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niman

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  1. niman
    H5N5 map update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1sCuerlmBTcpi1QLzYCES_Nkv-nw&ll=41.38578491315892%2C8.34514571274417&z=4
  2. niman
    Highly pathogenic avian influenza, Montenegro Information received on 22/12/2016 from Dr Vesna Dakovic, Acting Director, Administration for Food Safety, Veterinary and Phitosanitary Affairs, Ministry of Agriculture and Rural Development, PODGORICA, Montenegro Summary Report type Immediate notification Date of start of the event 12/12/2016 Date of confirmation of the event 19/12/2016 Report date 22/12/2016 Date submitted to OIE 22/12/2016 Reason for notification First occurrence of a listed disease in the country Causal agent Highly pathogenic avian influenza virus Serotype H5N5 Nature of diagnosis Laboratory (advanced) This event pertains to a defined zone within the country New outbreaks (1) Outbreak 1 Plavnica, PODGORICA Date of start of the outbreak 12/12/2016 Outbreak status Continuing (or date resolved not provided) Epidemiological unit Natural park Affected animals Species Susceptible Cases Deaths Destroyed Slaughtered Common Teal:Anas crecca(Anatidae) 1 0 1 0 Summary of outbreaks Total outbreaks: 1 Total animals affected Species Susceptible Cases Deaths Destroyed Slaughtered Common Teal:Anas crecca(Anatidae) 1 0 1 0 Outbreak statistics Species Apparent morbidity rate Apparent mortality rate Apparent case fatality rate Proportion susceptible animals lost* Common Teal:Anas crecca(Anatidae) ** ** 0.00% ** *Removed from the susceptible population through death, destruction and/or slaughter **Not calculated because of missing information Epidemiology Source of the outbreak(s) or origin of infection Unknown or inconclusive Epidemiological comments The case was discovered within the program of active monitoring of wild birds, without clinical signs. Control measures Measures applied Surveillance within containment and/or protection zone Control of wildlife reservoirs Zoning Vaccination prohibited No treatment of affected animals Measures to be applied No other measures Diagnostic test results Laboratory name and type Species Test Test date Result Diagnostic Veterinary Laboratory in Podgorica (National laboratory) Common Teal real-time reverse transcriptase/polymerase chain reaction (RRT-PCR) 19/12/2016 Positive Future Reporting The event is continuing. Weekly follow-up reports will be submitted. Map of outbreak locations http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=22031
  3. niman
  4. niman
    PODGORICA- (this report - submitted) - Natural park Plavnica 42.260398 19.251823 12/12/2016 Species Measuring units Susceptible Cases Deaths Destroyed Slaughtered Common Teal:Anatidae(Anas crecca) Animals ... 1 0 1 0 Affected Population Outbreak summary: Total outbreaks = 1 (Submitted) Species Susceptible Cases Deaths Destroyed Slaughtered Common Teal 1 0 1 0 Epidemiology Epidemiological comments The case was discovered within the program of active monitoring of wild birds, without clinical signs. http://www.oie.int/wahis_2/temp/reports/en_imm_0000022031_20161223_120753.pdf
  5. niman
    UW Identifies Flu Strain Affecting NYC Shelter Cars as H7N2 Influenza December 16, 2016 MADISON – The Wisconsin Veterinary Diagnostic Laboratory at the University of Wisconsin-Madison has identified the influenza A strain involved in an outbreak among cats in a New York City animal shelter as low pathogenic avian influenza H7N2, a rare subtype that has not been found previously in domestic felines. The Shelter Medicine Program at the UW School of Veterinary Medicine is working closely with New York City’s Manhattan Animal Care Center (ACC-Manhattan) and the New York City Health Department to manage the situation, which includes establishing a quarantine facility while the Manhattan center is disinfected. Cats that have contracted the H7N2 strain in the shelter have displayed upper respiratory symptoms such as runny nose, congestion, persistent cough and lip smacking, but the illness has not been severe. One cat was euthanized after developing pneumonia. No other species of animals from the shelter, including dogs, have tested positive for the virus. While we are concerned about this new infection, the cats are experiencing only mild to moderate illness…” Sandra Newbury “While we are concerned about this new infection, the cats are experiencing only mild to moderate illness, but a few have developed pneumonia,” says Sandra Newbury, clinical assistant professor at the veterinary school and director of the UW Shelter Medicine Program. “Many of the cats who were initially ill are already recovering. We do want people to be aware of what is happening, but influenza infection is unlikely in cats that have not had contact with cats from New York City’s Manhattan Animal Care Center.” The first cases of influenza at the shelter were reported in late November when a private company, IDEXX Reference Laboratories, tested sick cats housed at ACC-Manhattan. The shelter then approached the UW Shelter Medicine Program and WVDL for more assistance since both helped manage outbreaks of a different strain of influenza that affected dogs and cats in the Midwest earlier this year and in 2015. Further testing at WVDL found additional positive samples and led to identification of the H7N2 strain, a finding that has been verified by the U.S. Department of Agriculture’s National Veterinary Services Laboratories. The California Animal Health and Food Safety Laboratory at the University of California, Davis also confirmed the presence of H7N2 influenza virus after IDEXX provided samples to that lab for testing. “This is the first time H7N2 has been detected and transmitted among domestic cats,” says Kathy Toohey-Kurth, clinical professor and head of the WVDL’s virology section. This is the first time H7N2 has been detected and transmitted among domestic cats.” Kathy Toohey-Kurth Several cases of H7N2 were found in commercial poultry in the United States between 2000 and 2006, and it may be able to spread to other animals. There have been only two cases of H7N2 found in humans, and both cases ended with full recovery. The virus is thought to pose low risk to people. No human infections related to this case have been identified to date. While influenza infection is unlikely in cats that have not had contact with infected felines from the shelter, owners whose animals show signs of influenza should contact their veterinarian for instructions. Cats suspected to be infected with the virus should be housed separately from other animals and precautions should be taken to prevent spread of the virus on hands and clothing. “We’ll continue to work with the shelter to help manage the case and offer testing to any cats in rescue groups that are affected,” says Newbury. “We are hoping that offering this kind of diagnostic support will help rescue groups identify if they have cats with the virus so they can isolate them in order to stop the spread.” Diagnostic testing conducted by the WVDL for animals that have come from the New York City shelter since Nov. 12 will be paid for by a generous gift from Maddie’s Fund, a family foundation that seeks to “revolutionize the status and well-being of companion animals.” Shelters and rescue groups may contact the UW Shelter Medicine Program at [email protected] with testing inquiries or questions regarding influenza in cats and dogs, and can look for updates at www.uwsheltermedicine.com. More details about the program’s partnership to provide diagnostic testing for shelters can be found on its diagnostic testing webpage. Nik Hawkins CONTACT: Sandra Newbury, 608-335-2122, [email protected] https://www.vetmed.wisc.edu/uw-identifies-h7n2-influenza-in-nyc-shelter-cats/
  6. niman
    Align Segment-ID Name Score E-Value Identity EPI869667 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI838201 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI833718 A/Fujian/3/2016 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI740732 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI681183 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI681178 A/chicken/Zhejiang/727198/2014 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI838243 A/Hunan/44557/2015 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI681175 A/chicken/Zhejiang/77082/2014 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI680520 A/Hunan/44558/2015 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI628826 A/Zhejiang/9/2015 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI628794 A/Fujian/28/2015 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI681035 A/chicken/Zhejiang/3C7/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI627171 A/Zhejiang/5/2015 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764645 A/chicken/Shaoxing/5195/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI764626 A/chicken/Shaoxing/5201/2013 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI683116 A/duck/Wenzhou/YJYF24/2015 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681026 A/chicken/Zhejiang/C47/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681025 A/chicken/Zhejiang/C46/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681024 A/chicken/Zhejiang/C45/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681023 A/chicken/Zhejiang/C38/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681022 A/chicken/Zhejiang/C31/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI681019 A/chicken/Zhejiang/C3/2013 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI654468 A/GD-MZ_79/H9N2/2015-02-10 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 828/836 (99%) EPI596679 A/chicken/Wenzhou/2619/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI583406 A/chicken/Shenzhen/967/2013 (A/H0) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI576627 A/environment/Shanghai/PD-JZ-01/2014 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI764650 A/chicken/Shaoxing/5453/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI683105 A/chicken/Wenzhou/YHQL04/2014 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI681181 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI681179 A/chicken/Zhejiang/925018/2014 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI681040 A/chicken/Zhejiang/4C105/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI681028 A/chicken/Zhejiang/C52/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI680997 A/quail/Zhejiang/2A5/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI627123 A/Zhejiang/36/2014 (A/H7N9) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI594364 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI466476 A/chicken/Jiangsu/HA2/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI764649 A/chicken/Jiaxing/4640/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI764642 A/chicken/Rizhao/3052/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI764619 