niman

Investigating 41 cases of microcephaly in babies zikaThe National Institute of Health recorded 58,838 cases of the virus in the country, including 10,812 pregnant.Colprensa Zika virus tiger mosquito microcephaly tropical diseases Congenital malformations mosquitos genetic diseases Pregnancy neurological diseases insects Reproduction Epidemic Diseases Animals Medicine Fauna Genetics Health Species Environment biology Natural Sciences ScienceRecommend on Facebook15Tweet0Send aGoogle PlusSend to LinkedinPin ItSubmitPrintReport errorAssessinterestingoutrageousfunnycontroversysurprisingboringCaracol Radio26/03/2016 - 17:17Microcephaly cases have exceeded the usual average for this date and have identified different causes of their appearance. However the National Institute of Health, explained that the figure may vary by entities notified belatedly. To date the Institute recorded 50 cases that would be associated with zika, which were discarded 9 and 41 are maintained in research to determine if the virus is the cause of the disease. Also increased the reporting of other neurological syndromes associated with the virus , if 381 cases of Guillain Barre syndrome, polyneuropathy and other complications are analyzed, they are related to the zika. The number of Colombians with the virus rose to 58,838 , including 10,812 pregnant women, cases that are within government projections. http://caracol.com.co/radio/2016/03/26/salud/1459009027_214389.html

Investigating whether 41 cases of microcephaly are related to the Zika The National Institute of Health (NIH) is investigating whether 41 cases of microcephaly in newborns related to Zika virus , which so far has infected a total of 58,838 people. According to the latest bulletin of the INS until the eleventh week of the year 50 cases of microcephaly are recorded in newborns, nine of which have been negative for zika ". The Institute, which warned that the number of cases may vary "because of the late notification of the event", said that compared with the historical monthly average of microcephaly in the country "a cumulative total of 30 cases at the same time be expected". With regard to Guillain Barré, polyneuropathy and other complications associated with zika syndrome, have been reported to the surveillance system 381 cases "with a history of febrile illness consistent with infection" by the virus. According to government estimates, 500 babies may be born with microcephaly in the country by zika and a similar number of people may experience Guillain Barre syndrome, before suggesting a resolution to couples "not pregnant" during the expansion phase virus. With respect to the total number infected, the INS updated the figure to 58,838 people, of whom 10,812 are pregnant women. Virus Zika, transmitted by a mosquito of the genus Aedes, the same one that causes dengue and chikungunya, can cause fever, red eyes without discharge without itching, rash with white or red spots and less frequently muscle and joint pain . EFE http://cmi.com.co/investigan-si-41-casos-de-microcefalia-tienen-relacion-con-el-zika

Colombia investigates whether 41 cases of microcephaly are related to the zika «PREVIOUS ARTICLEcontinues the operation to" annihilate "the jihadist network in Brussels By EFE customers [@] efe.es March 26, 2016 Be the first to comment emailPrint The Institute, which warned that the number of cases may vary "because of the late notification of the event".external source.Bogota. - The National Institute of Health (INS) of Colombia is investigating whether 41 cases of microcephaly in newborns related to Zika virus, which so far has infected a total of 58,838 people.According to the latest bulletin of the INS until the eleventh week of the year 50 cases of microcephaly are recorded in newborns, nine of which have been negative for zika. ✕the Institute, which warned that the number of cases may vary "because of the late notification of the event", said that compared with the historical monthly average of microcephaly in the country "a cumulative total of 30 cases at the same time be expected". With regard to Guillain Barré, polyneuropathy and other complications associated with zika syndrome, have been reported to the surveillance system 381 cases "with a history of febrile illness consistent with infection" by the virus. According to estimates by the Colombian Government, 500 babies may be born with microcephaly in the country by zika and a similar number of people may experience Guillain Barre syndrome, before suggesting a resolution to couples "not pregnant" during the expansion phase virus. With respect to the total number infected, the INS updated the figure to 58,838 people, of whom 10,812 are pregnant women. Zika virus, transmitted by a mosquito Aedes genus, the same one that causes chikungunya and dengue, can cause fever, red eyes without discharge without itching, rash with white or red spots and less frequently pain m http://hoy.com.do/colombia-investiga-si-41-casos-de-microcefalia-tienen-relacion-con-el-zika/?utm_source=twitterfeed&utm_medium=twitter

Sequence map update https://www.google.com/maps/d/u/0/edit?mid=zv94AJqgUct4.kI8kcFySb4J0&hl=en

Sequence map updated https://www.google.com/maps/d/u/0/edit?mid=zv94AJqgUct4.kI8kcFySb4J0&hl=en

Zika sequence map update https://www.google.com/maps/d/u/0/edit?mid=zv94AJqgUct4.kI8kcFySb4J0&hl=en

Sequences producing significant alignments:Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KU954085.1|Zika virus isolate ZIKCOLSC67 polyprotein gene, partial cds434434100%5e-118100%KU954085.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome43043099%6e-117100%KU922923.1Select seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome42542599%3e-11599%KU870645.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome42542599%3e-11599%KU926310.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome42542599%3e-11599%KU922960.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds42542599%3e-11599%KU820898.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds42542599%3e-11599%KU740184.2Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome42542599%3e-11599%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome42542599%3e-11599%KU853012.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds42542599%3e-11599%KU729218.1Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds42542599%3e-11599%KU761564.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome42542599%3e-11599%KU527068.1Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds42542599%3e-11599%KU686218.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds42542599%3e-11599%KU647676.1Select seq gb|KU509998.1|Zika virus strain Haiti/1225/2014, complete genome42542599%3e-11599%KU509998.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome42542599%3e-11599%KU501215.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds42542599%3e-11599%KU365778.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds42542599%3e-11599%KU312314.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds42542599%3e-11599%KU312313.1Select seq dbj|AB908162.1|Zika virus gene for polyprotein, partial cds, strain: ZIKV Hu/Tahiti/01u/2014NIID42542599%3e-11599%AB908162.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds42142199%3e-11499%KU955590.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds42142199%3e-11499%KU955589.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome42142199%3e-11499%KU926309.1Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds42142199%3e-11499%KU866423.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome42142199%3e-11499%KU820899.2Select seq gb|KU820897.1|Zika virus isolate FLR polyprotein gene, complete cds42142199%3e-11499%KU820897.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome42142199%3e-11499%KU744693.1Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome42142199%3e-11499%KU497555.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome42142199%3e-11499%KU707826.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds42142199%3e-11499%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds42142199%3e-11499%KU501216.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds42142199%3e-11499%KU365780.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds42142199%3e-11499%KU365779.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds42142199%3e-11499%KU365777.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds42142199%3e-11499%KU312312.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome42142199%3e-11499%KU321639.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds42142199%3e-11499%KJ776791.1Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome41641699%1e-11299%KU955593.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome41641699%1e-11299%KU681081.3Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds41641699%1e-11299%JN860885.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds41241299%2e-11198%KU729217.2Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome41241299%2e-11198%KU681082.3Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds41241299%2e-11198%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds40740799%7e-11098%EU545988.1Select seq gb|KM212966.1|Zika virus isolate NC13(FP)-26112013-22072 glycoprotein gene, partial cds40540594%2e-10999%KM212966.1Select seq gb|KM212965.1|Zika virus isolate NC13(FP)-20112013-22015 glycoprotein gene, partial cds40140194%3e-10899%KM212965.1Select seq gb|KM212964.1|Zika virus isolate NC14-17042014-4554 glycoprotein gene, partial cds40140194%3e-10899%KM212964.1Select seq gb|KM212963.1|Zika virus isolate NC14-23012014-250 glycoprotein gene, partial cds40140194%3e-10899%KM212963.1Select seq gb|KU844090.1|Zika virus isolate Moscow-2016 polyprotein gene, partial cds39239291%1e-10599%KU844090.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds39239291%1e-10599%KU312315.1Select seq gb|KJ579441.1|Zika virus isolate PF13-CP221013c polyprotein gene, partial cds39239291%1e-10599%KJ579441.1Select seq gb|KJ680134.1|Zika virus strain PF13-091213-121 polyprotein gene, partial cds38938991%2e-10499%KJ680134.1Select seq gb|KU926326.1|Zika virus isolate Zika 2235 Israel ex Colombia 2015 polyprotein gene, partial cds37437486%4e-100100%KU926326.1Select seq gb|KU926325.1|Zika virus isolate Zika 356 Israel ex Mexico 2016 polyprotein gene, partial cds37437486%4e-100100%KU926325.1Select seq gb|KU926324.1|Zika virus isolate Zika 352 Israel ex Vietnam 2016 polyprotein gene, partial cds37437486%4e-100100%KU926324.1Select seq gb|KU926323.1|Zika virus isolate Zika 269 Israel ex Colombia 2016 polyprotein gene, partial cds37437486%4e-100100%KU926323.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds37437486%4e-100100%KU646828.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds36936986%2e-9899%KU646827.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds36936986%2e-9899%KJ634273.1Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds35835899%3e-9593%HQ234499.1Select seq gb|KT381874.1|Zika virus strain Zika1697_BR-RJ/2015 envelope protein gene, partial cds35135184%5e-9399%KT381874.1

LOCUS KU954085 240 bp ss-RNA linear VRL 23-MAR-2016 DEFINITION Zika virus isolate ZIKCOLSC67 polyprotein gene, partial cds. ACCESSION KU954085 VERSION KU954085.1 GI:1008913385 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 240) AUTHORS Calvo,E.P. and Castellanos,J.E. TITLE Dengue, chikungunya and Zika co-infection in a pregnant woman from Colombia JOURNAL Unpublished REFERENCE 2 (bases 1 to 240) AUTHORS Calvo,E.P. and Castellanos,J.E. TITLE Direct Submission JOURNAL Submitted (22-MAR-2016) Universidad el Bosque, Av. Cra 9 No. 131 A - 02 Edificio D, Bogota, Distrito Capital de Bogota 11001000, Colombia COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..240 /organism="Zika virus" /mol_type="genomic RNA" /isolate="ZIKCOLSC67" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:64320" /country="Colombia" /collection_date="Feb-2016" CDS <1..>240 /codon_start=2 /product="polyprotein" /protein_id="AMR39829.1" /db_xref="GI:1008913386" /translation="MILLIALAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVM AQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMAR" ORIGIN 1 catgatactg ctgattgccc tggcatacag catcaggtgc ataggagtca gcaataggga 61 ctttgtggaa ggtatgtcag gtgggacttg ggttgatgtt gtcttggaac atggaggttg 121 tgtcaccgta atggcacagg acaaaccgac tgtcgacata gagctggtta caacaacagt 181 cagcaacatg gcggaggtaa gatcctactg ctatgaggca tcaatatcag acatggctcg

Universidad el Bosque has released a partial Zika sequence, ZIKCOLSC67, from Colombia pregnant case co-infected with Dengue and chikinguya (collection Feb 2016).

