niman

Align Segment-ID Name Score E-Value Identity EPI749505 A/Environment/Qinghai/39266/2015 (A/H5N2) segment 4 (HA) 3140.4 0.000000e+00 1704/1704 (100%) EPI749497 A/Environment/Qinghai/42934/2015 (A/H5N2) segment 4 (HA) 3118.3 0.000000e+00 1698/1704 (99%) EPI749481 A/Environment/Hubei/45047/2015 (A/H5N2) segment 4 (HA) 3107.2 0.000000e+00 1696/1704 (99%) EPI749489 A/Environment/Hubei/45046/2015 (A/H5N2) segment 4 (HA) 3105.3 0.000000e+00 1695/1704 (99%) EPI749473 A/Environment/Chongqing/45355/2015 (A/H5N2) segment 4 (HA) 3062.9 0.000000e+00 1688/1704 (99%) EPI703601 A/duck/Eastern China/S0131/2014 (A/H5N2) segment 4 (HA) 3062.9 0.000000e+00 1688/1704 (99%) EPI585595 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI585589 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI585586 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI573242 A/Common Teal/Korea/H844/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI561646 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI561626 A/mallard/Korea/H207/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI561605 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI561591 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI561529 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI561508 A/bean goose/Korea/H53/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI561341 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 4 (HA) 3035.2 0.000000e+00 1684/1705 (98%) EPI585594 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585592 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585591 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585590 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585582 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585581 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585579 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585577 A/baikal teal/Korea/1437/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI573199 A/breeder chicken/Korea/H1068/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI573197 A/chicken/Korea/H881/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI561674 A/bean goose/Korea/H328/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI561612 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI561577 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI561570 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI561563 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI561542 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI561522 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 4 (HA) 3029.6 0.000000e+00 1683/1705 (98%) EPI585593 A/baikal teal/Korea/2414/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI585587 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI585584 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI585583 A/baikal teal/Korea/1449/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI561705 A/bean goose/Korea/H40/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI561667 A/mallard/Korea/H297/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI561653 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI561633 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI509704 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 4 (HA) 3024.1 0.000000e+00 1682/1705 (98%) EPI585580 A/baikal teal/Korea/1446/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI573208 A/gadwall/Korea/H1351/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI573200 A/Korean native chicken/Korea/H1139/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1682/1706 (98%) EPI573196 A/broiler duck/Korea/H651/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI573194 A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561697 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561681 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561660 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561598 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561360 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561348 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561336 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561204 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561196 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561187 A/waterfowl/Korea/S005/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI517161 A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 4 (HA) 3018.5 0.000000e+00 1681/1705 (98%) EPI561690 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 4 (HA) 3016.7 0.000000e+00 1681/1705 (98%) EPI585588 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 4 (HA) 3013.0 0.000000e+00 1680/1705 (98%) EPI585585 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 4 (HA) 3013.0 0.000000e+00 1680/1705 (98%) EPI573192 A/breeder chicken/Korea/H503/2014 (A/H5N8) segment 4 (HA) 3013.0 0.000000e+00 1680/1705 (98%) EPI561556 A/Coot/Korea/H81/2014 (A/H5N8) segment 4 (HA) 3013.0 0.000000e+00 1680/1705 (98%) EPI561549 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 4 (HA) 3013.0 0.000000e+00 1680/1705 (98%) EPI561515 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 4 (HA) 3013.0 0.000000e+00 1680/1705 (98%) EPI509709 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 4 (HA) 3013.0 0.000000e+00 1680/1705 (98%) EPI585578 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 4 (HA) 3007.5 0.000000e+00 1679/1705 (98%) EPI573240 A/breeder duck/Korea/H345/2014 (A/H5N8) segment 4 (HA) 3007.5 0.000000e+00 1679/1705 (98%) EPI573203 A/chicken/Korea/H1292/2014 (A/H5N8) segment 4 (HA) 3007.5 0.000000e+00 1679/1705 (98%) EPI573195 A/breeder chicken/Korea/H818/2014 (A/H5N8) segment 4 (HA) 3007.5 0.000000e+00 1679/1705 (98%) EPI718280 A/ostrich/Korea/H829/2014 (A/H5N8) segment 4 (HA) 3001.9 0.000000e+00 1678/1705 (98%) EPI573207 A/chicken/Korea/H1350/2014 (A/H5N8) segment 4 (HA) 3001.9 0.000000e+00 1679/1706 (98%) EPI573205 A/Korean native chicken/Korea/H1299/2014 (A/H5N8) segment 4 (HA) 3001.9 0.000000e+00 1678/1705 (98%) EPI573201 A/chicken/Korea/H1236/2014 (A/H5N8) segment 4 (HA) 3001.9 0.000000e+00 1679/1706 (98%) EPI573198 A/broiler duck/Korea/H959/2014 (A/H5N8) segment 4 (HA) 3001.9 0.000000e+00 1678/1705 (98%) EPI561619 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 4 (HA) 3001.9 0.000000e+00 1678/1705 (98%) EPI573241 A/breeder duck/Korea/H566/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573218 A/Korean native chicken/Korea/H1687/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573217 A/broiler duck/Korea/H1685/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573216 A/broiler duck/Korea/H1683/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573212 A/Korean native chicken/Korea/H1554/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573211 A/goose/Korea/H1545/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573209 A/broiler duck/Korea/H1413/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573204 A/goose/Korea/H1296/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573202 A/chicken/Korea/H1268/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1678/1706 (98%) EPI542628 A/mallard/Korea/W452/2014 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1677/1705 (98%) EPI573219 A/goose/Korea/H1689/2014 (A/H5N8) segment 4 (HA) 2990.8 0.000000e+00 1676/1705 (98%) EPI573213 A/broiler duck/Korea/H1556/2014 (A/H5N8) segment 4 (HA) 2990.8 0.000000e+00 1676/1705 (98%) EPI573220 A/goose/Korea/H1698/2014 (A/H5N8) segment 4 (HA) 2985.3 0.000000e+00 1675/1705 (98%) EPI573210 A/broiler duck/Korea/H1414/2014 (A/H5N8) segment 4 (HA) 2985.3 0.000000e+00 1675/1705 (98%) EPI573206 A/breeder duck/Korea/H1343/2014 (A/H5N8) segment 4 (HA) 2985.3 0.000000e+00 1675/1705 (98%) EPI550849 A/duck/England/36226/14 (A/H5N8) segment 4 (HA) 2985.3 0.000000e+00 1675/1705 (98%) EPI550848 A/duck/England/36038/14 (A/H5N8) segment 4 (HA) 2985.3 0.000000e+00 1675/1705 (98%) EPI553349 A/wigeon/Sakha/1/2014 (A/H5N8) segment 4 (HA) 2979.8 0.000000e+00 1674/1705 (98%) EPI691836 A/gull Germany-NI/R45/2015 (A/H5N8) segment 4 (HA) 2976.1 0.000000e+00 1673/1705 (98%) EPI573228 A/broiler duck/Korea/H1755/2014 (A/H5N8) segment 4 (HA) 2974.2 0.000000e+00 1673/1705 (98%) EPI573227 A/breeder duck/Korea/H1752/2014 (A/H5N8) segment 4 (HA) 2974.2 0.000000e+00 1673/1705 (98%) EPI573222 A/broiler duck/Korea/H1733/2014 (A/H5N8) segment 4 (HA) 2974.2 0.000000e+00 1673/1705 (98%) EPI573215 A/breeder duck/Korea/H1596/2014 (A/H5N8) segment 4 (HA) 2974.2 0.000000e+00 1673/1705 (98%) EPI573214 A/broiler duck/Korea/H1582/2014 (A/H5N8) segment 4 (HA) 2974.2 0.000000e+00 1673/1705 (98%) EPI547673 A/duck/England/36254/14 (A/H5N8) segment 4 (HA) 2974.2 0.000000e+00 1673/1705 (98%) EPI576384 A/MuteSwan/Sweden/SVA150311KU0277/SZ502/2015 (A/H5N8) segment 4 (HA) 2970.5 0.000000e+00 1672/1705 (98%) EPI837544 A/broiler duck/Korea/H2194/2015 (A/H5N8) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI837541 A/breeder duck/Korea/H2086/2015 (A/H5N8) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI823940 A/duck/Hubei/SZY250/2016 (A/H5N2) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI750106 A/chicken/Taiwan/01174/2015 (A/H5N3) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI750098 A/goose/Taiwan/01038/2015 (A/H5N3) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI588968 A/chicken/Taiwan/a174/2015 (A/H5N3) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI576391 A/MuteSwan/Sweden/SVA150313KU0141/SZ543/2015 (A/H5N8) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI573638 A/crane/Kagoshima/KU13/2014(H5N8) (A/H5N8) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI573239 A/mallard/Korea/H1924-6/2014 (A/H5N8) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI573229 A/broiler duck/Korea/H1763/2014 (A/H5N8) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI573224 A/broiler duck/Korea/H1739/2014 (A/H5N8) segment 4 (HA) 2968.7 0.000000e+00 1672/1705 (98%) EPI750170 A/goose/Taiwan/01031/2015 (A/H5N2) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI750146 A/duck/Taiwan/01006/2015 (A/H5N2) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI690736 A/goose/Taiwan/TNO14/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI690704 A/goose/Taiwan/TNO10/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI690680 A/goose/Taiwan/TNO7/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI690648 A/goose/Taiwan/TNO3/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI690616 A/goose/Taiwan/TNC13/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI690584 A/goose/Taiwan/TNC9/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI690536 A/goose/Taiwan/TNC3/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI687239 A/turkey/Germany/AR3390-L00939/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI624535 A/scarlet_ibis/Germany/AR44-L01279/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI588976 A/duck/Taiwan/a068/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI573235 A/Korean native chicken/Korea/H1903/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI573233 A/Korean native chicken/Korea/H1847/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI573231 A/broiler duck/Korea/H1839/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI573225 A/broiler duck/Korea/H1745/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI573223 A/broiler duck/Korea/H1734/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI573221 A/broiler duck/Korea/H1731/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI573179 A/duck/Netherlands/14015898/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI556967 A/chicken/Germany-MV/R153/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI555126 A/stork/Germany-MV/R24/2015 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI552746 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI548493 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI548485 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI547678 A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 4 (HA) 2963.1 0.000000e+00 1671/1705 (98%) EPI586534 A/chicken/BC/FAV22/2014 (A/H5N2) segment 4 (HA) 2959.5 0.000000e+00 1671/1706 (97%) EPI837568 A/broiler duck/Korea/H2649/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837567 A/broiler duck/Korea/H2641/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837566 A/broildr duck/Korea/H2637/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837563 A/broiler duck/Korea/H2618/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837548 A/wild bird/Korea/H2291/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837547 A/wild bird/Korea/H2290/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837545 A/broiler duck/Korea/H2266/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837543 A/broiler duck/Korea/H2116/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI837542 A/mallard/Korea/H2102/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI750178 A/goose/Taiwan/01040/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI750162 A/goose/Taiwan/01023/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI750154 A/goose/Taiwan/01022/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI750138 A/goose/Taiwan/01039/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690776 A/goose/Taiwan/TNO19/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690768 A/goose/Taiwan/TNO18/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690760 A/goose/Taiwan/TNO17/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690728 A/goose/Taiwan/TNO13/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690720 A/goose/Taiwan/TNO12/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690712 A/goose/Taiwan/TNO11/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690688 A/goose/Taiwan/TNO8/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690632 A/goose/Taiwan/TNO1/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690624 A/goose/Taiwan/TNC14/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690608 A/goose/Taiwan/TNC12/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690592 A/goose/Taiwan/TNC10/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690576 A/goose/Taiwan/TNC8/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690568 A/goose/Taiwan/TNC7/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690560 A/goose/Taiwan/TNC6/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690528 A/goose/Taiwan/TNC2/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690461 A/Cooper's hawk/Minnesota/198225/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI690363 A/mallard/Washington/196262/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI690329 