A/chicken/Jiaxing/4490/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI764537 A/chicken/Huzhou/4034/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI691661 A/chicken/Henan/141/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI691660 A/chicken/Henan/117/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI691659 A/chicken/Henan/114/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI681036 A/chicken/Zhejiang/3C19/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI681021 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI681017 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI681003 A/pigeon/Zhejiang/2P5/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI681002 A/pigeon/Zhejiang/2P4/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI663522 A/pigeon/Wuxi/0405007/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI663499 A/duck/Sunan/040802/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI663498 A/duck/Wuxi/04030204/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636948 A/Anhui/1-YK_RG39/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636941 A/Anhui/1-YK_RG38/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636934 A/Anhui/1-YK_RG37/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636918 A/Anhui/1-YK_RG35/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636911 A/Anhui/1-YK_RG34/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636881 A/Anhui/1-YK_RG30/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636874 A/Anhui/1-YK_RG29/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636867 A/Anhui/1-YK_RG28/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636860 A/Anhui/1-YK_RG27/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636853 A/Anhui/1-YK_RG26/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636844 A/Anhui/1-YK_RG25/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636837 A/Anhui/1-YK_RG24/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636830 A/Anhui/1-YK_RG23/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636823 A/Anhui/1-YK_RG22/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636816 A/Anhui/1-YK_RG21/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636809 A/Anhui/1-YK_RG20/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636798 A/Anhui/1-YK_RG19/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636791 A/Anhui/1-YK_RG18/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636784 A/Anhui/1-YK_RG17/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636777 A/Anhui/1-YK_RG16/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636770 A/Anhui/1-YK_RG15/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636763 A/Anhui/1-YK_RG14/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636756 A/Anhui/1-YK_RG13/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636749 A/Anhui/1-YK_RG12/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636742 A/Anhui/1-YK_RG10/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636734 A/Anhui/1-YK_RG09/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636726 A/Anhui/1-YK_RG08/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636719 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636712 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636705 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636698 A/Anhui/1-YK_RG04/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636691 A/Anhui/1-YK_RG03/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636684 A/Anhui/1-YK_RG02/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI636677 A/Anhui/1-YK_RG01/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI627603 A/Environment/Guangdong-Guangzhou/XN01070/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620203 A/Anhui/1-BALF_RG6/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620196 A/Anhui/1-JCVI1_RG3/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620189 A/Anhui/1-JCVI1_RG2/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620182 A/Anhui/1-JCVI1_RG1/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620171 A/Anhui/1-BALF_RG9/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620164 A/Anhui/1-BALF_RG8/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620157 A/Anhui/1-BALF_RG7/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620146 A/Anhui/1-BALF_RG20/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620139 A/Anhui/1-BALF_RG19/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620132 A/Anhui/1-BALF_RG18/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620125 A/Anhui/1-BALF_RG17/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620122 A/Anhui/1-BALF_RG32/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620115 A/Anhui/1-BALF_RG31/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI620108 A/Anhui/1-BALF_RG29/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
  7. niman
    Align Segment-ID Name Score E-Value Identity EPI869666 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI627050 A/Guangdong/15SF051/2015 (A/H7N9) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%) EPI656435 A/GD-68/2015/H7N9/2015-02-08 (A/H7N9) segment 5 (NP) 2632.6 0.000000e+00 1471/1494 (98%) EPI656395 A/GD-51/2015/H7N9/2015-01-30 (A/H7N9) segment 5 (NP) 2632.6 0.000000e+00 1471/1494 (98%) EPI654424 A/Environment/GD-GZ_707/H9N2/2014-8 (A/H9N2) segment 5 (NP) 2632.6 0.000000e+00 1471/1494 (98%) EPI583271 A/Shenzhen/SP44/2014 (A/H7N9) segment 5 (NP) 2628.9 0.000000e+00 1472/1497 (98%) EPI654196 A/Environment/GD-GZ_112/H9N2/2014 (A/H9N2) segment 5 (NP) 2627.1 0.000000e+00 1470/1494 (98%) EPI581577 A/silkie chicken/Shenzhen/2134/2013 (A/H7N9) segment 5 (NP) 2627.1 0.000000e+00 1472/1497 (98%) EPI490875 A/Hong Kong/5942/2013 (A/H7N9) segment 5 (NP) 2621.5 0.000000e+00 1471/1497 (98%) EPI838080 A/chicken/Guangdong/SIC14/2013 (A/H9N2) segment 5 (NP) 2616.0 0.000000e+00 1470/1497 (98%) EPI654247 A/Environment/GD-GZ_874/H9N2/2014-11 (A/H9N2) segment 5 (NP) 2616.0 0.000000e+00 1469/1495 (98%) EPI509508 A/Hong Kong/470129/2013 (A/H7N9) segment 5 (NP) 2616.0 0.000000e+00 1470/1497 (98%) EPI583664 A/chicken/Dongguan/3550/2013 (A/H9N2) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI583425 A/chicken/Shenzhen/1098/2013 (A/H9N2) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI581583 A/silkie chicken/Shenzhen/2139/2013 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI578240 A/silkie chicken/Dongguan/523/2014 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI577968 A/chicken/Shenzhen/2131/2013 (A/H0) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI577960 A/chicken/Shenzhen/2110/2013 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI583706 A/silkie chicken/Dongguan/4184/2013 (A/H9N2) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI838116 A/chicken/Guangdong/SIC23/2014 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI654299 A/Environment/GD-ZQ_499/H9N2/2014-12 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1465/1494 (98%) EPI654163 A/Environment/GD-YJ_25005/H9N2/2013 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1465/1494 (98%) EPI583726 A/chicken/Dongguan/4254/2013 (A/H0) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI583622 A/chicken/Dongguan/3056/2013 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI583594 A/chicken/Dongguan/2827/2013 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI583559 A/chicken/Shenzhen/2477/2013 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI583552 A/chicken/Shenzhen/2403/2013 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI583545 A/chicken/Dongguan/2309/2013 (A/H9N2) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI838097 A/chicken/Guangdong/SIC1/2012 (A/H9N2) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI583678 A/chicken/Shenzhen/3745/2013 (A/H9N2) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI583447 A/chicken/Shenzhen/1377/2013 (A/H9N2) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI583671 A/chicken/Dongguan/3562/2013 (A/H9N2) segment 5 (NP) 2586.4 0.000000e+00 1463/1495 (97%) EPI838079 A/chicken/Guangdong/SIC31/2014 (A/H9N2) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI583608 A/chicken/Dongguan/2900/2013 (A/H9N2) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI628529 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI583734 A/chicken/Dongguan/3250/2013 (A/H9N2) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI583643 A/chicken/Dongguan/3315/2013 (A/H9N2) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI654190 A/Environment/GD-HY_81/H9N2/2013-7 (A/H9N2) segment 5 (NP) 2544.0 0.000000e+00 1455/1494 (97%) EPI583880 A/chicken/Shenzhen/1664/2013 (A/H9N2) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI583573 A/chicken/Shenzhen/2636/2013 (A/H9N2) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI490988 A/environment/Guangdong/GD130184/2013 (A/H9N2) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI470507 A/chicken/Hong Kong/CRA45W/2010 (A/H9N2) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI470496 A/chicken/Hong Kong/FY64W/2010 (A/H9N2) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI654229 A/Environment/GD-MM_252/H9N2/2014-10 (A/H9N2) segment 5 (NP) 2538.4 0.000000e+00 1454/1494 (97%) EPI602047 A/chicken/Dongguan/2818/2013 (A/H0) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI583333 A/chicken/Shenzhen/354/2013 (A/H9N2) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI470510 A/chicken/Hong Kong/YO28/2011 (A/H9N2) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI470506 A/chicken/Hong Kong/CRA45/2010 (A/H9N2) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI491004 A/environment/Guangdong/GD130210/2013 (A/H9N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI470523 A/chicken/Hong Kong/YO173W/2011 (A/H9N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI470522 A/silkie chicken/Hong Kong/YU595W/2011 (A/H9N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI490996 A/environment/Guangdong/GD130206/2013 (A/H9N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI538913 A/chicken/Guangxi/LS/2013 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI470531 A/chicken/Hong Kong/YO12W/2012 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI470509 A/chicken/Hong Kong/TC18/2011 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI691954 A/chicken/Hainan/I22/2011 (A/H9N2) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI691654 A/chicken/Guangdong/34/2011 (A/H9N2) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI470511 A/chicken/Hong Kong/YU158/2011 (A/H9N2) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI457476 A/chicken/Vietnam/NCVD-1156/2011 (A/H9N2) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%) EPI470534 A/chicken/Hong Kong/YU150W/2012 (A/H9N2) segment 5 (NP) 2512.6 0.000000e+00 1451/1497 (96%) EPI838095 A/chicken/Fujian/SIC9/2013 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI838088 A/chicken/Guangdong/SIC10/2013 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI691956 A/chicken/Henan/90/2012 