https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=zv94AJqgUct4.kT4qLMXp3SLU StateCDCStates StatesStatesStatesStatesCDCStatesStatesStatesStatesStatesCDCStatesStates 9-Mar10-Mar11-Mar14-Mar15-Mar16-Mar16-Mar17-Mar18-Mar21-Mar22-Mar23-Mar23-Mar24-Mar25-MarAL112333133333233AR111111111111111CA131416161616131617171717171722CO222222222222222CT000000001111111DE111111111333333DC333333333333333FL495859606262596667717272707375GA577777777777777HI566666566777577IL777777777999999IN333333444444444IA334444444444444KS001111111111111KY011111111222222LA222222222222222MD444444555555555MA333333333333333ME011111011111011MI233333233333233MN666666777777999MO111111111111111MS000000000000012MT111111111111111NC556666666666779NE222222222222222NH111122222222222NJ222222222222222NM000000001111011NV000000000000011NY254040404049424949494953435353OH667888888888888OK233333333333333OR599910106101010101061010PA666888888888888TN111111111111111TX192626262626342626272828232828UT011111011111011VA666666777777777WA133333233333233WV011111555555555 193240248253257266258278282293295299273305315

DescriptionsSequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds1844718447100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds1844718447100%0.099%KU761564.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds1843818438100%0.099%KU820898.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome1839018390100%0.099%KU707826.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds1839018390100%0.099%KU365779.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds1837518375100%0.099%KU365780.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds1837518375100%0.099%KU365778.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds1837518375100%0.099%KU312312.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds1837218372100%0.099%KU365777.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome1836618366100%0.099%KU501215.1Select seq gb|KU509998.1|Zika virus strain Haiti/1225/2014, complete genome1835718357100%0.099%KU509998.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds1835418354100%0.099%KJ776791.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome1834518345100%0.099%KU321639.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds1833618336100%0.099%KU729218.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome1833018330100%0.099%KU926309.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds1832118321100%0.099%KU501217.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds1831818318100%0.099%KU729217.2Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome183181831899%0.099%KU497555.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds1831818318100%0.099%KU647676.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds1831818318100%0.099%KU501216.1Select seq gb|KU820897.1|Zika virus isolate FLR polyprotein gene, complete cds1831218312100%0.099%KU820897.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome1830918309100%0.099%KU527068.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome1830018300100%0.099%KU922960.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome1829418294100%0.099%KU926310.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome1829418294100%0.099%KU922923.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome1828518285100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome1828518285100%0.099%KU853012.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome1824918249100%0.099%KU820899.2Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome1814618146100%0.099%KU744693.1Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds1814118141100%0.099%KU866423.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome1801118011100%0.099%KU681081.3Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds177031770399%0.098%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds176581765898%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds1754917549100%0.098%EU545988.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1741117411100%0.098%KU681082.3Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds163971639799%0.095%HQ234499.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1330813308100%0.089%KU720415.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1330213302100%0.089%KF268949.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds133021330299%0.089%HQ234498.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1329713297100%0.089%KF383115.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1328613286100%0.089%LC002520.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1328413284100%0.089%KF268948.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1328113281100%0.089%KF383119.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1327913279100%0.089%DQ859059.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1327713277100%0.089%KF268950.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1324813248100%0.089%KF383116.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1322713227100%0.089%AY632535.2Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds132231322399%0.089%HQ234501.1Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1318713187100%0.088%KF383117.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds131621316299%0.088%HQ234500.1Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1296713035100%0.088%KF383118.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds128791287997%0.089%KF383121.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence108901089097%0.084%KF383120.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds4985498527%0.099%KU312314.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds4958495827%0.099%KU312313.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds4641464125%0.099%KU646828.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds4632463225%0.099%KU646827.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds3443344318%0.099%KU312315.1Select seq gb|KU740199.1|Zika virus isolate VE_Ganxian2016 polyprotein gene, partial cds3232323217%0.099%KU740199.1Select seq gb|DQ859064.1|Spondweni virus strain SM-6 V-1 polyprotein gene, complete cds2879421595%0.071%DQ859064.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds2682268214%0.099%KJ634273.1Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds2051205111%0.099%KU686218.1Select seq gb|KU179098.1|Zika virus isolate JMB-185 nonstructural protein 5 gene, partial cds2008200811%0.099%KU179098.1Select seq gb|KM078936.1|Zika virus strain CHI1410214 NS5 protein gene, partial cds173717379%0.099%KM078936.1Select seq gb|KM078961.1|Zika virus strain CHI2612114 NS5 protein gene, partial cds173617369%0.099%KM078961.1Select seq gb|KM078930.1|Zika virus strain CHI2283714 NS5 protein gene, partial cds173417349%0.099%KM078930.1Select seq gb|KM078971.1|Zika virus strain CHI2613014 NS5 protein gene, partial cds173017309%0.099%KM078971.1Select seq gb|KM078970.1|Zika virus strain CHI2490414 NS5 protein gene, partial cds173017309%0.099%KM078970.1Select seq gb|KM078933.1|Zika virus strain CHI1058514 NS5 protein gene, partial cds173017309%0.099%KM078933.1Select seq gb|KM078929.1|Zika virus strain CHI1805214 NS5 protein gene, partial cds172817289%0.099%KM078929.1Select seq gb|KJ873160.1|Zika virus isolate NC14-03042014-3481 nonstructural protein 5 gene, partial cds159315938%0.099%KJ873160.1Select seq gb|KJ873161.1|Zika virus isolate NC14-02042014-3220 nonstructural protein 5 gene, partial cds141114117%0.099%KJ873161.1Select seq gb|KM851039.1|Zika virus strain SV0127/14 nonstructural protein 5 gene, partial cds137913797%0.099%KM851039.1Select seq gb|KM851038.1|Zika virus strain CPC-0740 nonstructural protein 5 gene, partial cds134213427%0.098%KM851038.1Select seq gb|KU556802.1|Zika virus isolate MEX/InDRE/14/2015 NS5 protein gene, partial cds133713377%0.099%KU556802.1Select seq gb|AF013415.1|Zika virus strain MR-766 NS5 protein (NS5) gene, partial cds1315131510%0.088%AF013415.1Select seq gb|KT200609.1|Zika virus isolate BR/949/15 NS5 gene, partial cds124012406%0.099%KT200609.1Select seq gb|KU232300.1|Zika virus isolate 067ZV_PEBR15 NS5 protein gene, partial cds123112316%0.099%KU232300.1Select seq gb|KU232290.1|Zika virus isolate 036ZV_PEBR15 NS5 protein gene, partial cds123112316%0.099%KU232290.1Select seq gb|KU232297.1|Zika virus isolate 049ZV_PEBR15 NS5 protein gene, partial cds122912296%0.099%KU232297.1Select seq gb|KU232294.1|Zika virus isolate 061ZV_PEBR15 NS5 protein gene, partial cds121612166%0.099%KU232294.1Select seq gb|KU232298.1|Zika virus isolate 050ZV_PEBR15 NS5 protein gene, partial cds121412146%0.099%KU232298.1Select seq gb|KU232292.1|Zika virus isolate 054ZV_PEBR15 NS5 protein gene, partial cds121312136%0.099%KU232292.1Select seq gb|KU232296.1|Zika virus isolate 045ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232296.1Select seq gb|KU232293.1|Zika virus isolate 057ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232293.1Select seq gb|KU232295.1|Zika virus isolate 068ZV_PEBR15 NS5 protein gene, partial cds120412046%0.099%KU232295.1Select seq gb|KU232288.1|Zika virus isolate 001ZV_PEBR15 NS5 protein gene, partial cds119111916%0.099%KU232288.1Select seq gb|KU232289.1|Zika virus isolate 020ZV_PEBR15 NS5 protein gene, partial cds118711876%0.099%KU232289.1Select seq gb|KU232299.1|Zika virus isolate 015ZV_PEBR15 NS5 protein gene, partial cds118411846%0.099%KU232299.1Select seq gb|KU232291.1|Zika virus isolate 051ZV_PEBR15 NS5 protein gene, partial cds118011806%0.099%KU232291.1Select seq gb|KU758878.1|Zika virus polyprotein gene, partial cds113911396%0.099%KU758878.1

Sequences producing significant alignments:Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome1851618516100%0.099%KU820899.2Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds1839018390100%0.099%KU866423.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds1839018390100%0.099%KJ776791.1Select seq gb|KU509998.1|Zika virus strain Haiti/1225/2014, complete genome1834518345100%0.099%KU509998.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome1832118321100%0.099%KU321639.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds1831218312100%0.099%KU729218.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome1831218312100%0.099%KU707826.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds1831218312100%0.099%KU365779.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome1830018300100%0.099%KU926309.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds1830018300100%0.099%KU501217.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds1830018300100%0.099%KU365780.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds1829418294100%0.099%KU647676.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds1829418294100%0.099%KU501216.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds1829418294100%0.099%KU365777.1Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome182871828799%0.099%KU497555.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds1828518285100%0.099%KU729217.2Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome1828518285100%0.099%KU527068.1Select seq gb|KU820897.1|Zika virus isolate FLR polyprotein gene, complete cds1828218282100%0.099%KU820897.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds1828218282100%0.099%KU365778.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds1828218282100%0.099%KU312312.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome1827618276100%0.099%KU922960.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome1827318273100%0.099%KU926310.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome1827318273100%0.099%KU922923.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome1827318273100%0.099%KU501215.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome1826418264100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome1826218262100%0.099%KU853012.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds1825418254100%0.099%KU820898.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds1825418254100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds1825418254100%0.099%KU761564.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome1810518105100%0.099%KU744693.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome1805118051100%0.099%KU681081.3Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds177531775399%0.098%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds176881768898%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds1760717607100%0.098%EU545988.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1744317443100%0.098%KU681082.3Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds164331643399%0.095%HQ234499.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1328613286100%0.089%KU720415.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds132811328199%0.089%HQ234498.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1327013270100%0.089%KF383115.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1326813268100%0.089%KF383119.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1326613266100%0.089%KF268949.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1326613266100%0.089%DQ859059.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1326313263100%0.089%LC002520.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1324813248100%0.089%KF268948.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1324113241100%0.089%KF268950.1Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds132141321499%0.089%HQ234501.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1321213212100%0.089%KF383116.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1320513205100%0.089%AY632535.2Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1314213142100%0.088%KF383117.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds131201312099%0.088%HQ234500.1Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1295113019100%0.088%KF383118.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds128641286497%0.089%KF383121.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence108591085997%0.084%KF383120.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds4962496227%0.099%KU312314.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds4935493527%0.099%KU312313.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds4637463725%0.099%KU646828.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds4628462825%0.099%KU646827.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds3431343118%0.099%KU312315.1Select seq gb|KU740199.1|Zika virus isolate VE_Ganxian2016 polyprotein gene, partial cds3202320217%0.099%KU740199.1Select seq gb|DQ859064.1|Spondweni virus strain SM-6 V-1 polyprotein gene, complete cds2847418895%0.071%DQ859064.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds2695269514%0.099%KJ634273.1Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds2042204211%0.099%KU686218.1Select seq gb|KU179098.1|Zika virus isolate JMB-185 nonstructural protein 5 gene, partial cds2008200811%0.099%KU179098.1Select seq gb|KM078936.1|Zika virus strain CHI1410214 NS5 protein gene, partial cds173717379%0.099%KM078936.1Select seq gb|KM078961.1|Zika virus strain CHI2612114 NS5 protein gene, partial cds173617369%0.099%KM078961.1Select seq gb|KM078930.1|Zika virus strain CHI2283714 NS5 protein gene, partial cds173417349%0.099%KM078930.1Select seq gb|KM078971.1|Zika virus strain CHI2613014 NS5 protein gene, partial cds173017309%0.099%KM078971.1Select seq gb|KM078970.1|Zika virus strain CHI2490414 NS5 protein gene, partial cds173017309%0.099%KM078970.1Select seq gb|KM078933.1|Zika virus strain CHI1058514 NS5 protein gene, partial cds173017309%0.099%KM078933.1Select seq gb|KM078929.1|Zika virus strain CHI1805214 NS5 protein gene, partial cds172817289%0.099%KM078929.1Select seq gb|KJ873160.1|Zika virus isolate NC14-03042014-3481 nonstructural protein 5 gene, partial cds158815888%0.099%KJ873160.1Select seq gb|KJ873161.1|Zika virus isolate NC14-02042014-3220 nonstructural protein 5 gene, partial cds140614067%0.099%KJ873161.1Select seq gb|KM851039.1|Zika virus strain SV0127/14 nonstructural protein 5 gene, partial cds137013707%0.098%KM851039.1Select seq gb|KM851038.1|Zika virus strain CPC-0740 nonstructural protein 5 gene, partial cds133313337%0.097%KM851038.1Select seq gb|KU556802.1|Zika virus isolate MEX/InDRE/14/2015 NS5 protein gene, partial cds132413247%0.099%KU556802.1Select seq gb|AF013415.1|Zika virus strain MR-766 NS5 protein (NS5) gene, partial cds1283128310%0.088%AF013415.1Select seq gb|KT200609.1|Zika virus isolate BR/949/15 NS5 gene, partial cds123112316%0.099%KT200609.1Select seq gb|KU232300.1|Zika virus isolate 067ZV_PEBR15 NS5 protein gene, partial cds121612166%0.099%KU232300.1Select seq gb|KU232290.1|Zika virus isolate 036ZV_PEBR15 NS5 protein gene, partial cds120712076%0.099%KU232290.1Select seq gb|KU232297.1|Zika virus isolate 049ZV_PEBR15 NS5 protein gene, partial cds120512056%0.099%KU232297.1Select seq gb|KU232294.1|Zika virus isolate 061ZV_PEBR15 NS5 protein gene, partial cds119811986%0.099%KU232294.1Select seq gb|KU232292.1|Zika virus isolate 054ZV_PEBR15 NS5 protein gene, partial cds119511956%0.099%KU232292.1Select seq gb|KU232298.1|Zika virus isolate 050ZV_PEBR15 NS5 protein gene, partial cds119111916%0.099%KU232298.1Select seq gb|KU232293.1|Zika virus isolate 057ZV_PEBR15 NS5 protein gene, partial cds118911896%0.099%KU232293.1Select seq gb|KU232296.1|Zika virus isolate 045ZV_PEBR15 NS5 protein gene, partial cds118711876%0.099%KU232296.1Select seq gb|KU232295.1|Zika virus isolate 068ZV_PEBR15 NS5 protein gene, partial cds118411846%0.099%KU232295.1Select seq gb|KU232288.1|Zika virus isolate 001ZV_PEBR15 NS5 protein gene, partial cds117311736%0.099%KU232288.1Select seq gb|KU232289.1|Zika virus isolate 020ZV_PEBR15 NS5 protein gene, partial cds116911696%0.099%KU232289.1Select seq gb|KU232299.1|Zika virus isolate 015ZV_PEBR15 NS5 protein gene, partial cds116611666%0.099%KU232299.1Select seq gb|KU232291.1|Zika virus isolate 051ZV_PEBR15 NS5 protein gene, partial cds116211626%0.099%KU232291.1Select seq gb|KU758878.1|Zika virus polyprotein gene, partial cds113011306%0.098%KU758878.1