A/mallard/Oregon/AH0003821/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI690255 A/American green-winged teal/Oregon/AH0012403/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI690248 A/American green-winged teal/Idaho/AH0011899/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI690159 A/wood duck/Oregon/AH0007257/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI690152 A/wood duck/Oregon/AH0007244/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI690145 A/Northern pintail/Oregon/AH0003967/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI690124 A/snow goose/Missouri/15-011246-1/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI687247 A/turkey/Germany/AR3382-L00937/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI662648 A/chicken/Miyazaki/2-4/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI662640 A/chicken/Yamaguchi/6/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI595055 A/common teal/Korea/KU-12/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI590726 A/turkey/Arkansas/7791-1/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI590712 A/turkey/Minnesota/7172-1/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI590692 A/chicken/Washington/3490-18/2015 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI586550 A/chicken/BC/FAV24/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI586518 A/chicken/BC/FAV20/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI586509 A/poultry/BC/FAV19/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI584079 A/turkey/BC/FAV14/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI576477 A/chicken/BC/FAV9/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI573298 A/turkey/BC/FAV10/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI573230 A/broiler duck/Korea/H1803/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI573226 A/Korean native chicken/Korea/H1747/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI573187 A/chicken/Netherlands/14016437/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI573171 A/Chicken/Netherlands/14015824/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI573163 A/chicken/Netherlands/14015766/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI569383 A/Northern pintail/Washington/40964/2014 (A/H5N2) segment 4 (HA) 2957.6 0.000000e+00 1671/1706 (97%) EPI566027 A/ibis/Germany-MV/R44/2015 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI554605 A/domestic duck/Germany-NI/R3468/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI548623 A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 4 (HA) 2957.6 0.000000e+00 1670/1705 (97%) EPI845903 A/mandarin duck/Gifu/2112D001/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI837569 A/breeder duck/Korea/H2675/2015 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI837562 A/broiler duck/Korea/H2606/2015 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI837557 A/broiler duck/Korea/H2531/2015 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI837553 A/broiler duck/Korea/H2400/2015 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI750130 A/goose/Taiwan/01026/2015 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI690520 A/goose/Taiwan/TNC1/2015 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI690420 A/American wigeon/Washington/195205/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690413 A/American wigeon/Washington/195198/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690385 A/mallard/Washington/196865/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690350 A/mallard/Oregon/195547/2014 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690343 A/Northern pintail/Washington/195365/2014 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690241 A/mallard/Idaho/AH0007413/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690234 A/mallard/Idaho/AH0007412/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690219 A/Northern pintail/Oregon/AH0003871/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690212 A/mallard/Oregon/AH0008887/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI690166 A/wood duck/Oregon/AH0007263/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI662744 A/chicken/Wisconsin/15-012160-1/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI662723 A/turkey/South Dakota/15-010371/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI590740 A/turkey/Minnesota/9845-4/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI590733 A/chicken/Kansas/8395-3/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI590719 A/turkey/Missouri/7458-1/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI588960 A/duck/Taiwan/a043/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI586542 A/chicken/BC/FAV23/2014 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI586526 A/chicken/BC/FAV21/2014 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1671/1707 (97%) EPI586493 A/poultry/BC/FAV15/2014 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI585092 A/pheasant/Washington/3147-2/2015 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI576470 A/chicken/BC/FAV8/2014 (A/H5N2) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI573234 A/broiler duck/Korea/H1864/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI573232 A/broiler duck/Korea/H1840/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI569390 A/gyrfalcon/Washington/41088-6/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI569376 A/guinea fowl/Oregon/41613-1/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI569372 A/chicken/Oregon/41613-2/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1670/1706 (97%) EPI553362 A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI553343 A/chicken/Miyazaki/7/2014 (A/H5N8) segment 4 (HA) 2952.1 0.000000e+00 1669/1705 (97%) EPI837565 A/duck/Korea/H2628/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI837564 A/duck/Korea/H2627/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI837554 A/broiler duck/Korea/H2405/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI837551 A/broiler duck/Korea/H2385/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI837546 A/broiler duck/Korea/H2278/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI778498 A/turkey/Minnesota/15-012582-1/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI778490 A/turkey/South Dakota/15-012511-2/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690454 A/Canada goose/Washington/197619/2014 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690447 A/mallard/Washington/195810/2014 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690427 A/mallard/Washington/195246/2014 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690336 A/bald eagle/Idaho/15-002892-2/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690322 A/mallard/Idaho/AH0005955/2014 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690276 A/mallard/Nevada/AH0006855/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690194 A/mallard/Idaho/AH0008597/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690180 A/Northern shoveler/Oregon/AH0007337/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690131 A/American wigeon/Utah/AH0007824/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI690121 A/Northern shoveler/Oregon/AH0007339/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI662737 A/chicken/Wisconsin/15-011595-1/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI662701 A/turkey/Wisconsin/15-012012-2/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI662624 A/chicken/Saga/1-1/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI620408 A/turkey/Iowa/11762-1/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI590699 A/chicken/Oregon/A01819044/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI587633 A/chicken/Iowa/04-20/2015 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI587521 A/American wigeon/BC/050-31/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI586501 A/poultry/BC/FAV17/2014 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI585084 A/turkey/California/K1500169-1.2/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI584823 A/domestic duck/Hungary/7341/2015 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI573654 A/crane/Kagoshima/KU41/2014(H5N8) (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI573646 A/crane/Kagoshima/KU21/2014(H5N8) (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1668/1705 (97%) EPI573281 A/turkey/Washington/61-22/2014 (A/H5N2) segment 4 (HA) 2946.5 0.000000e+00 1669/1706 (97%) EPI544756 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 4 (HA) 2946.5 0.000000e+00 1660/1693 (98%) EPI750114 A/duck/Taiwan/A3400/2015 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1670/1708 (97%) EPI553208 A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1666/1703 (97%) EPI845956 A/tundra swan/Tottori/C6nk/2014 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI837550 A/mallard/Korea/H2321/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI837549 A/mallard/Korea/H2304/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690784 A/goose/Taiwan/TNO20/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690752 A/goose/Taiwan/TNO16/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690744 A/goose/Taiwan/TNO15/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690696 A/goose/Taiwan/TNO9/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690672 A/goose/Taiwan/TNO6/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690656 A/goose/Taiwan/TNO4/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690640 A/goose/Taiwan/TNO2/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690600 A/goose/Taiwan/TNC11/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690552 A/goose/Taiwan/TNC5/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690544 A/goose/Taiwan/TNC4/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI690468 A/snowy owl/Wisconsin/198399/2015 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI690269 A/American wigeon/Oregon/AH0012525/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI690262 A/Canada goose/Oregon/AH0012452/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI690173 A/Northern shoveler/Oregon/AH0007332/2015 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI690138 A/mallard/Oregon/AH0003952/2015 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI662709 A/turkey/North Dakota/15-013049-1/2015 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI662688 A/turkey/North Dakota/15-011420-13/2015 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI662681 A/chicken/Montana/15-010559-1/2015 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI595138 A/greater white-fronted goose/Korea/K14-372-2/2014 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI595133 A/greater white-fronted goose/Korea/K14-371-4/2014 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI595124 A/greater white-fronted goose/Korea/K14-369-3/2014 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI595116 A/greater white-fronted goose/Korea/K14-367-4/2014 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI595107 A/mandarin duck/Korea/K14-367-1/2014 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI595094 A/mandarin duck/Korea/K14-366-1/2014 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI595079 A/mallard/Korea/N15-99/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI595066 A/mallard/Korea/KU3-2/2015 (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI590685 A/turkey/Minnesota/9892-2/2015 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI586558 A/chicken/BC/FAV25/2014 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI573664 A/crane/Kagoshima/KU53/2015(H5N8) (A/H5N8) segment 4 (HA) 2941.0 0.000000e+00 1667/1705 (97%) EPI573271 A/chicken/Washington/61-9/2014 (A/H5N2) segment 4 (HA) 2941.0 0.000000e+00 1668/1706 (97%) EPI595146 A/greater white-fronted goose/Korea/K14-374-1/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1705 (97%) EPI595082 A/mandarin duck/Korea/K14-363-1/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1705 (97%) EPI837573 A/mallard/Korea/H2891/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI837571 A/broiler duck/Korea/H2827/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI837555 A/breeder chicken/Korea/H2496/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI750122 A/goose/Taiwan/01019/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI690406 A/mallard/Oregon/195536/2014 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1667/1706 (97%) EPI690392 A/American wigeon/Washington/196336/2015 (A/H5N1) segment 4 (HA) 2935.4 0.000000e+00 1667/1706 (97%) EPI690315 A/mallard/Idaho/AH0005954/2014 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1667/1706 (97%) EPI690286 A/chicken/California/15-004912/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1667/1706 (97%) EPI662730 A/chicken/Nebraska/15-017990-5/2015 (A/H5N2) segment 4 (HA) 2935.4 0.000000e+00 1668/1707 (97%) EPI662716 A/chicken/Minnesota/15-013533-1/2015 (A/H5N2) segment 4 (HA) 2935.4 0.000000e+00 1667/1706 (97%) EPI662694 A/chicken/Nebraska/15-017897-1/2015 (A/H5N2) segment 4 (HA) 2935.4 0.000000e+00 1668/1707 (97%) EPI662632 A/chicken/Okayama/1-2/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI620422 A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 4 (HA) 2935.4 0.000000e+00 1668/1707 (97%) EPI590679 A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1658/1693 (97%) EPI588952 A/goose/Taiwan/a015/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI585111 A/eurasian wigeon/Netherlands/1/2015 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1658/1693 (97%) EPI573680 A/mallard duck/Kagoshima/KU116/2015(H5N8) (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI573672 A/mallard duck/Kagoshima/KU70/2015(H5N8) (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI573276 A/domestic duck/Washington/61-16/2014 (A/H5N2) segment 4 (HA) 2935.4 0.000000e+00 1667/1706 (97%) EPI573238 A/mallard/Korea/H2003/2014 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI573237 A/mallard/Korea/H1991/2014 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI573236 A/spot-billed duck/Korea/H1981/2014 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1666/1705 (97%) EPI837582 A/broiler duck/Korea/H3302/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837577 A/broiler duck/Korea/H3093/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837576 A/broiler duck/Korea/H3092/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837575 A/broiler duck/Korea/H3078/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837574 A/broiler