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI654315 A/Environment/GD-MZ_308/H9N2/2014-4 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1449/1494 (96%) EPI470528 A/chicken/Hong Kong/YO6/2012 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI470527 A/chicken/Hong Kong/FY6W/2012 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI470512 A/chicken/Hong Kong/JV75/2011 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI470533 A/chicken/Hong Kong/YU148/2012 (A/H9N2) segment 5 (NP) 2507.0 0.000000e+00 1450/1497 (96%) EPI470529 A/chicken/Hong Kong/WF3/2012 (A/H9N2) segment 5 (NP) 2507.0 0.000000e+00 1450/1497 (96%) EPI341709 A/chicken/Guangdong/ZHJ/2011 (A/H9N2) segment 5 (NP) 2507.0 0.000000e+00 1449/1495 (96%) EPI691999 A/quail/Jiangsu/S18/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI691998 A/quail/Jiangsu/S16/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI691997 A/quail/Jiangsu/S15/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI691996 A/quail/Jiangsu/S12/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI691949 A/chicken/Anhui/63/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI691658 A/chicken/Yunnan/361/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI572850 A/chicken/Jilin/0519/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI470530 A/chicken/Hong Kong/WF1W/2012 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI470520 A/chicken/Hong Kong/CSW445W/2011 (A/H9N2) segment 5 (NP) 2501.5 0.000000e+00 1448/1495 (96%) EPI342586 A/chicken/Zhejiang/Q1D4/2010 (A/H9N2) segment 5 (NP) 2501.5 0.000000e+00 1448/1495 (96%) EPI691994 A/quail/Hainan/250/2012 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI691970 A/pigeon/Guizhou/147/2012 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI672869 A/chicken/Shandong/Li-2/2010 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI628433 A/environment/Guangdong/02621/2013 (A/H7N9) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI470537 A/chicken/Hong Kong/YU344/2012 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI470497 A/chicken/Hong Kong/HH8/2010 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI691993 A/pigeon/Yunnan/1191/2013 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI691971 A/pigeon/Guizhou/150/2012 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1449/1498 (96%) EPI691953 A/chicken/Guizhou/299/2012 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI691937 A/chicken/Henan/114/2013 (A/H7N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI656499 A/GD-120/2015/H7N9/2015-03-10 (A/H7N9) segment 5 (NP) 2494.1 0.000000e+00 1447/1495 (96%) EPI654393 A/Environment/GD-MM_191/H9N2/2014-7 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1496 (96%) EPI569698 A/chicken/Jiangsu/07/2009 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI470538 A/chicken/Hong Kong/FY105W/2012 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI838083 A/chicken/Hubei/SIC7/2013 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI691967 A/pigeon/Guizhou/111/2012 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI560122 A/chicken/Anhui/1/2008 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI470541 A/chicken/Hong Kong/JV231W/2012 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI470539 A/chicken/Hong Kong/YO117W/2012 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI470536 A/chicken/Hong Kong/YU262W/2012 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%)
  8. niman
    Align Segment-ID Name Score E-Value Identity EPI869669 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI693856 A/Shenzhen/TH003/2016(H5N6) (A/H5N6) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI628748 A/Anhui/33225/2015 (A/H7N9) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI627013 A/Jiangsu/18828/2014 (A/H7N9) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI628700 A/Environment/Hunan/07626/2015 (A/H7N9) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI838067 A/chicken/Shandong/SIC34/2014 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2116/2152 (98%) EPI628716 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI692495 A/duck/Hubei/S2227/2012 (A/H4N2) segment 3 (PA) 3768.3 0.000000e+00 2115/2152 (98%) EPI529225 A/chicken/Shanghai/C/2011 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI466406 A/chicken/Jiangsu/MYJMF/2012 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI691871 A/chicken/Anhui/w107/2011 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2106/2143 (98%) EPI497525 A/environment/Jiangxi/00452/2013 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI515821 A/Chicken/Suzhou/097-2/2013 (A/H9N2) segment 3 (PA) 3749.8 0.000000e+00 2109/2148 (98%) EPI661507 A/environment/Guangdong/04.23 DGQTXC055/2015(Mixed) (A/H5N6) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%) EPI627189 A/Guangdong/15SF020/2015 (A/H7N9) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%) EPI572890 A/chicken/Shaanxi/xa0414/2013 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI466382 A/chicken/Jiangsu/CZYWP/2012 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI691877 A/chicken/Henan/322/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI627069 A/Guangdong/15SF050/2015 (A/H7N9) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI594046 A/chicken/Jiangsu/XZ0616/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI572896 A/chicken/Hebei/1024/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI572883 A/chicken/Shandong/qd0427/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI568776 A/chicken/Shandong/qd1115/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI466270 A/chicken/Jiangsu/WJHRG/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2111/2153 (98%) EPI457673 A/environment/Shanghai/S1436/2013 (A/H7N9) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI661915 A/chicken/Guangdong/04.15 SZBAXQ019/2015(H5N6) (A/H5N6) segment 3 (PA) 3735.0 0.000000e+00 2108/2151 (98%) EPI661427 A/chicken/Guangdong/04.16 LGWL013/2015(Mixed) (A/H5N6) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI580386 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 3 (PA) 3735.0 0.000000e+00 2108/2151 (98%) EPI572876 A/chicken/Shandong/qd1224/2012 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI568778 A/chicken/Shandong/qd0107/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI568777 A/chicken/Shandong/qd0307/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI497541 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI838040 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI680745 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI680744 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI580370 A/Chicken/Guangdong/CZ145/2015 (A/H7N9) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI577337 A/chicken/Wenzhou/3330/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI572898 A/chicken/Hebei/0109/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI532335 A/chicken/Zhejiang/C497/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI497532 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI466294 A/chicken/Jiangsu/XZMG/2012 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI729792 A/chicken/Shanghai/02/2015 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2110/2155 (97%) EPI691923 A/pigeon/Shanxi/87/2012 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2101/2143 (98%) EPI680743 A/chicken/Zhejiang/C493/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI594023 A/chicken/Shandong/0613/2012 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI580378 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI557657 A/duck/Zhejiang/D485/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI532334 A/chicken/Zhejiang/C494/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI532292 A/pigeon/Zhejiang/P1/2013 (A/H7N9) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI497847 A/environment/Zhenjiang/4/2013 (A/H7N9) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI497499 A/environment/Chongqing/00516/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI466454 A/chicken/Jiangsu/ZJ4/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI450830 A/quail/Hangzhou/35/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI691903 A/pigeon/Hubei/269/2012 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2102/2146 (97%) EPI691901 A/pigeon/Hubei/228/2012 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2098/2140 (98%) EPI594071 A/chicken/Jiangsu/WJ58/2012 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2108/2154 (97%) EPI572885 A/chicken/Shandong/qd0225/2013 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI572871 A/chicken/Shandong/wf1206/2012 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI497516 A/environment/Jiangxi/00449/2013 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI487840 A/chicken/Wenzhou/614/2013 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2107/2153 (97%) EPI487828 A/chicken/Wenzhou/666/2013 (A/H7N7) segment 3 (PA) 3718.4 0.000000e+00 2107/2153 (97%) EPI468351 A/chicken/Hangzhou/48-2/2013(H9N2) (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI466492 A/chicken/Jiangsu/CZ1/2012 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI466342 A/chicken/Jiangsu/XZWHL/2012 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI443658 A/chicken/Hangzhou/48-1/2013(H7N9) (A/H7N9) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI487839 A/chicken/Wenzhou/606/2013 (A/H9N2) segment 3 (PA) 3714.7 0.000000e+00 2106/2153 (97%) EPI680742 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI680740 A/chicken/Zhejiang/C485/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI680736 A/pigeon/Zhejiang/P5/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI680735 A/pigeon/Zhejiang/P4/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI680734 A/pigeon/Zhejiang/P3/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI680724 A/quail/Zhejiang/A2/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI680723 A/quail/Zhejiang/A1/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI598801 A/chicken/Jiangxi/6741/2013 (A/H0) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI572893 A/chicken/Liaoning/0517/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI532333 A/chicken/Zhejiang/C487/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI492300 A/environment/Zhejiang/14/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI466470 A/chicken/Jiangsu/NTTZ/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI466462 A/duck/Jiangsu/YC2/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI466446 A/chicken/Jiangsu/CZJT2/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI760825 A/chicken/Guangdong/10.16 SZLGKQHY-072/2015 (A/H5N6) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI691883 A/chicken/Jiangsu/JS86/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2098/2143 (97%) EPI691881 A/chicken/Jiangsu/331/2012 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2096/2140 (97%) EPI654367 A/Environment/GD-QY_201/H9N2/2014-5 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2079/2115 (98%) EPI572872 A/chicken/Shandong/wf12010/2012 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI568779 A/chicken/Beijing/16/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI532347 A/chicken/Zhejiang/C11/2013 (A/H9N9) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI492303 A/environment/Zhejiang/15/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI487858 A/chicken/Rizhao/1436/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2105/2153 (97%) EPI487857 A/chicken/Rizhao/1363/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2105/2153 (97%) EPI487854 A/chicken/Rizhao/853/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2105/2153 (97%) EPI487853 A/chicken/Rizhao/811/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2105/2153 (97%) EPI466478 A/chicken/Jiangsu/HA2/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI457428 A/Shandong/0068A/2013 (A/H7N9) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI447719 A/Shandong/01/2013 (A/H7N9) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI838050 A/chicken/Guangxi/SIC15/2013 (A/H9N2) segment 3 (PA) 3701.8 0.000000e+00 2103/2152 (97%) EPI691900 A/pigeon/Hubei/227/2012 (A/H9N2) segment 3 (PA) 3701.8 0.000000e+00 2097/2143 (97%) EPI654149 A/Environment/GD-ZS_162/H7N9/2014-5 (A/H7N9) segment 3 (PA) 3701.8 0.000000e+00 2078/2115 (98%) EPI577063 A/chicken/Shenzhen/1047/2013 (A/H9N2) segment 3 (PA) 3701.8 0.000000e+00 2103/2152 (97%) EPI572873 A/chicken/Shandong/wf0712/2013 (A/H9N2) segment 3 (PA) 3701.8 0.000000e+00 2103/2152 (97%)