LOCUS KU955589 10574 bp RNA linear VRL 25-MAR-2016 DEFINITION Zika virus isolate Z16006 polyprotein gene, complete cds. ACCESSION KU955589 VERSION KU955589.1 GI:1008913387 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 10574) AUTHORS Wu,D., Gu,D., Guan,D., Lei,S., Sun,J., Zhang,H., Tan,Q., Ning,D., Su,J., Zhou,H. and Ke,C. TITLE Large returning population of oversea Chinese of Guangdong province combined with tourists increase the risks of ZIKV transmission in Guangdong, China JOURNAL Unpublished REFERENCE 2 (bases 1 to 10574) AUTHORS Wu,D., Gu,D., Guan,D., Lei,S., Sun,J., Zhang,H., Tan,Q., Ning,D., Su,J., Zhou,H. and Ke,C. TITLE Direct Submission JOURNAL Submitted (23-MAR-2016) Institute of Microbiology, Center for Diseases Control and Prevention of Guangdong Province, No. 160, Qunxian Road, Dashi town, Panyu District, Guangzhou, Guangdong 511430, China COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10574 /organism="Zika virus" /mol_type="genomic RNA" /isolate="Z16006" /isolation_source="serum" /host="Homo sapiens" /db_xref="taxon:64320" /country="China" /collection_date="16-Feb-2016" /note="genotype: Asian" CDS 41..10312 /codon_start=1 /product="polyprotein" /protein_id="AMR39830.1" /db_xref="GI:1008913388" /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK RRGADTNVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG EKKITHHWHRSGSTIGKAFEATVRGARRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR GPSLRSTTASGRVIEEWCCRECTMPPLSFQAKDGCWYGMEIRPRKEPESNLVRSMVTA GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ DQRGSGQVVTYALNTFTNLVVQLIRSMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR LKRMAVSGDDCVVRPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST QVRYLGEEGSTPGVL" ORIGIN 1 acaggtttta ttttggattt ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa 61 atccggagga ttccggattg tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt 121 tgggggcttg aagaggctgc cagccggact tctgctgggt catgggccca tcaggatggt 181 cttggcgatt ctagccttct tgagattcac ggcaatcaag ccatcactgg gtctcatcaa 241 tagatggggt tcagtgggga aaaaagaggc tatggaaata ataaagaagt tcaagaaaga 301 tctggctgcc atgctgagaa taatcaatgc taggaaggag aagaagagac gaggcgcaga 361 tactaatgtc ggaattgttg gcctcctgct gaccacagct atggcagcgg aggtcactag 421 acgtgggagt gcatactata tgtacttgga cagaaacgat gctggggagg ccatatcttt 481 tccaaccaca ttggggatga ataagtgtta tatacagatc atggatcttg gacacatgtg 541 tgatgccacc atgagctatg aatgccctat gctggatgag ggggtggaac cagatgacgt 601 cgattgttgg tgcaacacga cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa 661 aggtgaagca cggagatcta gaagagctgt gacgctcccc tcccattcca ctaggaagct 721 gcaaacgcgg tcgcaaactt ggttggaatc aagagaatac acaaagcact tgattagagt 781 cgaaaattgg atattcagga accctggctt cgcgttagca gcagctgcca tcgcttggct 841 tttgggaagc tcaacgagcc aaaaagtcat atacttggtc atgatactgc tgattgcccc 901 ggcatacagc atcaggtgca taggagtcag caatagggac tttgtggaag gtatgtcagg 961 tgggacttgg gttgatgttg tcttggaaca tggaggttgt gtcaccgtaa tggcacagga 1021 caaaccgact gtcgacatag agctggttac aacaacagtc agcaacatgg cggaggtaag 1081 atcctactgc tatgaggcat caatatcgga catggcttcg gacagccgct gcccaacaca 1141 aggtgaagcc taccttgaca agcaatcaga cactcaatat gtctgcaaaa gaacgttagt 1201 ggacagaggc tggggaaatg gatgtggact ttttggcaaa gggagcctgg tgacatgcgc 1261 taagtttgca tgctccaaga aaatgaccgg gaagagcatc cagccagaga atctggagta 1321 ccggataatg ctgtcagttc atggctccca gcacagtggg atgatcgtta atgacacagg 1381 acatgaaact gatgagaata gagcgaaggt tgagataacg cccaattcac caagagccga 1441 agccaccctg gggggttttg gaagcctagg acttgattgt gaaccgagga caggccttga 1501 cttttcagat ttgtattact tgactatgaa taacaagcac tggttggttc acaaggagtg 1561 gttccacgac attccattac cttggcacgc tggggcagac accggaactc cacactggaa 1621 caacaaagaa gcactggtag agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt 1681 tctagggagt caagaaggag cagttcacac ggcccttgct ggagctctgg aggctgagat 1741 ggatggtgca aagggaaggc tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa 1801 acttagattg aagggcgtgt catactcctt gtgtaccgca gcgttcacat tcaccaagat 1861 cccggctgaa acactgcacg ggacagtcac agtggaggta cagtacgcag ggacagatgg 1921 accttgcaag gttccagctc agatggcggt ggacatgcaa actctgaccc cagttgggag 1981 gctgataacc gctaaccccg taatcactga aagcactgag aactccaaga tgatgctgga 2041 acttgatcca ccatttgggg actcttacat tgtcatagga gtcggggaga agaagatcac 2101 ccaccactgg cacaggagtg gcagcaccat tggaaaagca tttgaagcca ctgtgagagg 2161 tgccaggaga atggcagtct tgggagacac agcctgggac tttggatcag ttggaggcgc 2221 tctcaactca ttgggcaagg gcatccatca aatttttgga gcagctttca aatcattgtt 2281 tggaggaatg tcctggttct cacaaattct cattggaacg ttgctgatgt ggttgggtct 2341 gaacacaaag aatggatcta tttcccttat gtgcttggcc ttagggggag tgttgatctt 2401 cttatccaca gccgtctctg ctgatgtggg gtgctcggtg gacttctcaa agaaggagac 2461 gagatgcggt acaggggtgt tcgtctataa cgacgttgaa gcctggaggg acaggtacaa 2521 gtaccatcct gactcccccc gtagattggc agcagcagtc aagcaagcct gggaagatgg 2581 tatctgtggg atctcctctg tttcaagaat ggaaaacatc atgtggagat cagtagaagg 2641 ggagctcaac gcaatcctgg aagagaatgg agttcaactg acggtcgttg tgggatctgt 2701 aaaaaacccc atgtggagag gtccacagag attgcccgtg cctgtgaacg agctgcccca 2761 cggctggaag gcttggggga aatcgtactt cgtcagagca gcaaagacaa ataacagctt 2821 tgtcgtggat ggtgacacac tgaaggaatg cccactcaaa catagagcat ggaacagctt 2881 tcttgtggag gatcatgggt tcggggtatt tcacactagt gtctggctca aggttagaga 2941 agattattca ttagagtgtg atccagccgt tattggaaca gctgttaagg gaaaggaggc 3001 tgtacacagt gatctaggct actggattga gagtgagaag aatgacacat ggaggctgaa 3061 gagggcccat ctgatcgaga tgaaaacatg tgaatggcca aagtcccaca cattgtggac 3121 agatggaata gaagagagtg atctgatcat acccaagtct ttagctgggc cactcagcca 3181 tcacaatacc agagagggct acaggaccca aatgaaaggg ccatggcaca gtgaagagct 3241 tgaaattcgg tttgaggaat gcccaggcac caaggtccac gtggaggaaa catgtggaac 3301 aagaggacca tctctgagat caaccactgc aagcggaagg gtgatcgagg aatggtgctg 3361 cagggagtgc acaatgcccc cactgtcgtt ccaggctaaa gatggctgtt ggtatggaat 3421 ggagataagg cccaggaaag aaccagaaag taacttagta aggtcaatgg tgactgcagg 3481 atcaactgat cacatggatc acttctccct tggagtgctt gtgattctgc tcatggtgca 3541 ggaagggctg aagaagagaa tgaccacaaa gatcatcata agcacatcaa tggcagtgct 3601 ggtagctatg atcctgggag gattttcaat gagtgacctg gctaagcttg caattttgat 3661 gggtgccacc ttcgcggaaa tgaacactgg aggagatgta gctcatctgg cgctgatagc 3721 ggcattcaaa gtcagaccag cgttgctggt atctttcatc ttcagagcta attggacacc 3781 ccgtgaaagc atgctgctgg ccttggcctc gtgtcttttg caaactgcga tctccgcctt 3841 ggaaggcgac ctgatggttc tcatcaatgg ttttgctttg gcctggttgg caatacgagc 3901 gatggttgtt ccacgcactg ataacatcac cttggcaatc ctggctgctc tgacaccact 3961 ggcccggggc acactgcttg tggcgtggag agcaggcctt gctacttgcg gggggtttat 4021 gctcctctct ctgaagggaa aaggcagtgt gaagaagaac ttaccatttg tcatggccct 4081 gggactaacc gctgtgaggc tggtcgaccc catcaacgtg gtgggactgc tgttgctcac 4141 aaggagtggg aagcggagct ggccccctag cgaagtactc acagctgttg gcctgatatg 4201 cgcattggct ggagggttcg ccaaggcaga tatagagatg gctgggccca tggccgcggt 4261 cggtctgcta attgtcagtt acgtggtctc aggaaagagt gtggacatgt acattgaaag 4321 agcaggtgac atcacatggg aaaaagatgc ggaagtcact ggaaacagtc cccggcttga 4381 tgtggcgcta gatgagagtg gtgatttctc cctggtggag gatgacggtc cccccatgag 4441 agagatcata ctcaaggtgg tcctgatgac catctgtggc atgaacccaa tagccatacc 4501 ctttgcagct ggagcgtggt acgtatacgt gaagactgga aaaaggagtg gagctctatg 4561 