niman

Align Segment-ID Name Score E-Value Identity EPI869808 A/duck/France/161108h/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2140/2148 (99%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3834.8 0.000000e+00 2126/2151 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3790.4 0.000000e+00 2119/2152 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3735.0 0.000000e+00 2110/2153 (98%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3696.3 0.000000e+00 2102/2152 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3629.8 0.000000e+00 2089/2151 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3579.9 0.000000e+00 2080/2151 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3568.8 0.000000e+00 2078/2151 (96%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI749127 A/environment/Chongqing/02412/2012 (A/H5N1) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3552.2 0.000000e+00 2076/2152 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI345928 A/whistling swan/Shimane/580/2002 (A/H5N3) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%)

Align Segment-ID Name Score E-Value Identity EPI869807 A/duck/France/161108h/2016 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2264/2271 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4135.8 0.000000e+00 2262/2274 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4132.1 0.000000e+00 2261/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4132.1 0.000000e+00 2261/2274 (99%) EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2260/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4071.1 0.000000e+00 2250/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3928.9 0.000000e+00 2225/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3906.8 0.000000e+00 2222/2275 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3906.8 0.000000e+00 2221/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3895.7 0.000000e+00 2220/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3884.6 0.000000e+00 2217/2274 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3875.4 0.000000e+00 2212/2269 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3856.9 0.000000e+00 2213/2275 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3856.9 0.000000e+00 2213/2275 (97%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3855.1 0.000000e+00 2200/2257 (97%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3834.8 0.000000e+00 2209/2275 (97%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%)

