harrier/Israel/531/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI597824A/chicken/Egypt/14126S/2014 (A/H5N1) segment 4 (HA)2911.40.000000e+001666/1709 (97%)EPI573314A/chicken/Egypt/14148CA/2014 (A/H5N1) segment 4 (HA)2911.40.000000e+001612/1630 (98%)EPI348162A/chicken/Egypt/11VIR4453-7/VRLCU/2010 (A/H5N1) segment 4 (HA)2911.40.000000e+001658/1699 (97%)EPI597826A/chicken/Egypt/141VI/2014 (A/H5N1) segment 4 (HA)2909.60.000000e+001663/1706 (97%)EPI573333A/chicken/Egypt/1427AF/2014 (A/H5N1) segment 4 (HA)2909.60.000000e+001651/1689 (97%)EPI550486A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI538807A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 4 (HA)2909.60.000000e+001633/1662 (98%)EPI538791A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 4 (HA)2909.60.000000e+001633/1662 (98%)EPI500085A/duck/Egypt/S6419E/2012 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI372939A/Egypt/N11126/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI369198A/chicken/Egypt/12186F-12/2012 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI348159A/chicken/Egypt/11VIR4453-137/VRLCU/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001651/1689 (97%)EPI340150A/duck/Egypt/10331SF/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340081A/chicken/Egypt/11529S/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI283815A/duck/Egypt/106d/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001659/1701 (97%)EPI283782A/chicken/Egypt/091317s/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI214881A/chicken/Egypt/0920-NLQP/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI500113A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI340114A/chicken/Egypt/117AF/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI340111A/chicken/Egypt/119AF/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI340088A/duck/Egypt/11175SF/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001662/1706 (97%)EPI283821A/duck/Egypt/1063s/2010 (A/H5N1) segment 4 (HA)2904.10.000000e+001658/1701 (97%)EPI283789A/chicken/Egypt/1029/2010 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI255394A/Egypt/N08835/2009 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI255375A/Egypt/N02770/2010 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI184804A/Egypt/N00585/2009 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI597820A/chicken/Egypt/1429AD/2014 (A/H5N1) segment 4 (HA)2900.40.000000e+001663/1708 (97%)EPI573334A/chicken/Egypt/141/2014 (A/H5N1) segment 4 (HA)2898.50.000000e+001644/1681 (97%)EPI573324A/duck/Egypt/1560S/2015 (A/H5N1) segment 4 (HA)2898.50.000000e+001600/1615 (99%)EPI573317A/chicken/Egypt/1575S/2015 (A/H5N1) segment 4 (HA)2898.50.000000e+001607/1626 (98%)EPI504989A/duck/Egypt/BSU-FA-1D/2012 (A/H5N1) segment 4 (HA)2898.50.000000e+001659/1704 (97%)EPI398585A/chicken/Egypt/S3802D/2011 (A/H5N1) segment 4 (HA)2898.50.000000e+001660/1705 (97%)EPI398582A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 4 (HA)2898.50.000000e+001660/1705 (97%)EPI398579A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 4 (HA)2898.50.000000e+001660/1705 (97%)EPI398578A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 4 (HA)2898.50.000000e+001660/1705 (97%)EPI398573A/chicken/Egypt/S3806A/2011 (A/H5N1) segment 4 (HA)2898.50.000000e+001660/1705 (97%)
  24. niman
    LOCUS KT792915 1734 bp cRNA linear VRL 20-OCT-2015 DEFINITION Influenza A virus (A/chicken/Gaza/799/2015(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT792915 VERSION KT792915.1 GI:938454696 KEYWORDS . SOURCE Influenza A virus (A/chicken/Gaza/799/2015(H5N1)) ORGANISM Influenza A virus (A/chicken/Gaza/799/2015(H5N1)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1734) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Highly pathogenic avian influenza A virus H5N1 isolated in Israel 2015 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1734) AUTHORS Shkoda,I., Lapin,K., Simanov,L., Alnakhal,R. and Lublin,A. TITLE Direct Submission JOURNAL Submitted (21-SEP-2015) Division of Avian Diseases, Kimron Veterinari Institute, P.O.Box 12, Bet Dagan 50250, Israel COMMENT ##Assembly-Data-START## Assembly Method :: SeqMan DNAStar v. DNASTAR Lasergene 8 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1734 /organism="Influenza A virus (A/chicken/Gaza/799/2015(H5N1))" /mol_type="viral cRNA" /strain="A/chicken/Gaza/799/2015" /serotype="H5N1" /host="chicken" /db_xref="taxon:1720085" /segment="4" /country="Israel" /collection_date="15-Jun-2015" /note="passage details: E1" gene 4..1707 /gene="HA" CDS 4..1707 