ggatgtgcct gctcccaagg aagtaaaaaa gggggagacc acagatggag tgtacagagt 4621 gatgactcgt agactgctag gttcaacaca agttggagtg ggagttatgc aagagggggt 4681 ctttcacacc atgtggcacg tcacaaaagg atccgcgctg agaagcggtg aagggagact 4741 tgatccatac tggggagatg tcaagcagga tctggtgtca tactgtggtc catggaagct 4801 agatgccgcc tgggacgggc acagcgaggt gcagctcttg gccgtgcccc ccggagagag 4861 agcgaggaac atccagactc tgcccggaat atttaagaca aaggatgggg acattggagc 4921 ggttgcgctg gattacccag caggaacttc aggatctcca atcctagaca agtgtgggag 4981 agtgatagga ctttatggca atggggtcgt gatcaaaaat gggagttatg ttagtgccat 5041 cacccaaggg aggagggagg aagagactcc tgttgagtgc ttcgagcctt cgatgctgaa 5101 gaagaagcag ctaactgtct tagacttgca tcctggagct gggaaaacca ggagagttct 5161 tcctgaaata gtccgtgaag ccataaaaac aagactccgt actgtgatct tagctccaac 5221 cagggttgtc gctgccgaaa tggaggaagc ccttagaggg cttccagtgc gttatatgac 5281 aacagcagtc aatgtcaccc actctggaac agaaatcgtc gacttaatgt gccatgccac 5341 cttcacttca cgtctactac agccaatcag agtccccaac tataatctgt atattatgga 5401 tgaggcccac ttcacagatc cctcaagtat agcagcaaga ggatacattt caacaagggt 5461 tgagatgggc gaggcggctg ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc 5521 atttccggac tccaactcac caattatgga caccgaagtg gaagtcccag agagagcctg 5581 gagctcaggc tttgattggg tgacggatca ttctggaaaa acagtctggt ttgttccaag 5641 cgtgaggaac ggcaatgaga tcgcagcttg tctgacaaag gctggaaaac gggtcataca 5701 gctcagcaga aagacttttg agacagagtt ccagaaaaca aaacatcaag agtgggactt 5761 tgtcgtgaca actgacattt cagagatggg cgccaacttt aaagctgacc gtgtcataga 5821 ttccaggaga tgcctaaagc cggtcatact tgatggcgag agagtcattc tggctggacc 5881 catgcctgtc acacatgcca gcgctgccca gaggaggggg cgcataggca ggaatcccaa 5941 caaacctgga gatgagtatc tgtatggagg tgggtgcgca gagactgacg aagaccatgc 6001 acactggctt gaagcaagaa tgctccttga caatatttac ctccaagatg gcctcatagc 6061 ctcgctctat cgacctgagg ccgacaaagt agcagccatt gagggagagt tcaagcttag 6121 gacggagcaa aggaagacct ttgtggaact catgaaaaga ggagatcttc ctgtttggct 6181 ggcctatcag gttgcatctg ccggaataac ctacacagat agaagatggt gctttgatgg 6241 cacgaccaac aacaccataa tggaagacag tgtgccggca gaggtgtgga ccagacacgg 6301 agagaaaaga gtgctcaaac cgaggtggat ggacgccaga gtttgttcag atcacgcggc 6361 cctgaagtca ttcaaggagt ttgccgctgg gaaaagagga gcggcttttg gagtgatgga 6421 agccttggga acactgccag gacacatgac agagagattc caggaagcca ttgacaacct 6481 cgctgtgctc atgcgggcag agactggaag caggccttac aaagccgcgg cggcccaatt 6541 gccggagacc ctagagacca ttatgctttt ggggttgctg ggaacagtct cgctgggaat 6601 ctttttcgtc ttgatgagga acaagggcat agggaagatg ggctttggaa tggtgactct 6661 tggggccagc gcatggctca tgtggctctc ggaaattgag ccagccagaa ttgcatgtgt 6721 cctcattgtt gtgttcctat tgctggtggt gctcatacct gagccagaaa agcaaagatc 6781 tccccaggac aaccaaatgg caatcatcat catggtagca gtaggtcttc tgggcttgat 6841 taccgccaat gaactcggat ggttggagag aacaaagagt gacctaagcc atctaatggg 6901 aaggagagag gagggggcaa ccataggatt ctcaatggac attgacctgc ggccagcctc 6961 agcttgggcc atctacgctg ccttgacaac tttcattacc ccagccgtcc aacatgcagt 7021 gaccacttca tacaacaact actccttaat ggcgatggcc acgcaagctg gagtgttgtt 7081 tggtatgggc aaagggatgc cattctacgc atgggacttt ggagtcccgc tgctaatgat 7141 aggttgctac tcacaattaa cacccctgac cctaatagta gccatcattt tgctcgtggc 7201 gcactacatg tacttgatcc cagggctgca ggcagcagct gcgcgtgctg cccagaagag 7261 aacggcagct ggcatcatga agaaccctgt tgtggatgga atagtggtga ctgacattga 7321 cacaatgaca attgaccccc aagtggagaa aaagatggga caggtgctac tcatagcagt 7381 agccgtctcc agcgccatac tgtcgcggac cgcctggggg tggggggagg ctggggccct 7441 gatcacagct gcaacttcca ctttgtggga aggctctccg aacaagtact ggaactcctc 7501 tacagccact tcactgtgta acatttttag gggaagttac ttggctggag cttctctaat 7561 ctacacagta acaagaaacg ctggcttggt caagagacgt gggggtggaa caggagagac 7621 cctgggagag aaatggaagg cccgcttgaa ccagatgtcg gccctggagt tctactccta 7681 caaaaagtca ggcatcaccg aggtgtgcag agaagaggcc cgccgcgccc tcaaggacgg 7741 tgtggcaacg ggaggccatg ctgtgtcccg aggaagtgca aagctgagat ggttggtgga 7801 gcggggatac ctgcagccct atggaaaggt cattgatctt ggatgtggca gagggggctg 7861 gagttactac gccgccacca tccgcaaagt tcaagaagtg aaaggataca caaaaggagg 7921 ccctggtcat gaagaaccca tgttggtgca aagctatggg tggaacatag tccgtcttaa 7981 gagtggggtg gacgtctttc atatggcggc tgagccgtgt gacacgttgc tgtgtgacat 8041 aggtgagtca tcatctagtc ctgaagtgga agaagcacgg acgctcagag tcctttccat 8101 ggtgggggat tggcttgaaa aaagaccagg agccttttgt ataaaagtgt tgtgcccata 8161 caccagcact atgatggaaa ccctggagcg actgcagcgt aggtatgggg gaggactggt 8221 cagagtgcca ctctcccgca actctacaca tgagatgtac tgggtctctg gagcgaaaag 8281 caacaccata aaaagtgtgt ccaccacgag ccagctcctc ttggggcgca tggacgggcc 8341 caggaggcca gtgaaatatg aggaggatgt gaatctcggc tctggcacgc gggctgtggt 8401 aagctgcgct gaagctccca acatgaagat cattggtaac cgcattgaaa ggatccgcag 8461 tgagcacgcg gaaacgtggt tctttgacga gaaccaccca tataggacat gggcttacca 8521 tggaagctat gaggccccca cacaagggtc agcgtcctct ctaataaacg gggttgtcag 8581 gctcctgtca aaaccctggg acgtggtgac tggagtcaca ggaatagcca tgaccgacac 8641 cacaccgtat ggtcagcaaa gagttttcaa ggaaaaagtg gacactaggg tgccagatcc 8701 ccaagaaggc actcgtcagg ttatgagcat ggtctcttcc tggttgtgga aagagctagg 8761 caaacacaaa cggccacgag tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa 8821 tgcagcatta ggggcaatat ttgaagagga aaaagagtgg aagactgcag tggaagctgt 8881 gaacgatcca aggttctggg ctctagtgga caaggaaaga gagcaccacc tgagaggaga 8941 gtgccagagt tgtgtgtaca acatgatggg aaaaagagaa aagaaacaag gggaatttgg 9001 aaaggccaag ggcagccgcg ccatctggta tatgtggcta ggggctagat ttctagagtt 9061 cgaagccctt ggattcttga acgaggatca ctggatgggg agagagaact caggaggtgg 9121 tgttgaaggg ctgggattac aaagactcgg atatgtccta gaagagatga gtcgcatacc 9181 aggaggaagg atgtatgcag atgacactgc tggctgggac acccgcatca gcaggtttga 9241 tctggagaat gaagctctaa tcaccaacca aatggagaaa gggcacaggg ccttggcatt 9301 ggccataatc aagtacacat accaaaacaa agtggtaaag gtccttagac cagctgaaaa 9361 agggaagaca gttatggaca ttatttcgag acaagaccaa agggggagcg gacaagttgt 9421 cacttacgct cttaacacat ttaccaacct agtggtgcaa ctcattcgga gtatggaggc 9481 tgaggaagtt ctagagatgc aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa 9541 ctggctgcag agcaacggat gggataggct caaacgaatg gcagtcagtg gagatgattg 9601 cgttgtgagg ccaattgatg ataggtttgc acatgccctc aggttcttga atgatatggg 9661 gaaagttagg aaggacacac aagagtggaa accctcaact ggatgggaca actgggagga 9721 agttccgttt tgctcccacc acttcaacaa gctccatctc aaggacggga ggtccattgt 9781 ggttccctgc cgccaccaag atgaactgat tggccgggcc cgcgtctctc caggggcggg 9841 atggagcatc cgggagactg cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct 9901 ttatttccac agaagggacc tccgactgat ggccaatgcc atttgttcat ctgtgccagt 9961 tgactgggtt ccaactggga gaactacctg gtcaatccat ggaaagggag aatggatgac 10021 cactgaagac atgcttgtgg tgtggaacag agtgtggatt gaggagaacg accacatgga 10081 agacaagacc ccagttacga aatggacaga cattccctat ttgggaaaaa gggaagactt 10141 gtggtgtgga tctctcatag ggcacagacc gcgcaccacc tgggctgaga acattaaaaa 10201 cacagtcaac atggtgcgca ggatcatagg tgatgaagaa aagtacatgg actacctatc 10261 cacccaagtt cgctacttgg gtgaagaagg gtctacacct ggagtgctgt aagcaccaat 10321 cttagtgttg tcaggcctgc tagtcagcca cagcttgggg aaagctgtgc agcctgtgac 10381 ccccccagga gaagctggga aaccaagcct atagtcaggc cgagaacgcc atggcacgga 10441 agaagccatg ctgcctgtga gcccctcaga ggacactgag tcaaaaaacc ccacgcgctt 10501 ggaggcgcag gatgggaaaa gaaggtggcg accttcccca ccctttaatc tggggcctga 10561 actggagatc agct

