Sequences (COVID)
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Sequences have not been released for the B.1.1.7 cases below. Assigned UNK numbers will be updated upon release USA/SC-DHEC-UNK1003/2021 Pee Dee South Carolina Low Country 2 Pee Dee 1 https://scdhec.gov/covid19/mis-c-covid-19-variants
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Sequences have not been released for the B.1.1.7 cases below. Assigned UNK numbers will be updated upon release USA/SC-DHEC-UNK1002/2021 Lowcountry South Carolina Low Country 2 Pee Dee 1 https://scdhec.gov/covid19/mis-c-covid-19-variants
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Sequences for most of the 501.v2 variant cases cited below on the South Carolina website have not been released. The assigned UNK numbers will be updated upon release. USA/SC-DHEC-UNK999/2021 Lowcountry South Carolina USA/SC-DHEC-UNK1000/2021 Lowcountry South Carolina USA/SC-DHEC-UNK1001/2021 Lowcountry South Carolina Low Country 5 Midlands 1 Pee Dee 15 https://scdhec.gov/covid19/mis-c-covid-19-variants
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Sequences for most of the 501.v2 variant cases cited below on the South Carolina website have not been released. The assigned UNK numbers will be updated upon release. USA/SC-DHEC-UNK998/2021 Midlands South Carolina Low Country 5 Midlands 1 Pee Dee 15 https://scdhec.gov/covid19/mis-c-covid-19-variants
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Sequences for most of the 501.v2 variant cases cited below on the South Carolina website have not been released. The assigned UNK numbers will be updated upon release. USA/SC-DHEC-UNK994/2021 Pee Dee South Carolina USA/SC-DHEC-UNK995/2021 Pee Dee South Carolina USA/SC-DHEC-UNK996/2021 Pee Dee South Carolina USA/SC-DHEC-UNK997/2021 Pee Dee South Carolina USA/SC-CDC-LC0010408/2021 1/26 South Carolina Low Country 5 Midlands 1 Pee Dee 15 https://scdhec.gov/covid19/mis-c-covid-19-variants
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Oregon SARS-CoV-2 Genome Sequencing Center has released (at GISAID) a UK variant (B.1.1.7) sequence collected Feb 8 in Lane County USA/OR-OHSU-PHL00043/2021 2/8 49M Lane County Oregon
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Oregon SARS-CoV-2 Genome Sequencing Center has released (at GISAID) a UK variant (B.1.1.7) sequence collected Feb 3 in Marion County USA/OR-OHSU-PHL00032/2021 2/3 10F Marion County Oregon
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Sequences from the 90 confirmed cases described below have not been released. Assigned UNK numbers will be updated upon release. USA/MI-MDHHS-UNK903/2021Ionia Michigan USA/MI-MDHHS-UNK904/2021Ionia Michigan USA/MI-MDHHS-UNK905/2021Ionia Michigan USA/MI-MDHHS-UNK906/2021Ionia Michigan USA/MI-MDHHS-UNK907/2021Ionia Michigan USA/MI-MDHHS-UNK908/2021Ionia Michigan USA/MI-MDHHS-UNK909/2021Ionia Michigan USA/MI-MDHHS-UNK910/2021Ionia Michigan USA/MI-MDHHS-UNK911/2021Ionia Michigan USA/MI-MDHHS-UNK912/2021Ionia Michigan USA/MI-MDHHS-UNK913/2021Ionia Michigan USA/MI-MDHHS-UNK914/2021Ionia Michigan USA/MI-MDHHS-UNK915/2021Ionia Michigan USA/MI-MDHHS…
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Pandemic Response Lab has released (at GISAID) 49 UK variant (B.1.1.7) sequences collected Feb 6-15 USA/NY-PRL-2021_02_17_00L04/2021 2/13 58M New York New York USA/NY-PRL-2021_02_17_00K21/2021 2/13 30F New York New York USA/NY-PRL-2021_02_17_00I12/2021 2/13 50F New York New York USA/NY-PRL-2021_02_17_00E19/2021 2/13 53F New York New York USA/NY-PRL-2021_02_17_00D05/2021 2/15 71F New York New York USA/NY-PRL-2021_02_17_00C11/2021 2/15 52F New York New York USA/NY-PRL-2021_02_15_03H02/2021 2/14 58F New York New York USA/NY-PRL-2021_02_15_03G03/2021 2/14 21M New York New York USA/NY-PRL-2021_02_15_03C01/2021 2/13 12M New York New York USA/NY-PRL…
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National Institute of Infectious Diseases has released (at GISAID) a UK variant (B.1.1.7) sequence collected Feb 11 Japan/IC-0793/2021 2/11 Japan
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UW Virology Lab has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 28 USA/NY-UW-NW66056951/2021 1/28 New York