  9. niman
    Align Segment-ID Name Score E-Value Identity EPI869671 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI597583 A/chicken/Dongguan/1421/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI597445 A/chicken/Dongguan/1022/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI597159 A/chicken/Dongguan/1091/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI597145 A/chicken/Dongguan/1670/2014 (A/H0) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI597131 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI597076 A/chicken/Dongguan/1506/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI597066 A/chicken/Dongguan/1505/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI597032 A/silkie chicken/Dongguan/1451/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI593194 A/chicken/Shantou/2537/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI578118 A/chicken/Shantou/1556/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI578111 A/chicken/Shantou/1554/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI578104 A/chicken/Shantou/1552/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI578097 A/chicken/Shantou/1550/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI516604 A/Hong Kong/8122430/2014 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2240/2273 (98%) EPI627854 A/Hunan/26938/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI627846 A/Hunan/26937/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI627623 A/Guangdong-Guangzhou/XN14670/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI597452 A/chicken/Dongguan/1124/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI597426 A/silkie chicken/Dongguan/986/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI596906 A/silkie chicken/Dongguan/988/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI593318 A/chicken/Shantou/4325/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI593311 A/chicken/Shantou/3057/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI593236 A/chicken/Shantou/2562/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI593222 A/chicken/Shantou/2550/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI593208 A/chicken/Shantou/2539/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI520862 A/Hong Kong/5731/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI516596 A/Hong Kong/5581/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI509878 A/Hong Kong/4495/2014 (A/H7N9) segment 2 (PB1) 4010.2 0.000000e+00 2239/2273 (98%) EPI627759 A/Guangdong-Guangzhou/XN00429/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI627719 A/Guangdong-Guangzhou/XN08664/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI627663 A/Guangdong-Guangzhou/XN00509/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI627647 A/Guangdong-Guangzhou/XN08423/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI597420 A/silkie chicken/Dongguan/981/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI597180 A/chicken/Dongguan/191/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2239/2274 (98%) EPI597166 A/chicken/Dongguan/1108/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI596918 A/chicken/Dongguan/1051/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI596758 A/chicken/Dongguan/169/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2239/2274 (98%) EPI593354 A/chicken/Shantou/4833/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI593347 A/chicken/Shantou/4832/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI593325 A/chicken/Shantou/4329/2014 (A/H0) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI593229 A/chicken/Shantou/2556/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI593215 A/chicken/Shantou/2546/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI593201 A/chicken/Shantou/2538/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI592192 A/Shenzhen/SP139/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI592185 A/Shenzhen/SP126/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI578223 A/chicken/Dongguan/1697/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2237/2273 (98%) EPI578138 A/silkie chicken/Dongguan/997/2014 (A/H7N9) segment 2 (PB1) 4004.7 0.000000e+00 2238/2273 (98%) EPI656138 A/GD-119/2014/H7N9/2014-02-19 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2236/2271 (98%) EPI628494 A/Guangdong/02124/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2237/2273 (98%) EPI628094 A/Guangdong/0012/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2237/2273 (98%) EPI627687 A/Guangdong-Guangzhou/XN15122/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2237/2273 (98%) EPI597398 A/silkie chicken/Dongguan/979/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2237/2273 (98%) EPI596802 A/chicken/Dongguan/536/2014 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2237/2273 (98%) EPI655876 A/GD-12/2014/H7N9/2014-01-03 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2235/2271 (98%) EPI627631 A/Guangdong-Guangzhou/XN14050/2014 (A/H7N9) segment 2 (PB1) 3993.6 0.000000e+00 2236/2273 (98%) EPI596879 A/silkie chicken/Dongguan/959/2014 (A/H0) segment 2 (PB1) 3993.6 0.000000e+00 2236/2274 (98%) EPI578204 A/chicken/Dongguan/1690/2014 (A/H7N9) segment 2 (PB1) 3993.6 0.000000e+00 2236/2273 (98%) EPI655884 A/GD-13/2014/H7N9/2014-01-03 (A/H7N9) segment 2 (PB1) 3991.7 0.000000e+00 2234/2271 (98%) EPI656217 A/GD-138/2014/H7N9/2014-04-05 (A/H7N9) segment 2 (PB1) 3989.9 0.000000e+00 2234/2271 (98%) EPI597020 A/silkie chicken/Dongguan/1449/2014 (A/H0) segment 2 (PB1) 3982.5 0.000000e+00 2232/2273 (98%) EPI628534 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 2 (PB1) 3977.0 0.000000e+00 2233/2273 (98%) EPI628438 A/environment/Guangdong/02621/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI628006 A/Guangdong/0048/2014 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI583234 A/Shenzhen/SP17/2014 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI581850 A/chicken/Shenzhen/3734/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI581594 A/chicken/Shenzhen/2293/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI581587 A/chicken/Shenzhen/2201/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI577924 A/chicken/Shenzhen/898/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI515867 A/Guangdong/DG-03/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI499906 A/Guangdong/02/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI498798 A/Hong Kong/734/2014 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%) EPI654151 A/Environment/GD-ZS_162/H7N9/2014-5 (A/H7N9) segment 2 (PB1) 3969.6 0.000000e+00 2228/2268 (98%) EPI656232 A/GD-151/2014/H7N9/2014-05-06 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2230/2271 (98%) EPI656036 A/GD-71/2014/H7N9/2014-01-30 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2230/2271 (98%) EPI655988 A/GD-48/2014/H7N9/2014-01-19 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2230/2271 (98%) EPI627990 A/Guangdong/0071/2014 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2231/2273 (98%) EPI627958 A/Environmental/Guangdong/00307/2013 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2231/2273 (98%) EPI581872 A/silkie chicken/Shenzhen/3782/2013 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2231/2273 (98%) EPI628526 A/environment/Guangdong/25003/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI627982 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI627751 A/Guangdong-Guangzhou/XN00457/2014 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI627743 A/Guangdong/0010/2014 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI627711 A/Guangdong-Guangzhou/XN08747/2014 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI583297 A/chicken/Shenzhen/801/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI583262 A/Shenzhen/SP38/2014 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI583241 A/Shenzhen/SP26/2014 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI581857 A/chicken/Shenzhen/3780/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI581608 A/silkie chicken/Dongguan/3049/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI577993 A/Shenzhen/SP60/2014 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI577951 A/chicken/Shenzhen/1665/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI577937 A/silkie chicken/Shenzhen/919/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI577931 A/silkie chicken/Shenzhen/918/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI509145 A/Guangxi/08309/2014 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI503497 A/Huizhou/01/2013 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2231/2273 (98%) EPI581843 A/chicken/Shenzhen/3733/2013 (A/H7N9) segment 2 (PB1) 3964.0 0.000000e+00 2230/2273 (98%) EPI515859 A/Guangdong/DG-02/2013 (A/H7N9) segment 2 (PB1) 3964.0 0.000000e+00 2231/2273 (98%) EPI656146 A/GD-120/2014/H7N9/2014-02-19 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2229/2271 (98%) EPI655996 A/GD-62/2014/H7N9/2014-01-27 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2229/2271 (98%) EPI655868 A/GD-10/2014/H7N9/2014-01-03 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2229/2271 (98%)
  10. niman