Guangdong CDC has released full Zika sequences from Feb 16 import, Z16006.

LOCUS KU955590 10569 bp RNA linear VRL 25-MAR-2016 DEFINITION Zika virus isolate Z16019 polyprotein gene, complete cds. ACCESSION KU955590 VERSION KU955590.1 GI:1008913389 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 10569) AUTHORS Wu,D., Gu,D., Guan,D., Lei,S., Sun,J., Zhang,H., Tan,Q., Ning,D., Su,J., Zhou,H. and Ke,C. TITLE Large returning population of oversea Chinese of Guangdong province combined with tourists increase the risks of ZIKV transmission in Guangdong, China JOURNAL Unpublished REFERENCE 2 (bases 1 to 10569) AUTHORS Wu,D., Guan,D., Sun,J., Zhang,H., Tan,Q., Ning,D., Su,J., Zhou,H. and Ke,C. TITLE Direct Submission JOURNAL Submitted (23-MAR-2016) Institute of Microbiology, Center for Diseases Control and Prevention of Guangdong Province, No. 160, Qunxian Road, Dashi town, Panyu District, Guangzhou, Guangdong 511430, China COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10569 /organism="Zika virus" /mol_type="genomic RNA" /isolate="Z16019" /isolation_source="serum" /host="Homo sapiens" /db_xref="taxon:64320" /country="China" /collection_date="26-Feb-2016" /note="genotype: Asian" CDS 45..10316 /codon_start=1 /product="polyprotein" /protein_id="AMR39831.1" /db_xref="GI:1008913390" /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT AISALEGDLMVLINGFALAWLAVRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVDRGYLQPYGK VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP VKYEEDVNLGSGTRAVASCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST QVRYLGEEGSTPGVL" ORIGIN 1 atcaacaggt tttattttgg atttggaaac gagagtttct ggtcatgaaa aacccaaaaa 61 agaaatccgg aggattccgg attgtcaata tgctaaaacg cggagtagcc cgtgtgagcc 121 cctttggggg cttgaagagg ctgccagccg gacttctgct gggtcatggg cccatcagga 181 tggtcttggc gattctagcc tttttgagat tcacggcaat caagccatca ctgggtctca 241 tcaatagatg gggttcagtg gggaaaaaag aggctatgga aataataaag aagttcaaga 301 aagatctggc tgccatgctg agaataatca atgctaggaa ggagaagaag agacgaggcg 361 cagatactag tgtcggaatt gttggcctcc tgctgaccac agctatggca gcggaggtca 421 ctagacgtgg gagtgcatac tatatgtact tggacagaaa cgatgctggg gaggccatat 481 cttttccaac cacattgggg atgaataagt gttatataca gatcatggat cttggacaca 541 tgtgtgatgc caccatgagc tatgaatgcc ctatgctgga tgagggggtg gaaccagatg 601 acgtcgattg ttggtgcaac acgacgtcaa cttgggttgt gtacggaacc tgccatcaca 661 aaaaaggtga agcacggaga tctagaagag ctgtgacgct cccttcccat tccactagga 721 agctgcaaac gcggtcgcaa acctggttgg aatcaagaga atacacaaag cacttgatta 781 gagtcgaaaa ttggatattc aggaaccctg gcttcgcgtt agcagcagct gccatcgctt 841 ggcttttggg aagctcaacg agccaaaaag tcatatactt ggtcatgata ctgctgattg 901 ccccggcata cagcatcagg tgcataggag tcagcaatag ggactttgtg gaaggtatgt 961 caggtgggac ttgggtcgat gttgtcttgg aacatggagg ttgtgtcacc gtaatggcac 1021 aggacaaacc gactgtcgac atagagctgg ttacaacaac agtcagcaac atggcggagg 1081 taagatccta ctgctatgag gcatcaatat cagacatggc ttcggacagc cgctgcccaa 1141 cacaaggtga agcctacctt gacaagcaat cagacactca atatgtctgc aaaagaacgt 1201 tagtggacag aggctgggga aatggatgtg gactttttgg caaagggagc ctggtgacat 1261 gcgctaagtt tgcatgctcc aagaaaatga ccgggaagag catccagcca gagaatctgg 1321 agtaccggat aatgctgtca gttcatggct cccagcacag tgggatgatc gttaatgaca 1381 caggacatga aactgatgag aatagagcga aagttgagat aacgcccaat tcaccaagag 1441 ccgaagccac cctggggggt tttggaagcc taggacttga ttgtgaaccg aggacaggcc 1501 ttgacttttc agatttgtat tacttgacta tgaataacaa gcactggttg gttcacaagg 1561 agtggttcca cgacattcca ttaccttggc acgcaggggc agacaccgga actccacact 1621 ggaacaacaa agaagcactg gtagagttca aggacgcaca tgccaaaagg caaactgtcg 1681 tggttctagg gagtcaagaa ggagcagttc acacggccct tgctggagct ctggaggctg 1741 agatggatgg agcaaaggga aggctgtcct ctggccactt gaaatgtcgc ctgaaaatgg 1801 ataaacttag attgaagggc gtgtcatact ccttgtgtac tgcagcgttc acattcacca 1861 agatcccggc tgaaacactg cacgggacag tcacagtgga ggtacagtac gcagggacag 1921 atggaccttg caaggttcca gctcagatgg cggtggacat gcaaactctg accccagttg 1981 ggaggttgat aaccgctaac cccgtaatca ctgaaagcac tgagaactct aagatgatgc 2041 tggaacttga tccaccattt ggggactctt acattgtcat aggagtcggg gagaagaaga 2101 tcacccacca ctggcacagg agtggcagca ccattggaaa agcatttgaa gccactgtga 2161 gaggtgccaa gagaatggca gtcttgggag acacagcctg ggactttgga tcagttggag 2221 gcgctctcaa ctcattgggc aagggcatcc atcaaatttt tggagcagct ttcaaatcat 2281 tgtttggagg aatgtcctgg ttctcacaaa ttctcattgg aacgttgctg atgtggttgg 2341 gtctgaacac aaagaatgga tctatttccc ttatgtgctt ggccttaggg ggagtgttga 2401 tcttcttatc cacagccgtc tctgctgatg tggggtgctc ggtggacttc tcaaagaagg 2461 agacgagatg cggtacaggg gtgtttgtct ataacgacgt tgaagcctgg agggacaggt 2521 acaagtacca tcctgactcc ccccgtagat tggcagcagc agtcaagcaa gcctgggaag 2581 atggtatctg cgggatctcc tctgtttcaa gaatggaaaa catcatgtgg agatcagtag 2641 aaggggagct caacgcaatc ctggaagaga atggagttca actgacggtc gttgtgggat 2701 ctgtaaaaaa ccccatgtgg agaggtccac agagattgcc cgtgcctgtg aacgagctgc 2761 cccacggctg gaaggcttgg gggaaatcgt acttcgtcag agcagcaaag acaaataaca 2821 gctttgtcgt ggatggtgac acactgaagg aatgcccact caaacataga gcatggaaca 2881 gctttcttgt ggaggatcat gggttcgggg tatttcacac tagtgtctgg ctcaaggtta 2941 gagaagatta ttcattagag tgtgatccag ccgttattgg aacagctgtt aagggaaagg 3001 aggctgtaca cagtgatcta ggctactgga ttgagagtga gaagaatgac acatggaggc 3061 tgaagagggc ccatctgatc gagatgaaaa catgtgaatg gccaaagtcc cacacattgt 3121 ggacagatgg aatagaagag agtgatctga tcatacccaa gtctttagct gggccactca 3181 gccatcacaa taccagagag ggctacagga cccaaatgaa agggccatgg cacagtgaag 3241 agcttgaaat tcggtttgag gaatgcccag gcactaaggt ccacgtggag gaaacatgtg 3301 gaacaagagg accatctctg agatcaacca ctgcaagcgg aagggtgatc gaggaatggt 3361 gctgcaggga gtgcacaatg cccccactgt cgttccgggc taaagatggc tgttggtatg 3421 gaatggagat aaggcccagg aaagaaccag aaagcaactt agtaaggtca atggtgactg 3481 caggatcaac tgatcacatg gaccacttct cccttggagt gcttgtgatt ctgctcatgg 3541 tgcaggaagg gctgaagaag agaatgacca caaagatcat cataagcaca tcaatggcag 3601 tgctggtagc tatgatcctg ggaggatttt caatgagtga cctggctaag cttgcaattt 3661 tgatgggtgc caccttcgcg gaaatgaaca ctggaggaga tgtagctcat ctggcgctga 3721 tagcggcatt caaagtcaga ccagcgttgc tggtatcttt catcttcaga gctaattgga 3781 caccccgtga aagcatgctg ctggccttgg cctcgtgtct tttgcaaact gcgatctccg 3841 ccttggaagg cgacctgatg gttctcatca atggttttgc tttggcctgg ttggcagtac 3901 gagcgatggt tgttccacgc actgataaca tcaccctagc aatcctggct gctctgacac 3961 cactggcccg gggcacactg cttgtggcgt ggagagcagg ccttgctact tgcggggggt 4021 ttatgctcct ctctctgaag ggaaaaggca gtgtgaagaa gaacttacca tttgtcatgg 4081 ccctgggact aaccgctgtg aggctggtcg accccatcaa cgtggtggga ctgctgttgc 4141 tcacaaggag tgggaagcgg agctggcccc ctagcgaagt actcacagct gttggcctga 4201 tatgcgcatt ggctggaggg ttcgccaagg cagatataga gatggctggg cccatggccg 4261 cggtcggtct gctaattgtc agttacgtgg tctcaggaaa gagtgtggac atgtacattg 4321 aaagagcagg tgacatcaca tgggaaaaag atgcggaagt cactggaaac agtccccggc 4381 tcgatgtggc gctagatgag agtggtgatt tctccctggt ggaggatgac ggtcccccca 4441 tgagagagat catactcaag gtggtcctga tgaccatctg tggcatgaac ccaatagcca 4501 taccctttgc agctggagcg tggtacgtat acgtgaagac tggaaaaagg agtggtgctc 4561 tatgggatgt gcctgctccc aaggaagtaa aaaaggggga gaccacagat ggagtgtaca 