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Pandemic Potentials Blog

Sequences (COVID)

  1. First BA.2.86 Sequence from Australia

    Started by niman,

    Australia/WA15238/2023 collected 8/22/23 Western Australia V483del detected

    • 3 replies
    • 416 views
    niman

  2. First BA.2.86 Sequence from South Korea

    Started by niman,

    South Korea/KDCA261693/2023 collected 8/16/23 Spike V483del NSP3 K1155R BA.2.86.1

    • 1 reply
    • 131 views
    niman

  3. First Two BA2.86 Sequences Submitted To GISAID From Denmark

    Started by niman,

    Denmark/DCGC-647676/2023 collected 7/24/23 Denmark/DCGC-647646/2023 collected 7/31/23 Spike ins16MPLF and V483del absent

    • 3 replies
    • 627 views
    niman

  4. Fourth BA.2.86 Sequence from France

    Started by niman,

    France/ARA-HCL723001017801/2023 Allier Auvergne-Rhone-Alpes collected 8/26/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1

    • 1 reply
    • 132 views
    niman

  5. First BA.2.86 Sequence from Colorado USA

    Started by niman,

    USA/CO-CDPHE-41186476/2023 Colorado Collected 8/19/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1

    • 1 reply
    • 124 views
    niman

  6. Eighth BA.2.86 Sequence from Gauteng South Africa

    Started by niman,

    South Africa/NICD-N56070/2023 Gauteng Collected 2023-08-23

    • 1 reply
    • 111 views
    niman

  7. Seventh BA.2.86 Sequence from Gauteng South Africa

    Started by niman,

    South Africa/NICD-N56080/2023 Gauteng collected 2023-08-22

    • 1 reply
    • 98 views
    niman

  8. Sixth BA.2.86 Sequence from Gauteng South Africa

    Started by niman,

    South Africa/NICD-N56079/2023 Gauteng collected 2023-08-18

    • 1 reply
    • 94 views
    niman

  9. Fourth BA.2.86 Sequence from Gauteng South Africa

    Started by niman,

    South Africa/NICD-N56089/2023 Gauteng Collected 2023-08-08

    • 3 replies
    • 144 views
    niman

  10. Fourth BA.2.86 Sequence from Mpumalanga South Africa

    Started by niman,

    South Africa/NICD-N56078/2023 Mpumalanga Collected 2023-08-21

    • 1 reply
    • 139 views
    niman

  11. First BA.2.86 Sequence from North West South Africa

    Started by niman,

    South Africa/NICD-N56072/2023 North West collected 8/22/23

    • 1 reply
    • 87 views
    niman

  12. Third BA.2.86 Sequence from Mpumalanga South Africa

    Started by niman,

    South Africa/NICD-N56063/2023 Mpumalanga collected 8/22/23

    • 1 reply
    • 100 views
    niman

  13. Fifth BA.2.86 Sequence from Thailand

    Started by niman,

    env/Thailand/CU-072/2023 Bangkok collected 7/28/23 Wastewater Spike ins16XXXF detected

    • 3 replies
    • 240 views
    niman

  14. First Four BA.2.86 Sequences from Thailand

    Started by niman,

    env/Thailand/CU-064/2023 env/Thailand/CU-074/2023 env/Thailand/CU-077/2023 env/Thailand/CU-082/2023 wastewater collected 7/28/83 from Bangkok

    • 8 replies
    • 823 views
    niman

  15. Second BA.2.86 Sequence from Israel

    Started by niman,

    Israel/SMC-7114868/2023 Be'er Ya'akov collected 2023-08-26 64% coverage

    • 1 reply
    • 202 views
    niman

  16. Twelfth BA.2.86 Sequence from Denmark

    Started by niman,

    Denmark/DCGC-658990/2023 collected 8/14/23 missing ins and dels from Spike NSP3 K1155R BA.2.86.1

    • 1 reply
    • 180 views
    niman

  17. Second BA.2.86 Sequence from England

    Started by niman,

    England/CLIMB-CM7YMG9C/2023 collected 8/16/23 Spike ins16MPLF and V483del present

    • 1 reply
    • 157 views
    niman

  18. First Two BA.2.86 Sequences from Herlev and Gentofte University Hospital Denmark

    Started by niman,

    Denmark/DCGC-658800/2023 Denmark/DCGC-658505/2023 Both collected 8/7/23 Spike ins16MPLF and V483del present in both NSP3 K1155R BA.2.86.1

    • 1 reply
    • 163 views
    niman

  19. First BA.2.86 Sequence from Cuyahoga County Ohio

    Started by niman,

    USA/OH-ODH-SC3032044/2023 collected 7/29/23 Spike ins16MPLF and V483del present NSP3 K1155R BA.2.86.1

    • 1 reply
    • 140 views
    niman

  20. Fourth BA.2.86 Sequence from Denmark

    Started by niman,

    Denmark/DCGC-647853/2023 collected 8/14/23 Spike ins16MPLF and V483del absent

    • 1 reply
    • 101 views
    niman

  21. First BA.2.86 Sequence from Mpumalanga South Africa

    Started by niman,

    South Africa/NICD-N55999/2023 collected 7/28/23 Spike ins16MPLF and V460del absent

    • 1 reply
    • 94 views
    niman

  22. First BA.2.86 Sequence from Odense University Hospital

    Started by niman,

    Denmark/DCGC-647694/2023 collected 8/7/23 Spike ins16MPLF and V483del present NSP3 K1155R BA.2.86.1

    • 1 reply
    • 150 views
    niman

  23. First USA BA.2.86 Sequence Submitted to GISAID

    Started by niman,

    USA/MI-UM-10052670540/2023 collected 8/3/23 Spike ins16MPLF and V483del present

    • 1 reply
    • 112 views
    niman

  24. First BA2.86 Sequence Submitted To GISAID

    Started by niman,

    Israel/ICH-741198454/2023 collected 7/31/23. Contains Spike ins16MPLF and V483del.

    • 1 reply
    • 112 views
    niman

  25. Seven UK Variant B.1.1.7 SARS CoV2 Sequences From Alderley Park England With E484K

    Started by niman,

    COG-UK has released (at GISAID) seven UK variant (B.1.1.7) sequences collected Feb 15 - Mar 1 in Alderley Park England/ALDP-12C5266/2021 2/15 England/ALDP-1366BC5/2021 2/26 England/ALDP-1366D1A/2021 2/26 England/ALDP-134D58A/2021 2/23 England/ALDP-136DBBF/2021 2/21 England/ALDP-136DB0A/2021 3/1 England/ALDP-13630D8/2021 2/26

    • 7 replies
    • 617 views
    niman

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