    Align Segment-ID Name Score E-Value Identity EPI869670 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI578196 A/chicken/Dongguan/1674/2014 (A/H9N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%) EPI736582 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI601321 A/chicken/Jiangxi/1255/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI600087 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI600052 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599500 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599479 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599458 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI599423 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI593590 A/chicken/Jiangxi/18526/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI593568 A/chicken/Jiangxi/18523/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI593518 A/chicken/Jiangxi/18500/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI593502 A/chicken/Jiangxi/18491/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI593482 A/chicken/Jiangxi/18486/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI593420 A/chicken/Jiangxi/18466/2014 (A/H0) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI683196 A/duck/Wuhan/WHYF14/2014 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI623615 A/chicken/Hubei/2014 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI602117 A/chicken/Jiangxi/18474/2013 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI600101 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI600073 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599528 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599493 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599472 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599465 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599444 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599416 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599408 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599394 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI599387 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI593629 A/chicken/Jiangxi/19463/2014 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI593443 A/chicken/Jiangxi/18470/2014 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI593394 A/chicken/Jiangxi/18035/2014 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI578056 A/chicken/Jiangxi/33621/2013 (A/H0) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI530391 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI602064 A/chicken/Jiangxi/19967/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2247/2281 (98%) EPI601970 A/chicken/Jiangxi/1271/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601930 A/chicken/Jiangxi/25941/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601920 A/chicken/Jiangxi/23273/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601892 A/chicken/Jiangxi/1286/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601604 A/chicken/Jiangxi/1288/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601543 A/chicken/Jiangxi/36240/2013 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601363 A/chicken/Jiangxi/1242/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601354 A/chicken/Jiangxi/1226/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601262 A/chicken/Jiangxi/1269/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI600108 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI600080 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI600066 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599814 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599747 A/chicken/Jiangxi/31856/2013 (A/H10N8) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599521 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599514 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599507 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599486 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599437 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599430 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI599401 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI593410 A/chicken/Jiangxi/18457/2014 (A/H0) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI537478 A/chicken/B15/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI537469 A/chicken/77/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI601486 A/chicken/Jiangxi/36274/2013 (A/H0) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI601332 A/chicken/Jiangxi/1257/2014 (A/H0) segment 1 (PB2) 4019.4 0.000000e+00 2245/2280 (98%) EPI602461 A/chicken/Jiangxi/3152/2014 (A/H10N8) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI602354 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI602083 A/chicken/Jiangxi/20471/2013 (A/H0) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI601613 A/chicken/Jiangxi/20420/2013 (A/H0) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI601593 A/chicken/Jiangxi/1218/2014 (A/H0) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI601024 A/chicken/Jiangxi/1289/2014 (A/H0) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI600293 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI600279 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI600094 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI600059 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI599786 A/chicken/Jiangxi/36226/2013 (A/H0) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI599733 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI599577 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI599451 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI593346 A/chicken/Shantou/4832/2014 (A/H7N9) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI591968 A/chicken/Suzhou/4833/2013 (A/H0) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI589864 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI583824 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI557811 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI601871 A/chicken/Jiangxi/36242/2013 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2280 (98%) EPI601475 A/chicken/Jiangxi/36256/2013 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2280 (98%) EPI596740 A/chicken/Jiangxi/30801/2013 (A/H0) segment 1 (PB2) 4013.9 0.000000e+00 2244/2280 (98%) EPI601911 A/chicken/Jiangxi/23241/2013 (A/H0) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI601301 A/chicken/Jiangxi/1247/2014 (A/H0) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI601211 A/chicken/Jiangxi/36293/2013 (A/H0) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI599570 A/chicken/Jiangxi/29086/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI599373 A/duck/Jiangxi/36505/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI596731 A/chicken/Jiangxi/29132/2013 (A/H0) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI593353 A/chicken/Shantou/4833/2014 (A/H7N9) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI583817 A/chicken/Suzhou/4837/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI583810 A/chicken/Suzhou/4822/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI578065 A/chicken/Jiangxi/36277/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI530485 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI530479 A/Environment/Jiangxi/03481/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI530467 A/Environment/Jiangxi/03470/2013 (A/H9N2) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI530415 A/Environment/Jiangxi/10615/2014 (A/H10N8) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI601311 A/chicken/Jiangxi/1250/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2280 (98%) EPI602003 A/chicken/Jiangxi/23786/2013 (A/H0) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%)
  11. niman
    Align Segment-ID Name Score E-Value Identity EPI869668 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI838159 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI682983 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682982 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI682978 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI627260 A/Guangdong/15SF021/2015 (A/H7N9) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI627212 A/Fujian/25/2015 (A/H7N9) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI627108 A/Guangdong/15SF043/2015 (A/H7N9) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI627044 A/Guangdong/15SF081/2015 (A/H7N9) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI838162 A/chicken/Jiangsu/SIC42/2015 (A/H9N2) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI769578 A/Fujian/16/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI769570 A/Fujian/10/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI682977 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI681159 A/chicken/Zhejiang/727192/2014 (A/H9N2) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627308 A/Fujian/8/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627292 A/Fujian/19/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI627252 A/Fujian/7/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI566126 A/Fujian/09273/2015 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI846034 A/chicken/Anhui/AH120/2015 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI729781 A/chicken/Shanghai/06/2015 (A/H9N2) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI628747 A/Anhui/33225/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627220 A/Fujian/24/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627132 A/Zhejiang/1/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627100 A/Fujian/17/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI627012 A/Jiangsu/18828/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593614 A/chicken/Jiangxi/18527/2014 (A/H0) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593576 A/chicken/Jiangxi/18523/2014 (A/H0) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593551 A/chicken/Jiangxi/18515/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593513 A/chicken/Jiangxi/18491/2014 (A/H0) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593479 A/chicken/Jiangxi/18483/2014 (A/H0) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593472 A/chicken/Jiangxi/18482/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593430 A/chicken/Jiangxi/18466/2014 (A/H0) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI593408 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI566079 A/Guizhou/03240/2015 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI566071 A/Jiangsu/06306/2014 (A/H7N9) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI846042 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI833717 A/Fujian/3/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI740733 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI729782 A/chicken/Shanghai/15/2015 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI729780 A/chicken/Shanghai/02/2015 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI729462 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI729454 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI682985 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI681155 A/chicken/Zhejiang/3C34/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI680963 