Align Segment-ID Name Score E-Value Identity EPI869806 A/duck/France/161108h/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI867457 A/mute swan/Croatia/70/2016 (A/H5N8) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI618102 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI749574 A/Environment/Chongqing/45208/2015 (A/H5N6) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI527564 A/common goldeneye/Mongolia/1216/2010 (A/H1N1) segment 1 (PB2) 3917.9 0.000000e+00 2227/2280 (97%) EPI527545 A/tufted duck/Mongolia/1409/2010 (A/H1N1) segment 1 (PB2) 3917.9 0.000000e+00 2227/2280 (97%) EPI527563 A/common goldeneye/Mongolia/1238/2010 (A/H1N1) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%) EPI618117 A/black-headed gull/Republic of Georgia/1/2010 (A/H11N1) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI324555 A/quail/Lebanon/273/2010 (A/H9N2) segment 1 (PB2) 3884.6 0.000000e+00 2221/2280 (97%) EPI617950 A/black-headed gull/Republic of Georgia/2/2011 (A/H9N1) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI692509 A/duck/Hunan/S1166/2010 (A/H4N6) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI750103 A/chicken/Taiwan/01174/2015 (A/H5N3) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI588965 A/chicken/Taiwan/a174/2015 (A/H5N3) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI617839 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI463584 A/tundra swan/Shimane/3211A001/2011 (A/H5N2) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI750183 A/goose/Taiwan/01038/2015 (A/H5N3) segment 1 (PB2) 3818.1 0.000000e+00 2211/2282 (96%) EPI588973 A/duck/Taiwan/a068/2015 (A/H5N8) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI574291 A/duck/Vietnam/LBM48/2011 (A/H3N2) segment 1 (PB2) 3812.6 0.000000e+00 2208/2280 (96%) EPI401796 A/canvasback/Xianghai/428/2011 (A/H5N2) segment 1 (PB2) 3812.6 0.000000e+00 2208/2280 (96%) EPI617989 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI560058 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI469129 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI750185 A/goose/Taiwan/01042/2015 (A/H5N3) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI750111 A/duck/Taiwan/A3400/2015 (A/H5N8) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI527553 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI372391 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI617797 A/black-headed gull/Republic of Georgia/7/2012 (A/H2N7) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI596394 A/muscovy duck/Vietnam/LBM115/2012 (A/H3N2) segment 1 (PB2) 3784.9 0.000000e+00 2203/2280 (96%) EPI775005 A/duck/Hebei/B1647-1/2011 (A/H3N2) segment 1 (PB2) 3779.4 0.000000e+00 2204/2282 (96%) EPI775000 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 1 (PB2) 3779.4 0.000000e+00 2204/2282 (96%) EPI395159 A/duck/Vietnam/LBM1/2011 (A/H4N6) segment 1 (PB2) 3779.4 0.000000e+00 2203/2281 (96%) EPI692469 A/duck/Henan/S4179/2009 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI619253 A/mallard/Sweden/5994/2005 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI387906 A/mallard/Korea/1041/2010 (A/H10N8) segment 1 (PB2) 3773.8 0.000000e+00 2201/2280 (96%) EPI361736 A/lesser whistling-duck/Thailand/CU-W3946/2010 (A/H12N1) segment 1 (PB2) 3773.8 0.000000e+00 2183/2253 (96%) EPI618220 A/mallard/Sweden/5944/2005 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2201/2281 (96%) EPI619239 A/mallard/Sweden/5927/2005 (A/H0) segment 1 (PB2) 3762.7 0.000000e+00 2200/2281 (96%) EPI262712 A/aquatic bird/Korea/w347/2008 (A/H5N2) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI602452 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI599870 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI508037 A/wild duck/Korea/CSM42-34/2011 (A/H7N9) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI508036 A/wild duck/Korea/CSM42-1/2011 (A/H7N9) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI461612 A/duck/Hunan/S11893/2012 (A/H4N6) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI703416 A/duck/Yunan/V286/2012 (A/H1N2) segment 1 (PB2) 3749.8 0.000000e+00 2184/2261 (96%) EPI602445 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602438 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602400 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602379 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602372 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI599877 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI599856 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI599835 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602386 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 1 (PB2) 3742.4 0.000000e+00 2195/2280 (96%) EPI602326 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 1 (PB2) 3742.4 0.000000e+00 2195/2280 (96%) EPI361726 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 1 (PB2) 3742.4 0.000000e+00 2175/2249 (96%) EPI602424 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602393 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602347 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602340 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602333 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI599863 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI599842 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI599828 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI372493 A/pied avocet/Ukraine/05848-NAMRU3/2006 (A/H10N4) segment 1 (PB2) 3740.6 0.000000e+00 2197/2282 (96%) EPI602431 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 1 (PB2) 3735.0 0.000000e+00 2193/2280 (96%) EPI602407 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 1 (PB2) 3735.0 0.000000e+00 2194/2280 (96%) EPI703415 A/duck/Fujian/JF47/2014 (A/H1N1) segment 1 (PB2) 3733.2 0.000000e+00 2181/2261 (96%) EPI599849 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 1 (PB2) 3729.5 0.000000e+00 2194/2281 (96%) EPI600182 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600176 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600170 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600162 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600156 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI591921 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI361746 A/lesser whistling-duck/Thailand/CU-W3947/2010 (A/H12N1) segment 1 (PB2) 3720.3 0.000000e+00 2164/2239 (96%) EPI372280 A/shoveler/Egypt/00597-NAMRU3/2004 (A/H7N1) segment 1 (PB2) 3718.4 0.000000e+00 2192/2281 (96%) EPI395168 A/muscovy duck/Vietnam/LBM14/2011 (H3N2) (A/H3N2) segment 1 (PB2) 3712.9 0.000000e+00 2191/2281 (96%) EPI361718 A/watercock/Thailand/CU-W3699/2009 (A/H12N1) segment 1 (PB2) 3709.2 0.000000e+00 2176/2259 (96%) EPI372509 A/garganey/Ukraine/05835-NAMRU3/2006 (A/H8N4) segment 1 (PB2) 3707.3 0.000000e+00 2191/2282 (96%) EPI372383 A/teal/Egypt/13203-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3701.8 0.000000e+00 2190/2282 (95%) EPI363564 A/wild duck/Jiangxi/8462/2006 (A/H6N1) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI296631 A/mallard/Sweden/95/2005 (A/H7N7) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI591915 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI372368 A/shoveler/Egypt/13251-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3696.3 0.000000e+00 2189/2282 (95%) EPI372288 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 1 (PB2) 3696.3 0.000000e+00 2188/2281 (95%) EPI591909 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 1 (PB2) 3690.7 0.000000e+00 2186/2280 (95%) EPI372304 A/teal/Egypt/00835-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3690.7 0.000000e+00 2187/2281 (95%) EPI372296 A/teal/Egypt/00688-NAMRU3/2004 (A/H11N9) segment 1 (PB2) 3690.7 0.000000e+00 2188/2282 (95%) EPI270059 A/aquatic bird/India/NIV-17095/2007 (A/H11N1) segment 1 (PB2) 3690.7 0.000000e+00 2187/2281 (95%) EPI618307 A/mallard/Sweden/68621/2007 (A/H11N9) segment 1 (PB2) 3685.2 0.000000e+00 2187/2282 (95%) EPI513753 A/mallard/Sweden/79978/2008 (A/H4N6) segment 1 (PB2) 3679.6 0.000000e+00 2186/2282 (95%) EPI618293 A/mallard/Sweden/69639/2007 (A/H11N9) segment 1 (PB2) 3674.1 0.000000e+00 2185/2282 (95%) EPI618544 A/mallard/Sweden/101754/2009 (A/H0) segment 1 (PB2) 3668.6 0.000000e+00 2184/2282 (95%) EPI514604 A/mallard/Sweden/50108/2006 (A/H4N6) segment 1 (PB2) 3668.6 0.000000e+00 2183/2281 (95%) EPI178535 A/Duck/Italy/62330/2006 (A/H10N7) segment 1 (PB2) 3668.6 0.000000e+00 2184/2282 (95%) EPI618253 A/mallard/Sweden/79390/2008 (A/H11N9) segment 1 (PB2) 3663.0 0.000000e+00 2183/2282 (95%) EPI310338 A/duck/Zambia/04/2008 (A/H3N8) segment 1 (PB2) 3663.0 0.000000e+00 2183/2282 (95%) EPI704296 A/duck/Mongolia/141/2015 (A/H0N2) segment 1 (PB2) 3657.5 0.000000e+00 2180/2280 (95%) EPI372320 A/shoveler/Egypt/09864-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3657.5 0.000000e+00 2182/2282 (95%) EPI704500 A/duck/Mongolia/326/2015 (A/H10N3) segment 1 (PB2) 3651.9 0.000000e+00 2179/2280 (95%)