duck/Korea/H2910/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837572 A/broiler duck/Korea/15LBM334/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837570 A/broiler duck/Korea/H2826/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837561 A/korean native chicken/Korea/H2598/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837556 A/broiler duck/Korea/H2517/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI837552 A/broiler duck/Korea/H2393/2015 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1665/1705 (97%) EPI778506 A/chicken/Iowa/15-013388-1/2015 (A/H5N2) segment 4 (HA) 2929.9 0.000000e+00 1667/1707 (97%) EPI690474 A/Canada goose/Kansas/197850/2015 (A/H5N2) segment 4 (HA) 2929.9 0.000000e+00 1667/1707 (97%) EPI690399 A/American wigeon/Washington/196340/2015 (A/H5N1) segment 4 (HA) 2929.9 0.000000e+00 1666/1706 (97%) EPI690378 A/Northern pintail/Washington/196271/2014 (A/H5N8) segment 4 (HA) 2929.9 0.000000e+00 1666/1706 (97%) EPI620436 A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 4 (HA) 2929.9 0.000000e+00 1667/1707 (97%) EPI573286 A/American green-winged teal/Washington/195750/2014 (A/H5N1) segment 4 (HA) 2929.9 0.000000e+00 1666/1706 (97%) EPI568474 A/green-winged teal/Korea/KU-12/2015 (A/H5) segment 4 (HA) 2929.9 0.000000e+00 1655/1690 (97%) EPI837581 A/broiler duck/Korea/H3301/2015 (A/H5N8) segment 4 (HA) 2924.4 0.000000e+00 1664/1705 (97%) EPI837579 A/broiler duck/Korea/H3104/2015 (A/H5N8) segment 4 (HA) 2924.4 0.000000e+00 1664/1705 (97%) EPI620457 A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 4 (HA) 2924.4 0.000000e+00 1666/1707 (97%) EPI620450 A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 4 (HA) 2924.4 0.000000e+00 1666/1707 (97%) EPI620443 A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 4 (HA) 2924.4 0.000000e+00 1666/1707 (97%) EPI620415 A/turkey/Iowa/13541-1/2015 (A/H5N2) segment 4 (HA) 2924.4 0.000000e+00 1666/1707 (97%) EPI596301 A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1649/1683 (97%) EPI596295 A/eurasian wigeon/Netherlands/2/2014 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1656/1693 (97%) EPI552776 A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1649/1683 (97%) EPI552768 A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1656/1693 (97%) EPI853979 A/chicken/BC/FAV2/2015 (A/H5N1) segment 4 (HA) 2918.8 0.000000e+00 1664/1706 (97%) EPI837580 A/broiler duck/Korea/H3298/2015 (A/H5N8) segment 4 (HA) 2918.8 0.000000e+00 1664/1706 (97%) EPI837560 A/breeder chicken/Korea/H2590/2015 (A/H5N8) segment 4 (HA) 2918.8 0.000000e+00 1663/1705 (97%) EPI837559 A/breeder chicken/Korea/H2565/2015 (A/H5N8) segment 4 (HA) 2918.8 0.000000e+00 1663/1705 (97%) EPI690440 A/peregrine falcon/Washington/196426/2014 (A/H5N8) segment 4 (HA) 2918.8 0.000000e+00 1664/1706 (97%) EPI690356 A/American wigeon/Washington/195968/2014 (A/H5N8) segment 4 (HA) 2918.8 0.000000e+00 1664/1706 (97%) EPI620429 A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 4 (HA) 2918.8 0.000000e+00 1665/1707 (97%) EPI837578 A/broiler duck/Korea/H3098/2015 (A/H5N8) segment 4 (HA) 2913.3 0.000000e+00 1663/1706 (97%) EPI837558 A/breeder chicken/Korea/H2553/2015 (A/H5N8) segment 4 (HA) 2913.3 0.000000e+00 1662/1705 (97%) EPI845368 A/mallard/Alaska/AH0088535/2016 (A/H5N2) segment 4 (HA) 2902.2 0.000000e+00 1662/1707 (97%) EPI543010 A/duck/Beijing/CT01/2014 (A/H5N8) segment 4 (HA) 2896.7 0.000000e+00 1594/1608 (99%) EPI837584 A/duck/Korea/16A02/2016 (A/H5N8) segment 4 (HA) 2885.6 0.000000e+00 1657/1705 (97%) EPI837583 A/breeder duck/Korea/16AQ17/2016 (A/H5N8) segment 4 (HA) 2885.6 0.000000e+00 1657/1705 (97%) EPI543002 A/duck/Beijing/FS01/2014 (A/H5N8) segment 4 (HA) 2885.6 0.000000e+00 1592/1608 (99%) EPI596289 A/eurasian wigeon/Netherlands/1/2014 (A/H5N8) segment 4 (HA) 2880.0 0.000000e+00 1620/1651 (98%) EPI552760 A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 4 (HA) 2880.0 0.000000e+00 1620/1651 (98%) EPI542617 A/duck/Beijing/FS01/2013 (A/H5N8) segment 4 (HA) 2880.0 0.000000e+00 1590/1608 (98%) EPI551149 A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1631/1668 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2857.9 0.000000e+00 1654/1707 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2857.9 0.000000e+00 1654/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2857.9 0.000000e+00 1654/1707 (96%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2841.3 0.000000e+00 1651/1707 (96%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2841.3 0.000000e+00 1651/1707 (96%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2835.7 0.000000e+00 1650/1707 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2835.7 0.000000e+00 1649/1706 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2835.7 0.000000e+00 1649/1706 (96%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2830.2 0.000000e+00 1649/1707 (96%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2830.2 0.000000e+00 1649/1707 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2830.2 0.000000e+00 1649/1707 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2830.2 0.000000e+00 1648/1706 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2824.6 0.000000e+00 1648/1707 (96%) EPI551143 A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 4 (HA) 2824.6 0.000000e+00 1583/1610 (98%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2819.1 0.000000e+00 1647/1707 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2813.6 0.000000e+00 1646/1707 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2808.0 0.000000e+00 1645/1707 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2802.5 0.000000e+00 1644/1707 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2791.4 0.000000e+00 1642/1707 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2791.4 0.000000e+00 1642/1707 (96%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 2780.3 0.000000e+00 1639/1706 (96%) EPI656626 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2780.3 0.000000e+00 1639/1706 (96%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2780.3 0.000000e+00 1640/1707 (96%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2780.3 0.000000e+00 1639/1706 (96%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2780.3 0.000000e+00 1639/1706 (96%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2780.3 0.000000e+00 1639/1706 (96%) EPI599346 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA) 2780.3 0.000000e+00 1638/1705 (96%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2776.6 0.000000e+00 1638/1706 (96%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1638/1706 (96%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2774.8 0.000000e+00 1639/1707 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1638/1706 (96%) EPI656650 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1638/1706 (96%) EPI656602 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1638/1706 (96%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1639/1707 (96%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1639/1707 (96%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1639/1707 (96%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1638/1706 (96%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1638/1706 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2774.8 0.000000e+00 1639/1707 (96%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2774.8 0.000000e+00 1638/1706 (96%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2774.8 0.000000e+00 1639/1707 (96%) EPI687547 A/Goose/ Guangdong /SSZYP/2015（H5N6） (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1637/1706 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1637/1706 (95%) EPI602491 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1636/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1637/1706 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1637/1706 (95%) EPI599292 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1637/1706 (95%) EPI593040 A/Environment/Jiangxi/23094/2013 (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1637/1706 (95%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2769.2 0.000000e+00 1638/1707 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2769.2 0.000000e+00 1637/1706 (95%) EPI768621 A/chicken/Wuxi/SC7393/2015(H5N6) (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1635/1705 (95%) EPI760097 A/feline/Guangdong/2/2015 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2763.7 0.000000e+00 1637/1707 (95%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2763.7 0.000000e+00 1637/1707 (95%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2763.7 0.000000e+00 1637/1707 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI680598 A/Environment/Zhejiang/21574/2014 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI656658 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI656642 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI645982 A/chicken/Jiangsu/WXS7393/2014 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1635/1705 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI599320 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI599313 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI580422 A/feline/Guangdong/2/2014(H5N6) (A/H5N6) segment 4 (HA) 2763.7 0.000000e+00 1636/1706 (95%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2763.7 0.000000e+00 1637/1707 (95%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2761.9 0.000000e+00 1633/1702 (95%) EPI749697 A/Environment/Jiangxi/10649/2014 (A/H5N6) segment 4 (HA) 2760.0 0.000000e+00 1635/1706 (95%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2758.2 0.000000e+00 1636/1707 (95%) EPI760089 A/feline/Guangdong/1/2015 (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI749705 A/Environment/Jiangxi/10717/2014 (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2758.2 0.000000e+00 1636/1707 (95%) EPI691378 A/ Guangdong /ZQ874/2015（H5N6） (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2758.2 0.000000e+00 1637/1708 (95%) EPI681288 A/goose/Zhejiang/925036/2014 (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI661735 A/duck/Guangdong/02.11 DGCP104-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI661719 A/duck/Guangdong/02.11 DGCP102-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI657498 A/environment/Jilin/04.25 NA004/2015(H5N6) (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI656722 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1636/1707 (95%) EPI656634 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI602103 A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI601941 A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI593036 A/Environment/Jiangxi/20983/2013 (A/H5N1) segment 4 (HA) 2758.2 0.000000e+00 1636/1707 (95%) EPI580408 A/feline/Guangdong/1/2014(H5N6) (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1635/1706 (95%) EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 2758.2 0.000000e+00 1634/1705 (95%) EPI645042 A/swine/Guangdong/2/2014 (A/H5N6) segment 4 (HA) 2756.3 0.000000e+00 1632/1702 (95%) EPI839170 A/Syrrhaptes paradoxus/Guangdong/ZH283/2015 (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI839147 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI775291 A/duck/Guangzhou/021/2014 (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI775283 A/duck/Guangzhou/018/2014 (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI749465 A/Environment/Hunan/18478/2014 (A/H5N1) segment 4 (HA) 2752.6 0.000000e+00 1635/1707 (95%) EPI703605 A/duck/Eastern China/S0908/2014 (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2752.6 0.000000e+00 1635/1707 (95%) EPI680606 A/Environment/Jiangxi/10733/2014 (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI680590 A/Environment/Hunan/18327/2014 (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI661847 A/duck/Guangdong/02.11 DGCP094-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI661831 A/duck/Guangdong/02.11 DGCP092-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI661727 A/duck/Guangdong/02.11 DGCP103-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1634/1706 (95%) EPI661663 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 4 (HA) 2752.6 0.000000e+00 1635/1707 (95%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2752.6 0.000000e+00 1635/1707 (95%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2752.6 0.000000e+00 1635/1707 (95%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2752.6 0.000000e+00 1635/1707 (95%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2752.6 0.000000e+00 1635/1707 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2748.9 0.000000e+00 1634/1707 (95%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2747.1 0.000000e+00 1634/1707 (95%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1635/1708 (95%) EPI681279 A/duck/Zhejiang/727041/2014 (A/H5N2) segment 4 (HA) 2747.1 0.000000e+00 1632/1705 (95%) EPI680550 A/Environment/Guangdong/79478/2014 (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI680542 A/Environment/Guangdong/79900/2014 (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI664421 A/chicken/Jilin/04.11 CCHSL007/2015(Mixed) (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI661839 A/duck/Guangdong/02.11 DGCP093-P/2015(Mixed) (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI657474 A/environment/Jilin/04.11 CCHSL012/2015(H5N6) (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI593896 A/duck/Guangzhou/41227/2014 (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI593889 A/Guangzhou/39715/2014 (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI590813 A/duck/Jiangxi/NCDZT1126/2014 (A/H5N6) segment 4 (HA) 2747.1 0.000000e+00 1633/1706 (95%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2747.1 0.000000e+00 1634/1707 (95%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2747.1 0.000000e+00 1634/1707 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2743.4 0.000000e+00 1633/1706 (95%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2741.5 0.000000e+00 1633/1707 (95%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2741.5 0.000000e+00 1634/1708 (95%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2741.5 0.000000e+00 1633/1707 (95%) EPI680614 A/Environment/Chongqing/28970/2014 (A/H5N6) segment 4 (HA) 2741.5 0.000000e+00 1634/1708 (95%) EPI661911 A/environment/Guangdong/04.15 SZBAXQshui2/2015(H5N6) (A/H5N6) segment 4 (HA) 2741.5 0.000000e+00 1632/1706 (95%) EPI661807 A/environment/Guangdong/02.11 DGCPSJ050/2015(Mixed) (A/H5N6) segment 4 (HA) 2741.5 0.000000e+00 1632/1706 (95%) EPI661799 A/environment/Guangdong/02.11 DGQTSJ046E/2015(Mixed) (A/H5N6) segment 4 (HA) 2741.5 0.000000e+00 1632/1706 (95%)