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CDC has released (at GISAID) four UK variant (B.1.1.7) sequences collected Jan 4-21 from New York USA/NY-CDC-9NH8-9097/2021 1/20 41 New York USA/NY-CDC-9NRS-9173/2021 1/4 32 New York USA/NY-CDC-9NHD-9098/2021 1/20 43 New York USA/NY-CDC-STM-000003059/2021 1/16 43M New York
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NYCPHL has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 29 from New York USA/NY-NYCPHL-002970/2021 1/29 57M New York New York
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NYCPHL has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 27 from Jamaica USA/NY-NYCPHL-002864/2021 1/27 30M Jamaica New York
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NYCPHL has released (at GISAID) two UK variant (B.1.1.7) sequence collected Jan 27 from Corona USA/NY-NYCPHL-002873/2021 1/27 64F Corona New York
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NYCPHL has released (at GISAID) two UK variant (B.1.1.7) sequences collected Jan 19 from Harlem USA/NY-NYCPHL-002554/2021 1/19 19F Harlem New York
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NYCPHL has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 15 from New York USA/NY-NYCPHL-002581/2021 1/15 30F New York New York
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Grubaugh Lab has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 6 from Flushing USA/NY-Yale-S224/2021 1/6 Flushing New York
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The 501.v2 sequence described below has not been released. The UNK number will be updated upon release. USA/NY-Wadsworth-UNK993/2021 Nassau County New York USA/NY-PRL-20210210_01G08/2021 New York The South African coronavirus variant has been identified in a New York state resident for the first time, Gov. Andrew Cuomo announced Sunday. The variant was identified in a Nassau County resident, Cuomo said. Sequencing of the mutant strain was done by a New York City–based commercial lab and verified at the Wadsworth Center in Albany. https://www.radio.com/1010wins/news/state/south-african-coronavirus-variant-found-in-ny-resident
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New York University School of Medicine has released (at GISAID) two UK variant (B.1.1.7) sequences collected Jan 15-Feb 1 from Nassau County USA/NY-NYULH72/2021 2/1 35F Nassau County New York USA/NY-NYULH71/2021 1/15 82F Nassau County New York
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New York University School of Medicine has released (at GISAID) two UK variant (B.1.1.7) sequences collected Feb 2 from Suffolk County USA/NY-NYULH74/2021 2/2 45M Suffolk County New York USA/NY-NYULH73/2021 2/2 30F Suffolk County New York
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New York University School of Medicine has released (at GISAID) two UK variant (B.1.1.7) sequences collected Jan 30-Feb 9 from Manhattan USA/NY-NYULH78/2021 1/30 66M Manhattan New York USA/NY-NYULH76/2021 2/9 57F Manhattan New York
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New York University School of Medicine has released (at GISAID) a UK variant (B.1.1.7) sequence collected Feb 7-9 from Brooklyn USA/NY-NYULH80/2021 2/8 66F Brooklyn New York USA/NY-NYULH77/2021 2/7 81M Brooklyn New York USA/NY-NYULH75/2021 2/9 36F Brooklyn New York
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Wadsworth has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 31-Feb 3 from Queens USA/NY-Wadsworth-21018160-01/2021 1/26 82M Bronx New York USA/NY-Wadsworth-21018128-01/2021 2/2 70F Bronx New York USA/NY-Wadsworth-21018127-01/2021 2/1 82F Bronx New York
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- 3 replies
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Wadsworth has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 31-Feb 3 from Queens USA/NY-Wadsworth-21019365-01/2021 2/3 29M Queens New York USA/NY-Wadsworth-21018153-01/2021 1/31 60M Queens New York
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- 2 replies
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