Align Segment-ID Name Score E-Value Identity EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1796.1 0.000000e+00 976/978 (99%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1783.1 0.000000e+00 976/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1783.1 0.000000e+00 976/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1783.1 0.000000e+00 976/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1694.5 0.000000e+00 960/982 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%)

Align Segment-ID Name Score E-Value Identity EPI869811 A/duck/France/161108h/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1403/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2544.0 0.000000e+00 1396/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2503.3 0.000000e+00 1389/1406 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2470.1 0.000000e+00 1383/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1381/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2436.9 0.000000e+00 1377/1406 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2390.7 0.000000e+00 1350/1378 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1366/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1357/1398 (97%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1351/1394 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1352/1395 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%)

Align Segment-ID Name Score E-Value Identity EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1693/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1694/1705 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI675774 A/duck/Liaoning/S1001/2014 (A/H5N8) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1664/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1598/1609 (99%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2911.4 0.000000e+00 1660/1702 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1662/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1660/1705 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1656/1705 (97%)

Isolate name: A/duck/France/161108h/2016 Isolate ID: EPI_ISL_240012 Passage details/history: Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-28 Host Duck Additional host information: Domestic status: Domestic Is vaccinated: Location: France / Midi-Pyrenees / Departement du Tarn Additional location information: Health status: Specimen source: Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: French Agency for Food, Environmental and Occupational Health Sample ID given by the submitting laboratory: Authors: Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/duck/France/161108h/2016 2341 EPI869806 PB1 A/duck/France/161108h/2016 2297 EPI869807 PA A/duck/France/161108h/2016 2228 EPI869808 HA A/duck/France/161108h/2016 1704 EPI869809 NP A/duck/France/161108h/2016 1565 EPI869810 NA A/duck/France/161108h/2016 1413 EPI869811 MP A/duck/France/161108h/2016 982 EPI869812 NS A/duck/France/161108h/2016 877 EPI869813 Submitter information Submitter: Briand, Francois-Xavier Submission Date: 2016-12-27 Last modifier: Briand, Francois-Xavier Last modified: 2016-12-28 Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France

French Agency for Food, Environmental and Occupational Health has release full set of H5N8 sequence from Tarn, A/duck/France/161108h/2016/

Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1E-GiK3kfvi7q21vE1RhtxZnPqKY&ll=40.634611595957%2C-74.19978481426239&z=9

Out of 125 shelter cats with bird flu, 4 on Staten Island Testing cats for the avian flu has been ongoing since November and adoptions have been suspended. (File photo) PrintEmail By Rachel Shapiro | [email protected] Email the author | Follow on Twitter on December 27, 2016 at 3:36 PM STATEN ISLAND, N.Y. - People hoping to adopt a cat from a city shelter for Christmas or Hanukkah were disappointed after a breakout of bird flu sickened 125 shelter felines, and adoptions were suspended while Animal Care Centers of NYC gets a hold on the virus. As of Dec. 20, there were 91 cats in the Manhattan ACC shelter that tested positive for H7N2, the bird flu, 30 in Brooklyn, and four in Staten Island out of a total 201 cats with test results. Additional test results are pending. According to the city Department of Health and Mental Hygiene, only the cats in NYC animal shelters have tested positive for H7N2. Cats that have been adopted from the ACC have not been tested. More than 350 people were screened for the virus, with one veterinarian testing positive. Flu symptoms were mild and the person has completely recovered, according to the Health Department. Testing began mid-November, first with 45 cats in an ACC shelter in Manhattan testing positive for the flu, most experiencing mild illness and expected to recover. One elderly cat had underlying health issues, developed severe pneumonia and was humanely euthanized, the Health Department said. Signs of the virus include sneezing, coughing, runny nose and runny or red eyes. It can spread if a cat has contact with another infected cat or with objects (such as kitty litter or food bowls) used by sick animals. There is no influenza vaccine for cats and there are no medicines available to treat the flu in cats. Veterinarians may use other medicines, such as pain relievers, antibiotics or intravenous fluids, to help the cat recover. Illness is usually mild and most cats recover quickly. The infected cats have been separated so as not to expose other animals at the shelter. The Health Department, working with ACC, the ASPCA and New York City Emergency Management, will soon move cats to a new quarantine location, which will allow shelters to resume their normal intake and adoption of cats. Cats are the only animals that have tested positive for the flu, so all other shelter operations have continued. Until cats are removed to the new location and the cat facilities are disinfected, New Yorkers should not to drop off cats at any ACC shelter. The risk of transmission of H7N2 from cats to humans is low. The symptoms of seasonal flu viruses and H7N2 are similar, and medications that treat seasonal flu also treat H7N2 virus infections, the Health Department said. http://www.silive.com/news/index.ssf/2016/12/out_of_125_shelter_cats_with_a.html