4621 gagtaatgac tcgtagactg ctaggttcaa cacaagttgg agtgggagtt atgcaagagg 4681 gggtctttca cactatgtgg cacgtcacaa aaggatccgc gctgagaagc ggtgaaggga 4741 gacttgatcc atactgggga gatgtcaagc aggatctggt gtcatactgt ggtccatgga 4801 agctagatgc cgcctgggac gggcacagcg aggtgcagct cttggccgtg ccccccggag 4861 agagagcgag gaacatccag actctgcccg gaatatttaa gacaaaggat ggggacattg 4921 gagcggttgc gctggattac ccagcaggaa cttcaggatc tccaatccta gacaagtgtg 4981 ggagagtgat aggactttat ggcaatgggg tcgtgatcaa aaatgggagt tatgttagtg 5041 ccatcaccca agggaggagg gaggaagaga ctcctgttga gtgcttcgag ccttcgatgc 5101 tgaagaagaa gcagctaact gtcttagact tgcatcctgg agctgggaaa accaggagag 5161 ttcttcctga aatagtccgt gaagccataa aaacaagact ccgtactgtg atcttagctc 5221 caaccagggt tgtcgctgct gaaatggagg aggcccttag agggcttcca gtgcgttata 5281 tgacaacagc agtcaatgtc acccactctg gaacagaaat cgtcgactta atgtgccatg 5341 ccaccttcac ttcacgtcta ctacagccaa ttagagtccc caactataat ctgtatatta 5401 tggatgaggc ccactttaca gatccctcaa gtatagcagc aagaggatac atttcaacaa 5461 gggttgagat gggcgaggcg gctgccatct tcatgaccgc cacgccacca ggaacccgtg 5521 acgcatttcc ggactccaac tcaccaatta tggacaccga agtggaagtc ccagagagag 5581 cctggagctc aggctttgat tgggtgacgg atcattctgg aaaaacagtt tggtttgttc 5641 caagcgtgag gaacggcaat gagatcgcag cttgtctgac aaaggctgga aaacgggtca 5701 tacagctcag cagaaagact tttgagacag agttccagaa aacaaaacat caagagtggg 5761 actttgtcgt gacaactgac atttcagaga tgggcgccaa ctttaaagct gaccgtgtca 5821 tagattccag gagatgccta aagccggtca tacttgatgg cgagagagtc attctggctg 5881 gacccatgcc tgtcacacat gccagcgctg cccagaggag ggggcgcata ggcaggaatc 5941 ccaacaaacc tggagatgag tatctgtatg gaggtgggtg cgcagagact gacgaagacc 6001 atgcacattg gcttgaagca agaatgctcc ttgacaatat ttacctccaa gatggcctca 6061 tagcctcgct ctatcgacct gaggccgaca aagtagcagc cattgaggga gagttcaagc 6121 ttaggacgga gcaaaggaag acctttgtgg aactcatgaa aagaggagat cttcctgttt 6181 ggctggccta tcaggttgca tctgccggaa taacctacac agatagaaga tggtgctttg 6241 atggcacgac caacaacacc ataatggaag acagtgtgcc ggcagaggtg tggaccagac 6301 acggagagaa aagagtgctc aaaccgaggt ggatggacgc cagagtttgt tcagatcatg 6361 cggccctgaa gtcattcaag gagtttgccg ctgggaaaag aggagcggct tttggagtga 6421 tggaagccct gggaacactg ccaggacaca tgacagagag attccaggaa gccattgaca 6481 acctcgctgt gctcatgcgg gcagagactg gaagcaggcc ttacaaagcc gcggcagccc 6541 aattgccgga gaccctagag accattatgc ttttggggtt gctgggaaca gtctcgctgg 6601 gaatcttctt cgtcttgatg aggaacaagg gcatagggaa gatgggcttt ggaatggtga 6661 ctcttggggc cagcgcatgg ctcatgtggc tctcggaaat tgagccagcc agaattgcat 6721 gtgtcctcat tgttgtgttc ctattgctgg tggtgctcat acctgagcca gaaaagcaaa 6781 gatctcccca ggacaaccaa atggcaatca tcattatggt agcagtaggt cttctgggct 6841 tgattaccgc caatgaactc ggatggttgg agagaacaaa gagtgaccta agccatctaa 6901 tgggaaggag agaggagggg gcaaccatag gattctcaat ggacattgac ctgcggccag 6961 cctcagcttg ggccatctat gctgccttga caactttcat taccccagcc gtccaacatg 7021 cagtgaccac ctcatacaac aactactcct taatggcgat ggccacgcaa gctggagtgt 7081 tgtttggtat gggcaaaggg atgccattct acgcatggga ctttggagtc ccgctgctaa 7141 tgataggttg ctactcacaa ttaacacccc tgaccctaat agtggccatc attttgctcg 7201 tggcgcacta catgtacttg atcccagggc tgcaggcagc agctgcgcgt gctgcccaga 7261 agagaacggc agctggcatc atgaagaacc ctgttgtgga tggaatagtg gtgactgaca 7321 ttgacacaat gacaattgac ccccaagtgg agaaaaagat gggacaggtg ctactcatag 7381 cagtagccgt ctccagcgcc atactgtcgc ggaccgcctg ggggtggggg gaggctgggg 7441 ccctgatcac agccgcaact tccactttgt gggaaggctc tccgaacaag tactggaact 7501 cctctacagc cacttcactg tgtaacattt ttaggggaag ttacttggct ggagcttctc 7561 taatctacac agtaacaaga aacgctggct tggtcaagag acgtgggggt ggaacaggag 7621 agaccctggg agagaaatgg aaggcccgct tgaaccagat gtcggccctg gagttctact 7681 cctacaaaaa gtcaggcatc accgaggtgt gcagagaaga ggcccgccgc gccctcaagg 7741 acggtgtggc aacgggaggc catgctgtgt cccgaggaag tgcaaagctg agatggttgg 7801 tggatcgggg atacctgcag ccctatggaa aggtcattga tcttggatgt ggcagagggg 7861 gctggagtta ctacgccgcc accatccgca aagttcaaga agtgaaagga tacacaaaag 7921 gaggccctgg tcatgaagaa cccgtgttgg tgcaaagcta tgggtggaac atagtccgtc 7981 ttaagagtgg ggtggacgtc tttcatatgg cggctgagcc gtgtgacacg ttgctgtgtg 8041 acataggtga gtcatcatct agtcctgaag tggaagaagc acggacgctc agagtcctct 8101 ccatggtggg ggattggctt gaaaaaagac caggagcctt ttgcataaaa gtgttgtgcc 8161 catacaccag cactatgatg gaaaccctgg agcgactgca gcgtaggtat gggggaggac 8221 tggtcagagt gccactctcc cgcaactcta cacatgagat gtactgggtc tctggagcga 8281 aaagcaacac cataaaaagt gtgtccacca cgagccagct cctcttgggg cgcatggacg 8341 ggcctaggag gccagtgaaa tatgaggagg atgtgaatct cggctctggc acgcgggctg 8401 tggcaagctg cgctgaagct cccaacatga agatcattgg taaccgcatt gaaaggatcc 8461 gcagtgagca cgcggaaacg tggttctttg acgagaacca cccatatagg acatgggctt 8521 accatggaag ctatgaggcc cccacacaag ggtcagcgtc ctctctaata aacggggttg 8581 tcaggctcct gtcaaaaccc tgggatgtgg tgactggagt cacaggaata gccatgaccg 8641 acaccacacc gtatggtcag caaagagttt tcaaggaaaa agtggacact agggtgccag 8701 acccccaaga aggcactcgt caggttatga gcatggtctc ttcctggttg tggaaagagc 8761 taggcaaaca caaacggcca cgagtctgta ccaaagaaga gttcatcaac aaggttcgta 8821 gcaatgcagc attaggggca atatttgaag aggaaaaaga gtggaagact gcagtggaag 8881 ctgtgaacga tccaaggttc tgggctctag tggacaagga aagagagcac cacctgagag 8941 gagagtgcca gagttgtgtg tacaacatga tgggaaaaag agaaaagaaa caaggggaat 9001 ttggaaaggc caagggcagc cgcgccatct ggtatatgtg gctgggggct agatttctag 9061 agttcgaagc ccttggattc ttgaacgagg atcactggat ggggagagag aactcaggag 9121 gtggtgttga agggctggga ttacaaagac tcggatatgt cctagaagag atgagtcgta 9181 taccaggagg aaggatgtat gcagatgaca ctgctggctg ggacacccgc attagcaggt 9241 ttgatctgga gaatgaagct ctaatcacca accaaatgga gaaagggcac agggccttgg 9301 cattggccat aatcaagtac acataccaaa acaaagtggt aaaggtcctt agaccagctg 9361 aaaaagggaa aacagttatg gacattattt cgagacaaga ccaaaggggg agcggacaag 9421 ttgtcactta cgctcttaac acatttacca acctagtggt gcaactcatt cggaatatgg 9481 aggctgagga agttctagag atgcaagact tgtggctgct gcggaggtca gagaaagtga 9541 ccaactggtt gcagagcaac ggatgggata ggctcaaacg aatggcagtc agtggagatg 9601 attgcgttgt gaagccaatt gatgataggt ttgcacatgc cctcaggttc ttgaatgata 9661 tgggaaaagt taggaaggac acacaagagt ggaaaccctc aactggatgg gacaactggg 9721 aagaagttcc gttttgctcc caccatttca acaagctcca tctcaaggac gggaggtcca 9781 ttgtggttcc ctgccgccac caagatgaac tgattggccg ggcccgcgtc tctccagggg 9841 cgggatggag catccgggag actgcttgcc tagcaaaatc atatgcgcaa atgtggcagc 9901 tcctttattt ccacagaagg gacctccgac tgatggccaa tgccatttgt tcatctgtgc 9961 cagttgactg ggttccaact gggagaacta cctggtcaat ccatggaaag ggagaatgga 10021 tgaccactga ggacatgctt gtggtgtgga acagagtgtg gattgaggag aacgaccaca 10081 tggaagacaa gaccccagtt acgaaatgga cagacattcc ctatttggga aaaagggaag 10141 acttgtggtg tggatctctc atagggcaca gaccgcgcac cacctgggct gagaacatta 10201 aaaacacagt caacatggtg cgcaggatca taggtgatga agaaaagtac atggattacc 10261 tatccaccca agttcgctac ttgggtgaag aagggtctac acctggagtg ctgtaagcac 10321 caatcttaat gttgtcaggc ctgctagtca gccacagctt ggggaaagct gtgcagcctg 10381 tgaccccccc aggagaagct gggaaaccaa gcctatagtc aggccgagaa cgccatggca 10441 cggaagaagc catgctgcct gtgagcccct cagaggacac tgagtcaaaa aaccccacgc 10501 gcttggaggc gcaggatggg aaaagaaggt ggcgaccttc cccacccttc aatctggggc 10561 ctgaactgg

Guangdong CDC has released full sequence of Zika import collected Feb 26,2016, Z16019.

Sequences producing significant alignments:Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome1852518525100%0.0100%KU870645.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds1842018420100%0.099%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds1841718417100%0.099%KU501216.1Select seq gb|KU509998.1|Zika virus strain Haiti/1225/2014, complete genome1837518375100%0.099%KU509998.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds1837218372100%0.099%KJ776791.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome1836318363100%0.099%KU707826.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds1836318363100%0.099%KU365779.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome1836318363100%0.099%KU321639.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome1835718357100%0.099%KU926309.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds1835418354100%0.099%KU729218.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds1834818348100%0.099%KU365780.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds1834518345100%0.099%KU365777.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds1833618336100%0.099%KU647676.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds1833018330100%0.099%KU365778.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds1833018330100%0.099%KU312312.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds1832718327100%0.099%KU729217.2Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome183271832799%0.099%KU497555.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome1832718327100%0.099%KU527068.1Select seq gb|KU820897.1|Zika virus isolate FLR polyprotein gene, complete cds1832118321100%0.099%KU820897.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome1832118321100%0.099%KU501215.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome1831818318100%0.099%KU922960.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome1831218312100%0.099%KU926310.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome1831218312100%0.099%KU922923.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds1830318303100%0.099%KU820898.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome1830318303100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome1830318303100%0.099%KU853012.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds1830018300100%0.099%KU955590.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds1829418294100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds1829418294100%0.099%KU761564.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds1826718267100%0.099%KU955589.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome1826718267100%0.099%KU820899.2Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds1815918159100%0.099%KU866423.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome1813718137100%0.099%KU744693.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome1802918029100%0.099%KU681081.3Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome1773217732100%0.098%KU955593.1Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds177301773099%0.098%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds176761767698%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds1756717567100%0.098%EU545988.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1742917429100%0.098%KU681082.3Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds163971639799%0.095%HQ234499.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1328613286100%0.089%KU720415.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds132811328199%0.089%HQ234498.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1327513275100%0.089%KF383115.1Select seq gb|KU955595.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41671-DAK, complete genome1327213272100%0.089%KU955595.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1327013270100%0.089%KF268949.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1327013270100%0.089%KF268948.1Select seq gb|KU955592.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41662-DAK, complete genome1326313263100%0.089%KU955592.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1326313263100%0.089%LC002520.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1326313263100%0.089%KF268950.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1325913259100%0.089%KF383119.1Select seq gb|KU955594.1|Zika virus isolate Zika virus/M.mulatta-tc/UGA/1947/MR-766, complete genome1324713247100%0.089%KU955594.1Select seq gb|KU955591.1|Zika virus isolate Zika virus/A.africanus-tc/SEN/1984/41525-DAK, complete genome1324513245100%0.089%KU955591.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1324313243100%0.089%DQ859059.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1323013230100%0.089%KF383116.1Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds132141321499%0.089%HQ234501.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1320513205100%0.089%AY632535.2Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1316013160100%0.088%KF383117.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds131441314499%0.088%HQ234500.1Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1294513013100%0.088%KF383118.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds128551285597%0.089%KF383121.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence108771087797%0.084%KF383120.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds4967496727%0.099%KU312314.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds4940494027%0.099%KU312313.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds4655465525%0.099%KU646828.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds4646464625%0.099%KU646827.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds3440344018%0.099%KU312315.1Select seq gb|KU740199.1|Zika virus isolate VE_Ganxian2016 polyprotein gene, partial cds3214321417%0.099%KU740199.1Select seq gb|DQ859064.1|Spondweni virus strain SM-6 V-1 polyprotein gene, complete cds2879420695%0.071%DQ859064.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds2695269514%0.099%KJ634273.1Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds2042204211%0.099%KU686218.1Select seq gb|KU179098.1|Zika virus isolate JMB-185 nonstructural protein 5 gene, partial cds2021202111%0.099%KU179098.1Select seq gb|KM078936.1|Zika virus strain CHI1410214 NS5 protein gene, partial cds175217529%0.099%KM078936.1Select seq gb|KM078961.1|Zika virus strain CHI2612114 NS5 protein gene, partial cds174817489%0.099%KM078961.1Select seq gb|KM078930.1|Zika virus strain CHI2283714 NS5 protein gene, partial cds174617469%0.099%KM078930.1Select seq gb|KM078971.1|Zika virus strain CHI2613014 NS5 protein gene, partial cds174517459%0.099%KM078971.1Select seq gb|KM078970.1|Zika virus strain CHI2490414 NS5 protein gene, partial cds174517459%0.099%KM078970.1Select seq gb|KM078933.1|Zika virus strain CHI1058514 NS5 protein gene, partial cds174517459%0.099%KM078933.1Select seq gb|KM078929.1|Zika virus strain CHI1805214 NS5 protein gene, partial cds174317439%0.099%KM078929.1Select seq gb|KJ873160.1|Zika virus isolate NC14-03042014-3481 nonstructural protein 5 gene, partial cds160216028%0.099%KJ873160.1Select seq gb|KJ873161.1|Zika virus isolate NC14-02042014-3220 nonstructural protein 5 gene, partial cds142014207%0.099%KJ873161.1Select seq gb|KM851039.1|Zika virus strain SV0127/14 nonstructural protein 5 gene, partial cds138813887%0.099%KM851039.1Select seq gb|KM851038.1|Zika virus strain CPC-0740 nonstructural protein 5 gene, partial cds135213527%0.098%KM851038.1Select seq gb|KU556802.1|Zika virus isolate MEX/InDRE/14/2015 NS5 protein gene, partial cds134613467%0.099%KU556802.1Select seq gb|AF013415.1|Zika virus strain MR-766 NS5 protein (NS5) gene, partial cds1306130610%0.088%AF013415.1Select seq gb|KU232300.1|Zika virus isolate 067ZV_PEBR15 NS5 protein gene, partial cds124012406%0.099%KU232300.1Select seq gb|KT200609.1|Zika virus isolate BR/949/15 NS5 gene, partial cds124012406%0.099%KT200609.1Select seq gb|KU232290.1|Zika virus isolate 036ZV_PEBR15 NS5 protein gene, partial cds123112316%0.099%KU232290.1Select seq gb|KU232297.1|Zika virus isolate 049ZV_PEBR15 NS5 protein gene, partial cds122912296%0.099%KU232297.1Select seq gb|KU232294.1|Zika virus isolate 061ZV_PEBR15 NS5 protein gene, partial cds122012206%0.099%KU232294.1Select seq gb|KU232292.1|Zika virus isolate 054ZV_PEBR15 NS5 protein gene, partial cds121812186%0.099%KU232292.1Select seq gb|KU232298.1|Zika virus isolate 050ZV_PEBR15 NS5 protein gene, partial cds121412146%0.099%KU232298.1Select seq gb|KU232296.1|Zika virus isolate 045ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232296.1Select seq gb|KU232293.1|Zika virus isolate 057ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232293.1Select seq gb|KU232295.1|Zika virus isolate 068ZV_PEBR15 NS5 protein gene, partial cds120512056%0.099%KU232295.1Select seq gb|KU232288.1|Zika virus isolate 001ZV_PEBR15 NS5 protein gene, partial cds119511956%0.099%KU232288.1Select seq gb|KU232289.1|Zika virus isolate 020ZV_PEBR15 NS5 protein gene, partial cds119111916%0.099%KU232289.1Select seq gb|KU232299.1|Zika virus isolate 015ZV_PEBR15 NS5 protein gene, partial cds118711876%0.099%KU232299.1Select seq gb|KU232291.1|Zika virus isolate 051ZV_PEBR15 NS5 protein gene, partial cds118611866%0.099%KU232291.1

Sequences producing significant alignments:Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome1852518525100%0.0100%KU870645.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds1842018420100%0.099%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds1841718417100%0.099%KU501216.1Select seq gb|KU509998.1|Zika virus strain Haiti/1225/2014, complete genome1837518375100%0.099%KU509998.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds1837218372100%0.099%KJ776791.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome1836318363100%0.099%KU707826.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds1836318363100%0.099%KU365779.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome1836318363100%0.099%KU321639.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome1835718357100%0.099%KU926309.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds1835418354100%0.099%KU729218.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds1834818348100%0.099%KU365780.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds1834518345100%0.099%KU365777.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds1833618336100%0.099%KU647676.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds1833018330100%0.099%KU365778.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds1833018330100%0.099%KU312312.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds1832718327100%0.099%KU729217.2Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome183271832799%0.099%KU497555.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome1832718327100%0.099%KU527068.1Select seq gb|KU820897.1|Zika virus isolate FLR polyprotein gene, complete cds1832118321100%0.099%KU820897.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome1832118321100%0.099%KU501215.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome1831818318100%0.099%KU922960.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome1831218312100%0.099%KU926310.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome1831218312100%0.099%KU922923.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds1830318303100%0.099%KU820898.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome1830318303100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome1830318303100%0.099%KU853012.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds1830018300100%0.099%KU955590.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds1829418294100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds1829418294100%0.099%KU761564.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds1826718267100%0.099%KU955589.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome1826718267100%0.099%KU820899.2Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds1815918159100%0.099%KU866423.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome1813718137100%0.099%KU744693.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome1802918029100%0.099%KU681081.3Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome1773217732100%0.098%KU955593.1Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds177301773099%0.098%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds176761767698%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds1756717567100%0.098%EU545988.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1742917429100%0.098%KU681082.3Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds163971639799%0.095%HQ234499.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1328613286100%0.089%KU720415.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds132811328199%0.089%HQ234498.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1327513275100%0.089%KF383115.1Select seq gb|KU955595.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41671-DAK, complete genome1327213272100%0.089%KU955595.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1327013270100%0.089%KF268949.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1327013270100%0.089%KF268948.1Select seq gb|KU955592.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41662-DAK, complete genome1326313263100%0.089%KU955592.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1326313263100%0.089%LC002520.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1326313263100%0.089%KF268950.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1325913259100%0.089%KF383119.1Select seq gb|KU955594.1|Zika virus isolate Zika virus/M.mulatta-tc/UGA/1947/MR-766, complete genome1324713247100%0.089%KU955594.1Select seq gb|KU955591.1|Zika virus isolate Zika virus/A.africanus-tc/SEN/1984/41525-DAK, complete genome1324513245100%0.089%KU955591.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1324313243100%0.089%DQ859059.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1323013230100%0.089%KF383116.1Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds132141321499%0.089%HQ234501.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1320513205100%0.089%AY632535.2Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1316013160100%0.088%KF383117.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds131441314499%0.088%HQ234500.1Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1294513013100%0.088%KF383118.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds128551285597%0.089%KF383121.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence108771087797%0.084%KF383120.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds4967496727%0.099%KU312314.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds4940494027%0.099%KU312313.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds4655465525%0.099%KU646828.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds4646464625%0.099%KU646827.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds3440344018%0.099%KU312315.1Select seq gb|KU740199.1|Zika virus isolate VE_Ganxian2016 polyprotein gene, partial cds3214321417%0.099%KU740199.1Select seq gb|DQ859064.1|Spondweni virus strain SM-6 V-1 polyprotein gene, complete cds2879420695%0.071%DQ859064.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds2695269514%0.099%KJ634273.1Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds2042204211%0.099%KU686218.1Select seq gb|KU179098.1|Zika virus isolate JMB-185 nonstructural protein 5 gene, partial cds2021202111%0.099%KU179098.1Select seq gb|KM078936.1|Zika virus strain CHI1410214 NS5 protein gene, partial cds175217529%0.099%KM078936.1Select seq gb|KM078961.1|Zika virus strain CHI2612114 NS5 protein gene, partial cds174817489%0.099%KM078961.1Select seq gb|KM078930.1|Zika virus strain CHI2283714 NS5 protein gene, partial cds174617469%0.099%KM078930.1Select seq gb|KM078971.1|Zika virus strain CHI2613014 NS5 protein gene, partial cds174517459%0.099%KM078971.1Select seq gb|KM078970.1|Zika virus strain CHI2490414 NS5 protein gene, partial cds174517459%0.099%KM078970.1Select seq gb|KM078933.1|Zika virus strain CHI1058514 NS5 protein gene, partial cds174517459%0.099%KM078933.1Select seq gb|KM078929.1|Zika virus strain CHI1805214 NS5 protein gene, partial cds174317439%0.099%KM078929.1Select seq gb|KJ873160.1|Zika virus isolate NC14-03042014-3481 nonstructural protein 5 gene, partial cds160216028%0.099%KJ873160.1Select seq gb|KJ873161.1|Zika virus isolate NC14-02042014-3220 nonstructural protein 5 gene, partial cds142014207%0.099%KJ873161.1Select seq gb|KM851039.1|Zika virus strain SV0127/14 nonstructural protein 5 gene, partial cds138813887%0.099%KM851039.1Select seq gb|KM851038.1|Zika virus strain CPC-0740 nonstructural protein 5 gene, partial cds135213527%0.098%KM851038.1Select seq gb|KU556802.1|Zika virus isolate MEX/InDRE/14/2015 NS5 protein gene, partial cds134613467%0.099%KU556802.1Select seq gb|AF013415.1|Zika virus strain MR-766 NS5 protein (NS5) gene, partial cds1306130610%0.088%AF013415.1Select seq gb|KU232300.1|Zika virus isolate 067ZV_PEBR15 NS5 protein gene, partial cds124012406%0.099%KU232300.1Select seq gb|KT200609.1|Zika virus isolate BR/949/15 NS5 gene, partial cds124012406%0.099%KT200609.1Select seq gb|KU232290.1|Zika virus isolate 036ZV_PEBR15 NS5 protein gene, partial cds123112316%0.099%KU232290.1Select seq gb|KU232297.1|Zika virus isolate 049ZV_PEBR15 NS5 protein gene, partial cds122912296%0.099%KU232297.1Select seq gb|KU232294.1|Zika virus isolate 061ZV_PEBR15 NS5 protein gene, partial cds122012206%0.099%KU232294.1Select seq gb|KU232292.1|Zika virus isolate 054ZV_PEBR15 NS5 protein gene, partial cds121812186%0.099%KU232292.1Select seq gb|KU232298.1|Zika virus isolate 050ZV_PEBR15 NS5 protein gene, partial cds121412146%0.099%KU232298.1Select seq gb|KU232296.1|Zika virus isolate 045ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232296.1Select seq gb|KU232293.1|Zika virus isolate 057ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232293.1Select seq gb|KU232295.1|Zika virus isolate 068ZV_PEBR15 NS5 protein gene, partial cds120512056%0.099%KU232295.1Select seq gb|KU232288.1|Zika virus isolate 001ZV_PEBR15 NS5 protein gene, partial cds119511956%0.099%KU232288.1Select seq gb|KU232289.1|Zika virus isolate 020ZV_PEBR15 NS5 protein gene, partial cds119111916%0.099%KU232289.1Select seq gb|KU232299.1|Zika virus isolate 015ZV_PEBR15 NS5 protein gene, partial cds118711876%0.099%KU232299.1Select seq gb|KU232291.1|Zika virus isolate 051ZV_PEBR15 NS5 protein gene, partial cds118611866%0.099%KU232291.1