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALJ33530.1" /db_xref="GI:938454697" /translation="MEKIVLLLAIASIVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCNLDGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSYIVEKINPA NDLCYPGNFNDYEELKHLLSTINHFEKIQIIPKDSWSDHEASGVSSPCPYQGRSSFFR NVVWLTKKNDAYPTIKKSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNPTTYISVGTS TLNQRLVPKIATRSKVNGQSGRMEFFWTILKSNDAINFESNGNFIAPENAYKIVKKGD STIMKSELEYSNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRN SPQGEKRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQRAIDG VTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENE RTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHRCDNECMESVRNGTYDYPQYS EEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRIC I" sig_peptide 4..51 /gene="HA" mat_peptide 52..1038 /gene="HA" /product="HA1" mat_peptide 1039..1704 /gene="HA" /product="HA2" ORIGIN 1 aaaatggaga aaatagtgct tcttcttgca atagccagta ttgtcaaaag tgatcagatt 61 tgcattggtt accatgcaaa caactcgaca gagcaggttg acacaataat ggaaaagaac 121 gtcactgtta cacacgccca agacatactg gaaaagacac acaacgggaa actctgcaat 181 ctagatggag tgaagcctct cattttaaga gattgtagtg tagctggatg gctcctcggg 241 aacccaatgt gcgatgagtt cctcaatgtg ccggaatggt cttacatagt ggagaaaatc 301 aatccagcca atgacctctg ttatccaggg aatttcaacg actatgaaga actgaaacac 361 ctattgagca caataaacca ttttgagaaa attcagatca ttcccaaaga ttcttggtca 421 gatcatgaag cctcaggagt gagctcacca tgcccatacc aaggaagatc ctcctttttt 481 agaaatgttg tatggcttac caaaaagaac gatgcatacc caacaataaa gaaaagttac 541 aataatacta accaagaaga tcttttggta ctatggggga ttcaccatcc aaatgatgct 601 gcagagcaga caaggcttta tcaaaaccca actacctata tctccgttgg gacatcaaca 661 ctaaaccaga gattggtacc caaaatagct actagatcta aggtaaacgg gcaaagtgga 721 aggatggagt tcttttggac aattttaaaa tcgaatgatg caataaactt tgagagcaat 781 ggaaacttca ttgctccaga aaatgcatac aaaattgtca agaaaggaga ttcaacaatt 841 atgaaaagtg agttggaata tagtaactgc aacaccaagt gtcagactcc aataggggcg 901 ataaactcca gtatgccatt ccacaacatc caccctctca ccatcgggga atgccccaaa 961 tatgtgaaat caaacagatt agtccttgct actgggctca ggaatagccc tcaaggagag 1021 aaaagaagaa aaaagagagg actattcgga gccatagcag gttttataga gggaggatgg 1081 cagggaatgg tagatggttg gtatgggtac caccatagca acgagcaggg gagtgggtac 1141 gctgcagaca aagaatccac tcaaagggct atagatggag tcaccaataa ggtcaattca 1201 atcattgaca aaatgaacac ccagtttgag gctgttggaa gggaatttaa taacttagaa 1261 aggagaatag aaaatttgaa caagaagatg gaagacggat tcctagatgt ctggacctat 1321 aatgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat 1381 gtcaagaatc tttatgacaa ggtccgacta cagcttaggg ataatgcaaa ggagcttggt 1441 aacggctgtt tcgagttcta tcacagatgt gataatgaat gtatggaaag tgtaagaaac 1501 ggaacgtatg actatcctca atattcagaa gaagcaagat taaaaagaga ggaaataagt 1561 ggagtaaaat tggagtcaat aggaacttac caaatactgt caatttattc aacagtggcg 1621 agctccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga 1681 tcgctacaat gcagaatttg catttaaatt tgtgagttca aattggagtt aaaa
  25. niman
    AlignSegment-IDNameScoreE-ValueIdentityEPI579781A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI579780A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)3109.00.000000e+001697/1704 (99%)EPI584778A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)3075.80.000000e+001691/1704 (99%)EPI573268A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI579006A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)3066.60.000000e+001689/1704 (99%)EPI573252A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573250A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI573244A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI579784A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579783A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579782A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579520A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579325A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI579324A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI574132A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001688/1704 (99%)EPI557138A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573248A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)3055.50.000000e+001684/1699 (99%)EPI642537A/Egypt/682/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001686/1704 (98%)EPI573260A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573246A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI584783A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI574125A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)3031.50.000000e+001683/1704 (98%)EPI550493A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)3020.40.000000e+001681/1704 (98%)EPI573322A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)3016.70.000000e+001660/1674 (99%)EPI573315A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)3013.00.000000e+001659/1673 (99%)EPI573321A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)3011.20.000000e+001659/1674 (99%)EPI573319A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)3009.30.000000e+001657/1671 (99%)EPI573330A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)3003.80.000000e+001658/1674 (99%)EPI557194A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI573328A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI573318A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)3000.10.000000e+001650/1663 (99%)EPI557178A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)2998.20.000000e+001676/1702 (98%)EPI500079A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500078A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI487342A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)2992.70.000000e+001676/1704 (98%)EPI500109A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)2989.00.000000e+001675/1704 (98%)EPI504991A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI504990A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)2987.20.000000e+001675/1704 (98%)EPI373013A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)2987.20.000000e+001676/1705 (98%)EPI348153A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)2983.50.000000e+001674/1704 (98%)EPI597822A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)2981.60.000000e+001675/1705 (98%)EPI557218A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)2981.60.000000e+001672/1701 (98%)EPI340133A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)2981.60.000000e+001674/1704 (98%)EPI603916A/duck/Egypt/154FAOFL/2015 (A/H5N1) segment 4 (HA)2977.90.000000e+001631/1640 (99%)EPI597815A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI500082A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI340135A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)2976.10.000000e+001673/1704 (98%)EPI338733A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338732A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI338616A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)2976.10.000000e+001674/1705 (98%)EPI608783A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608778A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI608777A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)2970.50.000000e+001630/1641 (99%)EPI600754A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001670/1701 (98%)EPI597812A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI372907A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001673/1705 (98%)EPI348152A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340138A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340101A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340087A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI340085A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI338615A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)2970.50.000000e+001672/1704 (98%)EPI608786A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI608780A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)2965.00.000000e+001629/1641 (99%)EPI597825A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597823A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597818A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI597816A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001672/1705 (98%)EPI557136A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)2965.00.000000e+001669/1701 (98%)EPI373011A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI372963A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340151A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340136A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI340104A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)2965.00.000000e+001671/1704 (98%)EPI550507A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI348158A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)2963.10.000000e+001670/1703 (98%)EPI608781A/turkey/Israel/274/2015 (A/H5N1) segment 4 (HA)2961.30.000000e+001627/1639 (99%)EPI373020A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001670/1704 (98%)EPI348160A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348157A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1702 (98%)EPI348156A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)2961.30.000000e+001669/1703 (98%)EPI608784A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608782A/turkey/Israel/174/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI608779A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)2959.50.000000e+001628/1641 (99%)EPI597817A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI597814A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI397334A/duck/Egypt/1111sg/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI373016A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340106A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340103A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340100A/duck/Egypt/11211S/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI340092A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001670/1704 (98%)EPI338618A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI338610A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)2959.50.000000e+001671/1705 (98%)EPI608787A/spur-winged lapwing/Israel/101/2015 (A/H5N1) segment 4 (HA)2953.90.000000e+001627/1641 (99%)EPI597813A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI550500A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI537618A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373012A/Egypt/N04286/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI372875A/Egypt/N0677/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI369180A/duck/Egypt/1120SMF/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340165A/duck/Egypt/10228SF/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340154A/duck/Egypt/10118/2010 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340141A/chicken/Egypt/112SG/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340131A/chicken/Egypt/1117/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340122A/chicken/Egypt/1128/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340107A/chicken/Egypt/11184S/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001670/1705 (97%)EPI340102A/chicken/Egypt/1134SD/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI340091A/duck/Egypt/11117SS/2011 (A/H5N1) segment 4 (HA)2953.90.000000e+001669/1704 (97%)EPI373017A/Egypt/N05860/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001668/1704 (97%)EPI348151A/chicken/Egypt/11VIR4453-270/2010 (A/H5N1) segment 4 (HA)2950.20.000000e+001664/1698 (97%)EPI340118A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 4 (HA)2950.20.000000e+001671/1707 (97%)EPI597828A/goose/Egypt/1439FAOS/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI597811A/duck/Egypt/141AI/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI537617A/Egypt/N01753/2014 (A/H5N1) segment 4 (HA)2948.40.000000e+001667/1703 (97%)EPI393783A/Egypt/N00951/2012 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373022A/Egypt/N09407/2010 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI373015A/Egypt/N04284/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI372851A/Egypt/N0544/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340126A/chicken/Egypt/112AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340124A/chicken/Egypt/114AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340123A/chicken/Egypt/115AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340121A/chicken/Egypt/1146SF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340119A/duck/Egypt/1148SF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI340094A/duck/Egypt/1116AF/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338614A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI338609A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001669/1705 (97%)EPI336862A/turkey/Jenin/341/2011 (A/H5N1) segment 4 (HA)2948.40.000000e+001668/1704 (97%)EPI628911A/chicken/F611/Egypt/2015(H5N1) (A/H5N1) segment 4 (HA)2946.50.000000e+001626/1642 (99%)EPI603902A/chicken/Egypt/1439CAL/2014 (A/H5N1) segment 4 (HA)2946.50.000000e+001661/1694 (98%)EPI538767A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 4 (HA)2946.50.000000e+001659/1691 (98%)EPI372923A/Egypt/N7724/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001667/1704 (97%)EPI369189A/chicken/Egypt/1188/2011 (A/H5N1) segment 4 (HA)2944.70.000000e+001668/1705 (97%)EPI597819A/duck/Egypt/1468S/2014 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI557202A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 4 (HA)2942.80.000000e+001665/1701 (97%)EPI493430A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001668/1705 (97%)EPI393786A/Egypt/N02137/2012 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373019A/Egypt/N04285/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI373018A/Egypt/N00002/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372859A/Egypt/N6322/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI372715A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI369181A/chicken/Egypt/1176/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340173A/chicken/Egypt/1021AD/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340160A/chicken/Egypt/10250SF/2010 