Isolate name: A/Environment/Qinghai/39266/2015 Isolate ID: EPI_ISL_219781 Passage details/history: E1 Type: A / H5N2 Lineage: Sample information Collection date: 2015-04-07 Host Environment Additional host information: Location: China Additional location information: Qinghai Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: WHO Chinese National Influenza Center Sample ID given by the submitting laboratory: Authors: Wang,Dayan; Li,Xiaodan; Zou,Shumei; Zhang,Ye; Bo,Hong; Li,Xiyan; Chen,Wenbing; Yang,Lei; Shu,Yuelong Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Environment/Qinghai/39266/2015-PB2 2280 EPI749502 PB1 A/Environment/Qinghai/39266/2015-PB1 2274 EPI749503 PA A/Environment/Qinghai/39266/2015-PA 2151 EPI749501 HA A/Environment/Qinghai/39266/2015-HA 1704 EPI749505 NP A/Environment/Qinghai/39266/2015-NP 1497 EPI749498 NA A/Environment/Qinghai/39266/2015-NA 1410 EPI749504 MP A/Environment/Qinghai/39266/2015-MP 982 EPI749500 NS A/Environment/Qinghai/39266/2015-NS 838 EPI749499 Submitter information Submitter: Yang, Lei Submission Date: 2016-05-09 Last modifier: Yang, Lei Last modified: 2016-05-09 Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China