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI680962 A/chicken/Zhejiang/C71921/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628811 A/Zhejiang/11/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628555 A/Anhui/40094/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627364 A/Fujian/22/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627148 A/Zhejiang/34/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI627140 A/Zhejiang/35/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI626996 A/Guangdong/15SF080/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI593441 A/chicken/Jiangxi/18468/2014 (A/H0) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI583126 A/chicken/Shaoxing/5186/2013 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI531804 A/Taiwan/2/2014 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI529239 A/wild chicken/Shanghai/C1/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI838152 A/chicken/Shandong/SIC35/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI838148 A/chicken/Shandong/SIC24/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI769642 A/Fujian/22/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI769586 A/Fujian/18/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI681154 A/chicken/Zhejiang/3C28/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI680978 A/chicken/Zhejiang/C58/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI680959 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI639590 A/chicken/Hangzhou/174/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628787 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628779 A/Shandong-Taian/01/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628675 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628667 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628603 A/Environment/Anhui/39280/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628563 A/Anhui/40095/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628547 A/Environment/Hunan/39719/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627356 A/Fujian/5/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627156 A/Zhejiang/3/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI621117 A/chicken/Quzhou/2/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI602002 A/black chicken/Jiangxi/10139/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI601992 A/black chicken/Jiangxi/10136/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI601974 A/chicken/Jiangxi/10122/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI601533 A/chicken/Jiangxi/23772/2013 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI599582 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI594412 A/chicken/Rizhao/2658/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI594363 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593565 A/chicken/Jiangxi/18517/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593273 A/chicken/Jiangxi/15520/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593256 A/chicken/Jiangxi/15492/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593133 A/chicken/Jiangxi/14502/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI592006 A/silkie chicken/Shaoxing/5371/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI583857 A/chicken/Rizhao/3052/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI583638 A/chicken/Dongguan/3186/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI576626 A/environment/Shanghai/PD-JZ-01/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI560401 A/British Columbia/1/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI530501 A/Environment/Jiangxi/10663/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI497876 A/Wuxi/4/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI497860 A/Zhenjiang/1/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI497817 A/Nanjing/2/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI469533 A/Jiangsu/1/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI468969 A/Jiangsu/1/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI467339 A/environment/Wuxi/1/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI460770 A/Nanjing/3/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI457872 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI457856 A/chicken/Jiangsu/SC099/2013 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%)
  12. niman
    Align Segment-ID Name Score E-Value Identity EPI869672 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI833716 A/Fujian/3/2016 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%) EPI740737 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%) EPI712925 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%) EPI627160 A/Zhejiang/3/2015 (A/H7N9) segment 6 (NA) 2494.1 0.000000e+00 1382/1398 (98%) EPI707983 A/chicken/Shanghai/S3086/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707982 A/chicken/Shanghai/S3085/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707981 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707904 A/duck/Jiangsu/J3619/2014 (A/H7N9) segment 6 (NA) 2488.6 0.000000e+00 1382/1399 (98%) EPI707984 A/chicken/Shanghai/S3087/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707980 A/chicken/Shanghai/S3075/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707902 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707889 A/chicken/Shanghai/S3169/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707888 A/chicken/Shanghai/S3167/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI707887 A/chicken/Shanghai/S3140/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI627184 A/Zhejiang/33/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1380/1398 (98%) EPI566137 A/Jiangsu/06307/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1381/1399 (98%) EPI552401 A/Zhejiang/17/2014 (A/H7N9) segment 6 (NA) 2483.0 0.000000e+00 1380/1398 (98%) EPI729461 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI683028 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI683027 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI628767 A/Zhejiang/8/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI628735 A/Anhui/33223/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI627488 A/Fujian/19/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI627176 A/Zhejiang/5/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI593638 A/chicken/Jiangxi/19463/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI593625 A/chicken/Jiangxi/19426/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI593383 A/chicken/Jiangxi/18008/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI593255 A/chicken/Jiangxi/15492/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592610 A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592594 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592579 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592570 A/chicken/Jiangxi/13540/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592534 A/chicken/Jiangxi/13526/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592526 A/chicken/Jiangxi/13525/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592517 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592510 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592486 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592462 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592283 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI592246 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI521919 A/Taiwan/2/2014 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI628543 A/Beijing/40610/2015 (A/H7N9) segment 6 (NA) 2475.6 0.000000e+00 1379/1399 (98%) EPI729453 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI707977 A/chicken/Shanghai/S3061/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1379/1399 (98%) EPI707903 A/chicken/Shanghai/S3880/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1379/1399 (98%) EPI628799 A/Fujian/28/2015 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI628383 A/Zhejiang/1/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI628351 A/Zhejiang/5/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI628191 A/Jiangsu/09389/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI627919 A/Xinjiang/73030/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI627911 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI627592 A/Zhejiang/13/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI627440 A/Anhui/01887/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI627016 A/Jiangsu/18828/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1379/1399 (98%) EPI593583 A/chicken/Jiangxi/18524/2014 (A/H0) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI593543 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI593453 A/chicken/Jiangxi/18470/2014 (A/H0) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI593400 A/chicken/Jiangxi/18035/2014 (A/H0) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI593132 A/chicken/Jiangxi/14502/2014 (A/H0) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI592276 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 6 (NA) 2471.9 0.000000e+00 1378/1398 (98%) EPI627480 A/Fujian/17/2014 (A/H7N9) segment 6 (NA) 2468.2 0.000000e+00 1377/1398 (98%) EPI769577 A/Fujian/16/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI707978 A/chicken/Shanghai/S3064/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1378/1399 (98%) EPI707893 A/chicken/Shanghai/S3307/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI683029 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI628831 A/Zhejiang/9/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI628807 A/Fujian/27/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI628743 A/Anhui/33224/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI628431 A/Shanghai/02619/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI628247 A/Jiangsu/09041/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627312 A/Fujian/8/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627304 A/Fujian/11/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627296 A/Fujian/19/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627280 A/Fujian/9/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627104 A/Fujian/17/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI593526 A/chicken/Jiangxi/18500/2014 (A/H0) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI593176 A/chicken/Jiangxi/14530/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI593169 A/chicken/Jiangxi/14518/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI566130 A/Fujian/09273/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI566099 A/XinjiangBintuan/99117/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI541776 A/Taiwan/3/2013 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI535130 A/Jiaxing/20/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI531470 A/Shanghai/01/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627512 A/Environment/Jiangsu/98337/2014 (A/H7N9) segment 6 (NA) 2462.7 0.000000e+00 1377/1399 (98%) EPI769569 A/Fujian/10/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI707890 A/chicken/Shanghai/S3180/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI692616 A/Huai'an/002/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628815 A/Zhejiang/11/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628703 A/Environment/Hunan/07626/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628655 A/Environment/Hunan/20986/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628583 A/Environment/Anhui/33248/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628559 A/Anhui/40094/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI628551 A/Environment/Hunan/39719/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628287 A/Environment/Hunan/07836/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628183 A/Hunan/09193/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI628087 A/Beijing/09149/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI627456 A/Fujian/3/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI627384 A/Guangdong/02497/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI627352 A/Environment/Xinjiang/00347/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%)