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340127A/chicken/Egypt/111AF/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340109A/chicken/Egypt/111640V/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI340082A/quail/Egypt/1171SG/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338731A/goose/Egypt/M2794E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338613A/goose/Egypt/M2788A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338612A/goose/Egypt/M2788E/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI338611A/goose/Egypt/M2794A/2011 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI255398A/Egypt/N09174/2009 (A/H5N1) segment 4 (HA)2942.80.000000e+001667/1704 (97%)EPI603901A/chicken/Egypt/1436CAL/2014 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI460395A/chicken/Egypt/1094/2010 (A/H5N1) segment 4 (HA)2941.00.000000e+001660/1694 (97%)EPI348155A/chicken/Egypt/11VIR4453-68/VRLCU/2011 (A/H5N1) segment 4 (HA)2941.00.000000e+001658/1691 (98%)EPI372867A/Egypt/N6658/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340152A/duck/Egypt/10290SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340149A/duck/Egypt/10336SF/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340147A/chicken/Egypt/10132/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340134A/duck/Egypt/1113SD/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340129A/chicken/Egypt/1174S/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340116A/chicken/Egypt/116AF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI340115A/duck/Egypt/1174SF/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340099A/duck/Egypt/1153/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI340096A/chicken/Egypt/111945V/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI338608A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 4 (HA)2937.30.000000e+001667/1705 (97%)EPI255371A/Egypt/N02127/2010 (A/H5N1) segment 4 (HA)2937.30.000000e+001666/1704 (97%)EPI603908A/chicken/Egypt/1456CAL/2014 (A/H5N1) segment 4 (HA)2935.40.000000e+001659/1694 (97%)EPI348154A/chicken/Egypt/11VIR4453-264/2010 (A/H5N1) segment 4 (HA)2935.40.000000e+001665/1704 (97%)EPI574389A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 4 (HA)2933.60.000000e+001626/1644 (98%)EPI372915A/Egypt/N7592/2011 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI255367A/Egypt/N01982/2010 (A/H5N1) segment 4 (HA)2933.60.000000e+001665/1704 (97%)EPI597827A/chicken/Egypt/147CA/2014 (A/H5N1) segment 4 (HA)2931.80.000000e+001667/1706 (97%)EPI597821A/chicken/Egypt/1411CAL/2014 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI373014A/Egypt/N04287/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001667/1706 (97%)EPI372883A/Egypt/N6774/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369193A/chicken/Egypt/121/2012 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI369190A/duck/Egypt/11762s/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340144A/chicken/Egypt/10413SF/2010 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI340097A/duck/Egypt/11221S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001665/1704 (97%)EPI340089A/duck/Egypt/11312S/2011 (A/H5N1) segment 4 (HA)2931.80.000000e+001666/1705 (97%)EPI603900A/turkey/Egypt/1419FAOS/2014 (A/H5N1) segment 4 (HA)2929.90.000000e+001658/1694 (97%)EPI348148A/chicken/Egypt/11VIR4453-59/VRLCU/2011 (A/H5N1) segment 4 (HA)2929.90.000000e+001654/1688 (97%)EPI603915A/duck/Egypt/153AL/2015 (A/H5N1) segment 4 (HA)2928.10.000000e+001613/1627 (99%)EPI369179A/chicken/Egypt/11506SF/2011 (A/H5N1) segment 4 (HA)2928.10.000000e+001664/1704 (97%)EPI608785A/chicken/Israel/156/2015 (A/H5N1) segment 4 (HA)2926.20.000000e+001622/1641 (98%)EPI493497A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI372931A/Egypt/N09966/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI372891A/Egypt/N6828/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI369186A/duck/Egypt/11685s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001665/1705 (97%)EPI369185A/chicken/Egypt/11667s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI369183A/chicken/Egypt/11672s/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340146A/chicken/Egypt/10347SF/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI340110A/goose/Egypt/11162S/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI338730A/chicken/Egypt/S2938A/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI338729A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI287352A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI283813A/duck/Egypt/1068s/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI283811A/goose/Egypt/1057/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001662/1701 (97%)EPI283791A/chicken/Egypt/1034/2010 (A/H5N1) segment 4 (HA)2926.20.000000e+001662/1701 (97%)EPI255400A/Egypt/N09539/2009 (A/H5N1) segment 4 (HA)2926.20.000000e+001664/1704 (97%)EPI348150A/chicken/Egypt/11VIR4453-138/VRLCU/2011 (A/H5N1) segment 4 (HA)2924.40.000000e+001661/1699 (97%)EPI557210A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 4 (HA)2920.70.000000e+001662/1702 (97%)EPI500117A/duck/Egypt/S6419C/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI500080A/turkey/Egypt/S6405E/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI493152A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI398575A/duck/Egypt/Q4596C/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI373021A/Egypt/N16789/2010 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI372955A/Egypt/N14976/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI372947A/Egypt/N11470/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI369197A/chicken/Egypt/12186F-9/2012 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI340098A/duck/Egypt/11106SF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI340093A/chicken/Egypt/11124SF/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001664/1705 (97%)EPI338187A/harrier/Israel/531/2011 (A/H5N1) segment 4 (HA)2920.70.000000e+001663/1704 (97%)EPI597824A/chicken/Egypt/14126S/2014 (A/H5N1) segment 4 (HA)2917.00.000000e+001667/1709 (97%)EPI573314A/chicken/Egypt/14148CA/2014 (A/H5N1) segment 4 (HA)2917.00.000000e+001613/1630 (98%)EPI348162A/chicken/Egypt/11VIR4453-7/VRLCU/2010 (A/H5N1) segment 4 (HA)2917.00.000000e+001659/1699 (97%)EPI597826A/chicken/Egypt/141VI/2014 (A/H5N1) segment 4 (HA)2915.10.000000e+001664/1706 (97%)EPI573333A/chicken/Egypt/1427AF/2014 (A/H5N1) segment 4 (HA)2915.10.000000e+001652/1689 (97%)EPI550486A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI538807A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001634/1662 (98%)EPI538791A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 4 (HA)2915.10.000000e+001634/1662 (98%)EPI500085A/duck/Egypt/S6419E/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI372939A/Egypt/N11126/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI369198A/chicken/Egypt/12186F-12/2012 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI348159A/chicken/Egypt/11VIR4453-137/VRLCU/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001652/1689 (97%)EPI340150A/duck/Egypt/10331SF/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI340081A/chicken/Egypt/11529S/2011 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI283815A/duck/Egypt/106d/2010 (A/H5N1) segment 4 (HA)2915.10.000000e+001660/1701 (97%)EPI283782A/chicken/Egypt/091317s/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI214881A/chicken/Egypt/0920-NLQP/2009 (A/H5N1) segment 4 (HA)2915.10.000000e+001662/1704 (97%)EPI500113A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340114A/chicken/Egypt/117AF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340111A/chicken/Egypt/119AF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI340088A/duck/Egypt/11175SF/2011 (A/H5N1) segment 4 (HA)2909.60.000000e+001663/1706 (97%)EPI283821A/duck/Egypt/1063s/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001659/1701 (97%)EPI283789A/chicken/Egypt/1029/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI255394A/Egypt/N08835/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI255375A/Egypt/N02770/2010 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI184804A/Egypt/N00585/2009 (A/H5N1) segment 4 (HA)2909.60.000000e+001661/1704 (97%)EPI597820A/chicken/Egypt/1429AD/2014 (A/H5N1) segment 4 (HA)2905.90.000000e+001664/1708 (97%)EPI573334A/chicken/Egypt/141/2014 (A/H5N1) segment 4 (HA)2904.10.000000e+001645/1681 (97%)EPI573324A/duck/Egypt/1560S/2015 (A/H5N1) segment 4 (HA)2904.10.000000e+001601/1615 (99%)EPI573317A/chicken/Egypt/1575S/2015 (A/H5N1) segment 4 (HA)2904.10.000000e+001608/1626 (98%)EPI504989A/duck/Egypt/BSU-FA-1D/2012 (A/H5N1) segment 4 (HA)2904.10.000000e+001660/1704 (97%)EPI398585A/chicken/Egypt/S3802D/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398582A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398579A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398578A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)EPI398573A/chicken/Egypt/S3806A/2011 (A/H5N1) segment 4 (HA)2904.10.000000e+001661/1705 (97%)
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