Isolate name: A/decoy_duck/France/161104e/2016 Isolate ID: EPI_ISL_239997 Passage details/history: field sample Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-26 Host Duck Additional host information: Domestic status: Is vaccinated: Location: France / Region Nord-Pas-De Calais / Departement du Pas-de-Calais Additional location information: Health status: Specimen source: Tracheal swab Strain or commercial product name used for vaccination: Institute information Originating lab: Anses (Ploufragan-Plouzané) Sample ID given by the sample provider: Address: Anses (Ploufragan-Plouzané) Rue de Beaucemaine 22440 Ploufragan France Submitting lab: French Agency for Food, Environmental and Occupational Health Sample ID given by the submitting laboratory: Authors: Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/decoy_duck/France/161104e/2016 2280 EPI869684 PB1 A/decoy_duck/France/161104e/2016 2297 EPI869685 PA A/decoy_duck/France/161104e/2016 2151 EPI869686 HA A/decoy_duck/France/161104e/2016 1704 EPI869687 NP A/decoy_duck/France/161104e/2016 1463 EPI869688 NA A/decoy_duck/France/161104e/2016 1411 EPI869689 MP A/decoy_duck/France/161104e/2016 982 EPI869690 NS A/decoy_duck/France/161104e/2016 835 EPI869691 Submitter information Submitter: Briand, Francois-Xavier Submission Date: 2016-12-26 Last modifier: Briand, Francois-Xavier Last modified: 2016-12-27 Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France

Moreover, whether in Muggensturm (Kreis Rastatt ) with a mallard, a likewise highly pathogenic - ie strong sickening - virus type H5 was detected. "However, it is not H5N8, but a different subtype of the virus," the ministry said. In order to clarify the case, contact the National Reference Laboratory at the Friedrich-Loeffler-Institut (FLI) at the Ostseeinsel Riems. http://www.schwaebische.de/region_artikel,-Jetzt-auch-Ulm-Vogelgrippe-breitet-sich-aus-_arid,10587811_toid,351.html

New cases of avian influenza in wild birds in Ulm and in the district of Rastatt / further positive findings in the district of Emmendingen / compliance with stabling requirements and supplementary measures on biosecurity still essential According to the Ministry of Rural Affairs and Consumer Protection on Tuesday (27 December), the bird flu virus H5N8 was detected in a swan at the weekend. A highly pathogenic (highly pathogenic) avian influenza virus of the H5 type was also detected in a fallen Stockente in Muggensturm (Landkreis Rastatt). However, it is not H5N8, but another subtype of the virus. For further clarification of this case the Ministry is in close consultation with the Friedrich-Loeffler-Institut. As soon as a finding is available, it is notified. Also in the district of Emmendingen (Rheinhausen) a buzzard was positively tested for avian influenza. Due to the country-wide stabling requirement for farmed poultry and the imposed biosecurity measures for poultry farmers, the necessary protective measures have already been taken on the spot. The bird flu is still restricted to wild birds in the country. Poultry has not yet been affected. The highly pathogenic avian influenza virus has been confirmed in 299 wild birds in Baden-Württemberg. The counties Bodenseekreis, Constance, Ravensburg, Emmendingen, Sigmaringen and now Ulm and Rastatt are affected. The Ministry points to the necessity of strict compliance with stabling requirements and other biosafety measures due to the still acute occurrence in the country and the increased outbreaks in poultry holdings in northern Germany. Under www.mlr.baden-wuerttemberg.de/de/vogelgrippe you will find comprehensive information on the current bird flu Done.

