Sequences (COVID)

The sequence from the Mecklenburg Co case has not been released. It will be give a UNK number, which will be updated when released. USA/NC-CDC-STM-UNK1163/2021 Mecklenburg County USA/NC-CDC-STM-0000013-G10/2021 1/11 North Carolina The North Carolina Department of Health and Human Services said the B.1.1.7 variant was identified in a sample from an adult in Mecklenburg County processed by Mako Medical Laboratories. https://www.wavy.com/news/north-carolina/first-case-of-covid-19-variant-reported-in-nc/

Latvian Biomedical Research and Study Centre has released two B.1.1.7 SARS CoV2 variant sequences (Latvia/230/2021, Latvia/232/2021) collected Jan 12.

Latvian Biomedical Research and Study Centre has released two B.1.1.7 SARS CoV2 variant sequences (Latvia/229/2021, Latvia/231/2021) collected Jan 12.

COG-UK has released a 501.v2 SARS CoV2 variant sequence (England/210291017/2021) collected Jan 14.

COG-UK has released two 501.v2 SARS CoV2 variant sequences (England/210300233/2021, England/210290874/2021) collected Jan 13-16.

Charité Universitätsmedizin Berlin has released a 501.v2 SARS CoV2 variant sequence (Germany/HE-ChVir22108/2021 ) collected in Hesse on Jan 8.

Charité Universitätsmedizin Berlin has released a 501.v2 SARS CoV2 variant sequence (Germany/NI-ChVir21668/2020 ) collected in Lower Saxony on Dec 29.

Instituto Adolfo Lutz has released a B.1.1.7 SARS CoV2 two sequences (Brazil/SP-981/2021Brazil/SP-981/2021, Brazil/SP-982/2021) collected in Sorocaba on Jan 7.

The sequences for the two cases below, Philippines ex-Lebanon have not been released. They will be assigned UNK numbers which will be updated upon release. Philippines/PH-RITM-UNK156/2021 Philippines Philippines/PH-RITM-UNK157/2021 Philippines

The sequence from La Trinidad Benguet has not been released. It will be assingned an UNK number, which will be updated upon release. Philippines/PH-RITM-UNK154/2021 La Trinidad Benguet Philippines

The sequence from Calamba Laguna has not been released. It will be given an UNK number and updated upon release. Philippines/PH-RITM-UNK155/2021 Calamba Laguna Philippines

Oklahoma Animal Disease Diagnostic Laboratory has released three B.1.1.7 SARS CoV2 Sequences (USA/OK-ADDL-7/2021, USA/OK-ADDL-8/2021, USA/OK-ADDL-8/2021) collected Jan 18-9.

The sequence for the fourth B.1.1.7 case in Maryland, as cited in the CDC variant map, has not been released. it will be assigned a UNK number which will be updated upon release. USA/MD-CDC-STM-UNK156/2021 Maryland USA/MD-MDH-0669/2021 1/12 Maryland B.1.1.7 Lineage Cases in the United States*† Total Cases: 195 https://www.cdc.gov/coronavirus/2019-ncov/transmission/variant-cases.html

Sequences for the two family members described below have not been released. They will be assigned UNK numbers which will be updated when released. USA/CT-Yale-UNK155/2021 New Haven Connecticut USA/CT-Yale-UNK154/2021 New Haven Connecticut USA/CT-Yale-S256/2021 1/5 Connecticut USA/CT-Yale-S131/2021 1/16 Connecticut The Connecticut Department of Public Health and the State Public Health Laboratory have confirmed that two more cases of the UK variant of COVID-19 have been detected in Connecticut. Both of the newly identified cases are family members of one of the initial two individuals who were identified earlier this month. https://connect…

The sequence for the Cobb County B.1.1.7 variant described below has not been released. It will be assigned an UNK number which will be updated when released. USA/GA-CDC-STM-UNK153/2021 Cobb County Georgia The new COVID-19 variant originating from the United Kingdom has appeared in Cobb County, public health officials said. https://patch.com/georgia/buford/s/he92z/hank-aaron-unemployment-down-covid-19-variant-news-nearby?utm_source=twitter.com&utm_medium=social&utm_term=community+corner&utm_campaign=autopost&utm_content=buford