The WHO Chinese National Influenza Center has released two full sets of clade 2.3.4.4 H5N2 sequences from Qinghai Lake collected in April 2015. Like the May 2016 H5N8 sequences, the outbreak was not reported by OIE http://www.oie.int/wahis_2/public\..\temp\reports/en_fup_0000019568_20160122_124732.pdf The H5 from these two collections were related to the H5N8 clade 2.3.4.4 outbreak in South Korea in 2014.

Align Segment-ID Name Score E-Value Identity EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 816/820 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1485.8 0.000000e+00 815/823 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 814/820 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 814/820 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 814/820 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 814/820 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 820/829 (98%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 813/820 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 810/822 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 815/830 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 815/830 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 814/830 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1439.7 0.000000e+00 808/822 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 808/824 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 812/831 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 811/830 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 811/830 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 811/830 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1423.0 0.000000e+00 805/822 (97%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1423.0 0.000000e+00 805/822 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 804/821 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 804/821 (97%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 805/823 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 805/824 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1415.7 0.000000e+00 803/821 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 803/822 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 803/822 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1397.2 0.000000e+00 805/829 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 799/821 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1388.0 0.000000e+00 798/821 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1376.9 0.000000e+00 798/824 (96%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1376.9 0.000000e+00 798/824 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1369.5 0.000000e+00 800/829 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1369.5 0.000000e+00 800/829 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1369.5 0.000000e+00 800/829 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1369.5 0.000000e+00 800/829 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1369.5 0.000000e+00 800/829 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1369.5 0.000000e+00 800/829 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1369.5 0.000000e+00 800/829 (96%)

Align Segment-ID Name Score E-Value Identity EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2675.1 0.000000e+00 1458/1463 (99%) EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2669.5 0.000000e+00 1457/1463 (99%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2669.5 0.000000e+00 1457/1463 (99%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2669.5 0.000000e+00 1457/1463 (99%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2669.5 0.000000e+00 1457/1463 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2532.9 0.000000e+00 1456/1498 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2531.0 0.000000e+00 1448/1487 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2527.3 0.000000e+00 1455/1498 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2523.6 0.000000e+00 1434/1468 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2505.2 0.000000e+00 1451/1498 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2505.2 0.000000e+00 1451/1498 (96%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2501.5 0.000000e+00 1416/1447 (97%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2499.6 0.000000e+00 1433/1473 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2499.6 0.000000e+00 1433/1473 (97%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI618666 A/mallard/Sweden/2213/2003 (A/H12N5) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI332954 A/Anas_platyrhynchos/Camargue/091863/09 (A/H10N7) segment 5 (NP) 2483.0 0.000000e+00 1447/1498 (96%) EPI251817 A/mallard/Sweden/86/2003 (A/H12N5) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI433356 A/mallard/Czech Republic/15902-12K/2009 (A/H11N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%) EPI182108 A/mallard/Netherlands/11/2007 (A/H6N5) segment 5 (NP) 2477.5 0.000000e+00 1446/1498 (96%) EPI102231 A/duck/Taiwan/WB29/99 (A/H6N1) segment 5 (NP) 2477.5 0.000000e+00 1446/1498 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2471.9 0.000000e+00 1445/1498 (96%) EPI618770 A/mallard/Sweden/52903/2006 (A/H10N9) segment 5 (NP) 2471.9 0.000000e+00 1445/1498 (96%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2471.9 0.000000e+00 1445/1498 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2471.9 0.000000e+00 1445/1498 (96%) EPI377571 A/mallard/Sweden/88/2005 (A/H0) segment 5 (NP) 2471.9 0.000000e+00 1444/1497 (96%) EPI251662 A/mallard/Netherlands/2/1999 (A/H3N5) segment 5 (NP) 2471.9 0.000000e+00 1444/1497 (96%) EPI102229 A/chicken/Taiwan/165/99 (A/H6N1) segment 5 (NP) 2471.9 0.000000e+00 1445/1498 (96%) EPI816848 A/turkey/Poland/09/2014 (A/H9N2) segment 5 (NP) 2470.1 0.000000e+00 1413/1451 (97%) EPI463226 A/mallard/Sweden/100580/2009 (A/H6N2) segment 5 (NP) 2470.1 0.000000e+00 1429/1475 (96%) EPI463224 A/mallard/Sweden/100559/2009 (A/H6N2) segment 5 (NP) 2470.1 0.000000e+00 1429/1475 (96%) EPI463221 A/mallard/Sweden/100537/2009 (A/H6N2) segment 5 (NP) 2470.1 0.000000e+00 1429/1475 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2468.2 0.000000e+00 1444/1498 (96%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI618589 A/mallard/Sweden/3328/2003 (A/H12N5) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI513561 A/mallard/Sweden/101180/2009 (A/H4N6) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI513540 A/mallard/Sweden/100881/2009 (A/H4N6) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI513501 A/mallard/Sweden/101431/2009 (A/H4N6) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI513487 A/mallard/Sweden/101298/2009 (A/H4N6) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI513217 A/mallard/Sweden/104793/2009 (A/H4N6) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI513210 A/mallard/Sweden/104690/2009 (A/H4N6) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI513206 A/mallard/Sweden/102250/2009 (A/H4N6) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2466.4 0.000000e+00 1443/1497 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2466.4 0.000000e+00 1444/1498 (96%) EPI618918 A/mallard/Sweden/51933/2006 (A/H10N9) segment 5 (NP) 2460.9 0.000000e+00 1443/1498 (96%) EPI618520 A/mallard/Sweden/7146/2004 (A/H9N2) segment 5 (NP) 2460.9 0.000000e+00 1443/1498 (96%) EPI618101 A/mallard/Sweden/396/2002 (A/H10N4) segment 5 (NP) 2460.9 0.000000e+00 1442/1497 (96%) EPI618052 A/mallard/Sweden/6869/2004 (A/H0) segment 5 (NP) 2460.9 0.000000e+00 1443/1498 (96%) EPI618010 A/mallard/Republic of Georgia/4/2010 (A/H1N1) segment 5 (NP) 2460.9 0.000000e+00 1442/1497 (96%) EPI514839 A/mallard/Sweden/1869/2003 (A/H4N6) segment 5 (NP) 2460.9 0.000000e+00 1443/1498 (96%)