A highly pathogenic (highly pathogenic) avian influenza virus of the H5 type was also detected in a fallen Stockente in Muggensturm (Landkreis Rastatt). However, it is not H5N8, but another subtype of the virus. For further clarification of this case the Ministry is in close consultation with the Friedrich-Loeffler-Institut. As soon as a finding is available, it is notified. https://mlr.baden-wuerttemberg.de/de/unser-service/presse-und-oeffentlichkeitsarbeit/pressemitteilung/pid/neue-faelle-von-vogelgrippe-bei-wildvoegeln-in-ulm-und-im-landkreis-rastatt-weiterer-positiver-bef/

Descriptions Align Segment-ID Name Score E-Value Identity EPI869683 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 817/820 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 817/820 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1491.4 0.000000e+00 816/823 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1484.0 0.000000e+00 814/820 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 811/822 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 815/830 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1445.2 0.000000e+00 809/822 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 809/824 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 813/831 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1428.6 0.000000e+00 806/822 (98%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1428.6 0.000000e+00 806/822 (98%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 805/821 (98%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 805/821 (98%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1423.0 0.000000e+00 806/823 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 806/824 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1421.2 0.000000e+00 804/821 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 804/822 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 804/822 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1402.7 0.000000e+00 806/829 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 800/821 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 799/821 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1382.4 0.000000e+00 799/824 (96%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1382.4 0.000000e+00 799/824 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1380.6 0.000000e+00 802/829 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1380.6 0.000000e+00 802/829 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1380.6 0.000000e+00 802/829 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI869680 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2748.9 0.000000e+00 1494/1497 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2632.6 0.000000e+00 1473/1497 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1462/1498 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1462/1498 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2555.0 0.000000e+00 1461/1499 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2553.2 0.000000e+00 1452/1487 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2523.6 0.000000e+00 1434/1468 (97%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2521.8 0.000000e+00 1455/1499 (97%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1436/1474 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1436/1474 (97%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI372284 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2505.2 0.000000e+00 1451/1498 (96%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2501.5 0.000000e+00 1416/1447 (97%) EPI618918 A/mallard/Sweden/51933/2006 (A/H10N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618770 A/mallard/Sweden/52903/2006 (A/H10N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618520 A/mallard/Sweden/7146/2004 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618010 A/mallard/Republic of Georgia/4/2010 (A/H1N1) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI514024 A/mallard/Sweden/68571/2007 (A/H4N6) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI514010 A/mallard/Sweden/68551/2007 (A/H4N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI514001 A/mallard/Sweden/68940/2007 (A/H4N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI513973 A/mallard/Sweden/68761/2007 (A/H4N6) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI513966 A/mallard/Sweden/68677/2007 (A/H0) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI377603 A/mallard/Sweden/68597/2007 (A/H2N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI377595 A/mallard/Sweden/68735/2007 (A/H2N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI222072 A/gadwall/Altai/1326/2007 (A/H3N8) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI222056 A/gadwall/Altai/1324/2007 (A/H3N8) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI190327 A/mallard/Netherlands/29/2006 (A/H7N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI140249 A/migratory duck/Hong Kong/MP2437/2003 (A/H6N1) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI69241 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2495.9 0.000000e+00 1448/1497 (96%) EPI618660 A/mallard/Sweden/101111/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618535 A/mallard/Sweden/50980/2006 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618493 A/mallard/Sweden/2321/2004 (A/H0) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618484 A/mallard/Sweden/100832/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618470 A/mallard/Sweden/101120/2009 (A/H2N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618460 A/mallard/Sweden/101082/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618446 A/mallard/Sweden/101163/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618431 A/mallard/Sweden/102103/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618355 A/mallard/Sweden/100760/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618348 A/mallard/Sweden/100687/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618336 A/mallard/Sweden/100740/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618322 A/mallard/Sweden/100791/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI617111 A/mallard/Sweden/80329/2008 (A/H11N5) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI514031 A/mallard/Sweden/68575/2007 (A/H4N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI513987 A/mallard/Sweden/68893/2007 (A/H4N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI513980 A/mallard/Sweden/68836/2007 (A/H4N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%)

Align Segment-ID Name Score E-Value Identity EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1543.1 0.000000e+00 835/835 (100%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 833/835 (99%) EPI869683 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1526.5 0.000000e+00 832/835 (99%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1519.1 0.000000e+00 829/835 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1517.2 0.000000e+00 830/835 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 826/835 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 825/835 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 826/836 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 826/836 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1476.6 0.000000e+00 824/836 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 824/836 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 824/836 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 823/836 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 822/836 (98%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 821/836 (98%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1460.0 0.000000e+00 821/836 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 821/837 (98%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 820/836 (98%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 820/836 (98%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 820/836 (98%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 821/837 (98%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 818/836 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1443.4 0.000000e+00 818/836 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 814/836 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 813/836 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 813/836 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1410.1 0.000000e+00 812/836 (97%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1410.1 0.000000e+00 812/836 (97%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%)