Sequences for the two B.1.1.7 cases described below have not been released. they will be assigned UNK numbers which will be updated when released. USA/TN-CDC-STM-UNK151/2021 Tennessee USA/TN-CDC-STM-UNK152/2021 Tennessee USA/TN-CDC-8636/2021 1/11 60 Tennessee USA/TN-CDC-8637/2021 1/5 36 Tennessee Tennessee Department of Health has announced two confirmed cases of a more contagious strain of COVID-19 in Tennessee, making the state one of more than 20 states in the country reporting COVID-19 cases caused by variants. According to the Health Department, this is out of a total of seven specimens sent to the CDC for confirmation. Dr. William Scha…

NYCPHL has released a B.1.1.7 SARS CoV2 Sequences (USA/NY-NYCPHL-002359/2021) collected in Central Harlem Jan 11.

Sequences from the Northern NJ case have not been released. A UNK number will be assigned and updated upon publication USA/NJ-CDC-STM-UNK149/2021 New Jersey New Jersey has identified its first two known cases of a more contagious COVID-19 variant that was first detected in the United Kingdom. Another variant case was reported in a young traveler who was staying in northern New Jersey, Persichilli said. The child was tested on Jan. 11 in New York City and is asymptomatic. The local health department is investigating the case. https://www.radio.com/wcbs880/news/local/new-jersey-confirms-2-cases-of-uk-covid-19-variant

Sequences from the Ocean County 60'sM have not been released. A UNK number will be assigned and updated upon publication USA/NJ-CDC-STM-UNK149/2021 Ocean County New Jersey New Jersey has identified its first two known cases of a more contagious COVID-19 variant that was first detected in the United Kingdom. The first case involves an Ocean County resident in his 60s. State Health Commissioner Judith Persichilli said the man had no travel history or a clear exposure to others who were ill. He developed symptoms on Dec. 29 and was tested on Jan. 6. Persichilli said his PCR test showed results suggestive of the variant and the sample was sent to a la…

The B.1.1.7 sequences cited below have not been released. Upon release the UNK numbers will be updated USA/NY-Wadsworth-UNK147/2021 Westchester New York USA/NY-Wadsworth-UNK148/2021 Westchester New York NY-Wadsworth-21006732-01/2021 1/3 28M Westchester County New York NY-Wadsworth-21006125-01/2021 1/5 44F Westchester County New York

The B.1.1.7 sequence cited below have not been released. Upon release the UNK number will be updated USA/NY-Wadsworth-UNK146/2021 Brooklyn New York USA/NY-Wadsworth-21006731-01/2021 1/3 44M Kings County

The 12 sequences described below from Bontoc have not been released. They will be assigned UNK numbers which will be updated when released. Philippines/PH-RITM-UNK134/2021 Bontoc Philippines/PH-RITM-UNK135/2021 Bontoc Philippines/PH-RITM-UNK136/2021 Bontoc Philippines/PH-RITM-UNK137/2021 Bontoc Philippines/PH-RITM-UNK138/2021 Bontoc Philippines/PH-RITM-UNK139/2021 Bontoc Philippines/PH-RITM-UNK140/2021 Bontoc Philippines/PH-RITM-UNK141/2021 Bontoc Philippines/PH-RITM-UNK142/2021 Bontoc Philippines/PH-RITM-UNK143/2021 Bontoc Philippines/PH-RITM-UNK144/2021 Bontoc Philippines/PH-RITM-UNK145/2021 Bontoc

The sequence described below has not been released. It will be assigned a UNK number, which will be updated upon release. Philippines/PH-RITM-UNK133/2021 Quezon City The Philippines has detected its first case of a more contagious variant of the coronavirus first reported in Britain, the Health Ministry reported on Wednesday (Jan 13) night. The British variant – officially known at VUI-202012/01 or lineage B117 – was found in a 29-year-old real estate agent living Quezon City in the capital region who went to the United Arab Emirates for business from Dec 27 to Jan 7, the ministry said in a statement. He tested positive a day after arriving bac…

BTC, Khalifa University has released (at GISAID) five 501.v2 SARS-CoV2 Variant sequences (United Arab Emirates/4359/2020, United Arab Emirates/4359/2020, United Arab Emirates/4303/2020, United Arab Emirates/2255/2020, United Arab Emirates/4311/2020) collected in Abu Dhabi Dec 26-29.

Carrington Lab has released (at GISAID) a B.1.1.7 sequence (Trinidad and Tobago/TT2627/2021) collected Dec 12.