Align Segment-ID Name Score E-Value Identity EPI868847 A/turkey/England/052131/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3947.4 0.000000e+00 2146/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3943.7 0.000000e+00 2145/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3943.7 0.000000e+00 2145/2151 (99%) EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3936.3 0.000000e+00 2143/2151 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3690.7 0.000000e+00 2101/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3666.7 0.000000e+00 2080/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3651.9 0.000000e+00 2096/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3640.9 0.000000e+00 2093/2153 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3629.8 0.000000e+00 2070/2122 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3627.9 0.000000e+00 2069/2121 (97%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3613.2 0.000000e+00 2086/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3613.2 0.000000e+00 2086/2151 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3607.6 0.000000e+00 2067/2124 (97%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3600.2 0.000000e+00 2067/2126 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3591.0 0.000000e+00 2084/2153 (96%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3587.3 0.000000e+00 2050/2103 (97%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3579.9 0.000000e+00 2082/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3579.9 0.000000e+00 2082/2153 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3568.8 0.000000e+00 2078/2151 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3568.8 0.000000e+00 2080/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3568.8 0.000000e+00 2080/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3568.8 0.000000e+00 2080/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3568.8 0.000000e+00 2080/2153 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3568.8 0.000000e+00 2078/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3563.3 0.000000e+00 2078/2152 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3557.8 0.000000e+00 2077/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3552.2 0.000000e+00 2077/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI372287 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI823764 A/environment/Kamchatka/23/2016 (A/H13N8) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI704543 A/duck/Mongolia/742/2015 (A/H10N7) segment 3 (PA) 3546.7 0.000000e+00 2076/2153 (96%) EPI704421 A/duck/Mongolia/655/2015 (A/H2N3) segment 3 (PA) 3546.7 0.000000e+00 2076/2153 (96%) EPI296486 A/mallard/Netherlands/28/2006 (A/H3N1) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI704388 A/duck/Mongolia/482/2015 (A/H2N3) segment 3 (PA) 3541.1 0.000000e+00 2075/2153 (96%) EPI372351 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI222163 A/mallard/Altai/1208/2007 (A/H3N6) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI222094 A/garganey/Altai/1216/2007 (A/H3N6) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI613953 A/mallard/Sweden/101993/2009 (A/H2N9) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI598732 A/duck/Jiangxi/32180/2013 (A/H0) segment 3 (PA) 3530.1 0.000000e+00 2072/2152 (96%) EPI598348 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 3 (PA) 3530.1 0.000000e+00 2072/2152 (96%) EPI511172 A/mallard/Sweden/52299/2006 (A/H4N6) segment 3 (PA) 3530.1 0.000000e+00 2072/2152 (96%) EPI234643 A/duck/Beijing/40/04 (A/H3N8) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI232397 A/duck/Beijing/61/05 (A/H3N8) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI181966 A/mallard/Netherlands/2/2005 (A/H4N2) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%) EPI613943 A/mallard/Sweden/4932/2004 (A/H9N2) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI598766 A/duck/Jiangxi/5423/2014 (A/H0) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI598764 A/duck/Jiangxi/34864/2013 (A/H0) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI591116 A/duck/Jiangxi/5418/2014 (A/H0) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI372327 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI296254 A/wild duck/Korea/HDR02/2005 (A/H1N1) segment 3 (PA) 3519.0 0.000000e+00 2069/2151 (96%) EPI591120 A/duck/Jiangxi/5444/2014 (A/H7N3) segment 3 (PA) 3513.4 0.000000e+00 2069/2152 (96%)

Align Segment-ID Name Score E-Value Identity EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4145.0 0.000000e+00 2264/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4126.5 0.000000e+00 2260/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4126.5 0.000000e+00 2260/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2259/2274 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2257/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4060.1 0.000000e+00 2248/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3906.8 0.000000e+00 2221/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3879.1 0.000000e+00 2217/2275 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3868.0 0.000000e+00 2215/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3862.5 0.000000e+00 2214/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3862.5 0.000000e+00 2214/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3862.5 0.000000e+00 2214/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3845.8 0.000000e+00 2208/2271 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3840.3 0.000000e+00 2210/2275 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3840.3 0.000000e+00 2210/2275 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3840.3 0.000000e+00 2210/2275 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3829.2 0.000000e+00 2209/2276 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3823.7 0.000000e+00 2206/2274 (97%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3821.8 0.000000e+00 2194/2257 (97%) EPI617772 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 2 (PB1) 3818.1 0.000000e+00 2205/2274 (96%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3818.1 0.000000e+00 2206/2275 (96%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3812.6 0.000000e+00 2204/2274 (96%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3812.6 0.000000e+00 2205/2275 (96%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3812.6 0.000000e+00 2204/2274 (96%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3812.6 0.000000e+00 2204/2274 (96%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3807.1 0.000000e+00 2204/2275 (96%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3807.1 0.000000e+00 2203/2274 (96%) EPI602380 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 2 (PB1) 3807.1 0.000000e+00 2204/2275 (96%) EPI527629 A/common shelduck/Mongolia/2106/2011 (A/H3N8) segment 2 (PB1) 3807.1 0.000000e+00 2203/2274 (96%)