Align Segment-ID Name Score E-Value Identity EPI869688 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2699.1 0.000000e+00 1463/1463 (100%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2654.8 0.000000e+00 1454/1463 (99%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2643.7 0.000000e+00 1452/1463 (99%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2527.3 0.000000e+00 1431/1463 (97%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2527.3 0.000000e+00 1431/1463 (97%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2521.8 0.000000e+00 1430/1463 (97%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2510.7 0.000000e+00 1428/1463 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1425/1463 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2481.2 0.000000e+00 1412/1447 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2471.9 0.000000e+00 1421/1463 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2471.9 0.000000e+00 1421/1463 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2471.9 0.000000e+00 1421/1463 (97%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2466.4 0.000000e+00 1420/1463 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2466.4 0.000000e+00 1420/1463 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2460.9 0.000000e+00 1420/1464 (96%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI869680 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2449.8 0.000000e+00 1417/1463 (96%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2449.8 0.000000e+00 1418/1464 (96%) EPI816848 A/turkey/Poland/09/2014 (A/H9N2) segment 5 (NP) 2449.8 0.000000e+00 1409/1451 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2444.2 0.000000e+00 1417/1464 (96%) EPI463226 A/mallard/Sweden/100580/2009 (A/H6N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI463224 A/mallard/Sweden/100559/2009 (A/H6N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI463221 A/mallard/Sweden/100537/2009 (A/H6N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI484288 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2440.5 0.000000e+00 1398/1437 (97%) EPI816840 A/turkey/Poland/08/2014 (A/H9N2) segment 5 (NP) 2435.0 0.000000e+00 1399/1440 (97%) EPI463229 A/mallard/Sweden/100633/2009 (A/H6N2) segment 5 (NP) 2433.2 0.000000e+00 1414/1463 (96%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2427.6 0.000000e+00 1414/1464 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2427.6 0.000000e+00 1414/1464 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2423.9 0.000000e+00 1397/1440 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2423.9 0.000000e+00 1397/1440 (97%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2422.1 0.000000e+00 1412/1463 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2422.1 0.000000e+00 1412/1463 (96%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2416.5 0.000000e+00 1411/1463 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2411.0 0.000000e+00 1411/1464 (96%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2411.0 0.000000e+00 1410/1463 (96%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2411.0 0.000000e+00 1410/1463 (96%) EPI102231 A/duck/Taiwan/WB29/99 (A/H6N1) segment 5 (NP) 2411.0 0.000000e+00 1411/1464 (96%) EPI618666 A/mallard/Sweden/2213/2003 (A/H12N5) segment 5 (NP) 2405.5 0.000000e+00 1409/1463 (96%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2405.5 0.000000e+00 1409/1463 (96%) EPI332954 A/Anas_platyrhynchos/Camargue/091863/09 (A/H10N7) segment 5 (NP) 2405.5 0.000000e+00 1410/1464 (96%) EPI251817 A/mallard/Sweden/86/2003 (A/H12N5) segment 5 (NP) 2405.5 0.000000e+00 1409/1463 (96%) EPI118136 A/mallard/Italy/36/2002 (A/H5N3) segment 5 (NP) 2405.5 0.000000e+00 1410/1464 (96%) EPI102229 A/chicken/Taiwan/165/99 (A/H6N1) segment 5 (NP) 2405.5 0.000000e+00 1410/1464 (96%) EPI433356 A/mallard/Czech Republic/15902-12K/2009 (A/H11N2) segment 5 (NP) 2399.9 0.000000e+00 1408/1463 (96%) EPI314216 A/wild duck/Taiwan/WB147/2001 (A/H4N6) segment 5 (NP) 2399.9 0.000000e+00 1409/1464 (96%) EPI471123 A/chicken/Iran/ZMT-101/1998 (A/H9N2) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI463238 A/mallard/Sweden/101288/2009 (A/H5N3) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI377571 A/mallard/Sweden/88/2005 (A/H0) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI251662 A/mallard/Netherlands/2/1999 (A/H3N5) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI182108 A/mallard/Netherlands/11/2007 (A/H6N5) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI618770 A/mallard/Sweden/52903/2006 (A/H10N9) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI618589 A/mallard/Sweden/3328/2003 (A/H12N5) segment 5 (NP) 2388.8 0.000000e+00 1407/1464 (96%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI618101 A/mallard/Sweden/396/2002 (A/H10N4) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI463241 A/mallard/Sweden/101368/2009 (A/H4N6) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2388.8 0.000000e+00 1407/1464 (96%) EPI89042 A/Pigeon/Nanchang/8-142/2000 (A/H3N6) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI69241 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2385.1 0.000000e+00 1405/1463 (96%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2383.3 0.000000e+00 1405/1463 (96%)

Align Segment-ID Name Score E-Value Identity EPI869686 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI868847 A/turkey/England/052131/2016 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3941.9 0.000000e+00 2145/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3938.2 0.000000e+00 2144/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3938.2 0.000000e+00 2144/2151 (99%) EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3930.8 0.000000e+00 2142/2151 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3661.2 0.000000e+00 2079/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3646.4 0.000000e+00 2095/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3635.3 0.000000e+00 2092/2153 (97%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3635.3 0.000000e+00 2071/2122 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3635.3 0.000000e+00 2090/2151 (97%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3633.5 0.000000e+00 2070/2121 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3618.7 0.000000e+00 2087/2151 (97%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3607.6 0.000000e+00 2085/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3607.6 0.000000e+00 2085/2151 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3602.1 0.000000e+00 2066/2124 (97%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3594.7 0.000000e+00 2066/2126 (97%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3592.9 0.000000e+00 2051/2103 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3591.0 0.000000e+00 2083/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3591.0 0.000000e+00 2083/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3585.5 0.000000e+00 2083/2153 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3574.4 0.000000e+00 2081/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3574.4 0.000000e+00 2081/2153 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3568.8 0.000000e+00 2078/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3557.8 0.000000e+00 2077/2152 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3552.2 0.000000e+00 2076/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3546.7 0.000000e+00 2076/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI372287 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI823764 A/environment/Kamchatka/23/2016 (A/H13N8) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI704543 A/duck/Mongolia/742/2015 (A/H10N7) segment 3 (PA) 3541.1 0.000000e+00 2075/2153 (96%) EPI704421 A/duck/Mongolia/655/2015 (A/H2N3) segment 3 (PA) 3541.1 0.000000e+00 2075/2153 (96%) EPI296486 A/mallard/Netherlands/28/2006 (A/H3N1) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI222163 A/mallard/Altai/1208/2007 (A/H3N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI222094 A/garganey/Altai/1216/2007 (A/H3N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI704388 A/duck/Mongolia/482/2015 (A/H2N3) segment 3 (PA) 3535.6 0.000000e+00 2074/2153 (96%) EPI372351 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI613953 A/mallard/Sweden/101993/2009 (A/H2N9) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI598732 A/duck/Jiangxi/32180/2013 (A/H0) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI598348 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI511172 A/mallard/Sweden/52299/2006 (A/H4N6) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI234643 A/duck/Beijing/40/04 (A/H3N8) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI232397 A/duck/Beijing/61/05 (A/H3N8) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI181966 A/mallard/Netherlands/2/2005 (A/H4N2) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI613943 A/mallard/Sweden/4932/2004 (A/H9N2) segment 3 (PA) 3519.0 0.000000e+00 2069/2151 (96%) EPI598766 A/duck/Jiangxi/5423/2014 (A/H0) segment 3 (PA) 3519.0 0.000000e+00 2070/2152 (96%) EPI598764 A/duck/Jiangxi/34864/2013 (A/H0) segment 3 (PA) 3519.0 0.000000e+00 2070/2152 (96%) EPI591116 A/duck/Jiangxi/5418/2014 (A/H0) segment 3 (PA) 3519.0 0.000000e+00 2070/2152 (96%) EPI372327 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 3 (PA) 3519.0 0.000000e+00 2069/2151 (96%) EPI296254 A/wild duck/Korea/HDR02/2005 (A/H1N1) segment 3 (PA) 3513.4 0.000000e+00 2068/2151 (96%)

Align Segment-ID Name Score E-Value Identity EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4152.4 0.000000e+00 2265/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4146.8 0.000000e+00 2264/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4132.1 0.000000e+00 2261/2274 (99%) EPI869677 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2260/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2259/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2260/2274 (99%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4119.1 0.000000e+00 2257/2271 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4097.0 0.000000e+00 2255/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2255/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4074.8 0.000000e+00 2251/2274 (98%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4074.8 0.000000e+00 2251/2274 (98%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2245/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3897.6 0.000000e+00 2220/2275 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3892.0 0.000000e+00 2219/2275 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3869.9 0.000000e+00 2216/2276 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3869.9 0.000000e+00 2215/2275 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3864.3 0.000000e+00 2214/2275 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2214/2276 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3847.7 0.000000e+00 2211/2275 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3836.6 0.000000e+00 2207/2272 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3836.6 0.000000e+00 2209/2275 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2209/2276 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3831.1 0.000000e+00 2209/2276 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3820.0 0.000000e+00 2205/2274 (96%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3820.0 0.000000e+00 2205/2274 (96%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3814.5 0.000000e+00 2205/2275 (96%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3812.6 0.000000e+00 2193/2258 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3808.9 0.000000e+00 2205/2276 (96%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3808.9 0.000000e+00 2204/2275 (96%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3808.9 0.000000e+00 2205/2276 (96%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3803.4 0.000000e+00 2204/2276 (96%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%)