  13. niman
    Align Segment-ID Name Score E-Value Identity EPI869673 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%) EPI833714 A/Fujian/3/2016 (A/H7N9) segment 4 (HA) 3081.3 0.000000e+00 1678/1683 (99%) EPI740738 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 4 (HA) 3070.3 0.000000e+00 1676/1683 (99%) EPI712926 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 4 (HA) 3064.7 0.000000e+00 1675/1683 (99%) EPI627017 A/Jiangsu/18828/2014 (A/H7N9) segment 4 (HA) 3009.3 0.000000e+00 1665/1683 (98%) EPI627513 A/Environment/Jiangsu/98337/2014 (A/H7N9) segment 4 (HA) 3003.8 0.000000e+00 1664/1683 (98%) EPI566138 A/Jiangsu/06307/2014 (A/H7N9) segment 4 (HA) 3000.1 0.000000e+00 1663/1683 (98%) EPI627441 A/Anhui/01887/2014 (A/H7N9) segment 4 (HA) 2998.2 0.000000e+00 1663/1683 (98%) EPI627177 A/Zhejiang/5/2015 (A/H7N9) segment 4 (HA) 2998.2 0.000000e+00 1663/1683 (98%) EPI593581 A/chicken/Jiangxi/18524/2014 (A/H0) segment 4 (HA) 2998.2 0.000000e+00 1663/1683 (98%) EPI593396 A/chicken/Jiangxi/18035/2014 (A/H0) segment 4 (HA) 2998.2 0.000000e+00 1663/1683 (98%) EPI708010 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 4 (HA) 2994.5 0.000000e+00 1658/1676 (98%) EPI707997 A/chicken/Shanghai/S3167/2014 (A/H7N9) segment 4 (HA) 2994.5 0.000000e+00 1658/1676 (98%) EPI707995 A/chicken/Shanghai/S3123/2014 (A/H7) segment 4 (HA) 2994.5 0.000000e+00 1658/1676 (98%) EPI707994 A/chicken/Shanghai/S3090/2014 (A/H7N9) segment 4 (HA) 2994.5 0.000000e+00 1658/1676 (98%) EPI707989 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 4 (HA) 2994.5 0.000000e+00 1658/1676 (98%) EPI707987 A/chicken/Shanghai/S3065/2014 (A/H7N9) segment 4 (HA) 2994.5 0.000000e+00 1658/1676 (98%) EPI627832 A/Xinjiang/75802/2014 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI621120 A/Quzhou/1/2015 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI621115 A/chicken/Quzhou/2/2015 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI593541 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI593521 A/chicken/Jiangxi/18500/2014 (A/H0) segment 4 (HA) 2992.7 0.000000e+00 1663/1684 (98%) EPI593447 A/chicken/Jiangxi/18470/2014 (A/H0) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI592592 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI592568 A/chicken/Jiangxi/13540/2014 (A/H0) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI592460 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI592281 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI592274 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI566108 A/XinjiangBintuan/99118/2014 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI682923 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI628832 A/Zhejiang/9/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI628800 A/Fujian/28/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI628632 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI627465 A/Fujian/2/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI627385 A/Guangdong/02497/2014 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI627305 A/Fujian/11/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI627265 A/Guangdong/15SF021/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI627137 A/Zhejiang/1/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI621127 A/Quzhou/2/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI593388 A/chicken/Jiangxi/18012/2014 (A/H0) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI592607 A/chicken/Jiangxi/13554/2014 (A/H0) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI592532 A/chicken/Jiangxi/13526/2014 (A/H0) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI592524 A/chicken/Jiangxi/13525/2014 (A/H0) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI592515 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI592484 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI566084 A/Guizhou/03240/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1661/1683 (98%) EPI592508 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 4 (HA) 2985.3 0.000000e+00 1660/1683 (98%) EPI707986 A/chicken/Shanghai/S3064/2014 (A/H7N9) segment 4 (HA) 2983.5 0.000000e+00 1656/1676 (98%) EPI769575 A/Fujian/16/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI769567 A/Fujian/10/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI692632 A/Huai'an/002/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI692614 A/chicken/Huai'an/003/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI682919 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI682918 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI628640 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI628600 A/Environment/Fujian/23611/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627920 A/Xinjiang/73030/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627912 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627257 A/Fujian/7/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627233 A/Fujian/23/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627193 A/Guangdong/15SF020/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627113 A/Guangdong/15SF043/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627041 A/Fujian/6/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI627001 A/Guangdong/15SF080/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI626985 A/Jiangsu/22184/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI593167 A/chicken/Jiangxi/14518/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI593146 A/chicken/Jiangxi/14513/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI592632 A/chicken/Jiangxi/14023/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI592577 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI592244 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI580387 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI580379 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI566076 A/Jiangsu/06306/2014 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1683 (98%) EPI729459 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI729451 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI708012 A/duck/Jiangsu/J3619/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1651/1671 (98%) EPI703994 A/chicken/China/028/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI692631 A/Huai'an/074/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI628728 A/Anhui/33228/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI628416 A/environment/Jiangsu/03137/2013 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627225 A/Fujian/24/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627217 A/Fujian/25/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627105 A/Fujian/17/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627073 A/Guangdong/15SF050/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627049 A/Guangdong/15SF081/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593632 A/chicken/Jiangxi/19463/2014 (A/H0) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593620 A/chicken/Jiangxi/19426/2014 (A/H0) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593558 A/chicken/Jiangxi/18517/2014 (A/H0) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593548 A/chicken/Jiangxi/18515/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593506 A/chicken/Jiangxi/18491/2014 (A/H0) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593413 A/chicken/Jiangxi/18457/2014 (A/H0) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593381 A/chicken/Jiangxi/18008/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593278 A/chicken/Jiangxi/15524/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI593244 A/duck/Jiangxi/15044/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1660/1684 (98%) EPI593174 A/chicken/Jiangxi/14530/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI521917 A/Taiwan/2/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI521915 A/Taiwan/1/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI566052 A/Xinjiang/05916/2014 (A/H7N9) segment 4 (HA) 2972.4 0.000000e+00 1658/1683 (98%) EPI708077 A/chicken/Jiangsu/J3494/2014 (A/H7N9) segment 4 (HA) 2970.5 0.000000e+00 1650/1671 (98%) EPI628824 A/Zhejiang/10/2015 (A/H7N9) segment 4 (HA) 2970.5 0.000000e+00 1658/1683 (98%)
  14. niman
    Isolate name: A/Hong Kong/VB16184091/2016 Isolate ID: EPI_ISL_239994 Passage details/history: Original Type: A / H7N9 Lineage: Sample information Collection date: 2016-12-19 Host Human Additional host information: Zip code: Patient status: In-patient Last vaccinated: In-vivo pathogenicity test: Location: Hong Kong (SAR) Additional location information: Patient age: 75 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Nasopharyngeal Institute information Originating lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the sample provider: Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Submitting lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the submitting laboratory: VB16184091 Authors: Mak,G.C.; Lo,J.Y.C. Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Hong Kong/VB16184091/2016_s1 2280 EPI869670 PB1 A/Hong Kong/VB16184091/2016_s2 2274 EPI869671 PA A/Hong Kong/VB16184091/2016_s3 2151 EPI869669 HA A/Hong Kong/VB16184091/2016_s4 1683 EPI869673 NP A/Hong Kong/VB16184091/2016_s5 1497 EPI869666 NA A/Hong Kong/VB16184091/2016_s6 1398 EPI869672 MP A/Hong Kong/VB16184091/2016_s7 982 EPI869668 NS A/Hong Kong/VB16184091/2016_s8 838 EPI869667 Submitter information Submitter: Mak, Gannon Submission Date: 2016-12-23 Last modifier: Mak, Gannon Last modified: 2016-12-23 Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR)
  15. niman
    CHP has release full h7N9 sequence, A/Hong Kong/VB16184091/2016, (at GISAID) from December case, 75M.