Align Segment-ID Name Score E-Value Identity EPI868845 A/turkey/England/052131/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4152.4 0.000000e+00 2269/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4152.4 0.000000e+00 2269/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4152.4 0.000000e+00 2269/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4152.4 0.000000e+00 2269/2280 (99%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4148.7 0.000000e+00 2268/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4121.0 0.000000e+00 2263/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3941.9 0.000000e+00 2231/2280 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3919.7 0.000000e+00 2227/2280 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3919.7 0.000000e+00 2227/2280 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3914.2 0.000000e+00 2226/2280 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3892.0 0.000000e+00 2222/2280 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3875.4 0.000000e+00 2219/2280 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3869.9 0.000000e+00 2218/2280 (97%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 3864.3 0.000000e+00 2217/2280 (97%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3842.2 0.000000e+00 2214/2281 (97%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 3842.2 0.000000e+00 2213/2280 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3836.6 0.000000e+00 2213/2281 (97%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 3836.6 0.000000e+00 2212/2280 (97%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 3831.1 0.000000e+00 2211/2280 (96%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 3831.1 0.000000e+00 2212/2281 (96%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 3831.1 0.000000e+00 2211/2280 (96%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 3814.5 0.000000e+00 2208/2280 (96%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3814.5 0.000000e+00 2209/2281 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3814.5 0.000000e+00 2209/2281 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3803.4 0.000000e+00 2206/2280 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3803.4 0.000000e+00 2206/2280 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3803.4 0.000000e+00 2207/2281 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3797.8 0.000000e+00 2205/2280 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3786.8 0.000000e+00 2204/2281 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3781.2 0.000000e+00 2203/2281 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3781.2 0.000000e+00 2203/2281 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3781.2 0.000000e+00 2203/2281 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3781.2 0.000000e+00 2204/2282 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3775.7 0.000000e+00 2201/2280 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3770.1 0.000000e+00 2200/2280 (96%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3770.1 0.000000e+00 2202/2282 (96%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3770.1 0.000000e+00 2201/2281 (96%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3770.1 0.000000e+00 2202/2282 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3764.6 0.000000e+00 2200/2281 (96%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3759.1 0.000000e+00 2199/2281 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3759.1 0.000000e+00 2200/2282 (96%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3759.1 0.000000e+00 2199/2281 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3759.1 0.000000e+00 2199/2281 (96%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3759.1 0.000000e+00 2199/2281 (96%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3759.1 0.000000e+00 2199/2281 (96%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3759.1 0.000000e+00 2199/2281 (96%) EPI600967 A/duck/Jiangxi/24570/2009 (A/H0) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI527565 A/ruddy shelduck/Mongolia/1189/2010 (A/H7N1) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%)

Align Segment-ID Name Score E-Value Identity EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1785.0 0.000000e+00 974/978 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1709.3 0.000000e+00 964/983 (98%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1694.5 0.000000e+00 961/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%)

Align Segment-ID Name Score E-Value Identity EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2544.0 0.000000e+00 1396/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1393/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1393/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1392/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1394/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1393/1407 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2514.4 0.000000e+00 1391/1406 (98%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2514.4 0.000000e+00 1391/1406 (98%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2492.3 0.000000e+00 1388/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1382/1407 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2447.9 0.000000e+00 1380/1407 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1376/1407 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1373/1408 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1370/1407 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1370/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1369/1407 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1370/1408 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2379.6 0.000000e+00 1349/1379 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1367/1407 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1368/1408 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1367/1407 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2370.4 0.000000e+00 1366/1407 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2364.8 0.000000e+00 1365/1407 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2348.2 0.000000e+00 1357/1399 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1352/1396 (96%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1350/1395 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1359/1408 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1357/1408 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1356/1407 (96%)

Align Segment-ID Name Score E-Value Identity EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1695/1705 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1693/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1690/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2987.2 0.000000e+00 1675/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2987.2 0.000000e+00 1675/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2976.1 0.000000e+00 1673/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2965.0 0.000000e+00 1671/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2953.9 0.000000e+00 1669/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1665/1705 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1665/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1600/1609 (99%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1663/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2905.9 0.000000e+00 1659/1702 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1661/1705 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1659/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1657/1705 (97%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1653/1704 (97%)

Isolate name: A/turkey/England/052131/2016 Isolate ID: EPI_ISL_239801 Passage details/history: Egg Passage 1 Type: A / H5N8 Lineage: Sample information Collection date: 2016-12-15 Host Turkey Additional host information: Domestic status: Domestic Is vaccinated: Location: United Kingdom / Lincolnshire Additional location information: Louth Health status: Specimen source: Oro-pharyngeal swab Strain or commercial product name used for vaccination: Institute information Originating lab: Animal and Plant Health Agency (APHA) Sample ID given by the sample provider: AVP-16-052131 Address: Animal and Plant Health Agency (APHA) Virology Department Woodham Lane New Haw, Addlestone, Surrey KT15 3NB United Kingdom Submitting lab: Animal and Plant Health Agency (APHA) Sample ID given by the submitting laboratory: AVP-16-052131 Authors: Seekings, James; Ellis, Richard; Brookes, Sharon M; Reid, Scott; Essen, Stephen; Brown, Ian H Address: Animal and Plant Health Agency (APHA) Virology Department Woodham Lane New Haw, Addlestone, Surrey KT15 3NB United Kingdom Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/turkey/England/052131/2016 2341 EPI868845 PB1 A/turkey/England/052131/2016 2341 EPI868846 PA A/turkey/England/052131/2016 2233 EPI868847 HA A/turkey/England/052131/2016 1776 EPI868848 NP A/turkey/England/052131/2016 1565 EPI868849 NA A/turkey/England/052131/2016 1460 EPI868850 MP A/turkey/England/052131/2016 1027 EPI868851 NS A/turkey/England/052131/2016 890 EPI868852 Submitter information Submitter: Seekings, James Submission Date: 2016-12-21 Last modifier: Seekings, James Last modified: 2016-12-21 Address: Animal and Plant Health Agency (APHA) Virology Department Woodham Lane New Haw, Addlestone, Surrey KT15 3NB United Kingdom

APHA has release full H5N8 sequence, A/turkey/England/052131/2016, (at GISAID) from Louth turkey farm.

Align Segment-ID Name Score E-Value Identity EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 4010.2 0.000000e+00 2171/2171 (100%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3943.7 0.000000e+00 2159/2171 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3938.2 0.000000e+00 2158/2171 (99%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3938.2 0.000000e+00 2158/2171 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3932.6 0.000000e+00 2157/2171 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3927.1 0.000000e+00 2156/2171 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3925.3 0.000000e+00 2155/2170 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3921.6 0.000000e+00 2155/2171 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3916.0 0.000000e+00 2154/2171 (99%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3916.0 0.000000e+00 2154/2171 (99%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3916.0 0.000000e+00 2154/2171 (99%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3916.0 0.000000e+00 2154/2171 (99%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3910.5 0.000000e+00 2153/2171 (99%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3910.5 0.000000e+00 2153/2171 (99%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3910.5 0.000000e+00 2153/2171 (99%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3910.5 0.000000e+00 2153/2171 (99%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3910.5 0.000000e+00 2153/2171 (99%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3908.6 0.000000e+00 2152/2170 (99%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3908.6 0.000000e+00 2152/2170 (99%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2130/2148 (99%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2130/2148 (99%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3860.6 0.000000e+00 2134/2156 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3827.4 0.000000e+00 2139/2172 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3799.7 0.000000e+00 2134/2172 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3794.1 0.000000e+00 2133/2172 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3788.6 0.000000e+00 2132/2172 (98%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3788.6 0.000000e+00 2132/2172 (98%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3783.1 0.000000e+00 2131/2172 (98%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3783.1 0.000000e+00 2131/2172 (98%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3783.1 0.000000e+00 2131/2172 (98%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3777.5 0.000000e+00 2130/2172 (98%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3772.0 0.000000e+00 2130/2173 (98%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3772.0 0.000000e+00 2129/2172 (98%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3760.9 0.000000e+00 2127/2172 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3755.4 0.000000e+00 2126/2172 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3733.2 0.000000e+00 2122/2172 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3722.1 0.000000e+00 2120/2172 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3714.7 0.000000e+00 2119/2172 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3688.9 0.000000e+00 2114/2172 (97%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3666.7 0.000000e+00 2109/2171 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3650.1 0.000000e+00 2106/2171 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3624.2 0.000000e+00 2086/2148 (97%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3618.7 0.000000e+00 2086/2149 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2084/2149 (96%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3605.8 0.000000e+00 2098/2171 (96%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3594.7 0.000000e+00 2097/2172 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3589.2 0.000000e+00 2095/2171 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3572.5 0.000000e+00 2092/2171 (96%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3572.5 0.000000e+00 2092/2171 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3567.0 0.000000e+00 2091/2171 (96%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3567.0 0.000000e+00 2091/2171 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3563.3 0.000000e+00 2086/2164 (96%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3561.5 0.000000e+00 2090/2171 (96%) EPI118337 A/duck/Jiang Xi/3345/2005 (A/H5N2) segment 3 (PA) 3561.5 0.000000e+00 2090/2171 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3557.8 0.000000e+00 2074/2148 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3557.8 0.000000e+00 2074/2148 (96%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3557.8 0.000000e+00 2084/2163 (96%) EPI244544 A/mallard/Korea/GH171/2007 (A/H7N7) segment 3 (PA) 3555.9 0.000000e+00 2089/2171 (96%) EPI244507 A/magpie/Korea/YJD174/2007 (A/H7N7) segment 3 (PA) 3555.9 0.000000e+00 2089/2171 (96%) EPI244497 A/mallard/Korea/GH170/2007 (A/H7N7) segment 3 (PA) 3555.9 0.000000e+00 2089/2171 (96%) EPI131894 A/sharp-tailed sandpiper/Australia/10/2004 (A/H11N9) segment 3 (PA) 3555.9 0.000000e+00 2090/2172 (96%) EPI69246 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 3 (PA) 3555.9 0.000000e+00 2090/2172 (96%) EPI774513 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 3 (PA) 3550.4 0.000000e+00 2090/2173 (96%) EPI533885 A/duck/Guangxi/125D17/2012 (A/H4N2) segment 3 (PA) 3550.4 0.000000e+00 2088/2171 (96%) EPI401299 A/wild duck/Korea/CSM20-5/2009 (A/H4N6) segment 3 (PA) 3550.4 0.000000e+00 2088/2171 (96%) EPI118321 A/duck/Jiang Xi/1850/2005 (A/H5N2) segment 3 (PA) 3550.4 0.000000e+00 2088/2171 (96%)