Align Segment-ID Name Score E-Value Identity EPI869684 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI868845 A/turkey/England/052131/2016 (A/H5N8) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4135.8 0.000000e+00 2266/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3956.6 0.000000e+00 2235/2281 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3940.0 0.000000e+00 2232/2281 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3934.5 0.000000e+00 2231/2281 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3934.5 0.000000e+00 2231/2281 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3928.9 0.000000e+00 2230/2281 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3906.8 0.000000e+00 2226/2281 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3890.2 0.000000e+00 2223/2281 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3884.6 0.000000e+00 2222/2281 (97%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 3879.1 0.000000e+00 2221/2281 (97%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3856.9 0.000000e+00 2218/2282 (97%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3851.4 0.000000e+00 2217/2282 (97%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2216/2282 (97%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 3829.2 0.000000e+00 2212/2281 (96%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3818.1 0.000000e+00 2211/2282 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3812.6 0.000000e+00 2209/2281 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3796.0 0.000000e+00 2208/2283 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3790.4 0.000000e+00 2206/2282 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3784.9 0.000000e+00 2206/2283 (96%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3784.9 0.000000e+00 2205/2282 (96%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3784.9 0.000000e+00 2206/2283 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3779.4 0.000000e+00 2204/2282 (96%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2202/2283 (96%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%

Align Segment-ID Name Score E-Value Identity EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI869682 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1779.4 0.000000e+00 973/978 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1703.7 0.000000e+00 963/983 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1689.0 0.000000e+00 960/983 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%)

Align Segment-ID Name Score E-Value Identity EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI869681 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2555.0 0.000000e+00 1398/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2503.3 0.000000e+00 1390/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2470.1 0.000000e+00 1385/1408 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1383/1408 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2436.9 0.000000e+00 1379/1408 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1377/1408 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2420.2 0.000000e+00 1376/1408 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1376/1409 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1374/1408 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1374/1408 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1375/1409 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1371/1408 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1372/1409 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2390.7 0.000000e+00 1352/1380 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1370/1408 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1370/1408 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1370/1409 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1368/1408 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1359/1400 (97%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1353/1395 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1354/1397 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1361/1409 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1359/1408 (96%)

Align Segment-ID Name Score E-Value Identity EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3144.1 0.000000e+00 1704/1704 (100%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3122.0 0.000000e+00 1699/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3110.9 0.000000e+00 1697/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3105.3 0.000000e+00 1696/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI869679 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1693/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1693/1705 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1687/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1688/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1687/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2977.9 0.000000e+00 1673/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2977.9 0.000000e+00 1673/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2966.8 0.000000e+00 1671/1704 (98%) EPI675774 A/duck/Liaoning/S1001/2014 (A/H5N8) segment 4 (HA) 2966.8 0.000000e+00 1671/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1669/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2944.7 0.000000e+00 1668/1705 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1602/1609 (99%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1666/1705 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1666/1705 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2928.1 0.000000e+00 1665/1705 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1664/1705 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1664/1706 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1663/1705 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1664/1706 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1663/1705 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1662/1706 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1661/1705 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1661/1705 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2900.4 0.000000e+00 1660/1705 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2896.7 0.000000e+00 1658/1703 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2894.8 0.000000e+00 1660/1706 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2889.3 0.000000e+00 1658/1705 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2889.3 0.000000e+00 1658/1705 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2883.7 0.000000e+00 1658/1706 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2878.2 0.000000e+00 1656/1705 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2872.7 0.000000e+00 1655/1705 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2872.7 0.000000e+00 1656/1706 (97%)

Descriptions Align Segment-ID Name Score E-Value Identity EPI869678 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2140/2148 (99%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3834.8 0.000000e+00 2126/2151 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3790.4 0.000000e+00 2119/2152 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3735.0 0.000000e+00 2110/2153 (98%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3696.3 0.000000e+00 2102/2152 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3629.8 0.000000e+00 2089/2151 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3579.9 0.000000e+00 2080/2151 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3568.8 0.000000e+00 2078/2151 (96%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI749127 A/environment/Chongqing/02412/2012 (A/H5N1) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3552.2 0.000000e+00 2076/2152 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI345928 A/whistling swan/Shimane/580/2002 (A/H5N3) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%)