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    HEALTH DEC 22 2016, 6:49 PM ET Vet Catches Bird Flu From a Cat in New York by MAGGIE FOX SHARE A vet at a New York City animal shelter where cats were infected with a strain of bird flu has also been infected, health officials said Thursday. The vet only had mild illness from the virus, called H7N2, the New York City Department of Health said. Play Facebook Twitter Google Plus Embed From H1N1 to H5N2, What's in a Flu Name? 0:42 "The illness was mild, short-lived and has resolved," the department said in a statement. "More than 160 Animal Care Centers of NYC employees and volunteers, including several people who had similar exposure to sick cats, were screened by the Health Department and not found to have infection with the H7N2 virus," the department said. Related: Bird Flu Infects Cats at NYC Shelter "Additionally, the Health Department contacted more than 80 percent of the people who adopted cats from the Manhattan shelter, and none is suspected of having H7N2," the department added. It's unusual for bird flu to affect cats. "Since last week, more than 100 cats have tested positive for H7N2 across all NYC shelters," the department said. "This was expected because the virus is highly contagious among cats and cats are sometimes moved between shelters. All of the newly infected cats are experiencing mild illness and have been separated from other animals in the shelters. They are expected to recover." Vets, doctors and other scientists keep an eye on bird flu because it can and does spread to people and has the potential to cause epidemics. So far, H7N2 hasn't. It has only ever infected a few people. Related: Keep an Eye Out for H5N2, CDC Says Still, influenza worries doctors. "As a general rule, influenza is what concerns us most," Centers for Disease Control and Prevention director Dr. Thomas Frieden said. "We are always concerned about the possibility of re-assortment between animal flu and human flu so, this is something that we have been watching very closely." "THE HEALTH DEPARTMENT CONTACTED MORE THAN 80 PERCENT OF THE PEOPLE WHO ADOPTED CATS FROM THE MANHATTAN SHELTER, AND NONE IS SUSPECTED OF HAVING H7N2." Flu viruses mutate constantly and swap big pieces with one another. New pandemics of influenza come when a "new" strain emerges from this mixing process, called re-assortment. Especially worrying is when a strain that easily infects people picks up bits and pieces from animal strains, creating an easily transmitted flu strain that could also be deadly. Related: H7N9 Flu Spreads Like Ordinary Flu That doesn't appear to have happened with H7N2 among the cats. The vet who was infected had been testing the sick cats, so had prolonged, close contact with them. "But any time we have a new strain of flu spreading in animals and in humans we are very much on the alert," Frieden said. Ordinary influenza is bad enough, killing anywhere from 4,000 to 50,000 Americans a year. New pandemic strains can kill many times that. People can and do catch flu from animals — and vice-versa. Pigs commonly both catch flu from people and transmit it. The ongoing occasional human cases of H5N1 bird flu and H7N2 bird flu are traced to poultry markets. http://www.nbcnews.com/health/health-news/vet-catches-bird-flu-cat-new-york-n699316
  18. niman
    Map Update Statin Islland https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1E-GiK3kfvi7q21vE1RhtxZnPqKY&ll=40.52791113217633%2C-74.23810299384195&z=20
  19. niman
    Map Update Brooklyn https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1E-GiK3kfvi7q21vE1RhtxZnPqKY&ll=40.6637973941651%2C-73.87690508009416&z=19
  20. niman
    Map Update Manhattan https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1E-GiK3kfvi7q21vE1RhtxZnPqKY&ll=40.79264127007367%2C-73.93964928788796&z=20
  21. niman
    Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1E-GiK3kfvi7q21vE1RhtxZnPqKY&ll=40.79255699906025%2C-73.93946823877945&z=20
  22. niman
    Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1E-GiK3kfvi7q21vE1RhtxZnPqKY&ll=40.79255699906025%2C-73.93946823877945&z=20
  23. niman
    Our Care Center Locations Manhattan Animal Care Center 326 East 110th Street (between 1st and 2nd Aves.) New York, NY 10029 Shelter Hours: 8AM - 8PM, 7 days a week Adoption Hours: Mon-Fri: 12-8pm, Sat & Sun: 10am-6pm Intake Hours: Open 24 hours for stray and owner surrender intakes Closed on all Holidays and Training Days, as listed on the right side of this page. Map & Directions Brooklyn Animal Care Center 2336 Linden Boulevard Brooklyn, NY 11208 Shelter Hours: 8AM - 8PM, 7 days a week Adoption Hours:Mon-Fri: 12-8pm, Sat & Sun: 10am-6pm Closed on all Holidays and Training Days, as listed on the right side of this page. Map & Directions Staten Island Animal Care Center 3139 Veterans Road West Staten Island, NY 10309 Shelter Hours: 8AM - 8PM, 7 days a week Adoption Hours: Mon-Fri: 12-8pm, Sat & Sun: 10am-6pm Closed on all Holidays and Training Days, as listed on the right side of this page. Map & Directions Queens Admissions Center 92-29 Queens Boulevard Rego Park, NY 11374 Admissions Hours: 8AM - 8PM, 7 days a week For services on other days and all adoption services, please visit the Brooklyn Care Center. NOTE: Admissions Center will open at 11 AM on January 25, 2016 Closed on all Holidays, as listed below on the right side of this page. Map & Directions Bronx Admissions Center 464 East Fordham Road Bronx, NY 10458 Admissions Hours: 8AM - 8PM, 7 days a week For services on other days and all adoption services, please visit the Manhattan Care Center. NOTE: Admissions Center will open at 11 AM on January 25, 2016 Closed on all Holidays, as listed below on the right side of this page. Map & Directions Headquarters Administrative Offices ONLY - No animals at this location 11 Park Place, Suite 805 New York, NY 10007 http://www.nycacc.org/locations.htm
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