Isolate name: A/mute swan/Croatia/70/2016 Isolate ID: EPI_ISL_238196 Passage details/history: 0 Type: A / H5N8 Lineage: Sample information Collection date: 2016-10-30 Host Cygnus olor Additional host information: Domestic status: Wild Is vaccinated: Location: Croatia / Vukovarsko-Srijemska Zupanija Additional location information: Cerna, river Bid Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Croatian Veterinary Institute Sample ID given by the submitting laboratory: Authors: Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/mute swan/Croatia/70/2016 2143 EPI867457 PA A/mute swan/Croatia/70/2016 2171 EPI867456 HA A/mute swan/Croatia/70/2016 1729 EPI861568 NP A/mute swan/Croatia/70/2016 1524 EPI865159 NA A/mute swan/Croatia/70/2016 1425 EPI861569 MP A/mute swan/Croatia/70/2016 983 EPI861570 NS A/mute swan/Croatia/70/2016 838 EPI861571 Submitter information Submitter: Savić, Vladimir Submission Date: 2016-11-24 Last modifier: Savić, Vladimir Last modified: 2016-12-18 Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1aNOepBDPUd0zdRnQE1UbSW8djsk&ll=11.380400140082145%2C8.33907661962894&z=9

Date of start of the event 19/11/2016 Outbreak Status Resolved Date of resolution of the outbreak 17/12/2016 State KANO Local Government Kumbotso District Epidemiological Unit Type Not applicable Location Danbare Latitude 11.57267 Longitude 8.261829 Description of Affected Population Mix birds species in free range: guinea fowls, turkeys and pigeons. Affected animals Species At risk Cases Deaths Destroyed Birds 250 15 15 235 Total Animals 250 15 15 235

Highly pathogenic avian influenza, Nigeria Information received on 17/12/2016 from Dr Gideon Mbursa Mshelbwala, Director, Veterinary Services, Federal Ministry of Agriculture and Rural Development, ABUJA, Nigeria Summary Report type Immediate notification Date of start of the event 19/11/2016 Date of confirmation of the event 16/12/2016 Report date 17/12/2016 Date submitted to OIE 17/12/2016 Reason for notification New strain of a listed disease in the country Causal agent Highly pathogenic avian influenza virus Serotype H5N8 Nature of diagnosis Laboratory (advanced) This event pertains to a defined zone within the country New outbreaks (1) Outbreak 1 Danbare, Kumbotso, KANO Date of start of the outbreak 19/11/2016 Outbreak status Resolved (17/12/2016) Epidemiological unit Not applicable Affected animals Species Susceptible Cases Deaths Destroyed Slaughtered Birds 250 15 15 235 0 Affected population Mix birds species in free range: guinea fowls, turkeys and pigeons. Summary of outbreaks Total outbreaks: 1 Total animals affected Species Susceptible Cases Deaths Destroyed Slaughtered Birds 250 15 15 235 0 Outbreak statistics Species Apparent morbidity rate Apparent mortality rate Apparent case fatality rate Proportion susceptible animals lost* Birds 6.00% 6.00% 100.00% 100.00% *Removed from the susceptible population through death, destruction and/or slaughter Epidemiology Source of the outbreak(s) or origin of infection Introduction of new live animals Epidemiological comments The owner purchased birds from a local market. Control measures Measures applied Disinfection / Disinfestation Quarantine Stamping out Official destruction of animal products Official disposal of carcasses, by-products and waste Vaccination prohibited No treatment of affected animals Measures to be applied No other measures Diagnostic test results Laboratory name and type Species Test Test date Result National Veterinary Research Institute (Regional Reference Laboratory) Birds real-time PCR 16/12/2016 Positive Future Reporting The event is continuing. Weekly follow-up reports will be submitted. Map of outbreak locations

Outbreak 1 Danbare, Kumbotso, KANO Date of start of the outbreak 19/11/2016 Outbreak status Resolved (17/12/2016) Epidemiological unit Not applicable Affected animals Species Susceptible Cases Deaths Destroyed Slaughtered Birds 250 15 15 235 0 Affected population Mix birds species in free range: guinea fowls, turkeys and pigeons. http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21972

Align Segment-ID Name Score E-Value Identity EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 978/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1773.9 0.000000e+00 972/978 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 968/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1683.4 0.000000e+00 959/983 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%)

Align Segment-ID Name Score E-Value Identity EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2588.3 0.000000e+00 1404/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1392/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1392/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1391/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1394/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1393/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2514.4 0.000000e+00 1392/1407 (98%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2508.9 0.000000e+00 1390/1406 (98%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2508.9 0.000000e+00 1390/1406 (98%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2486.7 0.000000e+00 1387/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1382/1407 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2442.4 0.000000e+00 1379/1407 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1375/1407 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1370/1407 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1370/1407 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1371/1408 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1369/1407 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1367/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1367/1407 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1368/1408 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2374.1 0.000000e+00 1348/1379 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2370.4 0.000000e+00 1366/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2364.8 0.000000e+00 1365/1407 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2364.8 0.000000e+00 1366/1408 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2359.3 0.000000e+00 1365/1408 (96%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1355/1399 (96%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1350/1396 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1350/1396 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1357/1408 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1355/1407 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1354/1407 (96%)

Align Segment-ID Name Score E-Value Identity EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1690/1705 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1687/1705 (98%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1687/1705 (98%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1685/1705 (98%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2950.2 0.000000e+00 1605/1609 (99%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1661/1705 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1661/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2894.8 0.000000e+00 1657/1702 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1659/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1657/1705 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1655/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1653/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2859.7 0.000000e+00 1652/1704 (96%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2859.7 0.000000e+00 1653/1705 (96%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2826.5 0.000000e+00 1647/1705 (96%)

Isolate name: A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 Isolate ID: EPI_ISL_238897 Passage details/history: Clinical Sample Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-14 Host Bucephala clangula Additional host information: http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21653 Domestic status: Wild Is vaccinated: N Location: Sweden / Skane Lan / Vellinge Kommun Additional location information: Vellinge, Höllviken Health status: Sick Specimen source: Oro-pharyngeal swab Strain or commercial product name used for vaccination: Institute information Originating lab: National Veterinary Institute Sample ID given by the sample provider: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Submitting lab: National Veterinary Institute Sample ID given by the submitting laboratory: Authors: Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 2280 EPI863862 PB1 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 2297 EPI863863 PA A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 2190 EPI863864 HA A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 1704 EPI863865 NP A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 1463 EPI863866 NA A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 1413 EPI863867 MP A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 982 EPI863868 NS A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 835 EPI863869 Submitter information Submitter: Zohari, Siamak Submission Date: 2016-11-29 Last modifier: Zohari, Siamak Last modified: 2016-11-29 Address: National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden