Sequences (COVID)

Delaware Public Health Lab has released (at GISAID) three B.1.1.7 variant sequences collected in New Castle Jan 18-19 USA/DE-DHSS-FLW00689767A/2021 1/18 New Castle Delaware USA/DE-DHSS-FLW00689808A/2021 1/19 New Castle Delaware USA/DE-DHSS-FLW00689861A/2021 1/19 New Castle Delaware

COG-UK has released (at GISAID) a 501.v2 (B.1.351) variant sequence collected on Jan 16 in Wales Wales/PHWC-4BC6A3/2021 1/16 Wales

COG-UK has released (at GISAID) two B.1.1.7 variant sequences collected in London Jan 6-21 England/LOND-13266A2/2021 1/6 London England England/LOND-13266B1/2021 1/21 London England

COG-UK has released (at GISAID) two 501.v2 (B.1.351) variant sequences collected on Jan 22 in Glasgow England/QEUH-10F0ECA/2021 1/22 Glasgow England/QEUH-10EF356/2021 1/22 Glasgow

France SUD has released two P.1 (Brazil) variant sequences from Cluses collected Jan 25 France/ARA-0011082/2021 48F 1/25 Cluses ex-Brazil France/ARA-0011076/2021 47M 1/25 Cluses ex-Brazil

Baylor Scott & White-Temple has released (at GISAID) a B.1.1.7 variant sequence collected Jan 16 in Austin USA/TX-BSWTemple-ST43060/2021 1/16 29M Austin

Quest has released (at GISAID) a B.1.1.7 variant sequence collected Jan 14 in California USA/CA-QDX-4373/2021 1/14 59F California

Innovative Genomics Institute has released (at GISAID) two B.1.1.7 variant sequences collected Jan 19-21 in Alameda County USA/CA-IGI-2896/2021 1/19 Alameda County USA/CA-IGI-2897/2021 1/21 Alameda County

LACPHL has released (at GISAID) a B.1.1.7 variant sequence collected Jan 20 in Los Angeles County USA/CA-LACPHL-AF00299/2021 1/20 Los Angeles County California

COG-UK has released (at GISAID) three B.1.1.7 variant sequences collected Jan 18 in Cambridge. England/CAMC-10A0F20/2021 1/18 Cambridge

Santa Clara County Public Health Department has released (at GISAID) a B.1.1.7 variant sequence collected Jan 23 in Santa Clara County. USA/CA-SC210058/2021 1/23 Santa Clara County California

Santa Clara County Public Health Department has released (at GISAID) a B.1.1.7 variant sequence collected Jan 17 in Santa Clara County. USA/CA-SC210056/2021 1/17 Santa Clara County California

France SUD has released a P.1 (Brazil) variant sequence from Marseille collected Jan 22 France/PAC-b0004089/2021 26F 1/22 Marseille

USAF School of Aerospace Medicine has released a P.1 (Brazil) variant sequence from Oklahoma USA/OK-USAFSAM-S0004/2021 1/11 20F Oklahoma

Minnesota Department of Health has released (at GISAID) a P.1 (Brazil) variant sequence collected on Jan 11. USA/MN-MDH-2575/2021 1/11 Minnesota

COG-UK has released (at GISAID) three B.1.1.7 variant sequences collected Jan 16. England/CAMC-106F28E/2021 1/16 Cambridge England England/CAMC-106F1BE/2021 1/16 Cambridge England

COG-UK has released (at GISAID) three B.1.1.7 variant sequences collected Jan 17-19. England/ALDP-10E21B3/2021 1/17 England/ALDP-10E2001/2021 1/19 England/ALDP-10E2010/2021 1/19

Johns Hopkins Hospital has released (at GISAID) two 501.v2 (B.1.351) variant sequences in Maryland collected Jan 25-27 USA/MD-HP01648/2021 1/27 46M Maryland USA/MD-HP01567/2021 1/25 84F Maryland

Johns Hopkins Hospital has released (at GISAID) two B.1.1.7 variant sequences collected Jan 17-27. USA/MD-HP01401/2021 1/17 77F Maryland USA/MD-HP01649/2021 1/27 50F Maryland

McMaster University has released (at GISAID) two B.1.1.7 variant sequences collected Jan 13-19 in Toronto. Canada/ON-S2122/2021 1/13 Toronto Canada/ON-S2124/2021 1/19 Toronto

The sequence from the case described below has not been released. It will be assigned a UNK number and will be updated upon release. Canada/ON-PHL-21-UNK440/2021 Mississauga Ontario Canada The Ontario government has announced the first known case of the South African coronavirus variant and officials say there is no known link to travel. Dr. David Williams, the province’s chief medical officer of health, said Monday afternoon that the case — which is still under investigation — involves a resident in Peel Region who hasn’t recently travelled or come into contact with someone who has travelled. https://globalnews.ca/news/7612626/coronavir…

Sequences for the Markham cases have not been released. They will be assigned UNK numbers, which will be updated upon release. Canada/ON-PHL-21-UNK432/2021 Markham Ontario Canada Canada/ON-PHL-21-UNK433/2021 Markham Ontario Canada Canada/ON-PHL-21-UNK434/2021 Markham Ontario Canada Canada/ON-PHL-21-UNK435/2021 Markham Ontario Canada Canada/ON-PHL-21-UNK436/2021 Markham Ontario Canada Canada/ON-PHL-21-UNK437/2021 Markham Ontario Canada Canada/ON-PHL-21-UNK438/2021 Markham Ontario Canada Canada/ON-PHL-21-UNK439/2021 Markham Ontario Canada The U.K. COVID-19 variant has been confirmed in 39 cases across York Region, according to the municipalit…

Sequences for the Vaughan cases have not been released. They will be assigned UNK numbers, which will be updated upon release. Canada/ON-PHL-21-UNK422/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK423/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK424/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK425/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK426/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK427/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK428/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK429/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK430/2021Vaughan Ontario Canada Canada/ON-PHL-21-UNK431/2021Vaughan Ontario Canada The U.K…

Sequences for the Richmond Hill cases have not been released. They will be assigned UNK numbers, which will be updated upon release. Canada/ON-PHL-21-UNK418/2021/Richmond Hill Ontario Canada Canada/ON-PHL-21-UNK419/2021/Richmond Hill Ontario Canada Canada/ON-PHL-21-UNK420/2021/Richmond Hill Ontario Canada Canada/ON-PHL-21-UNK421/2021/Richmond Hill Ontario Canada The U.K. COVID-19 variant has been confirmed in 39 cases across York Region, according to the municipality. Three cases were detected in Newmarket, four in Georgina and King, five in Richmond Hill, and the most infections were recorded in Vaughan, with 12, and Markham with 11. The…

Sequences for the Newmarket cases have not been released. They will be assigned UNK numbers, which will be updated upon release. Canada/ON-PHL-21-UNK415/2021Newmarket Ontario Canada Canada/ON-PHL-21-UNK416/2021Newmarket Ontario Canada Canada/ON-PHL-21-UNK417/2021Newmarket Ontario Canada The U.K. COVID-19 variant has been confirmed in 39 cases across York Region, according to the municipality. Three cases were detected in Newmarket, four in Georgina and King, five in Richmond Hill, and the most infections were recorded in Vaughan, with 12, and Markham with 11. The municipality reports the cases are linked to 24 households, with close contact…