Sequences producing significant alignments:Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome1852518525100%0.0100%KU870645.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds1842018420100%0.099%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds1841718417100%0.099%KU501216.1Select seq gb|KU509998.1|Zika virus strain Haiti/1225/2014, complete genome1837518375100%0.099%KU509998.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds1837218372100%0.099%KJ776791.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome1836318363100%0.099%KU707826.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds1836318363100%0.099%KU365779.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome1836318363100%0.099%KU321639.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome1835718357100%0.099%KU926309.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds1835418354100%0.099%KU729218.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds1834818348100%0.099%KU365780.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds1834518345100%0.099%KU365777.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds1833618336100%0.099%KU647676.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds1833018330100%0.099%KU365778.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds1833018330100%0.099%KU312312.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds1832718327100%0.099%KU729217.2Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome183271832799%0.099%KU497555.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome1832718327100%0.099%KU527068.1Select seq gb|KU820897.1|Zika virus isolate FLR polyprotein gene, complete cds1832118321100%0.099%KU820897.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome1832118321100%0.099%KU501215.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome1831818318100%0.099%KU922960.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome1831218312100%0.099%KU926310.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome1831218312100%0.099%KU922923.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds1830318303100%0.099%KU820898.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome1830318303100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome1830318303100%0.099%KU853012.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds1830018300100%0.099%KU955590.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds1829418294100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds1829418294100%0.099%KU761564.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds1826718267100%0.099%KU955589.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome1826718267100%0.099%KU820899.2Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds1815918159100%0.099%KU866423.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome1813718137100%0.099%KU744693.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome1802918029100%0.099%KU681081.3Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome1773217732100%0.098%KU955593.1Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds177301773099%0.098%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds176761767698%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds1756717567100%0.098%EU545988.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1742917429100%0.098%KU681082.3Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds163971639799%0.095%HQ234499.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1328613286100%0.089%KU720415.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds132811328199%0.089%HQ234498.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1327513275100%0.089%KF383115.1Select seq gb|KU955595.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41671-DAK, complete genome1327213272100%0.089%KU955595.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1327013270100%0.089%KF268949.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1327013270100%0.089%KF268948.1Select seq gb|KU955592.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41662-DAK, complete genome1326313263100%0.089%KU955592.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1326313263100%0.089%LC002520.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1326313263100%0.089%KF268950.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1325913259100%0.089%KF383119.1Select seq gb|KU955594.1|Zika virus isolate Zika virus/M.mulatta-tc/UGA/1947/MR-766, complete genome1324713247100%0.089%KU955594.1Select seq gb|KU955591.1|Zika virus isolate Zika virus/A.africanus-tc/SEN/1984/41525-DAK, complete genome1324513245100%0.089%KU955591.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1324313243100%0.089%DQ859059.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1323013230100%0.089%KF383116.1Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds132141321499%0.089%HQ234501.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1320513205100%0.089%AY632535.2Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1316013160100%0.088%KF383117.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds131441314499%0.088%HQ234500.1Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1294513013100%0.088%KF383118.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds128551285597%0.089%KF383121.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence108771087797%0.084%KF383120.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds4967496727%0.099%KU312314.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds4940494027%0.099%KU312313.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds4655465525%0.099%KU646828.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds4646464625%0.099%KU646827.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds3440344018%0.099%KU312315.1Select seq gb|KU740199.1|Zika virus isolate VE_Ganxian2016 polyprotein gene, partial cds3214321417%0.099%KU740199.1Select seq gb|DQ859064.1|Spondweni virus strain SM-6 V-1 polyprotein gene, complete cds2879420695%0.071%DQ859064.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds2695269514%0.099%KJ634273.1Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds2042204211%0.099%KU686218.1Select seq gb|KU179098.1|Zika virus isolate JMB-185 nonstructural protein 5 gene, partial cds2021202111%0.099%KU179098.1Select seq gb|KM078936.1|Zika virus strain CHI1410214 NS5 protein gene, partial cds175217529%0.099%KM078936.1Select seq gb|KM078961.1|Zika virus strain CHI2612114 NS5 protein gene, partial cds174817489%0.099%KM078961.1Select seq gb|KM078930.1|Zika virus strain CHI2283714 NS5 protein gene, partial cds174617469%0.099%KM078930.1Select seq gb|KM078971.1|Zika virus strain CHI2613014 NS5 protein gene, partial cds174517459%0.099%KM078971.1Select seq gb|KM078970.1|Zika virus strain CHI2490414 NS5 protein gene, partial cds174517459%0.099%KM078970.1Select seq gb|KM078933.1|Zika virus strain CHI1058514 NS5 protein gene, partial cds174517459%0.099%KM078933.1Select seq gb|KM078929.1|Zika virus strain CHI1805214 NS5 protein gene, partial cds174317439%0.099%KM078929.1Select seq gb|KJ873160.1|Zika virus isolate NC14-03042014-3481 nonstructural protein 5 gene, partial cds160216028%0.099%KJ873160.1Select seq gb|KJ873161.1|Zika virus isolate NC14-02042014-3220 nonstructural protein 5 gene, partial cds142014207%0.099%KJ873161.1Select seq gb|KM851039.1|Zika virus strain SV0127/14 nonstructural protein 5 gene, partial cds138813887%0.099%KM851039.1Select seq gb|KM851038.1|Zika virus strain CPC-0740 nonstructural protein 5 gene, partial cds135213527%0.098%KM851038.1Select seq gb|KU556802.1|Zika virus isolate MEX/InDRE/14/2015 NS5 protein gene, partial cds134613467%0.099%KU556802.1Select seq gb|AF013415.1|Zika virus strain MR-766 NS5 protein (NS5) gene, partial cds1306130610%0.088%AF013415.1Select seq gb|KU232300.1|Zika virus isolate 067ZV_PEBR15 NS5 protein gene, partial cds124012406%0.099%KU232300.1Select seq gb|KT200609.1|Zika virus isolate BR/949/15 NS5 gene, partial cds124012406%0.099%KT200609.1Select seq gb|KU232290.1|Zika virus isolate 036ZV_PEBR15 NS5 protein gene, partial cds123112316%0.099%KU232290.1Select seq gb|KU232297.1|Zika virus isolate 049ZV_PEBR15 NS5 protein gene, partial cds122912296%0.099%KU232297.1Select seq gb|KU232294.1|Zika virus isolate 061ZV_PEBR15 NS5 protein gene, partial cds122012206%0.099%KU232294.1Select seq gb|KU232292.1|Zika virus isolate 054ZV_PEBR15 NS5 protein gene, partial cds121812186%0.099%KU232292.1Select seq gb|KU232298.1|Zika virus isolate 050ZV_PEBR15 NS5 protein gene, partial cds121412146%0.099%KU232298.1Select seq gb|KU232296.1|Zika virus isolate 045ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232296.1Select seq gb|KU232293.1|Zika virus isolate 057ZV_PEBR15 NS5 protein gene, partial cds121112116%0.099%KU232293.1Select seq gb|KU232295.1|Zika virus isolate 068ZV_PEBR15 NS5 protein gene, partial cds120512056%0.099%KU232295.1Select seq gb|KU232288.1|Zika virus isolate 001ZV_PEBR15 NS5 protein gene, partial cds119511956%0.099%KU232288.1Select seq gb|KU232289.1|Zika virus isolate 020ZV_PEBR15 NS5 protein gene, partial cds119111916%0.099%KU232289.1Select seq gb|KU232299.1|Zika virus isolate 015ZV_PEBR15 NS5 protein gene, partial cds118711876%0.099%KU232299.1Select seq gb|KU232291.1|Zika virus isolate 051ZV_PEBR15 NS5 protein gene, partial cds118611866%0.099%KU232291.1

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As of March 25, 20169 confirmed travel-related Zika cases in Georgiahttp://dph.georgia.gov/

As of March 25, 20169 confirmed travel-related Zika cases in Georgia

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California Department of Public Health (CDPH) Director and State Public Health Officer Dr. Karen Smith today announced the first confirmed case of Zika virus acquired in California. This case involves transmission of Zika virus through sexual contact with a Zika infected partner who returned from a country where Zika virus was circulating, not from a mosquito bite. The woman who was infected was not pregnant and had not traveled out of the country. She and her partner have fully recovered. https://www.cdph.ca.gov/Pages/NR16-016.aspx

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